Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849200 | XP_003614571.1 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 4.91e-84 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849200 | sp|Q03958|PFD6_MOUSE | 45.528 | 123 | 65 | 1 | 9 | 129 | 5 | 127 | 1.06e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849200 | G7K0G0 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 2.35e-84 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006290 | Msa0849200 | 0.807124 | 5.892954e-50 | -8.615850e-47 |
| Msa0006880 | Msa0849200 | 0.823787 | 1.147384e-53 | -8.615850e-47 |
| Msa0032260 | Msa0849200 | 0.821511 | 3.883407e-53 | -8.615850e-47 |
| Msa0047160 | Msa0849200 | 0.820602 | 6.289546e-53 | -8.615850e-47 |
| Msa0055150 | Msa0849200 | 0.810656 | 1.034108e-50 | -8.615850e-47 |
| Msa0057140 | Msa0849200 | 0.837219 | 5.913741e-57 | -8.615850e-47 |
| Msa0057710 | Msa0849200 | 0.800314 | 1.527400e-48 | -8.615850e-47 |
| Msa0076000 | Msa0849200 | 0.827161 | 1.822797e-54 | -8.615850e-47 |
| Msa0094470 | Msa0849200 | 0.818156 | 2.270770e-52 | -8.615850e-47 |
| Msa0098740 | Msa0849200 | 0.816793 | 4.605228e-52 | -8.615850e-47 |
| Msa0100300 | Msa0849200 | 0.810859 | 9.348761e-51 | -8.615850e-47 |
| Msa0113970 | Msa0849200 | 0.810149 | 1.330501e-50 | -8.615850e-47 |
| Msa0615440 | Msa0849200 | 0.808303 | 3.308690e-50 | -8.615850e-47 |
| Msa0617580 | Msa0849200 | 0.801142 | 1.035045e-48 | -8.615850e-47 |
| Msa0619070 | Msa0849200 | 0.809861 | 1.535144e-50 | -8.615850e-47 |
| Msa0623700 | Msa0849200 | 0.809616 | 1.732910e-50 | -8.615850e-47 |
| Msa0641140 | Msa0849200 | 0.838917 | 2.162505e-57 | -8.615850e-47 |
| Msa0691900 | Msa0849200 | 0.817391 | 3.379397e-52 | -8.615850e-47 |
| Msa0692940 | Msa0849200 | 0.811645 | 6.312423e-51 | -8.615850e-47 |
| Msa0694840 | Msa0849200 | 0.809390 | 1.937233e-50 | -8.615850e-47 |
| Msa0698060 | Msa0849200 | 0.812175 | 4.839887e-51 | -8.615850e-47 |
| Msa0698490 | Msa0849200 | 0.807631 | 4.600036e-50 | -8.615850e-47 |
| Msa0698660 | Msa0849200 | 0.810161 | 1.322558e-50 | -8.615850e-47 |
| Msa0703230 | Msa0849200 | 0.826737 | 2.301701e-54 | -8.615850e-47 |
| Msa0730000 | Msa0849200 | 0.810803 | 9.611485e-51 | -8.615850e-47 |
| Msa0735310 | Msa0849200 | 0.845820 | 3.200048e-59 | -8.615850e-47 |
| Msa0750880 | Msa0849200 | 0.805437 | 1.335667e-49 | -8.615850e-47 |
| Msa0750920 | Msa0849200 | 0.814611 | 1.410640e-51 | -8.615850e-47 |
| Msa0798440 | Msa0849200 | 0.802273 | 6.066733e-49 | -8.615850e-47 |
| Msa0808270 | Msa0849200 | 0.810110 | 1.356534e-50 | -8.615850e-47 |
| Msa0812140 | Msa0849200 | 0.815279 | 1.003006e-51 | -8.615850e-47 |
| Msa0814320 | Msa0849200 | 0.843595 | 1.272446e-58 | -8.615850e-47 |
| Msa0830390 | Msa0849200 | 0.800176 | 1.629691e-48 | -8.615850e-47 |
| Msa0127310 | Msa0849200 | 0.803634 | 3.173848e-49 | -8.615850e-47 |
| Msa0165440 | Msa0849200 | 0.803856 | 2.854786e-49 | -8.615850e-47 |
| Msa0167480 | Msa0849200 | 0.807648 | 4.560544e-50 | -8.615850e-47 |
| Msa0177270 | Msa0849200 | 0.810320 | 1.222340e-50 | -8.615850e-47 |
| Msa0182280 | Msa0849200 | 0.800449 | 1.433526e-48 | -8.615850e-47 |
| Msa0186890 | Msa0849200 | 0.825472 | 4.600831e-54 | -8.615850e-47 |
| Msa0198520 | Msa0849200 | 0.809358 | 1.968355e-50 | -8.615850e-47 |
| Msa0198530 | Msa0849200 | 0.810087 | 1.371976e-50 | -8.615850e-47 |
| Msa0211860 | Msa0849200 | 0.810612 | 1.057012e-50 | -8.615850e-47 |
| Msa0226470 | Msa0849200 | 0.831138 | 1.977832e-55 | -8.615850e-47 |
| Msa0227400 | Msa0849200 | 0.825144 | 5.500403e-54 | -8.615850e-47 |
| Msa0376690 | Msa0849200 | 0.818669 | 1.737294e-52 | -8.615850e-47 |
| Msa0402330 | Msa0849200 | 0.816219 | 6.189055e-52 | -8.615850e-47 |
| Msa0419520 | Msa0849200 | 0.804608 | 1.990807e-49 | -8.615850e-47 |
| Msa0435220 | Msa0849200 | 0.803107 | 4.082434e-49 | -8.615850e-47 |
| Msa0458060 | Msa0849200 | 0.805278 | 1.441962e-49 | -8.615850e-47 |
| Msa0465550 | Msa0849200 | 0.828463 | 8.865803e-55 | -8.615850e-47 |
| Msa0471590 | Msa0849200 | 0.814136 | 1.796302e-51 | -8.615850e-47 |
| Msa0239450 | Msa0849200 | 0.809034 | 2.309186e-50 | -8.615850e-47 |
| Msa0291520 | Msa0849200 | 0.815760 | 7.838770e-52 | -8.615850e-47 |
| Msa0299330 | Msa0849200 | 0.805689 | 1.182255e-49 | -8.615850e-47 |
| Msa0355270 | Msa0849200 | 0.820686 | 6.017449e-53 | -8.615850e-47 |
| Msa0511490 | Msa0849200 | 0.808975 | 2.378159e-50 | -8.615850e-47 |
| Msa0514180 | Msa0849200 | 0.821372 | 4.181619e-53 | -8.615850e-47 |
| Msa0541860 | Msa0849200 | 0.822434 | 2.373905e-53 | -8.615850e-47 |
| Msa0542160 | Msa0849200 | 0.803197 | 3.909782e-49 | -8.615850e-47 |
| Msa0545060 | Msa0849200 | 0.818388 | 2.012219e-52 | -8.615850e-47 |
| Msa0546570 | Msa0849200 | 0.815116 | 1.090033e-51 | -8.615850e-47 |
| Msa0556790 | Msa0849200 | 0.818906 | 1.534972e-52 | -8.615850e-47 |
| Msa0558810 | Msa0849200 | 0.829061 | 6.355879e-55 | -8.615850e-47 |
| Msa0558840 | Msa0849200 | 0.806020 | 1.007281e-49 | -8.615850e-47 |
| Msa0581070 | Msa0849200 | 0.808585 | 2.881859e-50 | -8.615850e-47 |
| Msa0600600 | Msa0849200 | 0.812662 | 3.786724e-51 | -8.615850e-47 |
| Msa0849200 | Msa1006840 | 0.811477 | 6.864439e-51 | -8.615850e-47 |
| Msa0849200 | Msa1025940 | 0.814221 | 1.720273e-51 | -8.615850e-47 |
| Msa0849200 | Msa1040800 | 0.804864 | 1.760531e-49 | -8.615850e-47 |
| Msa0849200 | Msa1040840 | 0.812412 | 4.295513e-51 | -8.615850e-47 |
| Msa0849200 | Msa1041520 | 0.814128 | 1.803472e-51 | -8.615850e-47 |
| Msa0849200 | Msa1055410 | 0.830699 | 2.535064e-55 | -8.615850e-47 |
| Msa0849200 | Msa1081150 | 0.801066 | 1.072894e-48 | -8.615850e-47 |
| Msa0849200 | Msa1081560 | 0.832222 | 1.069409e-55 | -8.615850e-47 |
| Msa0849200 | Msa1083210 | 0.818444 | 1.954336e-52 | -8.615850e-47 |
| Msa0849200 | Msa1093330 | 0.826119 | 3.230642e-54 | -8.615850e-47 |
| Msa0849200 | Msa1104140 | 0.807322 | 5.348467e-50 | -8.615850e-47 |
| Msa0849200 | Msa1126770 | 0.804018 | 2.642496e-49 | -8.615850e-47 |
| Msa0849200 | Msa1127130 | 0.849569 | 2.971866e-60 | -8.615850e-47 |
| Msa0849200 | Msa1133400 | 0.803749 | 3.004740e-49 | -8.615850e-47 |
| Msa0849200 | Msa1152520 | 0.812229 | 4.708143e-51 | -8.615850e-47 |
| Msa0849200 | Msa1166410 | 0.830044 | 3.666121e-55 | -8.615850e-47 |
| Msa0849200 | Msa1174100 | 0.825622 | 4.239785e-54 | -8.615850e-47 |
| Msa0849200 | Msa1179950 | 0.840964 | 6.331393e-58 | -8.615850e-47 |
| Msa0849200 | Msa1179980 | 0.836903 | 7.121719e-57 | -8.615850e-47 |
| Msa0849200 | Msa1218600 | 0.821580 | 3.744167e-53 | -8.615850e-47 |
| Msa0849200 | Msa1227690 | 0.816900 | 4.357814e-52 | -8.615850e-47 |
| Msa0849200 | Msa1237940 | 0.821622 | 3.660480e-53 | -8.615850e-47 |
| Msa0849200 | Msa1254710 | 0.836133 | 1.118947e-56 | -8.615850e-47 |
| Msa0849200 | Msa1255040 | -0.821357 | 4.215336e-53 | -8.615850e-47 |
| Msa0849200 | Msa1265630 | 0.819053 | 1.421287e-52 | -8.615850e-47 |
| Msa0849200 | Msa1269300 | 0.800986 | 1.114247e-48 | -8.615850e-47 |
| Msa0849200 | Msa1270620 | 0.836423 | 9.439644e-57 | -8.615850e-47 |
| Msa0849200 | Msa1270690 | 0.835874 | 1.301456e-56 | -8.615850e-47 |
| Msa0849200 | Msa1283170 | 0.800096 | 1.691339e-48 | -8.615850e-47 |
| Msa0849200 | Msa1295110 | 0.818852 | 1.578701e-52 | -8.615850e-47 |
| Msa0849200 | Msa1306990 | 0.835982 | 1.221685e-56 | -8.615850e-47 |
| Msa0849200 | Msa1307950 | 0.806224 | 9.126109e-50 | -8.615850e-47 |
| Msa0849200 | Msa1316780 | 0.822735 | 2.020457e-53 | -8.615850e-47 |
| Msa0849200 | Msa1316830 | 0.830203 | 3.350978e-55 | -8.615850e-47 |
| Msa0849200 | Msa1345450 | 0.802891 | 4.523146e-49 | -8.615850e-47 |
| Msa0849200 | Msa1353060 | 0.813190 | 2.901188e-51 | -8.615850e-47 |
| Msa0849200 | Msa1355700 | 0.818508 | 1.889790e-52 | -8.615850e-47 |
| Msa0849200 | Msa1359390 | 0.822152 | 2.759481e-53 | -8.615850e-47 |
| Msa0849200 | Msa1360140 | 0.807823 | 4.187738e-50 | -8.615850e-47 |
| Msa0849200 | Msa1386230 | 0.801448 | 8.963623e-49 | -8.615850e-47 |
| Msa0849200 | Msa1389680 | 0.807073 | 6.039459e-50 | -8.615850e-47 |
| Msa0849200 | Msa1394290 | 0.805745 | 1.150932e-49 | -8.615850e-47 |
| Msa0849200 | Msa1397810 | 0.816154 | 6.401212e-52 | -8.615850e-47 |
| Msa0849200 | Msa1442700 | 0.811758 | 5.963907e-51 | -8.615850e-47 |
| Msa0849200 | Msa1442850 | 0.813489 | 2.494280e-51 | -8.615850e-47 |
| Msa0849200 | Msa1444310 | 0.812322 | 4.493193e-51 | -8.615850e-47 |
| Msa0849200 | Msa1461280 | 0.812111 | 4.997672e-51 | -8.615850e-47 |
| Msa0849200 | Msa1466300 | 0.806081 | 9.782233e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849200 | MtrunA17_Chr5g0423171 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 4.52e-88 | 251 |
| Msa0849200 | MtrunA17_Chr3g0104151 | 84.211 | 38 | 6 | 0 | 92 | 129 | 17 | 54 | 4.22e-13 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0849200 | AT1G29990.1 | 86.047 | 129 | 18 | 0 | 1 | 129 | 1 | 129 | 3.33e-77 | 224 |
Find 42 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCACAAATTCGATTTC+TGG | 0.151221 | 5_4:-35665674 | None:intergenic |
| ACCTTTCCACCTTCTTTCTT+TGG | 0.210529 | 5_4:-35671288 | None:intergenic |
| TGTTTAGTATTGTCTCATTA+TGG | 0.264108 | 5_4:+35671377 | Msa0849200:three_prime_UTR |
| AAGCATTAAGATCATGTTAA+TGG | 0.279081 | 5_4:+35671460 | Msa0849200:three_prime_UTR |
| TGATGCCACGGTTCAAGATT+TGG | 0.316433 | 5_4:+35670208 | Msa0849200:CDS |
| TGTACTTGTTAAGCAAGATT+TGG | 0.330090 | 5_4:+35666438 | Msa0849200:CDS |
| CGAAAATGAGCTCGTTCTTA+AGG | 0.364571 | 5_4:+35665944 | Msa0849200:CDS |
| TAGAGATCTTCAACGCGAAT+TGG | 0.368259 | 5_4:+35665743 | Msa0849200:CDS |
| TGCTCAAACAAACTTGTAGA+TGG | 0.369017 | 5_4:+35671348 | Msa0849200:three_prime_UTR |
| GCAAATGTTTACAAGTTGAT+TGG | 0.380956 | 5_4:+35666412 | Msa0849200:CDS |
| TGTGAGAGTGGTTTCTGTCT+TGG | 0.394070 | 5_4:-35671316 | None:intergenic |
| CGATCTCAACAAGCTTCAAA+AGG | 0.400711 | 5_4:+35665779 | Msa0849200:CDS |
| ACTTAAATAAAATAAAATAA+TGG | 0.409043 | 5_4:+35671509 | Msa0849200:three_prime_UTR |
| CAATCTCTGCAGGCTGGGAA+AGG | 0.456730 | 5_4:+35671163 | Msa0849200:CDS |
| AAGATGCAATCTCTGCAGGC+TGG | 0.465322 | 5_4:+35671157 | Msa0849200:CDS |
| ACTGTAACTTGACCGTTCAT+AGG | 0.485267 | 5_4:+35671218 | Msa0849200:three_prime_UTR |
| ACAAAAGATGCAATCTCTGC+AGG | 0.504546 | 5_4:+35671153 | Msa0849200:CDS |
| AATCTCTGCAGGCTGGGAAA+GGG | 0.505659 | 5_4:+35671164 | Msa0849200:CDS |
| AGATGCAATCTCTGCAGGCT+GGG | 0.519263 | 5_4:+35671158 | Msa0849200:CDS |
| AAATCTTGCTTAACAAGTAC+AGG | 0.520028 | 5_4:-35666436 | None:intergenic |
| TCTCTTGCGAACATTTGCAT+TGG | 0.528626 | 5_4:-35666467 | None:intergenic |
| GATCTCAACAAGCTTCAAAA+GGG | 0.534109 | 5_4:+35665780 | Msa0849200:CDS |
| TTTGGCATCAAAAGTCACAT+TGG | 0.541954 | 5_4:-35671270 | None:intergenic |
| TTCGATTTCTGGCACACTGA+GGG | 0.542358 | 5_4:-35665663 | None:intergenic |
| GCAGAATAGCAAGAAAGAAA+CGG | 0.544496 | 5_4:+35670238 | Msa0849200:CDS |
| CTCTTCCAAATCTTGAACCG+TGG | 0.545459 | 5_4:-35670213 | None:intergenic |
| TTACAGTAAACAAACAATCA+AGG | 0.551424 | 5_4:-35671202 | None:intergenic |
| CAGGAAGCGTCTTGATGCCA+CGG | 0.578703 | 5_4:+35670196 | Msa0849200:intron |
| GCAAAACTAGCATGTGAGAG+TGG | 0.587891 | 5_4:-35671328 | None:intergenic |
| TGTTAAGCAAGATTTGGCTG+AGG | 0.593363 | 5_4:+35666444 | Msa0849200:CDS |
| GCGTTGAAGATCTCTAATGT+TGG | 0.594934 | 5_4:-35665736 | None:intergenic |
| AATCGAATTTGTGAAAGCAA+AGG | 0.600362 | 5_4:+35665679 | Msa0849200:five_prime_UTR |
| TTGATGCCAAAGAAAGAAGG+TGG | 0.601133 | 5_4:+35671282 | Msa0849200:three_prime_UTR |
| AAGAAGTACACTATTCAACT+TGG | 0.603063 | 5_4:+35665921 | Msa0849200:CDS |
| GCCAAAGAAAGAAGGTGGAA+AGG | 0.618679 | 5_4:+35671287 | Msa0849200:three_prime_UTR |
| GTGAAAGCAAAGGAAGGAGG+AGG | 0.627755 | 5_4:+35665689 | Msa0849200:five_prime_UTR |
| TCTGCAGGCTGGGAAAGGGA+AGG | 0.640473 | 5_4:+35671168 | Msa0849200:CDS |
| GAATTTGTGAAAGCAAAGGA+AGG | 0.649479 | 5_4:+35665683 | Msa0849200:five_prime_UTR |
| GTAACTTGACCGTTCATAGG+TGG | 0.669511 | 5_4:+35671221 | Msa0849200:three_prime_UTR |
| TTTGTGAAAGCAAAGGAAGG+AGG | 0.670673 | 5_4:+35665686 | Msa0849200:five_prime_UTR |
| ACTCATTCACCACCTATGAA+CGG | 0.679282 | 5_4:-35671230 | None:intergenic |
| ATTCGATTTCTGGCACACTG+AGG | 0.682370 | 5_4:-35665664 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTTTTTTTAAATCT+CGG | - | chr5_4:35666136-35666155 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTTTTTCAAT+AGG | + | chr5_4:35666366-35666385 | Msa0849200:intron | 10.0% |
| !!! | AAAACTATTTTATCATTTAT+AGG | - | chr5_4:35667004-35667023 | None:intergenic | 10.0% |
| !!! | AATAAAATTCTAAAACAAAA+TGG | - | chr5_4:35668976-35668995 | None:intergenic | 10.0% |
| !! | AATAATTACAAAATAACATT+TGG | + | chr5_4:35670316-35670335 | Msa0849200:intron | 10.0% |
| !!! | GTTATTTATTTTCTTGATTT+TGG | + | chr5_4:35666529-35666548 | Msa0849200:intron | 15.0% |
| !! | AAATAATCACTTCAAAATAT+TGG | + | chr5_4:35666743-35666762 | Msa0849200:intron | 15.0% |
| !!! | TATTTTTTCGTTATTACTTT+TGG | + | chr5_4:35666853-35666872 | Msa0849200:intron | 15.0% |
| !! | TAATTTATTCATAGACAAAA+GGG | + | chr5_4:35666888-35666907 | Msa0849200:intron | 15.0% |
| !! | TAAAATTATGTATTAGCAAA+AGG | + | chr5_4:35667471-35667490 | Msa0849200:intron | 15.0% |
| !! | ATAAGATAATATGATGAATA+TGG | + | chr5_4:35667804-35667823 | Msa0849200:intron | 15.0% |
| !! | ATGAAATAGTATAATGAATA+TGG | + | chr5_4:35667827-35667846 | Msa0849200:intron | 15.0% |
| !!! | ATTTTGTATTCTAAAATATC+AGG | + | chr5_4:35669401-35669420 | Msa0849200:intron | 15.0% |
| !! | TTTGTAAGTTTGTAATAAAT+TGG | + | chr5_4:35669836-35669855 | Msa0849200:intron | 15.0% |
| !! | TTGTAAGTTTGTAATAAATT+GGG | + | chr5_4:35669837-35669856 | Msa0849200:intron | 15.0% |
| !!! | ATAAAAAGATGATTTTGTAT+TGG | - | chr5_4:35670046-35670065 | None:intergenic | 15.0% |
| !!! | ATAAGAGTATTTTAGTTAAA+AGG | + | chr5_4:35670923-35670942 | Msa0849200:intron | 15.0% |
| !!! | TTAAAAGGTATATTTTATCT+TGG | + | chr5_4:35670938-35670957 | Msa0849200:intron | 15.0% |
| !!! | TGTATTTAATTTTTCTTAAG+AGG | + | chr5_4:35670968-35670987 | Msa0849200:intron | 15.0% |
| !! | AAACCCTAAAATACATAAAA+GGG | - | chr5_4:35665972-35665991 | None:intergenic | 20.0% |
| !! | AAAACCCTAAAATACATAAA+AGG | - | chr5_4:35665973-35665992 | None:intergenic | 20.0% |
| !!! | TTGATTTTTGAATGTGTATT+CGG | + | chr5_4:35666184-35666203 | Msa0849200:intron | 20.0% |
| !!! | TTAGTTTGATAACTAGAATT+AGG | + | chr5_4:35666211-35666230 | Msa0849200:intron | 20.0% |
| !!! | TTTTTTTTTTCAATAGGAGT+TGG | + | chr5_4:35666372-35666391 | Msa0849200:intron | 20.0% |
| !!! | ATTTATTTTCTTGATTTTGG+AGG | + | chr5_4:35666532-35666551 | Msa0849200:intron | 20.0% |
| !! | GTAATTTATTCATAGACAAA+AGG | + | chr5_4:35666887-35666906 | Msa0849200:intron | 20.0% |
| !! | ATAGGATACAAGAAAAAAAA+TGG | - | chr5_4:35666986-35667005 | None:intergenic | 20.0% |
| !!! | TTAGAGAAATATGTTGTTTA+AGG | + | chr5_4:35667105-35667124 | Msa0849200:intron | 20.0% |
| !! | TACAAAAATAAGGATGAAAA+TGG | + | chr5_4:35667220-35667239 | Msa0849200:intron | 20.0% |
| !! | TTGTAGTAGATAAATAACTT+TGG | + | chr5_4:35667573-35667592 | Msa0849200:intron | 20.0% |
| !! | AATAGTATAATGAATATGGA+TGG | + | chr5_4:35667831-35667850 | Msa0849200:intron | 20.0% |
| !! | TAACATAACAAAAAATAGCA+AGG | + | chr5_4:35668383-35668402 | Msa0849200:intron | 20.0% |
| !!! | TGATTAAACATTTTAAGAAG+TGG | + | chr5_4:35668779-35668798 | Msa0849200:intron | 20.0% |
| !!! | TTTGTATTTCAAGTTCTTAT+TGG | + | chr5_4:35668914-35668933 | Msa0849200:intron | 20.0% |
| !! | ATAATACATATTGTTCGATA+TGG | + | chr5_4:35668946-35668965 | Msa0849200:intron | 20.0% |
| !! | CTTGAAAAGAGTTTATAAAA+AGG | + | chr5_4:35669283-35669302 | Msa0849200:intron | 20.0% |
| !! | ATGTTTAATTACATCAGTAT+TGG | + | chr5_4:35669371-35669390 | Msa0849200:intron | 20.0% |
| !!! | ATGTAACATTTTTTACTTAG+CGG | - | chr5_4:35669739-35669758 | None:intergenic | 20.0% |
| !!! | CTTCATTTTAGATATTGTTA+TGG | + | chr5_4:35670099-35670118 | Msa0849200:intron | 20.0% |
| !!! | GACTTTTAAATTATTTCTCA+TGG | + | chr5_4:35670291-35670310 | Msa0849200:intron | 20.0% |
| !! | ATACAAAAACGTATATTTCA+AGG | - | chr5_4:35671420-35671439 | None:intergenic | 20.0% |
| !! | AAAAAGATGAACGATTTTGA+AGG | - | chr5_4:35665856-35665875 | None:intergenic | 25.0% |
| !! | GTACCCTTTTATGTATTTTA+GGG | + | chr5_4:35665966-35665985 | Msa0849200:intron | 25.0% |
| !!! | TTTTTTTAAATCTCGGTATC+CGG | - | chr5_4:35666129-35666148 | None:intergenic | 25.0% |
| ! | TAGAATTAGGATACAAACTA+AGG | + | chr5_4:35666224-35666243 | Msa0849200:intron | 25.0% |
| !! | TGGTAATTTTTGATACGTTT+AGG | + | chr5_4:35666253-35666272 | Msa0849200:intron | 25.0% |
| !!! | ATGAAACAGATCATTTTTCT+AGG | - | chr5_4:35666582-35666601 | None:intergenic | 25.0% |
| ! | TTCAACATATGCAAACATAT+CGG | - | chr5_4:35666811-35666830 | None:intergenic | 25.0% |
| !!! | ATTACTTTTGGATGAAGAAT+AGG | + | chr5_4:35666865-35666884 | Msa0849200:intron | 25.0% |
| ! | AATTCATTGTTTGTAAGTAC+AGG | - | chr5_4:35666932-35666951 | None:intergenic | 25.0% |
| ! | AACAATGAATTTGACTATCT+TGG | + | chr5_4:35666941-35666960 | Msa0849200:intron | 25.0% |
| ! | ATCAACAAAAATCAAGTCTA+TGG | - | chr5_4:35667062-35667081 | None:intergenic | 25.0% |
| !! | AGAAATATGTTGTTTAAGGA+TGG | + | chr5_4:35667109-35667128 | Msa0849200:intron | 25.0% |
| !! | GAAATATGTTGTTTAAGGAT+GGG | + | chr5_4:35667110-35667129 | Msa0849200:intron | 25.0% |
| !!! | TCATCCTTATTTTTGTACAA+TGG | - | chr5_4:35667217-35667236 | None:intergenic | 25.0% |
| ! | TTTATCTACTACAATCTACA+AGG | - | chr5_4:35667567-35667586 | None:intergenic | 25.0% |
| ! | GAATAGTGTTATATTAATCC+TGG | + | chr5_4:35667853-35667872 | Msa0849200:intron | 25.0% |
| ! | TAGTTAAGTATGTGTATAAG+AGG | - | chr5_4:35668186-35668205 | None:intergenic | 25.0% |
| ! | TTATACACATACTTAACTAG+TGG | + | chr5_4:35668187-35668206 | Msa0849200:intron | 25.0% |
| !! | AGAATCATTTGGTTAGTTAT+AGG | - | chr5_4:35668492-35668511 | None:intergenic | 25.0% |
| ! | GAAATACAAAGAGAGTAAAT+TGG | - | chr5_4:35668904-35668923 | None:intergenic | 25.0% |
| ! | ACATGAAAGTCTTGAAATTT+GGG | - | chr5_4:35669355-35669374 | None:intergenic | 25.0% |
| ! | AACATGAAAGTCTTGAAATT+TGG | - | chr5_4:35669356-35669375 | None:intergenic | 25.0% |
| ! | ATAAAACAGTATCACAATGA+GGG | - | chr5_4:35669696-35669715 | None:intergenic | 25.0% |
| ! | AATAAAACAGTATCACAATG+AGG | - | chr5_4:35669697-35669716 | None:intergenic | 25.0% |
| !!! | TGATACTGTTTTATTTTTGC+TGG | + | chr5_4:35669702-35669721 | Msa0849200:intron | 25.0% |
| ! | TGTAATAAATTGGGAAGTTA+AGG | + | chr5_4:35669846-35669865 | Msa0849200:intron | 25.0% |
| ! | GTAATAAATTGGGAAGTTAA+GGG | + | chr5_4:35669847-35669866 | Msa0849200:intron | 25.0% |
| ! | AAGTTAAGGGAAAAATATGT+TGG | + | chr5_4:35669860-35669879 | Msa0849200:intron | 25.0% |
| !! | AAAATATGTTGGTCAGTTTT+TGG | + | chr5_4:35669871-35669890 | Msa0849200:intron | 25.0% |
| ! | TTTGGTAGAATAACATTTAG+TGG | + | chr5_4:35670377-35670396 | Msa0849200:intron | 25.0% |
| ! | TTGGTAGAATAACATTTAGT+GGG | + | chr5_4:35670378-35670397 | Msa0849200:intron | 25.0% |
| ! | TTCGTTGAGATACAAATAAA+CGG | - | chr5_4:35670851-35670870 | None:intergenic | 25.0% |
| !!! | CTCATATTATGTGTCATTTA+AGG | - | chr5_4:35671007-35671026 | None:intergenic | 25.0% |
| ! | CCTATAAAGACATACAAATT+TGG | - | chr5_4:35671046-35671065 | None:intergenic | 25.0% |
| ! | CCAAATTTGTATGTCTTTAT+AGG | + | chr5_4:35671043-35671062 | Msa0849200:intron | 25.0% |
| ! | TTACAGTAAACAAACAATCA+AGG | - | chr5_4:35671205-35671224 | None:intergenic | 25.0% |
| ! | TGTTTAGTATTGTCTCATTA+TGG | + | chr5_4:35671377-35671396 | Msa0849200:three_prime_UTR | 25.0% |
| ! | AAGCATTAAGATCATGTTAA+TGG | + | chr5_4:35671460-35671479 | Msa0849200:three_prime_UTR | 25.0% |
| AATCGAATTTGTGAAAGCAA+AGG | + | chr5_4:35665679-35665698 | Msa0849200:five_prime_UTR | 30.0% | |
| !! | TGAACGATTTTGAAGGAATT+AGG | - | chr5_4:35665849-35665868 | None:intergenic | 30.0% |
| ! | AAGAAGTACACTATTCAACT+TGG | + | chr5_4:35665921-35665940 | Msa0849200:CDS | 30.0% |
| ! | GGTACCCTTTTATGTATTTT+AGG | + | chr5_4:35665965-35665984 | Msa0849200:intron | 30.0% |
| !! | TTTTACCAAGCTTGTTCTTA+AGG | + | chr5_4:35666003-35666022 | Msa0849200:intron | 30.0% |
| ! | CAAAAACCAAACCATCATTT+TGG | - | chr5_4:35666316-35666335 | None:intergenic | 30.0% |
| !! | GCAAATGTTTACAAGTTGAT+TGG | + | chr5_4:35666412-35666431 | Msa0849200:CDS | 30.0% |
| AAATCTTGCTTAACAAGTAC+AGG | - | chr5_4:35666439-35666458 | None:intergenic | 30.0% | |
| ! | TGTACTTGTTAAGCAAGATT+TGG | + | chr5_4:35666438-35666457 | Msa0849200:CDS | 30.0% |
| GTTACATGATTTGATTCATC+TGG | + | chr5_4:35666627-35666646 | Msa0849200:intron | 30.0% | |
| TTGATTGAAAAGTAACCACT+TGG | + | chr5_4:35666685-35666704 | Msa0849200:intron | 30.0% | |
| AACCACTTGGAATGTTTATT+AGG | + | chr5_4:35666698-35666717 | Msa0849200:intron | 30.0% | |
| ACCACTTGGAATGTTTATTA+GGG | + | chr5_4:35666699-35666718 | Msa0849200:intron | 30.0% | |
| TCAACATATGCAAACATATC+GGG | - | chr5_4:35666810-35666829 | None:intergenic | 30.0% | |
| AAAATGGAAATCAACTGTTC+AGG | - | chr5_4:35666970-35666989 | None:intergenic | 30.0% | |
| GCTTCCATTGTACAAAAATA+AGG | + | chr5_4:35667210-35667229 | Msa0849200:intron | 30.0% | |
| TACATTTGATGAGCTTACAA+TGG | - | chr5_4:35667305-35667324 | None:intergenic | 30.0% | |
| ! | ATTAGCAAAAGGTGTATGTT+AGG | + | chr5_4:35667482-35667501 | Msa0849200:intron | 30.0% |
| AGCAGACGATTAAACTTTAT+CGG | + | chr5_4:35667519-35667538 | Msa0849200:intron | 30.0% | |
| ! | ATAACTTTGGCTAGTTAGTT+TGG | + | chr5_4:35667586-35667605 | Msa0849200:intron | 30.0% |
| TGTCTAATCACATGCATTTA+CGG | - | chr5_4:35667658-35667677 | None:intergenic | 30.0% | |
| CATTGCGATACAATTGAAAA+TGG | - | chr5_4:35667757-35667776 | None:intergenic | 30.0% | |
| ! | TTTGGAGTTATTAGGAAATG+AGG | - | chr5_4:35667971-35667990 | None:intergenic | 30.0% |
| AATCCAATAAGTAGATAGGA+GGG | - | chr5_4:35668010-35668029 | None:intergenic | 30.0% | |
| TAAGTATGTGTATAAGAGGA+GGG | - | chr5_4:35668182-35668201 | None:intergenic | 30.0% | |
| TTAAGTATGTGTATAAGAGG+AGG | - | chr5_4:35668183-35668202 | None:intergenic | 30.0% | |
| ! | ATAATCAGATTGACTCTGAT+AGG | - | chr5_4:35668213-35668232 | None:intergenic | 30.0% |
| AGGTATCTTGAAGAATCATT+TGG | - | chr5_4:35668503-35668522 | None:intergenic | 30.0% | |
| AGAGGAGAAATCTAATACAA+GGG | - | chr5_4:35668544-35668563 | None:intergenic | 30.0% | |
| TATGAAAACCTACCACATAT+TGG | + | chr5_4:35668628-35668647 | Msa0849200:intron | 30.0% | |
| ATGAAAACCTACCACATATT+GGG | + | chr5_4:35668629-35668648 | Msa0849200:intron | 30.0% | |
| !! | TTTTAAGAAGTGGAGAGTTT+AGG | + | chr5_4:35668789-35668808 | Msa0849200:intron | 30.0% |
| TACAAAGAGAGTAAATTGGT+AGG | - | chr5_4:35668900-35668919 | None:intergenic | 30.0% | |
| CATGAAAGTCTTGAAATTTG+GGG | - | chr5_4:35669354-35669373 | None:intergenic | 30.0% | |
| ! | CTTGTCAAATTCTTTTGACA+TGG | + | chr5_4:35669627-35669646 | Msa0849200:intron | 30.0% |
| TAAAACAGTATCACAATGAG+GGG | - | chr5_4:35669695-35669714 | None:intergenic | 30.0% | |
| AATGCACAATAACTGTTCTA+AGG | - | chr5_4:35669790-35669809 | None:intergenic | 30.0% | |
| !!! | TCAGTTTTTGGTTAAGGAAT+TGG | + | chr5_4:35669883-35669902 | Msa0849200:intron | 30.0% |
| !!! | TTTTTGGTTAAGGAATTGGA+AGG | + | chr5_4:35669887-35669906 | Msa0849200:intron | 30.0% |
| !! | TTTTGGTTAAGGAATTGGAA+GGG | + | chr5_4:35669888-35669907 | Msa0849200:intron | 30.0% |
| CAATACAACATAAAGAGACA+AGG | - | chr5_4:35669965-35669984 | None:intergenic | 30.0% | |
| TCTACCAAATATACCTTTAG+AGG | - | chr5_4:35670366-35670385 | None:intergenic | 30.0% | |
| ATCAAGCAAAATAATGCACA+TGG | - | chr5_4:35670495-35670514 | None:intergenic | 30.0% | |
| TCTTGTGTAAAAACAGAGTA+AGG | - | chr5_4:35670656-35670675 | None:intergenic | 30.0% | |
| !!! | TTACTCTGTTTTTACACAAG+AGG | + | chr5_4:35670655-35670674 | Msa0849200:intron | 30.0% |
| TTATGTGACTAAAAGGTCAA+GGG | - | chr5_4:35670699-35670718 | None:intergenic | 30.0% | |
| AGAGTTGTTATGTGACTAAA+AGG | - | chr5_4:35670706-35670725 | None:intergenic | 30.0% | |
| ACTTAATATAAGCCGAAAGA+GGG | - | chr5_4:35670746-35670765 | None:intergenic | 30.0% | |
| AACTTAATATAAGCCGAAAG+AGG | - | chr5_4:35670747-35670766 | None:intergenic | 30.0% | |
| TCGTTGAGATACAAATAAAC+GGG | - | chr5_4:35670850-35670869 | None:intergenic | 30.0% | |
| TTCTACTTAACTACTCTACT+TGG | + | chr5_4:35670886-35670905 | Msa0849200:intron | 30.0% | |
| !!! | TAATGCTTTTAGTTTGTGTG+TGG | - | chr5_4:35671448-35671467 | None:intergenic | 30.0% |
| GCTTTCACAAATTCGATTTC+TGG | - | chr5_4:35665677-35665696 | None:intergenic | 35.0% | |
| GAATTTGTGAAAGCAAAGGA+AGG | + | chr5_4:35665683-35665702 | Msa0849200:five_prime_UTR | 35.0% | |
| GATCTCAACAAGCTTCAAAA+GGG | + | chr5_4:35665780-35665799 | Msa0849200:CDS | 35.0% | |
| !! | TGTTCTTAAGGTACCCTTTT+AGG | + | chr5_4:35666015-35666034 | Msa0849200:intron | 35.0% |
| !! | GTTCTTAAGGTACCCTTTTA+GGG | + | chr5_4:35665957-35665976 | Msa0849200:intron | 35.0% |
| GATACAAACTAAGGATGCAT+TGG | + | chr5_4:35666233-35666252 | Msa0849200:intron | 35.0% | |
| TTAGGACCAAAATGATGGTT+TGG | + | chr5_4:35666307-35666326 | Msa0849200:intron | 35.0% | |
| ! | CTAAGTGTCACTGATTGTTA+TGG | + | chr5_4:35666336-35666355 | Msa0849200:intron | 35.0% |
| TACATTTCAGCTGAACTGTA+AGG | + | chr5_4:35666496-35666515 | Msa0849200:intron | 35.0% | |
| ATGATTTGATTCATCTGGCA+CGG | + | chr5_4:35666632-35666651 | Msa0849200:intron | 35.0% | |
| CCACTTGGAATGTTTATTAG+GGG | + | chr5_4:35666700-35666719 | Msa0849200:intron | 35.0% | |
| CTTTCTATGCTTCACAATAG+CGG | - | chr5_4:35667336-35667355 | None:intergenic | 35.0% | |
| TTGTGAAGCATAGAAAGAGT+CGG | + | chr5_4:35667339-35667358 | Msa0849200:intron | 35.0% | |
| TATGACTAGAGCCTATAACA+AGG | + | chr5_4:35667401-35667420 | Msa0849200:intron | 35.0% | |
| TACGAAAGATGAAGACAGTA+AGG | - | chr5_4:35667444-35667463 | None:intergenic | 35.0% | |
| ACTGTCTTCATCTTTCGTAT+AGG | + | chr5_4:35667445-35667464 | Msa0849200:intron | 35.0% | |
| GGTCTGCTAAATAAAGATAC+AGG | + | chr5_4:35667540-35667559 | Msa0849200:intron | 35.0% | |
| ATGCATGTGATTAGACATAC+TGG | + | chr5_4:35667661-35667680 | Msa0849200:intron | 35.0% | |
| TGCATGTGATTAGACATACT+GGG | + | chr5_4:35667662-35667681 | Msa0849200:intron | 35.0% | |
| ATTGAACTGAAGGAAAGAAC+AGG | - | chr5_4:35667717-35667736 | None:intergenic | 35.0% | |
| !! | AGACTCAAGTATTGAACTGA+AGG | - | chr5_4:35667727-35667746 | None:intergenic | 35.0% |
| TATATTAATCCTGGACTCCT+TGG | + | chr5_4:35667862-35667881 | Msa0849200:intron | 35.0% | |
| ! | ATAGTTTTCCATTTCCTCCA+AGG | - | chr5_4:35667882-35667901 | None:intergenic | 35.0% |
| ATCCAATAAGTAGATAGGAG+GGG | - | chr5_4:35668009-35668028 | None:intergenic | 35.0% | |
| GAATCCAATAAGTAGATAGG+AGG | - | chr5_4:35668011-35668030 | None:intergenic | 35.0% | |
| GGAGAATCCAATAAGTAGAT+AGG | - | chr5_4:35668014-35668033 | None:intergenic | 35.0% | |
| TCAAGAATAACAGAATGGAC+AGG | - | chr5_4:35668076-35668095 | None:intergenic | 35.0% | |
| TATAAGAGGAGGGATAAAAG+AGG | - | chr5_4:35668172-35668191 | None:intergenic | 35.0% | |
| AATGCTACCAAAGAAAACAG+AGG | - | chr5_4:35668274-35668293 | None:intergenic | 35.0% | |
| CAAGGAAAATGCTGTAAAGA+AGG | + | chr5_4:35668401-35668420 | Msa0849200:intron | 35.0% | |
| CAGAGGAGAAATCTAATACA+AGG | - | chr5_4:35668545-35668564 | None:intergenic | 35.0% | |
| TCATAAGAAGTAGGAATGAG+CGG | - | chr5_4:35668613-35668632 | None:intergenic | 35.0% | |
| ! | GGTAGGTTTTCATAAGAAGT+AGG | - | chr5_4:35668622-35668641 | None:intergenic | 35.0% |
| CAACATAAACCACACTAACA+GGG | - | chr5_4:35668669-35668688 | None:intergenic | 35.0% | |
| CTGTTAGTGTGGTTTATGTT+GGG | + | chr5_4:35668668-35668687 | Msa0849200:intron | 35.0% | |
| ! | AAGCAGAGGATTAAACCTTT+TGG | + | chr5_4:35668704-35668723 | Msa0849200:intron | 35.0% |
| ! | AGCAGAGGATTAAACCTTTT+GGG | + | chr5_4:35668705-35668724 | Msa0849200:intron | 35.0% |
| AAAGGAAGAGAGTAAAGAGA+AGG | + | chr5_4:35668734-35668753 | Msa0849200:intron | 35.0% | |
| AAGGAAGAGAGTAAAGAGAA+GGG | + | chr5_4:35668735-35668754 | Msa0849200:intron | 35.0% | |
| GGTCAGAAAAAAGAGAGAAA+AGG | - | chr5_4:35668872-35668891 | None:intergenic | 35.0% | |
| AGAGAGTAAATTGGTAGGAA+CGG | - | chr5_4:35668895-35668914 | None:intergenic | 35.0% | |
| GTTACTACCTAAATGATCTC+AGG | + | chr5_4:35668998-35669017 | Msa0849200:intron | 35.0% | |
| TCACAGAAACAAAGATCAAG+AGG | - | chr5_4:35669113-35669132 | None:intergenic | 35.0% | |
| TGTAAATTCCGCCTTAATTG+CGG | + | chr5_4:35669143-35669162 | Msa0849200:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr5_4:35669330-35669349 | None:intergenic | 35.0% | |
| GATTTGCACAAAGCACAAAT+AGG | - | chr5_4:35669537-35669556 | None:intergenic | 35.0% | |
| !!! | AACAACCCTCGTTTTTTAGT+CGG | - | chr5_4:35669581-35669600 | None:intergenic | 35.0% |
| CTAAAAAACGAGGGTTGTTT+AGG | + | chr5_4:35669582-35669601 | Msa0849200:intron | 35.0% | |
| TTACATTTAGAGACCAAAGC+AGG | + | chr5_4:35669753-35669772 | Msa0849200:intron | 35.0% | |
| !!! | TGTTGGTCAGTTTTTGGTTA+AGG | + | chr5_4:35669877-35669896 | Msa0849200:intron | 35.0% |
| ! | ACAGATTGCTGCATGTTTTA+TGG | + | chr5_4:35670076-35670095 | Msa0849200:intron | 35.0% |
| GCAGAATAGCAAGAAAGAAA+CGG | + | chr5_4:35670238-35670257 | Msa0849200:CDS | 35.0% | |
| ! | TAGGCCTCTAAAGGTATATT+TGG | + | chr5_4:35670359-35670378 | Msa0849200:intron | 35.0% |
| ! | AGAGCATAGAAGTGTAGAAA+AGG | + | chr5_4:35670557-35670576 | Msa0849200:intron | 35.0% |
| ! | GAGCATAGAAGTGTAGAAAA+GGG | + | chr5_4:35670558-35670577 | Msa0849200:intron | 35.0% |
| CATACAATACACCAAATGGT+GGG | - | chr5_4:35670630-35670649 | None:intergenic | 35.0% | |
| GTTATGTGACTAAAAGGTCA+AGG | - | chr5_4:35670700-35670719 | None:intergenic | 35.0% | |
| TTTGGCATCAAAAGTCACAT+TGG | - | chr5_4:35671273-35671292 | None:intergenic | 35.0% | |
| ! | CTTTTGATGCCAAAGAAAGA+AGG | + | chr5_4:35671279-35671298 | Msa0849200:three_prime_UTR | 35.0% |
| TGCTCAAACAAACTTGTAGA+TGG | + | chr5_4:35671348-35671367 | Msa0849200:three_prime_UTR | 35.0% | |
| TTTGTGAAAGCAAAGGAAGG+AGG | + | chr5_4:35665686-35665705 | Msa0849200:five_prime_UTR | 40.0% | |
| GCGTTGAAGATCTCTAATGT+TGG | - | chr5_4:35665739-35665758 | None:intergenic | 40.0% | |
| TAGAGATCTTCAACGCGAAT+TGG | + | chr5_4:35665743-35665762 | Msa0849200:CDS | 40.0% | |
| CGATCTCAACAAGCTTCAAA+AGG | + | chr5_4:35665779-35665798 | Msa0849200:CDS | 40.0% | |
| CGAAAATGAGCTCGTTCTTA+AGG | + | chr5_4:35665944-35665963 | Msa0849200:CDS | 40.0% | |
| GGTATGAAGTGACCCTAAAA+GGG | - | chr5_4:35666031-35666050 | None:intergenic | 40.0% | |
| ATTGAAGCCAGAACAAAGCT+CGG | - | chr5_4:35666052-35666071 | None:intergenic | 40.0% | |
| !! | AGCTTTGTTCTGGCTTCAAT+TGG | + | chr5_4:35666052-35666071 | Msa0849200:intron | 40.0% |
| !! | GCTTTGTTCTGGCTTCAATT+GGG | + | chr5_4:35666053-35666072 | Msa0849200:intron | 40.0% |
| !! | TCTCGGATTAGTTGGTCTTT+GGG | + | chr5_4:35666103-35666122 | Msa0849200:intron | 40.0% |
| ! | TTTTGGTCCTAAACGTGTGA+TGG | - | chr5_4:35666299-35666318 | None:intergenic | 40.0% |
| ! | CACGTTTAGGACCAAAATGA+TGG | + | chr5_4:35666302-35666321 | Msa0849200:intron | 40.0% |
| TGTTAAGCAAGATTTGGCTG+AGG | + | chr5_4:35666444-35666463 | Msa0849200:CDS | 40.0% | |
| TCTCTTGCGAACATTTGCAT+TGG | - | chr5_4:35666470-35666489 | None:intergenic | 40.0% | |
| TGATTTGATTCATCTGGCAC+GGG | + | chr5_4:35666633-35666652 | Msa0849200:intron | 40.0% | |
| CCCCTAATAAACATTCCAAG+TGG | - | chr5_4:35666703-35666722 | None:intergenic | 40.0% | |
| TGCAAACATATCGGGAAGAA+GGG | - | chr5_4:35666802-35666821 | None:intergenic | 40.0% | |
| ATGCAAACATATCGGGAAGA+AGG | - | chr5_4:35666803-35666822 | None:intergenic | 40.0% | |
| CAACACAAGTCAACATTTGG+TGG | - | chr5_4:35667146-35667165 | None:intergenic | 40.0% | |
| CCTCAACACAAGTCAACATT+TGG | - | chr5_4:35667149-35667168 | None:intergenic | 40.0% | |
| !! | CCAAATGTTGACTTGTGTTG+AGG | + | chr5_4:35667146-35667165 | Msa0849200:intron | 40.0% |
| !! | TTGACTTGTGTTGAGGAGTT+TGG | + | chr5_4:35667153-35667172 | Msa0849200:intron | 40.0% |
| AGGTGTATGTTAGGAGAGAT+AGG | + | chr5_4:35667491-35667510 | Msa0849200:intron | 40.0% | |
| TATGTTAGGAGAGATAGGAG+AGG | + | chr5_4:35667496-35667515 | Msa0849200:intron | 40.0% | |
| ! | CTTTGGCTAGTTAGTTTGGA+AGG | + | chr5_4:35667590-35667609 | Msa0849200:intron | 40.0% |
| CTTTCTTTCATTCCCTTCCT+AGG | - | chr5_4:35667625-35667644 | None:intergenic | 40.0% | |
| CTAGGAAGGGAATGAAAGAA+AGG | + | chr5_4:35667623-35667642 | Msa0849200:intron | 40.0% | |
| ATGTGATTAGACATACTGGG+AGG | + | chr5_4:35667665-35667684 | Msa0849200:intron | 40.0% | |
| GAATTGTTGTCATGCCAGTA+GGG | - | chr5_4:35667939-35667958 | None:intergenic | 40.0% | |
| TGAATTGTTGTCATGCCAGT+AGG | - | chr5_4:35667940-35667959 | None:intergenic | 40.0% | |
| GCATGACAACAATTCACACT+CGG | + | chr5_4:35667944-35667963 | Msa0849200:intron | 40.0% | |
| !!! | GGGGAGTTTTTGGAGTTATT+AGG | - | chr5_4:35667979-35667998 | None:intergenic | 40.0% |
| AATAAGTAGATAGGAGGGGA+AGG | - | chr5_4:35668005-35668024 | None:intergenic | 40.0% | |
| TTCCCCTCCTATCTACTTAT+TGG | + | chr5_4:35668004-35668023 | Msa0849200:intron | 40.0% | |
| AAGGATTGGAGGATCATGAT+TGG | - | chr5_4:35668045-35668064 | None:intergenic | 40.0% | |
| AGAATAACAGAATGGACAGG+TGG | - | chr5_4:35668073-35668092 | None:intergenic | 40.0% | |
| AGGGGTCAAGAATAACAGAA+TGG | - | chr5_4:35668081-35668100 | None:intergenic | 40.0% | |
| AGAGAAGACGCTCAAGTATT+AGG | - | chr5_4:35668142-35668161 | None:intergenic | 40.0% | |
| GTTGAATGATCAGCACATTG+AGG | - | chr5_4:35668302-35668321 | None:intergenic | 40.0% | |
| CTGTAAAGAAGGAAACACAG+CGG | + | chr5_4:35668412-35668431 | Msa0849200:intron | 40.0% | |
| GGAATTGAAACCATATGGCA+GGG | - | chr5_4:35668592-35668611 | None:intergenic | 40.0% | |
| TGAGCGGAATTGAAACCATA+TGG | - | chr5_4:35668597-35668616 | None:intergenic | 40.0% | |
| CCAACATAAACCACACTAAC+AGG | - | chr5_4:35668670-35668689 | None:intergenic | 40.0% | |
| CCTGTTAGTGTGGTTTATGT+TGG | + | chr5_4:35668667-35668686 | Msa0849200:intron | 40.0% | |
| TGGTTTATGTTGGGAGAAGT+TGG | + | chr5_4:35668677-35668696 | Msa0849200:intron | 40.0% | |
| !! | AAACCTTTTGGGTCAGTCAA+AGG | + | chr5_4:35668716-35668735 | Msa0849200:intron | 40.0% |
| AGAGTAAAGAGAAGGGTTAG+AGG | + | chr5_4:35668742-35668761 | Msa0849200:intron | 40.0% | |
| AGAGTAAATTGGTAGGAACG+GGG | - | chr5_4:35668893-35668912 | None:intergenic | 40.0% | |
| GAGAGTAAATTGGTAGGAAC+GGG | - | chr5_4:35668894-35668913 | None:intergenic | 40.0% | |
| AAGACGTCCTGAGATCATTT+AGG | - | chr5_4:35669008-35669027 | None:intergenic | 40.0% | |
| TAAATGATCTCAGGACGTCT+TGG | + | chr5_4:35669007-35669026 | Msa0849200:intron | 40.0% | |
| AAACTTCCAAGTCAGCAGAT+TGG | - | chr5_4:35669079-35669098 | None:intergenic | 40.0% | |
| !! | AACAAAGATCAAGAGGTGTC+AGG | - | chr5_4:35669106-35669125 | None:intergenic | 40.0% |
| AAACCCAAAGGTCGCAATTT+AGG | - | chr5_4:35669183-35669202 | None:intergenic | 40.0% | |
| TGTAATGAAGGCAAACCCAA+AGG | - | chr5_4:35669195-35669214 | None:intergenic | 40.0% | |
| !! | CAACACAATGAAGGTGTTAG+AGG | - | chr5_4:35669219-35669238 | None:intergenic | 40.0% |
| CTCTAACACCTTCATTGTGT+TGG | + | chr5_4:35669217-35669236 | Msa0849200:intron | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr5_4:35669226-35669245 | Msa0849200:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr5_4:35669227-35669246 | Msa0849200:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr5_4:35669328-35669347 | Msa0849200:intron | 40.0% |
| !!! | ACAACCCTCGTTTTTTAGTC+GGG | - | chr5_4:35669580-35669599 | None:intergenic | 40.0% |
| ! | CAAATTCTTTTGACATGGCC+AGG | + | chr5_4:35669632-35669651 | Msa0849200:intron | 40.0% |
| ! | AGGATAGATGTTGGTTAACG+TGG | - | chr5_4:35669662-35669681 | None:intergenic | 40.0% |
| AGGACAACAAGGATAGATGT+TGG | - | chr5_4:35669671-35669690 | None:intergenic | 40.0% | |
| GATTCCAAGCTCTCAATACT+TGG | + | chr5_4:35669916-35669935 | Msa0849200:intron | 40.0% | |
| CAAGCTCTCAATACTTGGAA+GGG | + | chr5_4:35669921-35669940 | Msa0849200:intron | 40.0% | |
| TTATACGGTCTTTGTGTGTC+AGG | + | chr5_4:35670177-35670196 | Msa0849200:intron | 40.0% | |
| !! | AGATCCTAGCTCTACTAGAT+AGG | + | chr5_4:35670340-35670359 | Msa0849200:intron | 40.0% |
| TCTACTAGATAGGCCTCTAA+AGG | + | chr5_4:35670350-35670369 | Msa0849200:intron | 40.0% | |
| CATTAAGACTACCCTAGACA+AGG | - | chr5_4:35670411-35670430 | None:intergenic | 40.0% | |
| GCATACAATACACCAAATGG+TGG | - | chr5_4:35670631-35670650 | None:intergenic | 40.0% | |
| !! | TTACACAAGAGGCTGTTTCT+TGG | + | chr5_4:35670666-35670685 | Msa0849200:intron | 40.0% |
| ACAAAAGATGCAATCTCTGC+AGG | + | chr5_4:35671153-35671172 | Msa0849200:CDS | 40.0% | |
| ACTGTAACTTGACCGTTCAT+AGG | + | chr5_4:35671218-35671237 | Msa0849200:three_prime_UTR | 40.0% | |
| ACTCATTCACCACCTATGAA+CGG | - | chr5_4:35671233-35671252 | None:intergenic | 40.0% | |
| TTGATGCCAAAGAAAGAAGG+TGG | + | chr5_4:35671282-35671301 | Msa0849200:three_prime_UTR | 40.0% | |
| ACCTTTCCACCTTCTTTCTT+TGG | - | chr5_4:35671291-35671310 | None:intergenic | 40.0% | |
| !! | TTCGATTTCTGGCACACTGA+GGG | - | chr5_4:35665666-35665685 | None:intergenic | 45.0% |
| !! | ATTCGATTTCTGGCACACTG+AGG | - | chr5_4:35665667-35665686 | None:intergenic | 45.0% |
| GGGTACCTTAAGAACAAGCT+TGG | - | chr5_4:35666011-35666030 | None:intergenic | 45.0% | |
| CGGTATGAAGTGACCCTAAA+AGG | - | chr5_4:35666032-35666051 | None:intergenic | 45.0% | |
| !! | CTTCATACCGAGCTTTGTTC+TGG | + | chr5_4:35666042-35666061 | Msa0849200:intron | 45.0% |
| CTTCAATTGGGTTCTGCTAG+TGG | + | chr5_4:35666065-35666084 | Msa0849200:intron | 45.0% | |
| !! | GATTGGTCTCTCGGATTAGT+TGG | + | chr5_4:35666095-35666114 | Msa0849200:intron | 45.0% |
| !! | CTCTCGGATTAGTTGGTCTT+TGG | + | chr5_4:35666102-35666121 | Msa0849200:intron | 45.0% |
| CGTTAACTGTAGTTACGTCC+AGG | + | chr5_4:35666769-35666788 | Msa0849200:intron | 45.0% | |
| AAACATATCGGGAAGAAGGG+GGG | - | chr5_4:35666799-35666818 | None:intergenic | 45.0% | |
| CAAACATATCGGGAAGAAGG+GGG | - | chr5_4:35666800-35666819 | None:intergenic | 45.0% | |
| GCAAACATATCGGGAAGAAG+GGG | - | chr5_4:35666801-35666820 | None:intergenic | 45.0% | |
| GAGGAGTTTGGATAGTGTGT+AGG | + | chr5_4:35667165-35667184 | Msa0849200:intron | 45.0% | |
| CTTAGTTTACCCATGTCGAG+TGG | + | chr5_4:35667367-35667386 | Msa0849200:intron | 45.0% | |
| GACTAGAGCCTATAACAAGG+AGG | + | chr5_4:35667404-35667423 | Msa0849200:intron | 45.0% | |
| ! | CCTTAAGGCCTCCTTGTTAT+AGG | - | chr5_4:35667415-35667434 | None:intergenic | 45.0% |
| CCTATAACAAGGAGGCCTTA+AGG | + | chr5_4:35667412-35667431 | Msa0849200:intron | 45.0% | |
| ACAGTAAGGTTGCTGCCTTA+AGG | - | chr5_4:35667430-35667449 | None:intergenic | 45.0% | |
| ! | TGGCTAGTTAGTTTGGAAGG+AGG | + | chr5_4:35667593-35667612 | Msa0849200:intron | 45.0% |
| ATTAATCCTGGACTCCTTGG+AGG | + | chr5_4:35667865-35667884 | Msa0849200:intron | 45.0% | |
| !! | TCACTATAAGAGCACCCTAC+TGG | + | chr5_4:35667922-35667941 | Msa0849200:intron | 45.0% |
| TAGATAGGAGGGGAAGGAAA+GGG | - | chr5_4:35667999-35668018 | None:intergenic | 45.0% | |
| GGATCATGATTGGAGTGCAA+AGG | - | chr5_4:35668035-35668054 | None:intergenic | 45.0% | |
| ! | AAGGAGAAAAGTGTGCACAG+GGG | - | chr5_4:35668099-35668118 | None:intergenic | 45.0% |
| ! | GAAGGAGAAAAGTGTGCACA+GGG | - | chr5_4:35668100-35668119 | None:intergenic | 45.0% |
| ! | AGAAGGAGAAAAGTGTGCAC+AGG | - | chr5_4:35668101-35668120 | None:intergenic | 45.0% |
| CAAGTATTAGGAGGACAGCT+GGG | - | chr5_4:35668130-35668149 | None:intergenic | 45.0% | |
| TCAAGTATTAGGAGGACAGC+TGG | - | chr5_4:35668131-35668150 | None:intergenic | 45.0% | |
| GAAGACGCTCAAGTATTAGG+AGG | - | chr5_4:35668139-35668158 | None:intergenic | 45.0% | |
| !! | AGTGGCTCTGGAGAAAGAAA+TGG | - | chr5_4:35668238-35668257 | None:intergenic | 45.0% |
| GAAAACAGAGGCCATGGTAT+TGG | - | chr5_4:35668262-35668281 | None:intergenic | 45.0% | |
| ! | ACCATGGCCTCTGTTTTCTT+TGG | + | chr5_4:35668264-35668283 | Msa0849200:intron | 45.0% |
| ACCAAAGAAAACAGAGGCCA+TGG | - | chr5_4:35668268-35668287 | None:intergenic | 45.0% | |
| AACCGCAAGATTTGCGAGAA+GGG | - | chr5_4:35668337-35668356 | None:intergenic | 45.0% | |
| AAACCGCAAGATTTGCGAGA+AGG | - | chr5_4:35668338-35668357 | None:intergenic | 45.0% | |
| TTCTCGCAAATCTTGCGGTT+TGG | + | chr5_4:35668337-35668356 | Msa0849200:intron | 45.0% | |
| ! | TCTCTACAAGAGTCTAGCTC+TGG | - | chr5_4:35668455-35668474 | None:intergenic | 45.0% |
| ATATGGCAGGGAGTTTGAGA+GGG | - | chr5_4:35668580-35668599 | None:intergenic | 45.0% | |
| CGGAATTGAAACCATATGGC+AGG | - | chr5_4:35668593-35668612 | None:intergenic | 45.0% | |
| AACCTACCACATATTGGGCA+TGG | + | chr5_4:35668634-35668653 | Msa0849200:intron | 45.0% | |
| ACCTACCACATATTGGGCAT+GGG | + | chr5_4:35668635-35668654 | Msa0849200:intron | 45.0% | |
| CTTCCTTTGACTGACCCAAA+AGG | - | chr5_4:35668722-35668741 | None:intergenic | 45.0% | |
| AGAAGGGTTAGAGGACTGTA+AGG | + | chr5_4:35668751-35668770 | Msa0849200:intron | 45.0% | |
| GAAGGGTTAGAGGACTGTAA+GGG | + | chr5_4:35668752-35668771 | Msa0849200:intron | 45.0% | |
| AGTCAGCAGATTGGAAAGCA+GGG | - | chr5_4:35669070-35669089 | None:intergenic | 45.0% | |
| AAGTCAGCAGATTGGAAAGC+AGG | - | chr5_4:35669071-35669090 | None:intergenic | 45.0% | |
| ! | TGCTTTCCAATCTGCTGACT+TGG | + | chr5_4:35669070-35669089 | Msa0849200:intron | 45.0% |
| TCGCCTAAATTGCGACCTTT+GGG | + | chr5_4:35669177-35669196 | Msa0849200:intron | 45.0% | |
| GGTGTTAGAGGCTGTAATGA+AGG | - | chr5_4:35669207-35669226 | None:intergenic | 45.0% | |
| CCTCAAAGCCAACACAATGA+AGG | - | chr5_4:35669228-35669247 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr5_4:35669225-35669244 | Msa0849200:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr5_4:35669228-35669247 | Msa0849200:intron | 45.0% |
| TAGTCCCACATCGGATAGAT+AGG | + | chr5_4:35669257-35669276 | Msa0849200:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | - | chr5_4:35669264-35669283 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | - | chr5_4:35669265-35669284 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr5_4:35669321-35669340 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr5_4:35669318-35669337 | Msa0849200:intron | 45.0% |
| !!! | CTCGTTTTTTAGTCGGGCTT+GGG | - | chr5_4:35669574-35669593 | None:intergenic | 45.0% |
| CAAGCCCGACTAAAAAACGA+GGG | + | chr5_4:35669573-35669592 | Msa0849200:intron | 45.0% | |
| ACAGTATCACAATGAGGGGA+AGG | - | chr5_4:35669691-35669710 | None:intergenic | 45.0% | |
| !! | ACTGTTCTAAGGACCAGTTC+AGG | - | chr5_4:35669779-35669798 | None:intergenic | 45.0% |
| !! | CCTTCCAAGTATTGAGAGCT+TGG | - | chr5_4:35669923-35669942 | None:intergenic | 45.0% |
| CCAAGCTCTCAATACTTGGA+AGG | + | chr5_4:35669920-35669939 | Msa0849200:intron | 45.0% | |
| TGATGCCACGGTTCAAGATT+TGG | + | chr5_4:35670208-35670227 | Msa0849200:CDS | 45.0% | |
| CTCTTCCAAATCTTGAACCG+TGG | - | chr5_4:35670216-35670235 | None:intergenic | 45.0% | |
| CCATCCCTGATCCCTTTATT+GGG | + | chr5_4:35670431-35670450 | Msa0849200:intron | 45.0% | |
| TCACACACCAGCCCAATAAA+GGG | - | chr5_4:35670445-35670464 | None:intergenic | 45.0% | |
| ATCACACACCAGCCCAATAA+AGG | - | chr5_4:35670446-35670465 | None:intergenic | 45.0% | |
| ! | ACAATACACCAAATGGTGGG+AGG | - | chr5_4:35670627-35670646 | None:intergenic | 45.0% |
| GTAACTTGACCGTTCATAGG+TGG | + | chr5_4:35671221-35671240 | Msa0849200:three_prime_UTR | 45.0% | |
| GCCAAAGAAAGAAGGTGGAA+AGG | + | chr5_4:35671287-35671306 | Msa0849200:three_prime_UTR | 45.0% | |
| TGTGAGAGTGGTTTCTGTCT+TGG | - | chr5_4:35671319-35671338 | None:intergenic | 45.0% | |
| GCAAAACTAGCATGTGAGAG+TGG | - | chr5_4:35671331-35671350 | None:intergenic | 45.0% | |
| !! | ATTATTATTATTATCTTATA+CGG | + | chr5_4:35670162-35670181 | Msa0849200:intron | 5.0% |
| !!! | ATTATTTTATTTTATTTAAG+TGG | - | chr5_4:35671510-35671529 | None:intergenic | 5.0% |
| !! | ACTTAAATAAAATAAAATAA+TGG | + | chr5_4:35671509-35671528 | Msa0849200:three_prime_UTR | 5.0% |
| GTGAAAGCAAAGGAAGGAGG+AGG | + | chr5_4:35665689-35665708 | Msa0849200:five_prime_UTR | 50.0% | |
| ! | CTGCTAGTGGACAGTTGGAT+TGG | + | chr5_4:35666078-35666097 | Msa0849200:intron | 50.0% |
| !! | GGACAGTTGGATTGGTCTCT+CGG | + | chr5_4:35666086-35666105 | Msa0849200:intron | 50.0% |
| !! | GGATTAGTTGGTCTTTGGGC+CGG | + | chr5_4:35666107-35666126 | Msa0849200:intron | 50.0% |
| GACAGTGCCATCACACGTTT+AGG | + | chr5_4:35666289-35666308 | Msa0849200:intron | 50.0% | |
| AACATATCGGGAAGAAGGGG+GGG | - | chr5_4:35666798-35666817 | None:intergenic | 50.0% | |
| ACCCATGTCGAGTGGTTGTT+CGG | + | chr5_4:35667375-35667394 | Msa0849200:intron | 50.0% | |
| !! | TTGGAAGGAGGAGAGTACCT+AGG | + | chr5_4:35667605-35667624 | Msa0849200:intron | 50.0% |
| !! | AAGGAGGAGAGTACCTAGGA+AGG | + | chr5_4:35667609-35667628 | Msa0849200:intron | 50.0% |
| !! | AGGAGGAGAGTACCTAGGAA+GGG | + | chr5_4:35667610-35667629 | Msa0849200:intron | 50.0% |
| ! | GGGAAGGAAAGGGGAGTTTT+TGG | - | chr5_4:35667989-35668008 | None:intergenic | 50.0% |
| AGATAGGAGGGGAAGGAAAG+GGG | - | chr5_4:35667998-35668017 | None:intergenic | 50.0% | |
| GTAGATAGGAGGGGAAGGAA+AGG | - | chr5_4:35668000-35668019 | None:intergenic | 50.0% | |
| GGACAGCTGGGAGTAAAAGA+AGG | - | chr5_4:35668118-35668137 | None:intergenic | 50.0% | |
| !! | CATGGTATTGGTAGTGGCTC+TGG | - | chr5_4:35668250-35668269 | None:intergenic | 50.0% |
| CAGAGCCACTACCAATACCA+TGG | + | chr5_4:35668248-35668267 | Msa0849200:intron | 50.0% | |
| !! | AGAGGCCATGGTATTGGTAG+TGG | - | chr5_4:35668256-35668275 | None:intergenic | 50.0% |
| CACCCTTCTCGCAAATCTTG+CGG | + | chr5_4:35668332-35668351 | Msa0849200:intron | 50.0% | |
| !! | AAGAGTCTAGCTCTGGCAGT+AGG | - | chr5_4:35668448-35668467 | None:intergenic | 50.0% |
| ! | GGTGCTGAGAAGAGAGAGAA+AGG | - | chr5_4:35668523-35668542 | None:intergenic | 50.0% |
| TATGGCAGGGAGTTTGAGAG+GGG | - | chr5_4:35668579-35668598 | None:intergenic | 50.0% | |
| CATATGGCAGGGAGTTTGAG+AGG | - | chr5_4:35668581-35668600 | None:intergenic | 50.0% | |
| CTCTCAAACTCCCTGCCATA+TGG | + | chr5_4:35668579-35668598 | Msa0849200:intron | 50.0% | |
| AACAGCCCATGCCCAATATG+TGG | - | chr5_4:35668643-35668662 | None:intergenic | 50.0% | |
| !! | GCTGTTTCTCCCTGTTAGTG+TGG | + | chr5_4:35668657-35668676 | Msa0849200:intron | 50.0% |
| GAGAAGTTGGACAGAAGCAG+AGG | + | chr5_4:35668690-35668709 | Msa0849200:intron | 50.0% | |
| ! | GCAGAATCACTGGCTGGAAA+TGG | - | chr5_4:35669043-35669062 | None:intergenic | 50.0% |
| ! | GGTTTTGCAGAATCACTGGC+TGG | - | chr5_4:35669049-35669068 | None:intergenic | 50.0% |
| ! | GCAGGGTTTTGCAGAATCAC+TGG | - | chr5_4:35669053-35669072 | None:intergenic | 50.0% |
| GTCGCAATTTAGGCGACTAG+GGG | - | chr5_4:35669173-35669192 | None:intergenic | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | - | chr5_4:35669174-35669193 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | - | chr5_4:35669175-35669194 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | + | chr5_4:35669176-35669195 | Msa0849200:intron | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr5_4:35669248-35669267 | Msa0849200:intron | 50.0% |
| ACACTCCTCACCTTACAAGC+CGG | + | chr5_4:35669308-35669327 | Msa0849200:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr5_4:35669316-35669335 | None:intergenic | 50.0% |
| !!! | CCTCGTTTTTTAGTCGGGCT+TGG | - | chr5_4:35669575-35669594 | None:intergenic | 50.0% |
| CCAAGCCCGACTAAAAAACG+AGG | + | chr5_4:35669572-35669591 | Msa0849200:intron | 50.0% | |
| CAATGAGGGGAAGGACAACA+AGG | - | chr5_4:35669682-35669701 | None:intergenic | 50.0% | |
| GAGGCCTATCTAGTAGAGCT+AGG | - | chr5_4:35670347-35670366 | None:intergenic | 50.0% | |
| GCCATCCCTGATCCCTTTAT+TGG | + | chr5_4:35670430-35670449 | Msa0849200:intron | 50.0% | |
| CCCAATAAAGGGATCAGGGA+TGG | - | chr5_4:35670434-35670453 | None:intergenic | 50.0% | |
| CCAGCCCAATAAAGGGATCA+GGG | - | chr5_4:35670438-35670457 | None:intergenic | 50.0% | |
| ACCAGCCCAATAAAGGGATC+AGG | - | chr5_4:35670439-35670458 | None:intergenic | 50.0% | |
| ! | GTGCAGGAGCTTTGTAGACA+GGG | - | chr5_4:35670587-35670606 | None:intergenic | 50.0% |
| ! | TGTGCAGGAGCTTTGTAGAC+AGG | - | chr5_4:35670588-35670607 | None:intergenic | 50.0% |
| TGCACCAAAGCTCCCTCTTT+CGG | + | chr5_4:35670731-35670750 | Msa0849200:intron | 50.0% | |
| TAAGCCGAAAGAGGGAGCTT+TGG | - | chr5_4:35670738-35670757 | None:intergenic | 50.0% | |
| AAGATGCAATCTCTGCAGGC+TGG | + | chr5_4:35671157-35671176 | Msa0849200:CDS | 50.0% | |
| AGATGCAATCTCTGCAGGCT+GGG | + | chr5_4:35671158-35671177 | Msa0849200:CDS | 50.0% | |
| AATCTCTGCAGGCTGGGAAA+GGG | + | chr5_4:35671164-35671183 | Msa0849200:CDS | 50.0% | |
| ! | GGGTTCTGCTAGTGGACAGT+TGG | + | chr5_4:35666073-35666092 | Msa0849200:intron | 55.0% |
| GCCGAACAACCACTCGACAT+GGG | - | chr5_4:35667379-35667398 | None:intergenic | 55.0% | |
| AGCCGAACAACCACTCGACA+TGG | - | chr5_4:35667380-35667399 | None:intergenic | 55.0% | |
| CCATTTCCTCCAAGGAGTCC+AGG | - | chr5_4:35667874-35667893 | None:intergenic | 55.0% | |
| CCTGGACTCCTTGGAGGAAA+TGG | + | chr5_4:35667871-35667890 | Msa0849200:intron | 55.0% | |
| AGGTGGCAAGCAAGGATTGG+AGG | - | chr5_4:35668056-35668075 | None:intergenic | 55.0% | |
| GACAGGTGGCAAGCAAGGAT+TGG | - | chr5_4:35668059-35668078 | None:intergenic | 55.0% | |
| GAATGGACAGGTGGCAAGCA+AGG | - | chr5_4:35668064-35668083 | None:intergenic | 55.0% | |
| GCCCATGCCCAATATGTGGT+AGG | - | chr5_4:35668639-35668658 | None:intergenic | 55.0% | |
| CTAGGGGAGGACCGCAATTA+AGG | - | chr5_4:35669157-35669176 | None:intergenic | 55.0% | |
| GCAATTTAGGCGACTAGGGG+AGG | - | chr5_4:35669170-35669189 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr5_4:35669231-35669250 | Msa0849200:intron | 55.0% |
| GTTGGTTAACGTGGTGTGCC+TGG | - | chr5_4:35669653-35669672 | None:intergenic | 55.0% | |
| AGACCAAAGCAGGCCTGAAC+TGG | + | chr5_4:35669763-35669782 | Msa0849200:intron | 55.0% | |
| !! | CAGGAAGCGTCTTGATGCCA+CGG | + | chr5_4:35670196-35670215 | Msa0849200:intron | 55.0% |
| TGGGTCCTGTGCCTTGTCTA+GGG | + | chr5_4:35670397-35670416 | Msa0849200:intron | 55.0% | |
| GACTACCCTAGACAAGGCAC+AGG | - | chr5_4:35670405-35670424 | None:intergenic | 55.0% | |
| CCCTGATCCCTTTATTGGGC+TGG | + | chr5_4:35670435-35670454 | Msa0849200:intron | 55.0% | |
| CAATCTCTGCAGGCTGGGAA+AGG | + | chr5_4:35671163-35671182 | Msa0849200:CDS | 55.0% | |
| GAGGGGAGCAAACAGTGCAG+AGG | - | chr5_4:35668562-35668581 | None:intergenic | 60.0% | |
| GGGGAGGACCGCAATTAAGG+CGG | - | chr5_4:35669154-35669173 | None:intergenic | 60.0% | |
| GGACCAGTTCAGGCCTGCTT+TGG | - | chr5_4:35669769-35669788 | None:intergenic | 60.0% | |
| GTGGGTCCTGTGCCTTGTCT+AGG | + | chr5_4:35670396-35670415 | Msa0849200:intron | 60.0% | |
| GCTCCTGCACACGCAATGTC+CGG | + | chr5_4:35670597-35670616 | Msa0849200:intron | 60.0% | |
| CTCCTGCACACGCAATGTCC+GGG | + | chr5_4:35670598-35670617 | Msa0849200:intron | 60.0% | |
| ! | CCAAATGGTGGGAGGTCTCC+CGG | - | chr5_4:35670619-35670638 | None:intergenic | 60.0% |
| TCTGCAGGCTGGGAAAGGGA+AGG | + | chr5_4:35671168-35671187 | Msa0849200:CDS | 60.0% | |
| CTCCCGGACATTGCGTGTGC+AGG | - | chr5_4:35670603-35670622 | None:intergenic | 65.0% | |
| CCGGGAGACCTCCCACCATT+TGG | + | chr5_4:35670616-35670635 | Msa0849200:intron | 65.0% | |
| !! | GGGAAGAAGGGGGGGCATCC+TGG | - | chr5_4:35666790-35666809 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 35665653 | 35671534 | 35665653 | ID=Msa0849200;Name=Msa0849200 |
| chr5_4 | mRNA | 35665653 | 35671534 | 35665653 | ID=Msa0849200-mRNA-1;Parent=Msa0849200;Name=Msa0849200-mRNA-1;_AED=0.05;_eAED=0.05;_QI=73|1|1|1|0.5|0.8|5|339|129 |
| chr5_4 | exon | 35665653 | 35665801 | 35665653 | ID=Msa0849200-mRNA-1:exon:11884;Parent=Msa0849200-mRNA-1 |
| chr5_4 | exon | 35665895 | 35665965 | 35665895 | ID=Msa0849200-mRNA-1:exon:11885;Parent=Msa0849200-mRNA-1 |
| chr5_4 | exon | 35666388 | 35666512 | 35666388 | ID=Msa0849200-mRNA-1:exon:11886;Parent=Msa0849200-mRNA-1 |
| chr5_4 | exon | 35670199 | 35670259 | 35670199 | ID=Msa0849200-mRNA-1:exon:11887;Parent=Msa0849200-mRNA-1 |
| chr5_4 | exon | 35671139 | 35671534 | 35671139 | ID=Msa0849200-mRNA-1:exon:11888;Parent=Msa0849200-mRNA-1 |
| chr5_4 | five_prime_UTR | 35665653 | 35665725 | 35665653 | ID=Msa0849200-mRNA-1:five_prime_utr;Parent=Msa0849200-mRNA-1 |
| chr5_4 | CDS | 35665726 | 35665801 | 35665726 | ID=Msa0849200-mRNA-1:cds;Parent=Msa0849200-mRNA-1 |
| chr5_4 | CDS | 35665895 | 35665965 | 35665895 | ID=Msa0849200-mRNA-1:cds;Parent=Msa0849200-mRNA-1 |
| chr5_4 | CDS | 35666388 | 35666512 | 35666388 | ID=Msa0849200-mRNA-1:cds;Parent=Msa0849200-mRNA-1 |
| chr5_4 | CDS | 35670199 | 35670259 | 35670199 | ID=Msa0849200-mRNA-1:cds;Parent=Msa0849200-mRNA-1 |
| chr5_4 | CDS | 35671139 | 35671195 | 35671139 | ID=Msa0849200-mRNA-1:cds;Parent=Msa0849200-mRNA-1 |
| chr5_4 | three_prime_UTR | 35671196 | 35671534 | 35671196 | ID=Msa0849200-mRNA-1:three_prime_utr;Parent=Msa0849200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
