Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0018620 | XP_013467304.1 | 100.000 | 96 | 0 | 0 | 1 | 96 | 1 | 96 | 8.64e-63 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0018620 | 0.821845 | 3.250624e-53 | -8.615850e-47 |
| Msa0004540 | Msa0018620 | 0.805244 | 1.465805e-49 | -8.615850e-47 |
| Msa0006550 | Msa0018620 | 0.804437 | 2.161478e-49 | -8.615850e-47 |
| Msa0006880 | Msa0018620 | 0.808424 | 3.118525e-50 | -8.615850e-47 |
| Msa0008410 | Msa0018620 | 0.827042 | 1.945955e-54 | -8.615850e-47 |
| Msa0015300 | Msa0018620 | 0.804149 | 2.481338e-49 | -8.615850e-47 |
| Msa0018620 | Msa0027390 | 0.804676 | 1.926797e-49 | -8.615850e-47 |
| Msa0018620 | Msa0032260 | 0.833054 | 6.648870e-56 | -8.615850e-47 |
| Msa0018620 | Msa0033880 | 0.828887 | 7.000157e-55 | -8.615850e-47 |
| Msa0018620 | Msa0044020 | 0.822874 | 1.874953e-53 | -8.615850e-47 |
| Msa0018620 | Msa0048180 | 0.813718 | 2.221082e-51 | -8.615850e-47 |
| Msa0018620 | Msa0055150 | 0.830458 | 2.903674e-55 | -8.615850e-47 |
| Msa0018620 | Msa0057140 | 0.807174 | 5.750674e-50 | -8.615850e-47 |
| Msa0018620 | Msa0061970 | 0.815180 | 1.054809e-51 | -8.615850e-47 |
| Msa0018620 | Msa0069330 | 0.801844 | 7.431842e-49 | -8.615850e-47 |
| Msa0018620 | Msa0074320 | 0.812550 | 4.006376e-51 | -8.615850e-47 |
| Msa0018620 | Msa0076000 | 0.891316 | 4.438377e-74 | -8.615850e-47 |
| Msa0018620 | Msa0076040 | 0.822243 | 2.628535e-53 | -8.615850e-47 |
| Msa0018620 | Msa0077540 | 0.805354 | 1.390342e-49 | -8.615850e-47 |
| Msa0018620 | Msa0081650 | 0.809725 | 1.641443e-50 | -8.615850e-47 |
| Msa0018620 | Msa0082280 | 0.811873 | 5.631039e-51 | -8.615850e-47 |
| Msa0018620 | Msa0090590 | 0.809760 | 1.613835e-50 | -8.615850e-47 |
| Msa0018620 | Msa0094120 | 0.812211 | 4.752370e-51 | -8.615850e-47 |
| Msa0018620 | Msa0094920 | 0.824697 | 7.013638e-54 | -8.615850e-47 |
| Msa0018620 | Msa0094950 | 0.817077 | 3.974887e-52 | -8.615850e-47 |
| Msa0018620 | Msa0097600 | 0.806398 | 8.388035e-50 | -8.615850e-47 |
| Msa0018620 | Msa0100000 | 0.803204 | 3.898104e-49 | -8.615850e-47 |
| Msa0018620 | Msa0100800 | 0.824911 | 6.243305e-54 | -8.615850e-47 |
| Msa0018620 | Msa0113970 | 0.808757 | 2.647720e-50 | -8.615850e-47 |
| Msa0018620 | Msa0115370 | 0.806398 | 8.388035e-50 | -8.615850e-47 |
| Msa0018620 | Msa0121590 | 0.805138 | 1.543054e-49 | -8.615850e-47 |
| Msa0018620 | Msa0121820 | 0.815646 | 8.308225e-52 | -8.615850e-47 |
| Msa0018620 | Msa0124340 | 0.803302 | 3.719895e-49 | -8.615850e-47 |
| Msa0018620 | Msa0127310 | 0.819365 | 1.206621e-52 | -8.615850e-47 |
| Msa0018620 | Msa0127850 | 0.830864 | 2.310088e-55 | -8.615850e-47 |
| Msa0018620 | Msa0128860 | 0.805420 | 1.346510e-49 | -8.615850e-47 |
| Msa0018620 | Msa0137610 | -0.800229 | 1.589763e-48 | -8.615850e-47 |
| Msa0018620 | Msa0140960 | 0.802556 | 5.303804e-49 | -8.615850e-47 |
| Msa0018620 | Msa0145150 | 0.801113 | 1.049486e-48 | -8.615850e-47 |
| Msa0018620 | Msa0148100 | 0.814468 | 1.517239e-51 | -8.615850e-47 |
| Msa0018620 | Msa0149000 | 0.854492 | 1.187424e-61 | -8.615850e-47 |
| Msa0018620 | Msa0149390 | 0.806729 | 7.140960e-50 | -8.615850e-47 |
| Msa0018620 | Msa0165300 | 0.803063 | 4.169042e-49 | -8.615850e-47 |
| Msa0018620 | Msa0166750 | 0.826028 | 3.395342e-54 | -8.615850e-47 |
| Msa0018620 | Msa0167480 | 0.800445 | 1.436239e-48 | -8.615850e-47 |
| Msa0018620 | Msa0171850 | 0.801618 | 8.270743e-49 | -8.615850e-47 |
| Msa0018620 | Msa0174000 | 0.825530 | 4.458950e-54 | -8.615850e-47 |
| Msa0018620 | Msa0174730 | 0.805133 | 1.546249e-49 | -8.615850e-47 |
| Msa0018620 | Msa0174770 | 0.823059 | 1.698610e-53 | -8.615850e-47 |
| Msa0018620 | Msa0181610 | 0.834559 | 2.794906e-56 | -8.615850e-47 |
| Msa0018620 | Msa0183830 | 0.811101 | 8.284545e-51 | -8.615850e-47 |
| Msa0018620 | Msa0183900 | 0.808160 | 3.550631e-50 | -8.615850e-47 |
| Msa0018620 | Msa0184020 | 0.802161 | 6.397949e-49 | -8.615850e-47 |
| Msa0018620 | Msa0185400 | 0.811640 | 6.328251e-51 | -8.615850e-47 |
| Msa0018620 | Msa0185590 | 0.809664 | 1.692247e-50 | -8.615850e-47 |
| Msa0018620 | Msa0186890 | 0.852601 | 4.146720e-61 | -8.615850e-47 |
| Msa0018620 | Msa0187690 | 0.804903 | 1.727552e-49 | -8.615850e-47 |
| Msa0018620 | Msa0187930 | 0.839417 | 1.604405e-57 | -8.615850e-47 |
| Msa0018620 | Msa0194540 | 0.845305 | 4.412050e-59 | -8.615850e-47 |
| Msa0018620 | Msa0197420 | 0.803825 | 2.896917e-49 | -8.615850e-47 |
| Msa0018620 | Msa0197520 | 0.820532 | 6.525962e-53 | -8.615850e-47 |
| Msa0018620 | Msa0197780 | 0.809630 | 1.720871e-50 | -8.615850e-47 |
| Msa0018620 | Msa0199690 | 0.849118 | 3.970032e-60 | -8.615850e-47 |
| Msa0018620 | Msa0204980 | 0.808476 | 3.039223e-50 | -8.615850e-47 |
| Msa0018620 | Msa0211840 | 0.801612 | 8.295376e-49 | -8.615850e-47 |
| Msa0018620 | Msa0225180 | 0.817154 | 3.820440e-52 | -8.615850e-47 |
| Msa0018620 | Msa0225740 | 0.821161 | 4.677333e-53 | -8.615850e-47 |
| Msa0018620 | Msa0227400 | 0.831572 | 1.547173e-55 | -8.615850e-47 |
| Msa0018620 | Msa0231880 | 0.868993 | 4.319981e-66 | -8.615850e-47 |
| Msa0018620 | Msa0239450 | 0.814845 | 1.251948e-51 | -8.615850e-47 |
| Msa0018620 | Msa0239800 | 0.800565 | 1.357530e-48 | -8.615850e-47 |
| Msa0018620 | Msa0242230 | 0.826471 | 2.663470e-54 | -8.615850e-47 |
| Msa0018620 | Msa0244780 | 0.834407 | 3.051121e-56 | -8.615850e-47 |
| Msa0018620 | Msa0254790 | 0.800738 | 1.251858e-48 | -8.615850e-47 |
| Msa0018620 | Msa0256840 | 0.807535 | 4.820392e-50 | -8.615850e-47 |
| Msa0018620 | Msa0260210 | 0.820045 | 8.441701e-53 | -8.615850e-47 |
| Msa0018620 | Msa0260240 | 0.814107 | 1.822943e-51 | -8.615850e-47 |
| Msa0018620 | Msa0260280 | 0.816025 | 6.838457e-52 | -8.615850e-47 |
| Msa0018620 | Msa0262310 | 0.802314 | 5.948564e-49 | -8.615850e-47 |
| Msa0018620 | Msa0264570 | 0.802811 | 4.699913e-49 | -8.615850e-47 |
| Msa0018620 | Msa0264930 | 0.810827 | 9.495483e-51 | -8.615850e-47 |
| Msa0018620 | Msa0268130 | 0.841349 | 5.014444e-58 | -8.615850e-47 |
| Msa0018620 | Msa0276920 | 0.804578 | 2.019282e-49 | -8.615850e-47 |
| Msa0018620 | Msa0280430 | 0.832594 | 8.646479e-56 | -8.615850e-47 |
| Msa0018620 | Msa0282890 | 0.810870 | 9.294990e-51 | -8.615850e-47 |
| Msa0018620 | Msa0287310 | 0.810741 | 9.915592e-51 | -8.615850e-47 |
| Msa0018620 | Msa0291520 | 0.855345 | 6.716307e-62 | -8.615850e-47 |
| Msa0018620 | Msa0298990 | 0.832265 | 1.043504e-55 | -8.615850e-47 |
| Msa0018620 | Msa0300120 | 0.804468 | 2.129056e-49 | -8.615850e-47 |
| Msa0018620 | Msa0302980 | 0.820203 | 7.765623e-53 | -8.615850e-47 |
| Msa0018620 | Msa0304260 | 0.801381 | 9.248549e-49 | -8.615850e-47 |
| Msa0018620 | Msa0304290 | 0.821677 | 3.555813e-53 | -8.615850e-47 |
| Msa0018620 | Msa0304330 | 0.821301 | 4.341277e-53 | -8.615850e-47 |
| Msa0018620 | Msa0304590 | 0.803786 | 2.952725e-49 | -8.615850e-47 |
| Msa0018620 | Msa0304660 | 0.805393 | 1.364392e-49 | -8.615850e-47 |
| Msa0018620 | Msa0305890 | 0.814132 | 1.799755e-51 | -8.615850e-47 |
| Msa0018620 | Msa0310410 | 0.822252 | 2.615869e-53 | -8.615850e-47 |
| Msa0018620 | Msa0316800 | 0.803931 | 2.754548e-49 | -8.615850e-47 |
| Msa0018620 | Msa0316910 | 0.815088 | 1.105650e-51 | -8.615850e-47 |
| Msa0018620 | Msa0321190 | 0.817041 | 4.050716e-52 | -8.615850e-47 |
| Msa0018620 | Msa0325850 | 0.806465 | 8.120524e-50 | -8.615850e-47 |
| Msa0018620 | Msa0329320 | 0.819425 | 1.169451e-52 | -8.615850e-47 |
| Msa0018620 | Msa0331700 | 0.806898 | 6.577916e-50 | -8.615850e-47 |
| Msa0018620 | Msa0333920 | 0.811293 | 7.526031e-51 | -8.615850e-47 |
| Msa0018620 | Msa0334040 | 0.825749 | 3.954695e-54 | -8.615850e-47 |
| Msa0018620 | Msa0339250 | 0.806796 | 6.912788e-50 | -8.615850e-47 |
| Msa0018620 | Msa0340810 | 0.810996 | 8.729232e-51 | -8.615850e-47 |
| Msa0018620 | Msa0355270 | 0.870407 | 1.493733e-66 | -8.615850e-47 |
| Msa0018620 | Msa0366240 | 0.810323 | 1.220378e-50 | -8.615850e-47 |
| Msa0018620 | Msa0369050 | 0.820785 | 5.708759e-53 | -8.615850e-47 |
| Msa0018620 | Msa0372660 | 0.810187 | 1.305876e-50 | -8.615850e-47 |
| Msa0018620 | Msa0372670 | 0.800119 | 1.673479e-48 | -8.615850e-47 |
| Msa0018620 | Msa0376690 | 0.818301 | 2.104929e-52 | -8.615850e-47 |
| Msa0018620 | Msa0384880 | 0.804247 | 2.367941e-49 | -8.615850e-47 |
| Msa0018620 | Msa0387730 | 0.806083 | 9.771998e-50 | -8.615850e-47 |
| Msa0018620 | Msa0394400 | 0.803509 | 3.370241e-49 | -8.615850e-47 |
| Msa0018620 | Msa0402330 | 0.862054 | 6.648306e-64 | -8.615850e-47 |
| Msa0018620 | Msa0413450 | 0.812781 | 3.566168e-51 | -8.615850e-47 |
| Msa0018620 | Msa0415810 | 0.807027 | 6.175901e-50 | -8.615850e-47 |
| Msa0018620 | Msa0416400 | 0.808058 | 3.732322e-50 | -8.615850e-47 |
| Msa0018620 | Msa0423900 | 0.804744 | 1.865157e-49 | -8.615850e-47 |
| Msa0018620 | Msa0426330 | 0.804387 | 2.213764e-49 | -8.615850e-47 |
| Msa0018620 | Msa0453690 | 0.815093 | 1.102741e-51 | -8.615850e-47 |
| Msa0018620 | Msa0460930 | 0.806753 | 7.058117e-50 | -8.615850e-47 |
| Msa0018620 | Msa0471590 | 0.824778 | 6.713403e-54 | -8.615850e-47 |
| Msa0018620 | Msa0474950 | 0.804667 | 1.934978e-49 | -8.615850e-47 |
| Msa0018620 | Msa0490750 | 0.811142 | 8.116247e-51 | -8.615850e-47 |
| Msa0018620 | Msa0508590 | 0.804816 | 1.801536e-49 | -8.615850e-47 |
| Msa0018620 | Msa0508630 | 0.816330 | 5.845735e-52 | -8.615850e-47 |
| Msa0018620 | Msa0513440 | 0.823717 | 1.191638e-53 | -8.615850e-47 |
| Msa0018620 | Msa0514180 | 0.802090 | 6.615278e-49 | -8.615850e-47 |
| Msa0018620 | Msa0515640 | 0.809465 | 1.867385e-50 | -8.615850e-47 |
| Msa0018620 | Msa0526540 | 0.832327 | 1.006951e-55 | -8.615850e-47 |
| Msa0018620 | Msa0526890 | 0.846793 | 1.737822e-59 | -8.615850e-47 |
| Msa0018620 | Msa0532980 | 0.804010 | 2.652395e-49 | -8.615850e-47 |
| Msa0018620 | Msa0541860 | 0.852541 | 4.313322e-61 | -8.615850e-47 |
| Msa0018620 | Msa0546360 | 0.823706 | 1.198912e-53 | -8.615850e-47 |
| Msa0018620 | Msa0547720 | 0.808814 | 2.574740e-50 | -8.615850e-47 |
| Msa0018620 | Msa0552810 | 0.843902 | 1.053115e-58 | -8.615850e-47 |
| Msa0018620 | Msa0556790 | 0.820614 | 6.250363e-53 | -8.615850e-47 |
| Msa0018620 | Msa0556860 | 0.821492 | 3.923936e-53 | -8.615850e-47 |
| Msa0018620 | Msa0557070 | 0.806570 | 7.713712e-50 | -8.615850e-47 |
| Msa0018620 | Msa0561430 | 0.823105 | 1.656863e-53 | -8.615850e-47 |
| Msa0018620 | Msa0568820 | 0.828509 | 8.641479e-55 | -8.615850e-47 |
| Msa0018620 | Msa0576680 | 0.800319 | 1.523618e-48 | -8.615850e-47 |
| Msa0018620 | Msa0576940 | 0.826651 | 2.413882e-54 | -8.615850e-47 |
| Msa0018620 | Msa0577220 | 0.800554 | 1.364749e-48 | -8.615850e-47 |
| Msa0018620 | Msa0581070 | 0.856390 | 3.323960e-62 | -8.615850e-47 |
| Msa0018620 | Msa0585960 | 0.804312 | 2.294760e-49 | -8.615850e-47 |
| Msa0018620 | Msa0610390 | 0.822281 | 2.576459e-53 | -8.615850e-47 |
| Msa0018620 | Msa0615440 | 0.802587 | 5.228224e-49 | -8.615850e-47 |
| Msa0018620 | Msa0616020 | 0.832405 | 9.634114e-56 | -8.615850e-47 |
| Msa0018620 | Msa0619070 | 0.836689 | 8.079124e-57 | -8.615850e-47 |
| Msa0018620 | Msa0620230 | 0.809965 | 1.457944e-50 | -8.615850e-47 |
| Msa0018620 | Msa0620620 | 0.816756 | 4.693377e-52 | -8.615850e-47 |
| Msa0018620 | Msa0620990 | 0.814916 | 1.207423e-51 | -8.615850e-47 |
| Msa0018620 | Msa0623700 | 0.858818 | 6.342786e-63 | -8.615850e-47 |
| Msa0018620 | Msa0638070 | 0.819052 | 1.422057e-52 | -8.615850e-47 |
| Msa0018620 | Msa0639120 | 0.800152 | 1.648016e-48 | -8.615850e-47 |
| Msa0018620 | Msa0650920 | 0.825544 | 4.425182e-54 | -8.615850e-47 |
| Msa0018620 | Msa0652300 | 0.828676 | 7.875824e-55 | -8.615850e-47 |
| Msa0018620 | Msa0652450 | 0.810055 | 1.393837e-50 | -8.615850e-47 |
| Msa0018620 | Msa0654870 | 0.827084 | 1.901727e-54 | -8.615850e-47 |
| Msa0018620 | Msa0661090 | 0.824573 | 7.501610e-54 | -8.615850e-47 |
| Msa0018620 | Msa0663900 | 0.815841 | 7.519394e-52 | -8.615850e-47 |
| Msa0018620 | Msa0669760 | 0.806851 | 6.730078e-50 | -8.615850e-47 |
| Msa0018620 | Msa0677410 | 0.802621 | 5.144467e-49 | -8.615850e-47 |
| Msa0018620 | Msa0680240 | 0.839302 | 1.718390e-57 | -8.615850e-47 |
| Msa0018620 | Msa0682780 | 0.842017 | 3.342865e-58 | -8.615850e-47 |
| Msa0018620 | Msa0686080 | 0.817560 | 3.096136e-52 | -8.615850e-47 |
| Msa0018620 | Msa0687020 | 0.805787 | 1.127892e-49 | -8.615850e-47 |
| Msa0018620 | Msa0687630 | 0.839286 | 1.735282e-57 | -8.615850e-47 |
| Msa0018620 | Msa0692840 | 0.811006 | 8.685470e-51 | -8.615850e-47 |
| Msa0018620 | Msa0692940 | 0.815464 | 9.123655e-52 | -8.615850e-47 |
| Msa0018620 | Msa0694840 | 0.814539 | 1.463206e-51 | -8.615850e-47 |
| Msa0018620 | Msa0696450 | 0.815073 | 1.114435e-51 | -8.615850e-47 |
| Msa0018620 | Msa0698490 | 0.800037 | 1.738859e-48 | -8.615850e-47 |
| Msa0018620 | Msa0698660 | 0.805915 | 1.059785e-49 | -8.615850e-47 |
| Msa0018620 | Msa0703230 | 0.849217 | 3.725858e-60 | -8.615850e-47 |
| Msa0018620 | Msa0705000 | 0.806016 | 1.009319e-49 | -8.615850e-47 |
| Msa0018620 | Msa0705040 | 0.812360 | 4.408535e-51 | -8.615850e-47 |
| Msa0018620 | Msa0708520 | 0.810156 | 1.325768e-50 | -8.615850e-47 |
| Msa0018620 | Msa0713820 | 0.815757 | 7.848912e-52 | -8.615850e-47 |
| Msa0018620 | Msa0726080 | 0.802775 | 4.779377e-49 | -8.615850e-47 |
| Msa0018620 | Msa0730000 | 0.803177 | 3.948559e-49 | -8.615850e-47 |
| Msa0018620 | Msa0738100 | 0.804879 | 1.747774e-49 | -8.615850e-47 |
| Msa0018620 | Msa0744030 | 0.805894 | 1.070940e-49 | -8.615850e-47 |
| Msa0018620 | Msa0745200 | 0.812242 | 4.678871e-51 | -8.615850e-47 |
| Msa0018620 | Msa0750880 | 0.825167 | 5.433358e-54 | -8.615850e-47 |
| Msa0018620 | Msa0750920 | 0.836506 | 8.990784e-57 | -8.615850e-47 |
| Msa0018620 | Msa0777990 | 0.802884 | 4.539438e-49 | -8.615850e-47 |
| Msa0018620 | Msa0784380 | 0.816969 | 4.204632e-52 | -8.615850e-47 |
| Msa0018620 | Msa0797750 | 0.806870 | 6.667249e-50 | -8.615850e-47 |
| Msa0018620 | Msa0797930 | 0.802890 | 4.525860e-49 | -8.615850e-47 |
| Msa0018620 | Msa0814250 | 0.828237 | 1.005228e-54 | -8.615850e-47 |
| Msa0018620 | Msa0814320 | 0.814757 | 1.309652e-51 | -8.615850e-47 |
| Msa0018620 | Msa0826760 | 0.813163 | 2.942097e-51 | -8.615850e-47 |
| Msa0018620 | Msa0827280 | 0.803167 | 3.966541e-49 | -8.615850e-47 |
| Msa0018620 | Msa0841940 | 0.804719 | 1.887598e-49 | -8.615850e-47 |
| Msa0018620 | Msa0850960 | 0.810722 | 1.000762e-50 | -8.615850e-47 |
| Msa0018620 | Msa0863370 | 0.804891 | 1.737214e-49 | -8.615850e-47 |
| Msa0018620 | Msa0864010 | 0.800635 | 1.313863e-48 | -8.615850e-47 |
| Msa0018620 | Msa0865570 | 0.827760 | 1.309183e-54 | -8.615850e-47 |
| Msa0018620 | Msa0876200 | 0.854347 | 1.307446e-61 | -8.615850e-47 |
| Msa0018620 | Msa0881020 | 0.805924 | 1.055271e-49 | -8.615850e-47 |
| Msa0018620 | Msa0881030 | 0.826865 | 2.145805e-54 | -8.615850e-47 |
| Msa0018620 | Msa0888940 | 0.820597 | 6.304719e-53 | -8.615850e-47 |
| Msa0018620 | Msa0896290 | 0.803206 | 3.894203e-49 | -8.615850e-47 |
| Msa0018620 | Msa0898760 | 0.841503 | 4.568926e-58 | -8.615850e-47 |
| Msa0018620 | Msa0899290 | 0.839945 | 1.169580e-57 | -8.615850e-47 |
| Msa0018620 | Msa0902760 | 0.819129 | 1.365803e-52 | -8.615850e-47 |
| Msa0018620 | Msa0928120 | 0.833612 | 4.825837e-56 | -8.615850e-47 |
| Msa0018620 | Msa0943170 | 0.819626 | 1.051983e-52 | -8.615850e-47 |
| Msa0018620 | Msa0944660 | 0.818712 | 1.698847e-52 | -8.615850e-47 |
| Msa0018620 | Msa0966270 | 0.808496 | 3.009883e-50 | -8.615850e-47 |
| Msa0018620 | Msa0967370 | 0.837932 | 3.881914e-57 | -8.615850e-47 |
| Msa0018620 | Msa0970030 | 0.802810 | 4.702403e-49 | -8.615850e-47 |
| Msa0018620 | Msa0970420 | 0.808816 | 2.572176e-50 | -8.615850e-47 |
| Msa0018620 | Msa0980940 | 0.819964 | 8.807934e-53 | -8.615850e-47 |
| Msa0018620 | Msa0986920 | 0.814771 | 1.300076e-51 | -8.615850e-47 |
| Msa0018620 | Msa0997430 | 0.820007 | 8.611460e-53 | -8.615850e-47 |
| Msa0018620 | Msa1006840 | 0.824531 | 7.675406e-54 | -8.615850e-47 |
| Msa0018620 | Msa1013400 | 0.823885 | 1.088616e-53 | -8.615850e-47 |
| Msa0018620 | Msa1019240 | 0.810307 | 1.230012e-50 | -8.615850e-47 |
| Msa0018620 | Msa1019260 | 0.811431 | 7.026311e-51 | -8.615850e-47 |
| Msa0018620 | Msa1025940 | 0.810947 | 8.944146e-51 | -8.615850e-47 |
| Msa0018620 | Msa1040890 | 0.813475 | 2.512162e-51 | -8.615850e-47 |
| Msa0018620 | Msa1041520 | 0.827844 | 1.249847e-54 | -8.615850e-47 |
| Msa0018620 | Msa1046020 | 0.800489 | 1.406841e-48 | -8.615850e-47 |
| Msa0018620 | Msa1050200 | 0.806667 | 7.361361e-50 | -8.615850e-47 |
| Msa0018620 | Msa1081150 | 0.835024 | 2.134995e-56 | -8.615850e-47 |
| Msa0018620 | Msa1081560 | 0.810961 | 8.883817e-51 | -8.615850e-47 |
| Msa0018620 | Msa1082700 | 0.808883 | 2.488440e-50 | -8.615850e-47 |
| Msa0018620 | Msa1083210 | 0.828532 | 8.530822e-55 | -8.615850e-47 |
| Msa0018620 | Msa1083880 | 0.805392 | 1.364639e-49 | -8.615850e-47 |
| Msa0018620 | Msa1089840 | 0.818808 | 1.615921e-52 | -8.615850e-47 |
| Msa0018620 | Msa1093530 | 0.814455 | 1.527437e-51 | -8.615850e-47 |
| Msa0018620 | Msa1101580 | 0.800383 | 1.478586e-48 | -8.615850e-47 |
| Msa0018620 | Msa1101600 | 0.802832 | 4.652305e-49 | -8.615850e-47 |
| Msa0018620 | Msa1104140 | 0.828267 | 9.888304e-55 | -8.615850e-47 |
| Msa0018620 | Msa1111810 | 0.806919 | 6.509696e-50 | -8.615850e-47 |
| Msa0018620 | Msa1124070 | 0.804300 | 2.307690e-49 | -8.615850e-47 |
| Msa0018620 | Msa1126510 | 0.835746 | 1.402671e-56 | -8.615850e-47 |
| Msa0018620 | Msa1126770 | 0.856895 | 2.361303e-62 | -8.615850e-47 |
| Msa0018620 | Msa1127130 | 0.803185 | 3.932881e-49 | -8.615850e-47 |
| Msa0018620 | Msa1127830 | 0.855382 | 6.548282e-62 | -8.615850e-47 |
| Msa0018620 | Msa1127890 | 0.829753 | 4.315177e-55 | -8.615850e-47 |
| Msa0018620 | Msa1139810 | 0.802168 | 6.375841e-49 | -8.615850e-47 |
| Msa0018620 | Msa1147900 | 0.804478 | 2.118671e-49 | -8.615850e-47 |
| Msa0018620 | Msa1151910 | 0.807448 | 5.029467e-50 | -8.615850e-47 |
| Msa0018620 | Msa1154210 | 0.803448 | 3.469351e-49 | -8.615850e-47 |
| Msa0018620 | Msa1165870 | 0.811731 | 6.047152e-51 | -8.615850e-47 |
| Msa0018620 | Msa1166410 | 0.820218 | 7.703363e-53 | -8.615850e-47 |
| Msa0018620 | Msa1166860 | 0.822540 | 2.243384e-53 | -8.615850e-47 |
| Msa0018620 | Msa1166870 | 0.821926 | 3.113769e-53 | -8.615850e-47 |
| Msa0018620 | Msa1174530 | 0.800715 | 1.265537e-48 | -8.615850e-47 |
| Msa0018620 | Msa1179950 | 0.806521 | 7.899047e-50 | -8.615850e-47 |
| Msa0018620 | Msa1179980 | 0.808098 | 3.658843e-50 | -8.615850e-47 |
| Msa0018620 | Msa1184370 | 0.837070 | 6.455922e-57 | -8.615850e-47 |
| Msa0018620 | Msa1187840 | 0.819469 | 1.142908e-52 | -8.615850e-47 |
| Msa0018620 | Msa1193290 | 0.804944 | 1.693714e-49 | -8.615850e-47 |
| Msa0018620 | Msa1201120 | 0.808145 | 3.576275e-50 | -8.615850e-47 |
| Msa0018620 | Msa1201830 | 0.850128 | 2.074557e-60 | -8.615850e-47 |
| Msa0018620 | Msa1204250 | 0.809412 | 1.916606e-50 | -8.615850e-47 |
| Msa0018620 | Msa1207270 | 0.825549 | 4.411520e-54 | -8.615850e-47 |
| Msa0018620 | Msa1207730 | 0.816241 | 6.120404e-52 | -8.615850e-47 |
| Msa0018620 | Msa1218600 | 0.840591 | 7.930415e-58 | -8.615850e-47 |
| Msa0018620 | Msa1224840 | 0.802942 | 4.416024e-49 | -8.615850e-47 |
| Msa0018620 | Msa1227690 | 0.855500 | 6.053377e-62 | -8.615850e-47 |
| Msa0018620 | Msa1231240 | 0.800421 | 1.453012e-48 | -8.615850e-47 |
| Msa0018620 | Msa1234980 | 0.808684 | 2.744561e-50 | -8.615850e-47 |
| Msa0018620 | Msa1235250 | 0.816706 | 4.817068e-52 | -8.615850e-47 |
| Msa0018620 | Msa1235740 | 0.806973 | 6.340244e-50 | -8.615850e-47 |
| Msa0018620 | Msa1237940 | 0.812739 | 3.642519e-51 | -8.615850e-47 |
| Msa0018620 | Msa1251160 | 0.812086 | 5.059345e-51 | -8.615850e-47 |
| Msa0018620 | Msa1252190 | 0.812161 | 4.872587e-51 | -8.615850e-47 |
| Msa0018620 | Msa1254710 | 0.886220 | 4.134911e-72 | -8.615850e-47 |
| Msa0018620 | Msa1255040 | -0.824834 | 6.509942e-54 | -8.615850e-47 |
| Msa0018620 | Msa1257510 | 0.802404 | 5.702282e-49 | -8.615850e-47 |
| Msa0018620 | Msa1267840 | 0.836355 | 9.823312e-57 | -8.615850e-47 |
| Msa0018620 | Msa1269300 | 0.822917 | 1.832225e-53 | -8.615850e-47 |
| Msa0018620 | Msa1270620 | 0.808788 | 2.606929e-50 | -8.615850e-47 |
| Msa0018620 | Msa1270690 | 0.806701 | 7.237845e-50 | -8.615850e-47 |
| Msa0018620 | Msa1276660 | 0.810938 | 8.985125e-51 | -8.615850e-47 |
| Msa0018620 | Msa1283170 | 0.811384 | 7.191697e-51 | -8.615850e-47 |
| Msa0018620 | Msa1286510 | 0.805832 | 1.103280e-49 | -8.615850e-47 |
| Msa0018620 | Msa1290450 | 0.803691 | 3.089110e-49 | -8.615850e-47 |
| Msa0018620 | Msa1292830 | 0.822075 | 2.875873e-53 | -8.615850e-47 |
| Msa0018620 | Msa1294840 | 0.836593 | 8.542922e-57 | -8.615850e-47 |
| Msa0018620 | Msa1295490 | -0.814771 | 1.300138e-51 | -8.615850e-47 |
| Msa0018620 | Msa1306990 | 0.808505 | 2.996869e-50 | -8.615850e-47 |
| Msa0018620 | Msa1307950 | 0.845332 | 4.339677e-59 | -8.615850e-47 |
| Msa0018620 | Msa1310690 | 0.842006 | 3.363976e-58 | -8.615850e-47 |
| Msa0018620 | Msa1316780 | 0.841073 | 5.925533e-58 | -8.615850e-47 |
| Msa0018620 | Msa1316830 | 0.846048 | 2.773765e-59 | -8.615850e-47 |
| Msa0018620 | Msa1333110 | 0.808191 | 3.495797e-50 | -8.615850e-47 |
| Msa0018620 | Msa1335940 | 0.811096 | 8.306172e-51 | -8.615850e-47 |
| Msa0018620 | Msa1340020 | 0.809288 | 2.037347e-50 | -8.615850e-47 |
| Msa0018620 | Msa1341070 | 0.801175 | 1.019422e-48 | -8.615850e-47 |
| Msa0018620 | Msa1344850 | 0.811263 | 7.639323e-51 | -8.615850e-47 |
| Msa0018620 | Msa1345450 | 0.800275 | 1.555833e-48 | -8.615850e-47 |
| Msa0018620 | Msa1353060 | 0.827995 | 1.149895e-54 | -8.615850e-47 |
| Msa0018620 | Msa1356440 | 0.802277 | 6.054809e-49 | -8.615850e-47 |
| Msa0018620 | Msa1361400 | 0.815442 | 9.223401e-52 | -8.615850e-47 |
| Msa0018620 | Msa1361410 | 0.802232 | 6.185987e-49 | -8.615850e-47 |
| Msa0018620 | Msa1363330 | 0.830071 | 3.609071e-55 | -8.615850e-47 |
| Msa0018620 | Msa1365150 | 0.831933 | 1.260380e-55 | -8.615850e-47 |
| Msa0018620 | Msa1367880 | 0.837317 | 5.580955e-57 | -8.615850e-47 |
| Msa0018620 | Msa1369150 | 0.807007 | 6.236080e-50 | -8.615850e-47 |
| Msa0018620 | Msa1370860 | 0.819406 | 1.181107e-52 | -8.615850e-47 |
| Msa0018620 | Msa1372310 | 0.814087 | 1.841706e-51 | -8.615850e-47 |
| Msa0018620 | Msa1373330 | 0.818726 | 1.686589e-52 | -8.615850e-47 |
| Msa0018620 | Msa1376650 | 0.801563 | 8.490012e-49 | -8.615850e-47 |
| Msa0018620 | Msa1379760 | 0.808681 | 2.747965e-50 | -8.615850e-47 |
| Msa0018620 | Msa1385670 | 0.815843 | 7.511065e-52 | -8.615850e-47 |
| Msa0018620 | Msa1386600 | 0.830022 | 3.710023e-55 | -8.615850e-47 |
| Msa0018620 | Msa1387420 | 0.802712 | 4.924592e-49 | -8.615850e-47 |
| Msa0018620 | Msa1397810 | 0.862274 | 5.689556e-64 | -8.615850e-47 |
| Msa0018620 | Msa1404190 | 0.831530 | 1.584480e-55 | -8.615850e-47 |
| Msa0018620 | Msa1427060 | 0.805063 | 1.599696e-49 | -8.615850e-47 |
| Msa0018620 | Msa1435750 | 0.804641 | 1.959729e-49 | -8.615850e-47 |
| Msa0018620 | Msa1438640 | 0.816888 | 4.382922e-52 | -8.615850e-47 |
| Msa0018620 | Msa1442850 | 0.856011 | 4.292926e-62 | -8.615850e-47 |
| Msa0018620 | Msa1443930 | 0.815595 | 8.531197e-52 | -8.615850e-47 |
| Msa0018620 | Msa1448690 | 0.828715 | 7.705481e-55 | -8.615850e-47 |
| Msa0018620 | Msa1450280 | 0.806626 | 7.508649e-50 | -8.615850e-47 |
| Msa0018620 | Msa1461490 | 0.816087 | 6.625708e-52 | -8.615850e-47 |
| Msa0018620 | Msa1465080 | 0.838751 | 2.387815e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0018620 | MtrunA17_Chr1g0170661 | 100.000 | 96 | 0 | 0 | 1 | 96 | 1 | 96 | 7.95e-67 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0018620 | AT1G72020.1 | 69.072 | 97 | 29 | 1 | 1 | 96 | 1 | 97 | 2.53e-45 | 141 |
Find 41 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATCATATTGCATTAATA+TGG | 0.223082 | 1_1:-31482077 | None:intergenic |
| AACAATAATCAGATGGATTT+GGG | 0.242746 | 1_1:+31481789 | Msa0018620:three_prime_UTR |
| CTAGACTAGCATATTGGTTT+TGG | 0.253646 | 1_1:+31481816 | Msa0018620:three_prime_UTR |
| TAACAATAATCAGATGGATT+TGG | 0.267194 | 1_1:+31481788 | Msa0018620:three_prime_UTR |
| GTGAGGGATTTGACCTGATT+TGG | 0.301994 | 1_1:-31478529 | None:intergenic |
| CTTGGACAAGATGAAGTATC+AGG | 0.339393 | 1_1:+31481644 | Msa0018620:CDS |
| TTGATCAAGTTGGTTATTGC+AGG | 0.354339 | 1_1:+31482023 | Msa0018620:three_prime_UTR |
| TGATTATTACAAGAGATATA+TGG | 0.396470 | 1_1:-31481897 | None:intergenic |
| CATCTGATTATTGTTACAAA+TGG | 0.398465 | 1_1:-31481781 | None:intergenic |
| GGGATCCTAGACTAGCATAT+TGG | 0.403278 | 1_1:+31481810 | Msa0018620:three_prime_UTR |
| GAATCCTCCATCTCCAAATC+AGG | 0.426967 | 1_1:+31478516 | Msa0018620:CDS |
| CAGCAAAAGAAGACAGCATC+TGG | 0.440272 | 1_1:+31481741 | Msa0018620:CDS |
| AAGAACCACCACCTGAAAAC+AGG | 0.448093 | 1_1:-31481992 | None:intergenic |
| TTGTTAAGCTTGGCGAAACT+AGG | 0.466604 | 1_1:+31478375 | Msa0018620:five_prime_UTR |
| GAAACACAAATTTCTTTCGA+AGG | 0.478060 | 1_1:+31478412 | Msa0018620:five_prime_UTR |
| GTGTTCACAGCTTTCAGCAT+TGG | 0.501579 | 1_1:+31481687 | Msa0018620:CDS |
| TTCAACTGGCGTGAAGAGGA+TGG | 0.515922 | 1_1:+31481566 | Msa0018620:CDS |
| TTGACCTGATTTGGAGATGG+AGG | 0.515967 | 1_1:-31478520 | None:intergenic |
| CAAAACCAATATGCTAGTCT+AGG | 0.520108 | 1_1:-31481815 | None:intergenic |
| TGCATATCACATGTACAACT+TGG | 0.529028 | 1_1:+31481626 | Msa0018620:CDS |
| TGTTAAGCTTGGCGAAACTA+GGG | 0.529654 | 1_1:+31478376 | Msa0018620:five_prime_UTR |
| TAATGTCAAATATCTGTGCT+TGG | 0.534354 | 1_1:+31481929 | Msa0018620:three_prime_UTR |
| GATTTGACCTGATTTGGAGA+TGG | 0.541306 | 1_1:-31478523 | None:intergenic |
| ATGGAAAGAAACAAATCAGA+GGG | 0.541693 | 1_1:-31482058 | None:intergenic |
| TTCATTCAACTGGCGTGAAG+AGG | 0.543901 | 1_1:+31481562 | Msa0018620:CDS |
| AAGAGGATGGGAGGTGGACA+TGG | 0.543948 | 1_1:+31481579 | Msa0018620:CDS |
| GGCGTGAAGAGGATGGGAGG+TGG | 0.551979 | 1_1:+31481573 | Msa0018620:CDS |
| CTTGAAAGGAAATATAGACT+TGG | 0.553076 | 1_1:+31481964 | Msa0018620:three_prime_UTR |
| CATTTGTAACAATAATCAGA+TGG | 0.565224 | 1_1:+31481782 | Msa0018620:three_prime_UTR |
| TCAACTGGCGTGAAGAGGAT+GGG | 0.574066 | 1_1:+31481567 | Msa0018620:CDS |
| GCATATACTCTGGTTCGCTA+TGG | 0.578575 | 1_1:-31481602 | None:intergenic |
| TGGAAAATGACTGCATACAC+AGG | 0.585917 | 1_1:-31481720 | None:intergenic |
| TTGGACAAGATGAAGTATCA+GGG | 0.612137 | 1_1:+31481645 | Msa0018620:CDS |
| TATGGAAAGAAACAAATCAG+AGG | 0.630206 | 1_1:-31482059 | None:intergenic |
| ATAACGATGGCATTGAACAA+CGG | 0.641834 | 1_1:+31478459 | Msa0018620:exon |
| TATGTTGTGACAGTGAGTAG+AGG | 0.651791 | 1_1:+31481537 | Msa0018620:intron |
| TGATATGCATGCATATACTC+TGG | 0.665333 | 1_1:-31481612 | None:intergenic |
| ACAATAATCAGATGGATTTG+GGG | 0.667145 | 1_1:+31481790 | Msa0018620:three_prime_UTR |
| ACTGGCGTGAAGAGGATGGG+AGG | 0.681452 | 1_1:+31481570 | Msa0018620:CDS |
| AATCGAATTTGCGATAACGA+TGG | 0.695476 | 1_1:+31478446 | Msa0018620:exon |
| TGGAAAGAAACAAATCAGAG+GGG | 0.753697 | 1_1:-31482057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGCTTAATATAAAATA+TGG | - | chr1_1:31479557-31479576 | None:intergenic | 10.0% |
| !!! | AGATTTGATTTATTAATAAA+TGG | + | chr1_1:31479859-31479878 | Msa0018620:intron | 10.0% |
| !!! | TTTGTTTTTACTTTCAATTT+CGG | + | chr1_1:31478599-31478618 | Msa0018620:intron | 15.0% |
| !! | ATTAGGTTTAAATAACTAAA+CGG | + | chr1_1:31479389-31479408 | Msa0018620:intron | 15.0% |
| !!! | GTTTTTTTTAAGGAAAAATA+TGG | - | chr1_1:31479528-31479547 | None:intergenic | 15.0% |
| !!! | ATGGTTAATTGTTTTTTTTA+AGG | - | chr1_1:31479538-31479557 | None:intergenic | 15.0% |
| !!! | TTTGATTTATTAATAAATGG+AGG | + | chr1_1:31479862-31479881 | Msa0018620:intron | 15.0% |
| !! | TTGATTTATTAATAAATGGA+GGG | + | chr1_1:31479863-31479882 | Msa0018620:intron | 15.0% |
| !!! | TTAGGTTTTTTTTATCTAAA+TGG | + | chr1_1:31480076-31480095 | Msa0018620:intron | 15.0% |
| !! | TTATGGACATAAATAAATTA+AGG | + | chr1_1:31480511-31480530 | Msa0018620:intron | 15.0% |
| !!! | AGTTTTATTTATGAATTACA+TGG | + | chr1_1:31480607-31480626 | Msa0018620:intron | 15.0% |
| !!! | GTTTTATTTATGAATTACAT+GGG | + | chr1_1:31480608-31480627 | Msa0018620:intron | 15.0% |
| !! | TTTGAAAGAAAAAAAAATCA+TGG | - | chr1_1:31481031-31481050 | None:intergenic | 15.0% |
| !! | TTTCAATTTCGGTTATATTA+GGG | + | chr1_1:31478610-31478629 | Msa0018620:intron | 20.0% |
| !!! | GTTATATTAGGGTTTTTATT+TGG | + | chr1_1:31478621-31478640 | Msa0018620:intron | 20.0% |
| !!! | AAATAAAAAGCTATCTTTTG+TGG | - | chr1_1:31479210-31479229 | None:intergenic | 20.0% |
| !!! | TCACTAATATATAGCTTTTT+TGG | - | chr1_1:31479282-31479301 | None:intergenic | 20.0% |
| !!! | GATTAAACATTGTTTTTGAA+TGG | - | chr1_1:31479464-31479483 | None:intergenic | 20.0% |
| !!! | AAATGTTTGCTAAAAGATAA+AGG | - | chr1_1:31479592-31479611 | None:intergenic | 20.0% |
| !!! | ATCGAATTTTAGAAAGATAA+AGG | - | chr1_1:31479623-31479642 | None:intergenic | 20.0% |
| !!! | TTAATTTCGTTTTTCAATGT+TGG | + | chr1_1:31479686-31479705 | Msa0018620:intron | 20.0% |
| !!! | GATTATTTTCTTGTTCAATT+TGG | - | chr1_1:31479722-31479741 | None:intergenic | 20.0% |
| !!! | TTGTTGATAAATGTGTTATT+TGG | + | chr1_1:31479971-31479990 | Msa0018620:intron | 20.0% |
| !! | TTATTTGACAATTGAACATA+TGG | + | chr1_1:31480436-31480455 | Msa0018620:intron | 20.0% |
| !! | AATAAATTAAGGTAGGAATT+TGG | + | chr1_1:31480522-31480541 | Msa0018620:intron | 20.0% |
| !! | ATAAATTAAGGTAGGAATTT+GGG | + | chr1_1:31480523-31480542 | Msa0018620:intron | 20.0% |
| !!! | GTTCATGTTTAATTTTCATA+TGG | + | chr1_1:31481869-31481888 | Msa0018620:three_prime_UTR | 20.0% |
| !! | TGATTATTACAAGAGATATA+TGG | - | chr1_1:31481900-31481919 | None:intergenic | 20.0% |
| ! | AATTCTTCCTCAAAAGTAAT+CGG | - | chr1_1:31478574-31478593 | None:intergenic | 25.0% |
| ! | CTTTCAATTTCGGTTATATT+AGG | + | chr1_1:31478609-31478628 | Msa0018620:intron | 25.0% |
| ! | GTTAATCTTGAATTGAAACT+CGG | - | chr1_1:31478844-31478863 | None:intergenic | 25.0% |
| !!! | TTTTTGGAATAGTAGTAGAT+CGG | - | chr1_1:31479266-31479285 | None:intergenic | 25.0% |
| ! | AAGTATATAGACGCTAATAA+AGG | - | chr1_1:31479329-31479348 | None:intergenic | 25.0% |
| !! | ATTAGCGTCTATATACTTTT+TGG | + | chr1_1:31479331-31479350 | Msa0018620:intron | 25.0% |
| ! | TTAAACCTAATCTCATCAAA+TGG | - | chr1_1:31479380-31479399 | None:intergenic | 25.0% |
| ! | AGATTATATAGTTAAGCCAA+AGG | - | chr1_1:31479433-31479452 | None:intergenic | 25.0% |
| !!! | TGATGTTTTAAATTGCGATT+AGG | + | chr1_1:31479899-31479918 | Msa0018620:intron | 25.0% |
| !!! | TTGTGGTTTTGTTTATATTG+TGG | + | chr1_1:31479922-31479941 | Msa0018620:intron | 25.0% |
| ! | GGACATAAATAAATTAAGGT+AGG | + | chr1_1:31480515-31480534 | Msa0018620:intron | 25.0% |
| ! | GAATGTTATCAATGATACTA+TGG | - | chr1_1:31480577-31480596 | None:intergenic | 25.0% |
| ! | AATTAACGGCTTAGATTAAA+TGG | + | chr1_1:31480697-31480716 | Msa0018620:intron | 25.0% |
| ! | ACATAAGAACAACTATTCAA+TGG | + | chr1_1:31480920-31480939 | Msa0018620:intron | 25.0% |
| ! | CATAAGAACAACTATTCAAT+GGG | + | chr1_1:31480921-31480940 | Msa0018620:intron | 25.0% |
| !!! | TCTCTTGTTTTAAGATGATT+AGG | + | chr1_1:31481470-31481489 | Msa0018620:intron | 25.0% |
| ! | CATCTGATTATTGTTACAAA+TGG | - | chr1_1:31481784-31481803 | None:intergenic | 25.0% |
| ! | CATTTGTAACAATAATCAGA+TGG | + | chr1_1:31481782-31481801 | Msa0018620:three_prime_UTR | 25.0% |
| !! | TAACAATAATCAGATGGATT+TGG | + | chr1_1:31481788-31481807 | Msa0018620:three_prime_UTR | 25.0% |
| !! | AACAATAATCAGATGGATTT+GGG | + | chr1_1:31481789-31481808 | Msa0018620:three_prime_UTR | 25.0% |
| ! | GGAATCATATTGCATTAATA+TGG | - | chr1_1:31482080-31482099 | None:intergenic | 25.0% |
| GAAACACAAATTTCTTTCGA+AGG | + | chr1_1:31478412-31478431 | Msa0018620:five_prime_UTR | 30.0% | |
| CAATTCAAGATTAACCAAAC+AGG | + | chr1_1:31478849-31478868 | Msa0018620:intron | 30.0% | |
| ! | TTTTCACGTTCAATATGTCT+TGG | + | chr1_1:31479227-31479246 | Msa0018620:intron | 30.0% |
| TTTCACGTTCAATATGTCTT+GGG | + | chr1_1:31479228-31479247 | Msa0018620:intron | 30.0% | |
| !!! | CGTCTATATACTTTTTGGTT+AGG | + | chr1_1:31479336-31479355 | Msa0018620:intron | 30.0% |
| CTTAACCATTTGATGAGATT+AGG | + | chr1_1:31479372-31479391 | Msa0018620:intron | 30.0% | |
| ! | TTTAAATTGCGATTAGGTTG+TGG | + | chr1_1:31479905-31479924 | Msa0018620:intron | 30.0% |
| !! | TAGCTTTGTTTCATTCTGTT+AGG | + | chr1_1:31480255-31480274 | Msa0018620:intron | 30.0% |
| TTCATATCCTCAAGTTATTG+AGG | + | chr1_1:31480292-31480311 | Msa0018620:intron | 30.0% | |
| TCATATCCTCAAGTTATTGA+GGG | + | chr1_1:31480293-31480312 | Msa0018620:intron | 30.0% | |
| AATGCATAAGTGAATAGCTT+TGG | + | chr1_1:31480330-31480349 | Msa0018620:intron | 30.0% | |
| ATTTAAATCCAGCGAAAACA+TGG | - | chr1_1:31480386-31480405 | None:intergenic | 30.0% | |
| ACTAAATGAAACTCAATCAC+AGG | - | chr1_1:31480472-31480491 | None:intergenic | 30.0% | |
| GATTGAGTTTCATTTAGTTG+AGG | + | chr1_1:31480474-31480493 | Msa0018620:intron | 30.0% | |
| ! | AGGCTTCATTGTTGTTATTA+TGG | + | chr1_1:31480494-31480513 | Msa0018620:intron | 30.0% |
| ! | GTAGGAATTTGGGTTTAATT+AGG | + | chr1_1:31480533-31480552 | Msa0018620:intron | 30.0% |
| GGTTTAATTAGGTCATTATC+TGG | + | chr1_1:31480544-31480563 | Msa0018620:intron | 30.0% | |
| GCCATTGGATTAACAATTAA+CGG | + | chr1_1:31480683-31480702 | Msa0018620:intron | 30.0% | |
| !! | TTGTACATTTTGATCCAAGA+TGG | - | chr1_1:31480787-31480806 | None:intergenic | 30.0% |
| TTCAGAATTAAACTCTTGGA+AGG | + | chr1_1:31480944-31480963 | Msa0018620:intron | 30.0% | |
| TCAGAATTAAACTCTTGGAA+GGG | + | chr1_1:31480945-31480964 | Msa0018620:intron | 30.0% | |
| AGTGAGAAAAAATGCATCAA+TGG | + | chr1_1:31480980-31480999 | Msa0018620:intron | 30.0% | |
| AGAAAAAATGCATCAATGGT+GGG | + | chr1_1:31480984-31481003 | Msa0018620:intron | 30.0% | |
| ! | ATATTTTGTATGCCCAATCA+AGG | - | chr1_1:31481339-31481358 | None:intergenic | 30.0% |
| TGATTGGGCATACAAAATAT+TGG | + | chr1_1:31481339-31481358 | Msa0018620:intron | 30.0% | |
| !!! | AGCCATCTATTTTAATCCAA+TGG | + | chr1_1:31481395-31481414 | Msa0018620:intron | 30.0% |
| AGCCATTGGATTAAAATAGA+TGG | - | chr1_1:31481400-31481419 | None:intergenic | 30.0% | |
| ! | TTTTTACGTGGAAATGAAAG+AGG | - | chr1_1:31481431-31481450 | None:intergenic | 30.0% |
| !!! | TGAGAATGACTTTTTTTACG+TGG | - | chr1_1:31481443-31481462 | None:intergenic | 30.0% |
| ! | ACAATAATCAGATGGATTTG+GGG | + | chr1_1:31481790-31481809 | Msa0018620:three_prime_UTR | 30.0% |
| TAATGTCAAATATCTGTGCT+TGG | + | chr1_1:31481929-31481948 | Msa0018620:three_prime_UTR | 30.0% | |
| ! | GGACATTTTTATGTCTTGAA+AGG | + | chr1_1:31481950-31481969 | Msa0018620:three_prime_UTR | 30.0% |
| CTTGAAAGGAAATATAGACT+TGG | + | chr1_1:31481964-31481983 | Msa0018620:three_prime_UTR | 30.0% | |
| !!! | TTCAGTAGTTTTGATCAAGT+TGG | + | chr1_1:31482013-31482032 | Msa0018620:three_prime_UTR | 30.0% |
| ATGGAAAGAAACAAATCAGA+GGG | - | chr1_1:31482061-31482080 | None:intergenic | 30.0% | |
| TATGGAAAGAAACAAATCAG+AGG | - | chr1_1:31482062-31482081 | None:intergenic | 30.0% | |
| ! | CGGAAACATTTTGTTAAGCT+TGG | + | chr1_1:31478365-31478384 | Msa0018620:five_prime_UTR | 35.0% |
| AATCGAATTTGCGATAACGA+TGG | + | chr1_1:31478446-31478465 | Msa0018620:exon | 35.0% | |
| ! | ATAACGATGGCATTGAACAA+CGG | + | chr1_1:31478459-31478478 | Msa0018620:exon | 35.0% |
| GAACATGAAAGAAAAGGTGA+GGG | - | chr1_1:31478548-31478567 | None:intergenic | 35.0% | |
| TGAACATGAAAGAAAAGGTG+AGG | - | chr1_1:31478549-31478568 | None:intergenic | 35.0% | |
| CGGATTGAACATGAAAGAAA+AGG | - | chr1_1:31478554-31478573 | None:intergenic | 35.0% | |
| !! | GTTCAATCCGATTACTTTTG+AGG | + | chr1_1:31478564-31478583 | Msa0018620:intron | 35.0% |
| TTGAATTGAAACTCGGATCT+GGG | - | chr1_1:31478837-31478856 | None:intergenic | 35.0% | |
| GGATTAAACAAAGAGAGTGA+CGG | + | chr1_1:31478920-31478939 | Msa0018620:intron | 35.0% | |
| TGTCTATGTTCTTCTCCTTT+CGG | - | chr1_1:31478949-31478968 | None:intergenic | 35.0% | |
| ! | GTTTTCGTTTGTGAAACTCA+CGG | - | chr1_1:31479015-31479034 | None:intergenic | 35.0% |
| TGAGTTTCACAAACGAAAAC+TGG | + | chr1_1:31479015-31479034 | Msa0018620:intron | 35.0% | |
| TAACTAAACGGATGAAGACA+TGG | + | chr1_1:31479401-31479420 | Msa0018620:intron | 35.0% | |
| !! | GTTTTTCAATGTTGGATGAG+AGG | + | chr1_1:31479694-31479713 | Msa0018620:intron | 35.0% |
| TTATGCAATTACACTCACGA+CGG | - | chr1_1:31479999-31480018 | None:intergenic | 35.0% | |
| TTGCATAACGATGTTGTTGA+AGG | + | chr1_1:31480011-31480030 | Msa0018620:intron | 35.0% | |
| AGTCTACTAACAAAGATTCG+AGG | - | chr1_1:31480043-31480062 | None:intergenic | 35.0% | |
| AGACTATTCTAGTGACTGTT+AGG | + | chr1_1:31480058-31480077 | Msa0018620:intron | 35.0% | |
| CTAATAACACCAACCTTAGA+GGG | + | chr1_1:31480149-31480168 | Msa0018620:intron | 35.0% | |
| TTCAAAACAAAAGCCCTCTA+AGG | - | chr1_1:31480165-31480184 | None:intergenic | 35.0% | |
| !!! | GAGGGCTTTTGTTTTGAAAT+CGG | + | chr1_1:31480167-31480186 | Msa0018620:intron | 35.0% |
| !!! | CTTTTGTTTTGAAATCGGTG+TGG | + | chr1_1:31480172-31480191 | Msa0018620:intron | 35.0% |
| CATATCCTCAAGTTATTGAG+GGG | + | chr1_1:31480294-31480313 | Msa0018620:intron | 35.0% | |
| CCTCTAACTCTCACATAAAA+AGG | - | chr1_1:31480653-31480672 | None:intergenic | 35.0% | |
| ! | CCTTTTTATGTGAGAGTTAG+AGG | + | chr1_1:31480650-31480669 | Msa0018620:intron | 35.0% |
| GCCGTTAATTGTTAATCCAA+TGG | - | chr1_1:31480687-31480706 | None:intergenic | 35.0% | |
| !! | ATTTTGATCCAAGATGGCAA+TGG | - | chr1_1:31480781-31480800 | None:intergenic | 35.0% |
| TGGGTTCAGAATTAAACTCT+TGG | + | chr1_1:31480940-31480959 | Msa0018620:intron | 35.0% | |
| GAGAAAAAATGCATCAATGG+TGG | + | chr1_1:31480983-31481002 | Msa0018620:intron | 35.0% | |
| GAAAAAATGCATCAATGGTG+GGG | + | chr1_1:31480985-31481004 | Msa0018620:intron | 35.0% | |
| AAAAAATGCATCAATGGTGG+GGG | + | chr1_1:31480986-31481005 | Msa0018620:intron | 35.0% | |
| ! | AAAACATTCTATGCTGGTTG+TGG | + | chr1_1:31481226-31481245 | Msa0018620:intron | 35.0% |
| ! | AAACATTCTATGCTGGTTGT+GGG | + | chr1_1:31481227-31481246 | Msa0018620:intron | 35.0% |
| AAAGCTAACAATATCGCCAT+TGG | + | chr1_1:31481254-31481273 | Msa0018620:intron | 35.0% | |
| ATGTTAACACAGTCCTTGAT+TGG | + | chr1_1:31481323-31481342 | Msa0018620:intron | 35.0% | |
| TGTTAACACAGTCCTTGATT+GGG | + | chr1_1:31481324-31481343 | Msa0018620:intron | 35.0% | |
| ! | AGTAGAGGTTTTCATTCAAC+TGG | + | chr1_1:31481552-31481571 | Msa0018620:CDS | 35.0% |
| TGATATGCATGCATATACTC+TGG | - | chr1_1:31481615-31481634 | None:intergenic | 35.0% | |
| TGCATATCACATGTACAACT+TGG | + | chr1_1:31481626-31481645 | Msa0018620:CDS | 35.0% | |
| ! | TTGGACAAGATGAAGTATCA+GGG | + | chr1_1:31481645-31481664 | Msa0018620:CDS | 35.0% |
| ! | CAAAACCAATATGCTAGTCT+AGG | - | chr1_1:31481818-31481837 | None:intergenic | 35.0% |
| !!! | CTAGACTAGCATATTGGTTT+TGG | + | chr1_1:31481816-31481835 | Msa0018620:three_prime_UTR | 35.0% |
| !! | TTGATCAAGTTGGTTATTGC+AGG | + | chr1_1:31482023-31482042 | Msa0018620:three_prime_UTR | 35.0% |
| TGGAAAGAAACAAATCAGAG+GGG | - | chr1_1:31482060-31482079 | None:intergenic | 35.0% | |
| TTGTTAAGCTTGGCGAAACT+AGG | + | chr1_1:31478375-31478394 | Msa0018620:five_prime_UTR | 40.0% | |
| TGTTAAGCTTGGCGAAACTA+GGG | + | chr1_1:31478376-31478395 | Msa0018620:five_prime_UTR | 40.0% | |
| !! | GATTTGACCTGATTTGGAGA+TGG | - | chr1_1:31478526-31478545 | None:intergenic | 40.0% |
| TGAATTGAAACTCGGATCTG+GGG | - | chr1_1:31478836-31478855 | None:intergenic | 40.0% | |
| CTTGAATTGAAACTCGGATC+TGG | - | chr1_1:31478838-31478857 | None:intergenic | 40.0% | |
| !! | GGATGAGAAGTGTTTGAGTT+TGG | + | chr1_1:31480097-31480116 | Msa0018620:intron | 40.0% |
| !! | CCTCTAAGGTTGGTGTTATT+AGG | - | chr1_1:31480151-31480170 | None:intergenic | 40.0% |
| CCTAATAACACCAACCTTAG+AGG | + | chr1_1:31480148-31480167 | Msa0018620:intron | 40.0% | |
| !! | AAACAAAAGCCCTCTAAGGT+TGG | - | chr1_1:31480161-31480180 | None:intergenic | 40.0% |
| TCAATCCCCTCAATAACTTG+AGG | - | chr1_1:31480302-31480321 | None:intergenic | 40.0% | |
| CGAAAACATGGACAGCAATA+AGG | - | chr1_1:31480374-31480393 | None:intergenic | 40.0% | |
| TTGTTAATCCAATGGCTACC+AGG | - | chr1_1:31480679-31480698 | None:intergenic | 40.0% | |
| GTGAAGATAAGTGTCATGTG+AGG | - | chr1_1:31480735-31480754 | None:intergenic | 40.0% | |
| ATCTTCGTTAGTGGCATAGT+TGG | + | chr1_1:31481099-31481118 | Msa0018620:intron | 40.0% | |
| ATACAAAATATTGGCGCGTG+AGG | + | chr1_1:31481348-31481367 | Msa0018620:intron | 40.0% | |
| ! | AAGAGGTTCTAGTTAGCCAT+TGG | - | chr1_1:31481414-31481433 | None:intergenic | 40.0% |
| TATGTTGTGACAGTGAGTAG+AGG | + | chr1_1:31481537-31481556 | Msa0018620:intron | 40.0% | |
| ! | CTTGGACAAGATGAAGTATC+AGG | + | chr1_1:31481644-31481663 | Msa0018620:CDS | 40.0% |
| TGGAAAATGACTGCATACAC+AGG | - | chr1_1:31481723-31481742 | None:intergenic | 40.0% | |
| ! | ACTTGGAATGTCCTGTTTTC+AGG | + | chr1_1:31481981-31482000 | Msa0018620:three_prime_UTR | 40.0% |
| GAATCCTCCATCTCCAAATC+AGG | + | chr1_1:31478516-31478535 | Msa0018620:CDS | 45.0% | |
| !! | TTGACCTGATTTGGAGATGG+AGG | - | chr1_1:31478523-31478542 | None:intergenic | 45.0% |
| GTGAGGGATTTGACCTGATT+TGG | - | chr1_1:31478532-31478551 | None:intergenic | 45.0% | |
| TGGTTCAAGGTGGTTCAGTT+TGG | - | chr1_1:31478749-31478768 | None:intergenic | 45.0% | |
| TTGCTCGTTGAGGTTCGTTT+CGG | - | chr1_1:31478781-31478800 | None:intergenic | 45.0% | |
| AACCTCAACGAGCAAAGATC+TGG | + | chr1_1:31478786-31478805 | Msa0018620:intron | 45.0% | |
| TTCCAGATCTTTGCTCGTTG+AGG | - | chr1_1:31478791-31478810 | None:intergenic | 45.0% | |
| !! | AAACTCGGATCTGGGGTTTT+CGG | - | chr1_1:31478829-31478848 | None:intergenic | 45.0% |
| ! | TTCCAGTGGGTTCTATTCGT+CGG | - | chr1_1:31478973-31478992 | None:intergenic | 45.0% |
| !! | CACAAACGAAAACTGGCCTT+CGG | + | chr1_1:31479022-31479041 | Msa0018620:intron | 45.0% |
| !!! | CCTTCCTGTTTTGTTTCCGA+AGG | - | chr1_1:31479041-31479060 | None:intergenic | 45.0% |
| CCTTCGGAAACAAAACAGGA+AGG | + | chr1_1:31479038-31479057 | Msa0018620:intron | 45.0% | |
| GGAAACAAAACAGGAAGGAG+AGG | + | chr1_1:31479043-31479062 | Msa0018620:intron | 45.0% | |
| AACAGGAAGGAGAGGTGATT+CGG | + | chr1_1:31479051-31479070 | Msa0018620:intron | 45.0% | |
| TCGGTCGTACAAGATGTAGA+CGG | - | chr1_1:31479110-31479129 | None:intergenic | 45.0% | |
| ATCTTGTACGACCGACGATT+CGG | + | chr1_1:31479115-31479134 | Msa0018620:intron | 45.0% | |
| ! | AGAAGGGAGACAACACGTTT+TGG | + | chr1_1:31479139-31479158 | Msa0018620:intron | 45.0% |
| ! | GAAGGGAGACAACACGTTTT+GGG | + | chr1_1:31479140-31479159 | Msa0018620:intron | 45.0% |
| GAAGACATGGATCTCTCCTT+TGG | + | chr1_1:31479414-31479433 | Msa0018620:intron | 45.0% | |
| TGAAATCGGTGTGGAAGTGA+AGG | + | chr1_1:31480181-31480200 | Msa0018620:intron | 45.0% | |
| AAGGAGTCGGACGAATATGA+AGG | + | chr1_1:31480200-31480219 | Msa0018620:intron | 45.0% | |
| AGGAGTCGGACGAATATGAA+GGG | + | chr1_1:31480201-31480220 | Msa0018620:intron | 45.0% | |
| ! | ATTGCTGTCCATGTTTTCGC+TGG | + | chr1_1:31480375-31480394 | Msa0018620:intron | 45.0% |
| TGTGAGAGTTAGAGGATTCC+TGG | + | chr1_1:31480658-31480677 | Msa0018620:intron | 45.0% | |
| AATGTCTGTGAGATTGCGTG+AGG | - | chr1_1:31480818-31480837 | None:intergenic | 45.0% | |
| GCAATCTCACAGACATTCCT+TGG | + | chr1_1:31480821-31480840 | Msa0018620:intron | 45.0% | |
| TGATTCACGCGAAACATCCA+AGG | - | chr1_1:31480841-31480860 | None:intergenic | 45.0% | |
| TCTCACGCACATTCACATCT+TGG | - | chr1_1:31481063-31481082 | None:intergenic | 45.0% | |
| ATGCTTGGCATCTTCGTTAG+TGG | + | chr1_1:31481090-31481109 | Msa0018620:intron | 45.0% | |
| GTTAGTGGCATAGTTGGTTG+TGG | + | chr1_1:31481105-31481124 | Msa0018620:intron | 45.0% | |
| TTCCTCTCCAACTACTGTTG+AGG | + | chr1_1:31481159-31481178 | Msa0018620:intron | 45.0% | |
| ! | TTTGGAGCCTCAACAGTAGT+TGG | - | chr1_1:31481169-31481188 | None:intergenic | 45.0% |
| !!! | TGAAATGGGGATGCTGGTTT+TGG | - | chr1_1:31481187-31481206 | None:intergenic | 45.0% |
| AACCAGCATCCCCATTTCAA+TGG | + | chr1_1:31481188-31481207 | Msa0018620:intron | 45.0% | |
| GATGCCACACCATTGAAATG+GGG | - | chr1_1:31481200-31481219 | None:intergenic | 45.0% | |
| CGATGCCACACCATTGAAAT+GGG | - | chr1_1:31481201-31481220 | None:intergenic | 45.0% | |
| CCATTTCAATGGTGTGGCAT+CGG | + | chr1_1:31481199-31481218 | Msa0018620:intron | 45.0% | |
| GGCTGGAAAACATTCTATGC+TGG | + | chr1_1:31481220-31481239 | Msa0018620:intron | 45.0% | |
| GCTAACAATATCGCCATTGG+TGG | + | chr1_1:31481257-31481276 | Msa0018620:intron | 45.0% | |
| ! | ACAATATCGCCATTGGTGGT+AGG | + | chr1_1:31481261-31481280 | Msa0018620:intron | 45.0% |
| GAGGGGATGAATCAGTTTCA+GGG | + | chr1_1:31481296-31481315 | Msa0018620:intron | 45.0% | |
| AGGGGATGAATCAGTTTCAG+GGG | + | chr1_1:31481297-31481316 | Msa0018620:intron | 45.0% | |
| TTCATTCAACTGGCGTGAAG+AGG | + | chr1_1:31481562-31481581 | Msa0018620:CDS | 45.0% | |
| ! | GCATATACTCTGGTTCGCTA+TGG | - | chr1_1:31481605-31481624 | None:intergenic | 45.0% |
| GTGTTCACAGCTTTCAGCAT+TGG | + | chr1_1:31481687-31481706 | Msa0018620:CDS | 45.0% | |
| ! | CAGATGCTGTCTTCTTTTGC+TGG | - | chr1_1:31481743-31481762 | None:intergenic | 45.0% |
| CAGCAAAAGAAGACAGCATC+TGG | + | chr1_1:31481741-31481760 | Msa0018620:CDS | 45.0% | |
| GGGATCCTAGACTAGCATAT+TGG | + | chr1_1:31481810-31481829 | Msa0018620:three_prime_UTR | 45.0% | |
| !! | TGGAATGTCCTGTTTTCAGG+TGG | + | chr1_1:31481984-31482003 | Msa0018620:three_prime_UTR | 45.0% |
| !!! | AATGTCCTGTTTTCAGGTGG+TGG | + | chr1_1:31481987-31482006 | Msa0018620:three_prime_UTR | 45.0% |
| AAGAACCACCACCTGAAAAC+AGG | - | chr1_1:31481995-31482014 | None:intergenic | 45.0% | |
| TTTGGTAGGAACGAGGAGGT+TGG | - | chr1_1:31478876-31478895 | None:intergenic | 50.0% | |
| AACCGACGAATAGAACCCAC+TGG | + | chr1_1:31478968-31478987 | Msa0018620:intron | 50.0% | |
| TAGAACCCACTGGAACCCAT+TGG | + | chr1_1:31478978-31478997 | Msa0018620:intron | 50.0% | |
| ! | CTGGCCTTCGGAAACAAAAC+AGG | + | chr1_1:31479034-31479053 | Msa0018620:intron | 50.0% |
| !! | GGTGGTTGGTGATTCGATGA+TGG | - | chr1_1:31479086-31479105 | None:intergenic | 50.0% |
| ! | AAGATGTAGACGGTGGTGGT+TGG | - | chr1_1:31479100-31479119 | None:intergenic | 50.0% |
| GTACAAGATGTAGACGGTGG+TGG | - | chr1_1:31479104-31479123 | None:intergenic | 50.0% | |
| GTCGTACAAGATGTAGACGG+TGG | - | chr1_1:31479107-31479126 | None:intergenic | 50.0% | |
| TCTCCCTTCTTCCGAATCGT+CGG | - | chr1_1:31479129-31479148 | None:intergenic | 50.0% | |
| TAGTGAGCGAGCAAGATGAG+AGG | + | chr1_1:31479296-31479315 | Msa0018620:intron | 50.0% | |
| GGAGTCGGACGAATATGAAG+GGG | + | chr1_1:31480202-31480221 | Msa0018620:intron | 50.0% | |
| AGAGGATTCCTGGTAGCCAT+TGG | + | chr1_1:31480668-31480687 | Msa0018620:intron | 50.0% | |
| AAGATGGCAATGGCAACAGG+AGG | - | chr1_1:31480771-31480790 | None:intergenic | 50.0% | |
| TCCTGTTGCCATTGCCATCT+TGG | + | chr1_1:31480770-31480789 | Msa0018620:intron | 50.0% | |
| TCCAAGATGGCAATGGCAAC+AGG | - | chr1_1:31480774-31480793 | None:intergenic | 50.0% | |
| TCTGTGAGATTGCGTGAGGA+TGG | - | chr1_1:31480814-31480833 | None:intergenic | 50.0% | |
| GCGTGAGAGAGTTGTATGCT+TGG | + | chr1_1:31481075-31481094 | Msa0018620:intron | 50.0% | |
| AGTGGCATAGTTGGTTGTGG+TGG | + | chr1_1:31481108-31481127 | Msa0018620:intron | 50.0% | |
| AACCCTGTTGCTCGCTTGAT+GGG | - | chr1_1:31481141-31481160 | None:intergenic | 50.0% | |
| AGCCTCAACAGTAGTTGGAG+AGG | - | chr1_1:31481164-31481183 | None:intergenic | 50.0% | |
| CACCATTGAAATGGGGATGC+TGG | - | chr1_1:31481193-31481212 | None:intergenic | 50.0% | |
| GCATCCCCATTTCAATGGTG+TGG | + | chr1_1:31481193-31481212 | Msa0018620:intron | 50.0% | |
| CCGATGCCACACCATTGAAA+TGG | - | chr1_1:31481202-31481221 | None:intergenic | 50.0% | |
| ! | ACTGATTCATCCCCTCCCAT+GGG | - | chr1_1:31481292-31481311 | None:intergenic | 50.0% |
| ! | AACTGATTCATCCCCTCCCA+TGG | - | chr1_1:31481293-31481312 | None:intergenic | 50.0% |
| GGAGGGGATGAATCAGTTTC+AGG | + | chr1_1:31481295-31481314 | Msa0018620:intron | 50.0% | |
| TTCAACTGGCGTGAAGAGGA+TGG | + | chr1_1:31481566-31481585 | Msa0018620:CDS | 50.0% | |
| TCAACTGGCGTGAAGAGGAT+GGG | + | chr1_1:31481567-31481586 | Msa0018620:CDS | 50.0% | |
| !! | GCTGGTTTGGTGGTTCAAGG+TGG | - | chr1_1:31478759-31478778 | None:intergenic | 55.0% |
| !! | TCGGCTGGTTTGGTGGTTCA+AGG | - | chr1_1:31478762-31478781 | None:intergenic | 55.0% |
| !! | GTTCGTTTCGGCTGGTTTGG+TGG | - | chr1_1:31478769-31478788 | None:intergenic | 55.0% |
| ! | GAGGTTCGTTTCGGCTGGTT+TGG | - | chr1_1:31478772-31478791 | None:intergenic | 55.0% |
| TCGTTGAGGTTCGTTTCGGC+TGG | - | chr1_1:31478777-31478796 | None:intergenic | 55.0% | |
| ACGAGGAGGTTGGACCTGTT+TGG | - | chr1_1:31478866-31478885 | None:intergenic | 55.0% | |
| GTCGTTTGGTAGGAACGAGG+AGG | - | chr1_1:31478880-31478899 | None:intergenic | 55.0% | |
| ! | GCTGTCGTTTGGTAGGAACG+AGG | - | chr1_1:31478883-31478902 | None:intergenic | 55.0% |
| ! | CGTTGTCGCTGTCGTTTGGT+AGG | - | chr1_1:31478890-31478909 | None:intergenic | 55.0% |
| ! | GGAAGGAGAGGTGATTCGGA+TGG | + | chr1_1:31479055-31479074 | Msa0018620:intron | 55.0% |
| ! | ACGACCGACGATTCGGAAGA+AGG | + | chr1_1:31479122-31479141 | Msa0018620:intron | 55.0% |
| ! | CGACCGACGATTCGGAAGAA+GGG | + | chr1_1:31479123-31479142 | Msa0018620:intron | 55.0% |
| CGGTGTGGAAGTGAAGGAGT+CGG | + | chr1_1:31480187-31480206 | Msa0018620:intron | 55.0% | |
| ATCCCCATCAAGCGAGCAAC+AGG | + | chr1_1:31481135-31481154 | Msa0018620:intron | 55.0% | |
| TCCCCATCAAGCGAGCAACA+GGG | + | chr1_1:31481136-31481155 | Msa0018620:intron | 55.0% | |
| ACCCTGTTGCTCGCTTGATG+GGG | - | chr1_1:31481140-31481159 | None:intergenic | 55.0% | |
| GAACCCTGTTGCTCGCTTGA+TGG | - | chr1_1:31481142-31481161 | None:intergenic | 55.0% | |
| !! | TTCAATGGTGTGGCATCGGC+TGG | + | chr1_1:31481203-31481222 | Msa0018620:intron | 55.0% |
| ! | ATCGCCATTGGTGGTAGGTG+TGG | + | chr1_1:31481266-31481285 | Msa0018620:intron | 55.0% |
| AAGAGGATGGGAGGTGGACA+TGG | + | chr1_1:31481579-31481598 | Msa0018620:CDS | 55.0% | |
| GTCGCGTTGTCGCTGTCGTT+TGG | - | chr1_1:31478894-31478913 | None:intergenic | 60.0% | |
| AGAGAGTGACGGTCGCCGAA+AGG | + | chr1_1:31478931-31478950 | Msa0018620:intron | 60.0% | |
| TGGGCCACACCTACCACCAA+TGG | - | chr1_1:31481273-31481292 | None:intergenic | 60.0% | |
| ! | TTGGTGGTAGGTGTGGCCCA+TGG | + | chr1_1:31481273-31481292 | Msa0018620:intron | 60.0% |
| TGGTGGTAGGTGTGGCCCAT+GGG | + | chr1_1:31481274-31481293 | Msa0018620:intron | 60.0% | |
| ACTGGCGTGAAGAGGATGGG+AGG | + | chr1_1:31481570-31481589 | Msa0018620:CDS | 60.0% | |
| CGACAGCGACAACGCGACGA+AGG | + | chr1_1:31478896-31478915 | Msa0018620:intron | 65.0% | |
| CAGCGACAACGCGACGAAGG+AGG | + | chr1_1:31478899-31478918 | Msa0018620:intron | 65.0% | |
| ! | CCGCGCCAATGGGTTCCAGT+GGG | - | chr1_1:31478986-31479005 | None:intergenic | 65.0% |
| CCCACTGGAACCCATTGGCG+CGG | + | chr1_1:31478983-31479002 | Msa0018620:intron | 65.0% | |
| ACTGGAACCCATTGGCGCGG+CGG | + | chr1_1:31478986-31479005 | Msa0018620:intron | 65.0% | |
| TGGTAGGTGTGGCCCATGGG+AGG | + | chr1_1:31481277-31481296 | Msa0018620:intron | 65.0% | |
| GGTAGGTGTGGCCCATGGGA+GGG | + | chr1_1:31481278-31481297 | Msa0018620:intron | 65.0% | |
| GTAGGTGTGGCCCATGGGAG+GGG | + | chr1_1:31481279-31481298 | Msa0018620:intron | 65.0% | |
| GGCGTGAAGAGGATGGGAGG+TGG | + | chr1_1:31481573-31481592 | Msa0018620:CDS | 65.0% | |
| ! | GCCGCGCCAATGGGTTCCAG+TGG | - | chr1_1:31478987-31479006 | None:intergenic | 70.0% |
| ACGGTAGCCGCCGCGCCAAT+GGG | - | chr1_1:31478996-31479015 | None:intergenic | 70.0% | |
| CACGGTAGCCGCCGCGCCAA+TGG | - | chr1_1:31478997-31479016 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 31478355 | 31482112 | 31478355 | ID=Msa0018620;Name=Msa0018620 |
| chr1_1 | mRNA | 31478355 | 31482112 | 31478355 | ID=Msa0018620-mRNA-1;Parent=Msa0018620;Name=Msa0018620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=110|1|1|1|1|1|2|345|96 |
| chr1_1 | exon | 31478355 | 31478537 | 31478355 | ID=Msa0018620-mRNA-1:exon:10346;Parent=Msa0018620-mRNA-1 |
| chr1_1 | exon | 31481550 | 31482112 | 31481550 | ID=Msa0018620-mRNA-1:exon:10347;Parent=Msa0018620-mRNA-1 |
| chr1_1 | five_prime_UTR | 31478355 | 31478464 | 31478355 | ID=Msa0018620-mRNA-1:five_prime_utr;Parent=Msa0018620-mRNA-1 |
| chr1_1 | CDS | 31478465 | 31478537 | 31478465 | ID=Msa0018620-mRNA-1:cds;Parent=Msa0018620-mRNA-1 |
| chr1_1 | CDS | 31481550 | 31481767 | 31481550 | ID=Msa0018620-mRNA-1:cds;Parent=Msa0018620-mRNA-1 |
| chr1_1 | three_prime_UTR | 31481768 | 31482112 | 31481768 | ID=Msa0018620-mRNA-1:three_prime_utr;Parent=Msa0018620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
