Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783690 | G7K793 | 97.395 | 499 | 9 | 2 | 1 | 498 | 1 | 496 | 0.0 | 999 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023330 | Msa0783690 | 0.818210 | 2.207998e-52 | -8.615850e-47 |
| Msa0031180 | Msa0783690 | 0.803492 | 3.397714e-49 | -8.615850e-47 |
| Msa0032470 | Msa0783690 | 0.806530 | 7.866371e-50 | -8.615850e-47 |
| Msa0036140 | Msa0783690 | 0.801259 | 9.794668e-49 | -8.615850e-47 |
| Msa0043980 | Msa0783690 | 0.821790 | 3.348364e-53 | -8.615850e-47 |
| Msa0078480 | Msa0783690 | 0.802080 | 6.648928e-49 | -8.615850e-47 |
| Msa0083280 | Msa0783690 | 0.800671 | 1.291658e-48 | -8.615850e-47 |
| Msa0086420 | Msa0783690 | 0.814832 | 1.260219e-51 | -8.615850e-47 |
| Msa0104230 | Msa0783690 | 0.815838 | 7.530196e-52 | -8.615850e-47 |
| Msa0613120 | Msa0783690 | 0.811966 | 5.374939e-51 | -8.615850e-47 |
| Msa0621600 | Msa0783690 | 0.804484 | 2.112835e-49 | -8.615850e-47 |
| Msa0622170 | Msa0783690 | -0.802475 | 5.511977e-49 | -8.615850e-47 |
| Msa0623990 | Msa0783690 | 0.800884 | 1.168858e-48 | -8.615850e-47 |
| Msa0624060 | Msa0783690 | 0.822615 | 2.154524e-53 | -8.615850e-47 |
| Msa0637900 | Msa0783690 | 0.801023 | 1.094626e-48 | -8.615850e-47 |
| Msa0642730 | Msa0783690 | 0.801866 | 7.354823e-49 | -8.615850e-47 |
| Msa0653660 | Msa0783690 | 0.808261 | 3.377521e-50 | -8.615850e-47 |
| Msa0676130 | Msa0783690 | 0.820198 | 7.783467e-53 | -8.615850e-47 |
| Msa0676180 | Msa0783690 | 0.822740 | 2.015268e-53 | -8.615850e-47 |
| Msa0680660 | Msa0783690 | 0.809173 | 2.156434e-50 | -8.615850e-47 |
| Msa0696080 | Msa0783690 | 0.806530 | 7.866759e-50 | -8.615850e-47 |
| Msa0703780 | Msa0783690 | 0.806056 | 9.899382e-50 | -8.615850e-47 |
| Msa0704920 | Msa0783690 | 0.811749 | 5.991988e-51 | -8.615850e-47 |
| Msa0711100 | Msa0783690 | 0.802573 | 5.262073e-49 | -8.615850e-47 |
| Msa0721280 | Msa0783690 | 0.809746 | 1.624825e-50 | -8.615850e-47 |
| Msa0731180 | Msa0783690 | 0.802351 | 5.847212e-49 | -8.615850e-47 |
| Msa0738030 | Msa0783690 | 0.816291 | 5.965815e-52 | -8.615850e-47 |
| Msa0750850 | Msa0783690 | 0.805030 | 1.625111e-49 | -8.615850e-47 |
| Msa0751850 | Msa0783690 | 0.801823 | 7.505593e-49 | -8.615850e-47 |
| Msa0763890 | Msa0783690 | 0.824745 | 6.834433e-54 | -8.615850e-47 |
| Msa0763920 | Msa0783690 | 0.816404 | 5.628190e-52 | -8.615850e-47 |
| Msa0783690 | Msa0785220 | 0.803940 | 2.741936e-49 | -8.615850e-47 |
| Msa0783690 | Msa0797770 | 0.809766 | 1.608713e-50 | -8.615850e-47 |
| Msa0783690 | Msa0817460 | 0.843543 | 1.313507e-58 | -8.615850e-47 |
| Msa0783690 | Msa0818890 | 0.850739 | 1.397805e-60 | -8.615850e-47 |
| Msa0783690 | Msa0831850 | 0.826701 | 2.347344e-54 | -8.615850e-47 |
| Msa0783690 | Msa0832150 | 0.820273 | 7.482453e-53 | -8.615850e-47 |
| Msa0783690 | Msa0835230 | 0.814598 | 1.419986e-51 | -8.615850e-47 |
| Msa0783690 | Msa0844110 | 0.802169 | 6.371920e-49 | -8.615850e-47 |
| Msa0783690 | Msa0844320 | 0.808917 | 2.446389e-50 | -8.615850e-47 |
| Msa0783690 | Msa0859070 | 0.851054 | 1.139418e-60 | -8.615850e-47 |
| Msa0783690 | Msa0994370 | 0.804271 | 2.340396e-49 | -8.615850e-47 |
| Msa0783690 | Msa1036610 | 0.805245 | 1.464881e-49 | -8.615850e-47 |
| Msa0783690 | Msa1039710 | -0.810095 | 1.366954e-50 | -8.615850e-47 |
| Msa0783690 | Msa1063420 | 0.806918 | 6.514238e-50 | -8.615850e-47 |
| Msa0783690 | Msa1080270 | 0.804054 | 2.596391e-49 | -8.615850e-47 |
| Msa0783690 | Msa1089460 | 0.820784 | 5.710727e-53 | -8.615850e-47 |
| Msa0783690 | Msa1100130 | -0.808146 | 3.574327e-50 | -8.615850e-47 |
| Msa0783690 | Msa1122150 | 0.811073 | 8.401338e-51 | -8.615850e-47 |
| Msa0783690 | Msa1204530 | 0.825641 | 4.196845e-54 | -8.615850e-47 |
| Msa0783690 | Msa1204630 | 0.832386 | 9.738988e-56 | -8.615850e-47 |
| Msa0783690 | Msa1207310 | 0.815586 | 8.570254e-52 | -8.615850e-47 |
| Msa0783690 | Msa1270660 | 0.836966 | 6.861907e-57 | -8.615850e-47 |
| Msa0783690 | Msa1270730 | 0.832300 | 1.022672e-55 | -8.615850e-47 |
| Msa0783690 | Msa1295930 | 0.800505 | 1.396539e-48 | -8.615850e-47 |
| Msa0783690 | Msa1325860 | -0.801272 | 9.736034e-49 | -8.615850e-47 |
| Msa0783690 | Msa1331000 | 0.823728 | 1.184568e-53 | -8.615850e-47 |
| Msa0783690 | Msa1331320 | 0.821442 | 4.028205e-53 | -8.615850e-47 |
| Msa0783690 | Msa1335230 | 0.819459 | 1.148803e-52 | -8.615850e-47 |
| Msa0783690 | Msa1357890 | 0.809629 | 1.722021e-50 | -8.615850e-47 |
| Msa0783690 | Msa1372150 | 0.813318 | 2.720213e-51 | -8.615850e-47 |
| Msa0783690 | Msa1376130 | 0.811846 | 5.707006e-51 | -8.615850e-47 |
| Msa0783690 | Msa1377570 | 0.816699 | 4.833705e-52 | -8.615850e-47 |
| Msa0783690 | Msa1378410 | 0.822835 | 1.914977e-53 | -8.615850e-47 |
| Msa0783690 | Msa1397120 | 0.849594 | 2.926308e-60 | -8.615850e-47 |
| Msa0783690 | Msa1398090 | 0.803982 | 2.687304e-49 | -8.615850e-47 |
| Msa0783690 | Msa1400930 | 0.808507 | 2.994148e-50 | -8.615850e-47 |
| Msa0783690 | Msa1401460 | 0.805745 | 1.150605e-49 | -8.615850e-47 |
| Msa0783690 | Msa1403890 | 0.850325 | 1.826914e-60 | -8.615850e-47 |
| Msa0783690 | Msa1423820 | 0.813830 | 2.098058e-51 | -8.615850e-47 |
| Msa0783690 | Msa1425260 | 0.808761 | 2.642684e-50 | -8.615850e-47 |
| Msa0783690 | Msa1428780 | 0.822379 | 2.445128e-53 | -8.615850e-47 |
| Msa0783690 | Msa1460050 | 0.802540 | 5.346111e-49 | -8.615850e-47 |
| Msa0783690 | Msa1466540 | 0.806923 | 6.496841e-50 | -8.615850e-47 |
| Msa0138020 | Msa0783690 | 0.820968 | 5.180844e-53 | -8.615850e-47 |
| Msa0160960 | Msa0783690 | 0.808786 | 2.609355e-50 | -8.615850e-47 |
| Msa0174390 | Msa0783690 | 0.807185 | 5.718539e-50 | -8.615850e-47 |
| Msa0178510 | Msa0783690 | 0.812946 | 3.282111e-51 | -8.615850e-47 |
| Msa0186950 | Msa0783690 | 0.818348 | 2.053884e-52 | -8.615850e-47 |
| Msa0202800 | Msa0783690 | 0.802964 | 4.368480e-49 | -8.615850e-47 |
| Msa0206010 | Msa0783690 | 0.812779 | 3.570807e-51 | -8.615850e-47 |
| Msa0233370 | Msa0783690 | 0.811936 | 5.455571e-51 | -8.615850e-47 |
| Msa0376910 | Msa0783690 | 0.851569 | 8.150032e-61 | -8.615850e-47 |
| Msa0392270 | Msa0783690 | 0.810579 | 1.074352e-50 | -8.615850e-47 |
| Msa0412840 | Msa0783690 | 0.813909 | 2.016278e-51 | -8.615850e-47 |
| Msa0426900 | Msa0783690 | 0.803200 | 3.905421e-49 | -8.615850e-47 |
| Msa0433410 | Msa0783690 | -0.803140 | 4.018759e-49 | -8.615850e-47 |
| Msa0464100 | Msa0783690 | 0.815557 | 8.697890e-52 | -8.615850e-47 |
| Msa0464120 | Msa0783690 | 0.815404 | 9.406696e-52 | -8.615850e-47 |
| Msa0471900 | Msa0783690 | 0.856089 | 4.072029e-62 | -8.615850e-47 |
| Msa0241140 | Msa0783690 | 0.811060 | 8.454919e-51 | -8.615850e-47 |
| Msa0265150 | Msa0783690 | 0.805653 | 1.203250e-49 | -8.615850e-47 |
| Msa0278580 | Msa0783690 | 0.822886 | 1.863766e-53 | -8.615850e-47 |
| Msa0286670 | Msa0783690 | 0.824071 | 9.845093e-54 | -8.615850e-47 |
| Msa0311720 | Msa0783690 | 0.806087 | 9.753733e-50 | -8.615850e-47 |
| Msa0317960 | Msa0783690 | 0.810146 | 1.332465e-50 | -8.615850e-47 |
| Msa0326110 | Msa0783690 | 0.814182 | 1.755262e-51 | -8.615850e-47 |
| Msa0336310 | Msa0783690 | 0.800538 | 1.375090e-48 | -8.615850e-47 |
| Msa0363790 | Msa0783690 | 0.806299 | 8.801396e-50 | -8.615850e-47 |
| Msa0485490 | Msa0783690 | 0.809226 | 2.101430e-50 | -8.615850e-47 |
| Msa0518380 | Msa0783690 | 0.811166 | 8.019429e-51 | -8.615850e-47 |
| Msa0558370 | Msa0783690 | 0.816429 | 5.555494e-52 | -8.615850e-47 |
| Msa0566350 | Msa0783690 | 0.807472 | 4.971058e-50 | -8.615850e-47 |
| Msa0566750 | Msa0783690 | 0.809246 | 2.080667e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783690 | MtrunA17_Chr5g0437761 | 97.395 | 499 | 9 | 2 | 1 | 498 | 1 | 496 | 0.0 | 999 |
| Msa0783690 | MtrunA17_Chr3g0114221 | 69.495 | 495 | 139 | 7 | 8 | 497 | 7 | 494 | 0.0 | 696 |
| Msa0783690 | MtrunA17_Chr1g0207751 | 28.413 | 542 | 317 | 18 | 3 | 495 | 32 | 551 | 8.17e-50 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783690 | AT2G40390.1 | 56.461 | 503 | 207 | 5 | 1 | 498 | 1 | 496 | 0.0 | 585 |
| Msa0783690 | AT5G64190.1 | 53.507 | 499 | 219 | 8 | 8 | 497 | 7 | 501 | 0.0 | 520 |
| Msa0783690 | AT5G64190.2 | 53.507 | 499 | 219 | 8 | 8 | 497 | 8 | 502 | 0.0 | 520 |
| Msa0783690 | AT2G15020.1 | 25.830 | 542 | 327 | 14 | 7 | 495 | 1 | 520 | 1.15e-51 | 184 |
Find 87 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATGCCTATTTCCATTAT+TGG | 0.166320 | 5_2:-67842645 | None:intergenic |
| AACTAGGAGGTTGGAGTTTA+GGG | 0.189509 | 5_2:+67843082 | Msa0783690:CDS |
| AAATTTGAAGAATCGGTTTA+TGG | 0.202767 | 5_2:+67842762 | Msa0783690:CDS |
| TTTGGAATAGTTTCAAGTTT+TGG | 0.229221 | 5_2:-67841078 | None:intergenic |
| ATACAAGACATTCTTAATTA+TGG | 0.230218 | 5_2:+67841018 | Msa0783690:CDS |
| AAACTAGGAGGTTGGAGTTT+AGG | 0.246270 | 5_2:+67843081 | Msa0783690:CDS |
| GTATTGTCCTCTTATAAATA+TGG | 0.256126 | 5_2:+67841422 | Msa0783690:CDS |
| TTAACCTTGCTATTACAAAT+TGG | 0.271133 | 5_2:+67841295 | Msa0783690:CDS |
| AGATTATGGAATGGGAAATA+AGG | 0.290319 | 5_2:+67843006 | Msa0783690:CDS |
| TTGAAAATGTCACTAAAGTT+TGG | 0.294909 | 5_2:-67841096 | None:intergenic |
| ACCCCACCTTGTCTAGTAAA+AGG | 0.303601 | 5_2:-67842918 | None:intergenic |
| GAAAATCCAATAATGGAAAT+AGG | 0.304600 | 5_2:+67842639 | Msa0783690:CDS |
| GGGAAATAAGGGGTTGGATA+TGG | 0.306883 | 5_2:+67843018 | Msa0783690:CDS |
| GCTCCTTCGGATCTTCGTTA+TGG | 0.315156 | 5_2:+67841162 | Msa0783690:CDS |
| CTAAGTCTTGGTTTAGAGAT+AGG | 0.319369 | 5_2:+67842877 | Msa0783690:CDS |
| GACCCACTTCTCCTTGATAA+AGG | 0.322270 | 5_2:-67841541 | None:intergenic |
| CTCCTTCGGATCTTCGTTAT+GGG | 0.338482 | 5_2:+67841163 | Msa0783690:CDS |
| CAGCTCCTCTTTCATTCATA+AGG | 0.338915 | 5_2:-67842521 | None:intergenic |
| TTAATTAATTCAAATTTAGA+AGG | 0.340981 | 5_2:-67842852 | None:intergenic |
| AAGTGCTAGAGGGAAGATTA+TGG | 0.342959 | 5_2:+67842992 | Msa0783690:CDS |
| TAGAATGTCCTATACTTATT+AGG | 0.345792 | 5_2:-67843053 | None:intergenic |
| GTTATAGTGCAAATTTGAAT+TGG | 0.366425 | 5_2:+67842784 | Msa0783690:CDS |
| CTTATTTGCCTAATAAGTAT+AGG | 0.370748 | 5_2:+67843045 | Msa0783690:CDS |
| ATCTTCAGAAAATCCAATAA+TGG | 0.374501 | 5_2:+67842632 | Msa0783690:CDS |
| GCAATAAAGGAACAATTATC+AGG | 0.375094 | 5_2:+67841195 | Msa0783690:CDS |
| TCTCCTTGATAAAGGCTTTG+TGG | 0.379047 | 5_2:-67841533 | None:intergenic |
| AAGTTGTTGATGAAACTATT+AGG | 0.380051 | 5_2:+67841240 | Msa0783690:CDS |
| CTCAAATATCAACAACTTGA+AGG | 0.385045 | 5_2:+67841495 | Msa0783690:CDS |
| TTGGTTTCTTCATGATAGTA+TGG | 0.390260 | 5_2:+67842803 | Msa0783690:CDS |
| ATTAACAAGGAGATTTGAAA+TGG | 0.400275 | 5_2:-67840992 | None:intergenic |
| GCCTTGGAAATTTGAAGAAT+CGG | 0.401479 | 5_2:+67842755 | Msa0783690:CDS |
| GAAAATGCGTAAGAAAATAA+AGG | 0.408273 | 5_2:-67841372 | None:intergenic |
| ACTCCAACCTCCTAGTTTCA+TGG | 0.411113 | 5_2:-67843076 | None:intergenic |
| CAACAATGAGTTTAAAGCCT+TGG | 0.411370 | 5_2:+67842739 | Msa0783690:CDS |
| TAGCAATGAACATAAGCTTA+AGG | 0.412410 | 5_2:-67840818 | None:intergenic |
| AGTCCTATGTAGGGATTTGT+TGG | 0.419672 | 5_2:-67842693 | None:intergenic |
| GATTATGGAATGGGAAATAA+GGG | 0.429389 | 5_2:+67843007 | Msa0783690:CDS |
| CCAATATCCGAATGGAAAAC+AGG | 0.429810 | 5_2:+67840787 | Msa0783690:CDS |
| GTTCTAATTTAGAAGAAAAG+TGG | 0.431200 | 5_2:+67841262 | Msa0783690:CDS |
| TTGTATTTATGAAGCTCCTT+CGG | 0.431733 | 5_2:+67841149 | Msa0783690:CDS |
| AGCTCCTCTTTCATTCATAA+GGG | 0.447164 | 5_2:-67842520 | None:intergenic |
| TGGTGAACATTGACAACATA+AGG | 0.454093 | 5_2:+67841571 | Msa0783690:CDS |
| CTATCTCTAAACCAAGACTT+AGG | 0.456609 | 5_2:-67842876 | None:intergenic |
| ACAACATCCATATTTATAAG+AGG | 0.464944 | 5_2:-67841429 | None:intergenic |
| AATTAATTAACCCTAAGTCT+TGG | 0.472762 | 5_2:+67842865 | Msa0783690:CDS |
| TAGAGGGAAGATTATGGAAT+GGG | 0.487526 | 5_2:+67842998 | Msa0783690:CDS |
| TGCTATTACAAATTGGATTG+TGG | 0.497116 | 5_2:+67841302 | Msa0783690:CDS |
| GGAGAAGTGGGTCGAAATCA+TGG | 0.504586 | 5_2:+67841551 | Msa0783690:CDS |
| TGGGTGTCTTAGTGCAATAA+AGG | 0.508493 | 5_2:+67841182 | Msa0783690:CDS |
| CAACCACAAAGCCTTTATCA+AGG | 0.513836 | 5_2:+67841530 | Msa0783690:CDS |
| TGATACGTTGAGTCCTATGT+AGG | 0.515538 | 5_2:-67842703 | None:intergenic |
| ACCGATTCTTCAAATTTCCA+AGG | 0.517511 | 5_2:-67842756 | None:intergenic |
| TTTCTTCATGATAGTATGGA+TGG | 0.518404 | 5_2:+67842807 | Msa0783690:CDS |
| AGGCTTTAAACTCATTGTTG+TGG | 0.521841 | 5_2:-67842736 | None:intergenic |
| CAAGTATTAAGTGTATCGGT+TGG | 0.527119 | 5_2:+67842606 | Msa0783690:CDS |
| AGTTGCAATGATATTCTTGA+TGG | 0.528882 | 5_2:-67842564 | None:intergenic |
| TCCAATAATGGAAATAGGCA+TGG | 0.529685 | 5_2:+67842644 | Msa0783690:CDS |
| ATCTCAATATTCCTTAGCTT+AGG | 0.533809 | 5_2:+67843114 | Msa0783690:exon |
| GACACCCTTATGAATGAAAG+AGG | 0.534438 | 5_2:+67842516 | Msa0783690:CDS |
| ATACACTTAATACTTGATGT+TGG | 0.534811 | 5_2:-67842599 | None:intergenic |
| TATCTCTAAACCAAGACTTA+GGG | 0.543035 | 5_2:-67842875 | None:intergenic |
| ATAGGACTCAACGTATCAGC+TGG | 0.543608 | 5_2:+67842708 | Msa0783690:CDS |
| CTTATGAATGAAAGAGGAGC+TGG | 0.553722 | 5_2:+67842522 | Msa0783690:CDS |
| AATACTTGATGTTGGAGTGT+TGG | 0.554791 | 5_2:-67842591 | None:intergenic |
| TCTGCGTTATTCCTAAGCTA+AGG | 0.561078 | 5_2:-67843125 | None:intergenic |
| CTACCATGAAACTAGGAGGT+TGG | 0.561866 | 5_2:+67843073 | Msa0783690:CDS |
| CAATCCAATTTGTAATAGCA+AGG | 0.565470 | 5_2:-67841299 | None:intergenic |
| AAGCCTTTATCAAGGAGAAG+TGG | 0.567695 | 5_2:+67841538 | Msa0783690:CDS |
| GCGTAAGAAAATAAAGGAGA+TGG | 0.568240 | 5_2:-67841366 | None:intergenic |
| GGACATTCTACCATGAAACT+AGG | 0.571006 | 5_2:+67843066 | Msa0783690:CDS |
| CAACCAACAAATCCCTACAT+AGG | 0.576027 | 5_2:+67842690 | Msa0783690:CDS |
| AAAGTTGATAAAAGTGCTAG+AGG | 0.576839 | 5_2:+67842981 | Msa0783690:CDS |
| TGGAATGGGAAATAAGGGGT+TGG | 0.577065 | 5_2:+67843012 | Msa0783690:CDS |
| ACATCAAGTATTAAGTGTAT+CGG | 0.584483 | 5_2:+67842602 | Msa0783690:CDS |
| CTAGAGGGAAGATTATGGAA+TGG | 0.593772 | 5_2:+67842997 | Msa0783690:CDS |
| TAAGCTAAGGAATATTGAGA+TGG | 0.598868 | 5_2:-67843112 | None:intergenic |
| ATCTTCCACCAATATCCGAA+TGG | 0.602427 | 5_2:+67840779 | Msa0783690:CDS |
| AGCCTTTATCAAGGAGAAGT+GGG | 0.606851 | 5_2:+67841539 | Msa0783690:CDS |
| GATACGTTGAGTCCTATGTA+GGG | 0.607861 | 5_2:-67842702 | None:intergenic |
| AAGTTGATAAAAGTGCTAGA+GGG | 0.617052 | 5_2:+67842982 | Msa0783690:CDS |
| GTTGCAATGATATTCTTGAT+GGG | 0.617241 | 5_2:-67842563 | None:intergenic |
| CACCCATAACGAAGATCCGA+AGG | 0.619176 | 5_2:-67841165 | None:intergenic |
| AATATGGAGAAAGTGTGTGT+TGG | 0.621471 | 5_2:+67842958 | Msa0783690:CDS |
| CATTCTACCATGAAACTAGG+AGG | 0.670138 | 5_2:+67843069 | Msa0783690:CDS |
| GATATGGTGAGATTAAGTGA+TGG | 0.688165 | 5_2:-67840853 | None:intergenic |
| TGTCTTGTATGAAATTAACA+AGG | 0.688991 | 5_2:-67841005 | None:intergenic |
| ATTATGGAATGGGAAATAAG+GGG | 0.708077 | 5_2:+67843008 | Msa0783690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAAAAACCTTTT+AGG | - | chr5_2:67841677-67841696 | None:intergenic | 10.0% |
| !! | ATTGAATATTTAAATTTCTT+TGG | + | chr5_2:67842464-67842483 | Msa0783690:intron | 10.0% |
| !! | TTAATTAATTCAAATTTAGA+AGG | - | chr5_2:67842855-67842874 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAACCTTTT+AGG | - | chr5_2:67841677-67841696 | None:intergenic | 10.0% |
| !! | ATTGAATATTTAAATTTCTT+TGG | + | chr5_2:67842464-67842483 | Msa0783690:intron | 10.0% |
| !! | TTAATTAATTCAAATTTAGA+AGG | - | chr5_2:67842855-67842874 | None:intergenic | 10.0% |
| !! | AATTTAATTCTATCTTGAAA+AGG | - | chr5_2:67841640-67841659 | None:intergenic | 15.0% |
| !! | AGTAATTAATTGTTAGTATT+AGG | - | chr5_2:67841795-67841814 | None:intergenic | 15.0% |
| !! | ATAAACTTGAAAATATCATA+TGG | + | chr5_2:67842018-67842037 | Msa0783690:intron | 15.0% |
| !! | TAAACTTGAAAATATCATAT+GGG | + | chr5_2:67842019-67842038 | Msa0783690:intron | 15.0% |
| !!! | AGAATTTTTATTTGTAGAAA+GGG | - | chr5_2:67842348-67842367 | None:intergenic | 15.0% |
| !!! | AAGAATTTTTATTTGTAGAA+AGG | - | chr5_2:67842349-67842368 | None:intergenic | 15.0% |
| !! | AATTTAATTCTATCTTGAAA+AGG | - | chr5_2:67841640-67841659 | None:intergenic | 15.0% |
| !! | AGTAATTAATTGTTAGTATT+AGG | - | chr5_2:67841795-67841814 | None:intergenic | 15.0% |
| !! | ATAAACTTGAAAATATCATA+TGG | + | chr5_2:67842018-67842037 | Msa0783690:intron | 15.0% |
| !! | TAAACTTGAAAATATCATAT+GGG | + | chr5_2:67842019-67842038 | Msa0783690:intron | 15.0% |
| !!! | AGAATTTTTATTTGTAGAAA+GGG | - | chr5_2:67842348-67842367 | None:intergenic | 15.0% |
| !!! | AAGAATTTTTATTTGTAGAA+AGG | - | chr5_2:67842349-67842368 | None:intergenic | 15.0% |
| !!! | ATAATATCCCTATTTTTCTT+TGG | + | chr5_2:67840923-67840942 | Msa0783690:CDS | 20.0% |
| !! | ATACAAGACATTCTTAATTA+TGG | + | chr5_2:67841018-67841037 | Msa0783690:CDS | 20.0% |
| !! | ATAAGAGAGTTAAAAAAGAA+AGG | - | chr5_2:67841122-67841141 | None:intergenic | 20.0% |
| !!! | TTTTTTAACTCTCTTATTCT+TGG | + | chr5_2:67841125-67841144 | Msa0783690:CDS | 20.0% |
| !!! | AAATGTTTTATATGTAGAGA+CGG | - | chr5_2:67841822-67841841 | None:intergenic | 20.0% |
| !!! | CTCTACATATAAAACATTTT+TGG | + | chr5_2:67841823-67841842 | Msa0783690:intron | 20.0% |
| !!! | CTTTCTTAATTTTCATGATT+TGG | - | chr5_2:67841849-67841868 | None:intergenic | 20.0% |
| !! | ATCATGAAAATTAAGAAAGT+TGG | + | chr5_2:67841850-67841869 | Msa0783690:intron | 20.0% |
| !!! | CTCTTTTTTAAAGGATAAAA+TGG | - | chr5_2:67841915-67841934 | None:intergenic | 20.0% |
| !!! | AAACTAACTCTCTTTTTTAA+AGG | - | chr5_2:67841924-67841943 | None:intergenic | 20.0% |
| !!! | TCGAAAGGATTTTATAATTA+GGG | + | chr5_2:67842069-67842088 | Msa0783690:intron | 20.0% |
| !!! | ATATTTGTTTAGTTTTAGAG+TGG | + | chr5_2:67842263-67842282 | Msa0783690:intron | 20.0% |
| !!! | TATTTGTTTAGTTTTAGAGT+GGG | + | chr5_2:67842264-67842283 | Msa0783690:intron | 20.0% |
| !! | CTACAAATAAAAATTCTTTG+CGG | + | chr5_2:67842351-67842370 | Msa0783690:intron | 20.0% |
| !!! | ATAATATCCCTATTTTTCTT+TGG | + | chr5_2:67840923-67840942 | Msa0783690:CDS | 20.0% |
| !! | ATACAAGACATTCTTAATTA+TGG | + | chr5_2:67841018-67841037 | Msa0783690:CDS | 20.0% |
| !! | ATAAGAGAGTTAAAAAAGAA+AGG | - | chr5_2:67841122-67841141 | None:intergenic | 20.0% |
| !!! | TTTTTTAACTCTCTTATTCT+TGG | + | chr5_2:67841125-67841144 | Msa0783690:CDS | 20.0% |
| !!! | AAATGTTTTATATGTAGAGA+CGG | - | chr5_2:67841822-67841841 | None:intergenic | 20.0% |
| !!! | CTCTACATATAAAACATTTT+TGG | + | chr5_2:67841823-67841842 | Msa0783690:intron | 20.0% |
| !!! | CTTTCTTAATTTTCATGATT+TGG | - | chr5_2:67841849-67841868 | None:intergenic | 20.0% |
| !! | ATCATGAAAATTAAGAAAGT+TGG | + | chr5_2:67841850-67841869 | Msa0783690:intron | 20.0% |
| !!! | CTCTTTTTTAAAGGATAAAA+TGG | - | chr5_2:67841915-67841934 | None:intergenic | 20.0% |
| !!! | AAACTAACTCTCTTTTTTAA+AGG | - | chr5_2:67841924-67841943 | None:intergenic | 20.0% |
| !!! | TCGAAAGGATTTTATAATTA+GGG | + | chr5_2:67842069-67842088 | Msa0783690:intron | 20.0% |
| !!! | ATATTTGTTTAGTTTTAGAG+TGG | + | chr5_2:67842263-67842282 | Msa0783690:intron | 20.0% |
| !!! | TATTTGTTTAGTTTTAGAGT+GGG | + | chr5_2:67842264-67842283 | Msa0783690:intron | 20.0% |
| !! | CTACAAATAAAAATTCTTTG+CGG | + | chr5_2:67842351-67842370 | Msa0783690:intron | 20.0% |
| !! | ATTTTATTGCTAGGTTTGAA+TGG | - | chr5_2:67840958-67840977 | None:intergenic | 25.0% |
| !! | TCATGTGATATTTTATTGCT+AGG | - | chr5_2:67840967-67840986 | None:intergenic | 25.0% |
| ! | ATTAACAAGGAGATTTGAAA+TGG | - | chr5_2:67840995-67841014 | None:intergenic | 25.0% |
| ! | TGTCTTGTATGAAATTAACA+AGG | - | chr5_2:67841008-67841027 | None:intergenic | 25.0% |
| !!! | GTTTTGGAAATTTAATGAAG+AGG | - | chr5_2:67841065-67841084 | None:intergenic | 25.0% |
| !!! | TTTGGAATAGTTTCAAGTTT+TGG | - | chr5_2:67841081-67841100 | None:intergenic | 25.0% |
| ! | TTGAAAATGTCACTAAAGTT+TGG | - | chr5_2:67841099-67841118 | None:intergenic | 25.0% |
| !! | AAGTTGTTGATGAAACTATT+AGG | + | chr5_2:67841240-67841259 | Msa0783690:CDS | 25.0% |
| ! | GTTCTAATTTAGAAGAAAAG+TGG | + | chr5_2:67841262-67841281 | Msa0783690:CDS | 25.0% |
| !!! | TTAACCTTGCTATTACAAAT+TGG | + | chr5_2:67841295-67841314 | Msa0783690:CDS | 25.0% |
| ! | GAAAATGCGTAAGAAAATAA+AGG | - | chr5_2:67841375-67841394 | None:intergenic | 25.0% |
| ! | GTATTGTCCTCTTATAAATA+TGG | + | chr5_2:67841422-67841441 | Msa0783690:CDS | 25.0% |
| ! | ACAACATCCATATTTATAAG+AGG | - | chr5_2:67841432-67841451 | None:intergenic | 25.0% |
| !!! | AAAAAACCTTTTAGGTTTGA+TGG | - | chr5_2:67841669-67841688 | None:intergenic | 25.0% |
| !!! | CTTTGTCTGGATTTTTTTAA+TGG | - | chr5_2:67841761-67841780 | None:intergenic | 25.0% |
| ! | CATTAAAAAAATCCAGACAA+AGG | + | chr5_2:67841759-67841778 | Msa0783690:intron | 25.0% |
| !! | TCATATGGGTCTTATAAAAA+AGG | + | chr5_2:67842033-67842052 | Msa0783690:intron | 25.0% |
| !! | CTCGAAAGGATTTTATAATT+AGG | + | chr5_2:67842068-67842087 | Msa0783690:intron | 25.0% |
| !! | GATTTTATAATTAGGGAATG+AGG | + | chr5_2:67842076-67842095 | Msa0783690:intron | 25.0% |
| ! | AGAAAAAGTAGAGATTTGAT+TGG | - | chr5_2:67842184-67842203 | None:intergenic | 25.0% |
| ! | AAGAATCAAAACAAAAGAGA+GGG | - | chr5_2:67842242-67842261 | None:intergenic | 25.0% |
| ! | TAAGAATCAAAACAAAAGAG+AGG | - | chr5_2:67842243-67842262 | None:intergenic | 25.0% |
| ! | ATACTCGTTGTACTTAAATT+TGG | + | chr5_2:67842291-67842310 | Msa0783690:intron | 25.0% |
| ! | ATACACTTAATACTTGATGT+TGG | - | chr5_2:67842602-67842621 | None:intergenic | 25.0% |
| ! | ACATCAAGTATTAAGTGTAT+CGG | + | chr5_2:67842602-67842621 | Msa0783690:CDS | 25.0% |
| ! | ATCTTCAGAAAATCCAATAA+TGG | + | chr5_2:67842632-67842651 | Msa0783690:CDS | 25.0% |
| !! | GAAAATCCAATAATGGAAAT+AGG | + | chr5_2:67842639-67842658 | Msa0783690:CDS | 25.0% |
| !! | AAATTTGAAGAATCGGTTTA+TGG | + | chr5_2:67842762-67842781 | Msa0783690:CDS | 25.0% |
| ! | GTTATAGTGCAAATTTGAAT+TGG | + | chr5_2:67842784-67842803 | Msa0783690:CDS | 25.0% |
| ! | AATTAATTAACCCTAAGTCT+TGG | + | chr5_2:67842865-67842884 | Msa0783690:CDS | 25.0% |
| ! | CTTATTTGCCTAATAAGTAT+AGG | + | chr5_2:67843045-67843064 | Msa0783690:CDS | 25.0% |
| ! | TAGAATGTCCTATACTTATT+AGG | - | chr5_2:67843056-67843075 | None:intergenic | 25.0% |
| !! | ATTTTATTGCTAGGTTTGAA+TGG | - | chr5_2:67840958-67840977 | None:intergenic | 25.0% |
| !! | TCATGTGATATTTTATTGCT+AGG | - | chr5_2:67840967-67840986 | None:intergenic | 25.0% |
| ! | ATTAACAAGGAGATTTGAAA+TGG | - | chr5_2:67840995-67841014 | None:intergenic | 25.0% |
| ! | TGTCTTGTATGAAATTAACA+AGG | - | chr5_2:67841008-67841027 | None:intergenic | 25.0% |
| !!! | GTTTTGGAAATTTAATGAAG+AGG | - | chr5_2:67841065-67841084 | None:intergenic | 25.0% |
| !!! | TTTGGAATAGTTTCAAGTTT+TGG | - | chr5_2:67841081-67841100 | None:intergenic | 25.0% |
| ! | TTGAAAATGTCACTAAAGTT+TGG | - | chr5_2:67841099-67841118 | None:intergenic | 25.0% |
| !! | AAGTTGTTGATGAAACTATT+AGG | + | chr5_2:67841240-67841259 | Msa0783690:CDS | 25.0% |
| ! | GTTCTAATTTAGAAGAAAAG+TGG | + | chr5_2:67841262-67841281 | Msa0783690:CDS | 25.0% |
| !!! | TTAACCTTGCTATTACAAAT+TGG | + | chr5_2:67841295-67841314 | Msa0783690:CDS | 25.0% |
| ! | GAAAATGCGTAAGAAAATAA+AGG | - | chr5_2:67841375-67841394 | None:intergenic | 25.0% |
| ! | GTATTGTCCTCTTATAAATA+TGG | + | chr5_2:67841422-67841441 | Msa0783690:CDS | 25.0% |
| ! | ACAACATCCATATTTATAAG+AGG | - | chr5_2:67841432-67841451 | None:intergenic | 25.0% |
| !!! | AAAAAACCTTTTAGGTTTGA+TGG | - | chr5_2:67841669-67841688 | None:intergenic | 25.0% |
| !!! | CTTTGTCTGGATTTTTTTAA+TGG | - | chr5_2:67841761-67841780 | None:intergenic | 25.0% |
| ! | CATTAAAAAAATCCAGACAA+AGG | + | chr5_2:67841759-67841778 | Msa0783690:intron | 25.0% |
| !! | TCATATGGGTCTTATAAAAA+AGG | + | chr5_2:67842033-67842052 | Msa0783690:intron | 25.0% |
| !! | CTCGAAAGGATTTTATAATT+AGG | + | chr5_2:67842068-67842087 | Msa0783690:intron | 25.0% |
| !! | GATTTTATAATTAGGGAATG+AGG | + | chr5_2:67842076-67842095 | Msa0783690:intron | 25.0% |
| ! | AGAAAAAGTAGAGATTTGAT+TGG | - | chr5_2:67842184-67842203 | None:intergenic | 25.0% |
| ! | AAGAATCAAAACAAAAGAGA+GGG | - | chr5_2:67842242-67842261 | None:intergenic | 25.0% |
| ! | TAAGAATCAAAACAAAAGAG+AGG | - | chr5_2:67842243-67842262 | None:intergenic | 25.0% |
| ! | ATACTCGTTGTACTTAAATT+TGG | + | chr5_2:67842291-67842310 | Msa0783690:intron | 25.0% |
| ! | ATACACTTAATACTTGATGT+TGG | - | chr5_2:67842602-67842621 | None:intergenic | 25.0% |
| ! | ACATCAAGTATTAAGTGTAT+CGG | + | chr5_2:67842602-67842621 | Msa0783690:CDS | 25.0% |
| ! | ATCTTCAGAAAATCCAATAA+TGG | + | chr5_2:67842632-67842651 | Msa0783690:CDS | 25.0% |
| !! | GAAAATCCAATAATGGAAAT+AGG | + | chr5_2:67842639-67842658 | Msa0783690:CDS | 25.0% |
| !! | AAATTTGAAGAATCGGTTTA+TGG | + | chr5_2:67842762-67842781 | Msa0783690:CDS | 25.0% |
| ! | GTTATAGTGCAAATTTGAAT+TGG | + | chr5_2:67842784-67842803 | Msa0783690:CDS | 25.0% |
| ! | AATTAATTAACCCTAAGTCT+TGG | + | chr5_2:67842865-67842884 | Msa0783690:CDS | 25.0% |
| ! | CTTATTTGCCTAATAAGTAT+AGG | + | chr5_2:67843045-67843064 | Msa0783690:CDS | 25.0% |
| ! | TAGAATGTCCTATACTTATT+AGG | - | chr5_2:67843056-67843075 | None:intergenic | 25.0% |
| ! | AAACTCTTGATGTGTTTTCA+TGG | + | chr5_2:67840749-67840768 | Msa0783690:CDS | 30.0% |
| ! | AACTCTTGATGTGTTTTCAT+GGG | + | chr5_2:67840750-67840769 | Msa0783690:CDS | 30.0% |
| TAGCAATGAACATAAGCTTA+AGG | - | chr5_2:67840821-67840840 | None:intergenic | 30.0% | |
| !!! | TGATTGGTGGTTTTTTGATA+TGG | - | chr5_2:67840872-67840891 | None:intergenic | 30.0% |
| ! | CAAAAGAGAGTTTTTGTGAT+TGG | - | chr5_2:67840888-67840907 | None:intergenic | 30.0% |
| !!! | AAAACTCTCTTTTGCTATTG+TGG | + | chr5_2:67840894-67840913 | Msa0783690:CDS | 30.0% |
| TTGAGGTCCAAAGAAAAATA+GGG | - | chr5_2:67840933-67840952 | None:intergenic | 30.0% | |
| ! | TTTGAGGTCCAAAGAAAAAT+AGG | - | chr5_2:67840934-67840953 | None:intergenic | 30.0% |
| TTGTATTTATGAAGCTCCTT+CGG | + | chr5_2:67841149-67841168 | Msa0783690:CDS | 30.0% | |
| GCAATAAAGGAACAATTATC+AGG | + | chr5_2:67841195-67841214 | Msa0783690:CDS | 30.0% | |
| CAATCCAATTTGTAATAGCA+AGG | - | chr5_2:67841302-67841321 | None:intergenic | 30.0% | |
| TGCTATTACAAATTGGATTG+TGG | + | chr5_2:67841302-67841321 | Msa0783690:CDS | 30.0% | |
| ! | TCTTACGCATTTTCAACATT+TGG | + | chr5_2:67841381-67841400 | Msa0783690:CDS | 30.0% |
| ! | CTTACGCATTTTCAACATTT+GGG | + | chr5_2:67841382-67841401 | Msa0783690:CDS | 30.0% |
| CTCAAATATCAACAACTTGA+AGG | + | chr5_2:67841495-67841514 | Msa0783690:CDS | 30.0% | |
| ATGTTTCCATCAAACCTAAA+AGG | + | chr5_2:67841660-67841679 | Msa0783690:intron | 30.0% | |
| GTTGCAATGATATTCTTGAT+GGG | - | chr5_2:67842566-67842585 | None:intergenic | 30.0% | |
| AGTTGCAATGATATTCTTGA+TGG | - | chr5_2:67842567-67842586 | None:intergenic | 30.0% | |
| TTGGTTTCTTCATGATAGTA+TGG | + | chr5_2:67842803-67842822 | Msa0783690:CDS | 30.0% | |
| TTTCTTCATGATAGTATGGA+TGG | + | chr5_2:67842807-67842826 | Msa0783690:CDS | 30.0% | |
| TATCTCTAAACCAAGACTTA+GGG | - | chr5_2:67842878-67842897 | None:intergenic | 30.0% | |
| !! | ATTTTTGCTGGTGATGAATA+TGG | + | chr5_2:67842942-67842961 | Msa0783690:CDS | 30.0% |
| !! | AAAGTTGATAAAAGTGCTAG+AGG | + | chr5_2:67842981-67843000 | Msa0783690:CDS | 30.0% |
| !! | AAGTTGATAAAAGTGCTAGA+GGG | + | chr5_2:67842982-67843001 | Msa0783690:CDS | 30.0% |
| AGATTATGGAATGGGAAATA+AGG | + | chr5_2:67843006-67843025 | Msa0783690:CDS | 30.0% | |
| GATTATGGAATGGGAAATAA+GGG | + | chr5_2:67843007-67843026 | Msa0783690:CDS | 30.0% | |
| ATTATGGAATGGGAAATAAG+GGG | + | chr5_2:67843008-67843027 | Msa0783690:CDS | 30.0% | |
| TAAGCTAAGGAATATTGAGA+TGG | - | chr5_2:67843115-67843134 | None:intergenic | 30.0% | |
| ATCTCAATATTCCTTAGCTT+AGG | + | chr5_2:67843114-67843133 | Msa0783690:exon | 30.0% | |
| ! | AAACTCTTGATGTGTTTTCA+TGG | + | chr5_2:67840749-67840768 | Msa0783690:CDS | 30.0% |
| ! | AACTCTTGATGTGTTTTCAT+GGG | + | chr5_2:67840750-67840769 | Msa0783690:CDS | 30.0% |
| TAGCAATGAACATAAGCTTA+AGG | - | chr5_2:67840821-67840840 | None:intergenic | 30.0% | |
| !!! | TGATTGGTGGTTTTTTGATA+TGG | - | chr5_2:67840872-67840891 | None:intergenic | 30.0% |
| ! | CAAAAGAGAGTTTTTGTGAT+TGG | - | chr5_2:67840888-67840907 | None:intergenic | 30.0% |
| !!! | AAAACTCTCTTTTGCTATTG+TGG | + | chr5_2:67840894-67840913 | Msa0783690:CDS | 30.0% |
| TTGAGGTCCAAAGAAAAATA+GGG | - | chr5_2:67840933-67840952 | None:intergenic | 30.0% | |
| ! | TTTGAGGTCCAAAGAAAAAT+AGG | - | chr5_2:67840934-67840953 | None:intergenic | 30.0% |
| TTGTATTTATGAAGCTCCTT+CGG | + | chr5_2:67841149-67841168 | Msa0783690:CDS | 30.0% | |
| GCAATAAAGGAACAATTATC+AGG | + | chr5_2:67841195-67841214 | Msa0783690:CDS | 30.0% | |
| CAATCCAATTTGTAATAGCA+AGG | - | chr5_2:67841302-67841321 | None:intergenic | 30.0% | |
| TGCTATTACAAATTGGATTG+TGG | + | chr5_2:67841302-67841321 | Msa0783690:CDS | 30.0% | |
| ! | TCTTACGCATTTTCAACATT+TGG | + | chr5_2:67841381-67841400 | Msa0783690:CDS | 30.0% |
| ! | CTTACGCATTTTCAACATTT+GGG | + | chr5_2:67841382-67841401 | Msa0783690:CDS | 30.0% |
| CTCAAATATCAACAACTTGA+AGG | + | chr5_2:67841495-67841514 | Msa0783690:CDS | 30.0% | |
| ATGTTTCCATCAAACCTAAA+AGG | + | chr5_2:67841660-67841679 | Msa0783690:intron | 30.0% | |
| GTTGCAATGATATTCTTGAT+GGG | - | chr5_2:67842566-67842585 | None:intergenic | 30.0% | |
| AGTTGCAATGATATTCTTGA+TGG | - | chr5_2:67842567-67842586 | None:intergenic | 30.0% | |
| TTGGTTTCTTCATGATAGTA+TGG | + | chr5_2:67842803-67842822 | Msa0783690:CDS | 30.0% | |
| TTTCTTCATGATAGTATGGA+TGG | + | chr5_2:67842807-67842826 | Msa0783690:CDS | 30.0% | |
| TATCTCTAAACCAAGACTTA+GGG | - | chr5_2:67842878-67842897 | None:intergenic | 30.0% | |
| !! | ATTTTTGCTGGTGATGAATA+TGG | + | chr5_2:67842942-67842961 | Msa0783690:CDS | 30.0% |
| !! | AAAGTTGATAAAAGTGCTAG+AGG | + | chr5_2:67842981-67843000 | Msa0783690:CDS | 30.0% |
| !! | AAGTTGATAAAAGTGCTAGA+GGG | + | chr5_2:67842982-67843001 | Msa0783690:CDS | 30.0% |
| AGATTATGGAATGGGAAATA+AGG | + | chr5_2:67843006-67843025 | Msa0783690:CDS | 30.0% | |
| GATTATGGAATGGGAAATAA+GGG | + | chr5_2:67843007-67843026 | Msa0783690:CDS | 30.0% | |
| ATTATGGAATGGGAAATAAG+GGG | + | chr5_2:67843008-67843027 | Msa0783690:CDS | 30.0% | |
| TAAGCTAAGGAATATTGAGA+TGG | - | chr5_2:67843115-67843134 | None:intergenic | 30.0% | |
| ATCTCAATATTCCTTAGCTT+AGG | + | chr5_2:67843114-67843133 | Msa0783690:exon | 30.0% | |
| ! | CATAGAACCTGTTTTCCATT+CGG | - | chr5_2:67840797-67840816 | None:intergenic | 35.0% |
| GATATGGTGAGATTAAGTGA+TGG | - | chr5_2:67840856-67840875 | None:intergenic | 35.0% | |
| ! | AAGAGAGTTTTTGTGATTGG+TGG | - | chr5_2:67840885-67840904 | None:intergenic | 35.0% |
| GCGTAAGAAAATAAAGGAGA+TGG | - | chr5_2:67841369-67841388 | None:intergenic | 35.0% | |
| TGGTGAACATTGACAACATA+AGG | + | chr5_2:67841571-67841590 | Msa0783690:CDS | 35.0% | |
| !!! | GGTTTTTTTTCTCCTTTGTC+TGG | - | chr5_2:67841774-67841793 | None:intergenic | 35.0% |
| ! | TGTTTTATATGTAGAGACGG+AGG | - | chr5_2:67841819-67841838 | None:intergenic | 35.0% |
| !!! | GGACTCATTTTTTTCTCGAA+AGG | + | chr5_2:67842054-67842073 | Msa0783690:intron | 35.0% |
| AGCTCCTCTTTCATTCATAA+GGG | - | chr5_2:67842523-67842542 | None:intergenic | 35.0% | |
| AATACTTGATGTTGGAGTGT+TGG | - | chr5_2:67842594-67842613 | None:intergenic | 35.0% | |
| ! | CAAGTATTAAGTGTATCGGT+TGG | + | chr5_2:67842606-67842625 | Msa0783690:CDS | 35.0% |
| ! | TCCAATAATGGAAATAGGCA+TGG | + | chr5_2:67842644-67842663 | Msa0783690:CDS | 35.0% |
| TCCATGCCTATTTCCATTAT+TGG | - | chr5_2:67842648-67842667 | None:intergenic | 35.0% | |
| !! | AGGCTTTAAACTCATTGTTG+TGG | - | chr5_2:67842739-67842758 | None:intergenic | 35.0% |
| ! | CAACAATGAGTTTAAAGCCT+TGG | + | chr5_2:67842739-67842758 | Msa0783690:CDS | 35.0% |
| GCCTTGGAAATTTGAAGAAT+CGG | + | chr5_2:67842755-67842774 | Msa0783690:CDS | 35.0% | |
| ! | ACCGATTCTTCAAATTTCCA+AGG | - | chr5_2:67842759-67842778 | None:intergenic | 35.0% |
| CTATCTCTAAACCAAGACTT+AGG | - | chr5_2:67842879-67842898 | None:intergenic | 35.0% | |
| CTAAGTCTTGGTTTAGAGAT+AGG | + | chr5_2:67842877-67842896 | Msa0783690:CDS | 35.0% | |
| ! | TATCGTCCTTTTACTAGACA+AGG | + | chr5_2:67842912-67842931 | Msa0783690:CDS | 35.0% |
| ! | AATATGGAGAAAGTGTGTGT+TGG | + | chr5_2:67842958-67842977 | Msa0783690:CDS | 35.0% |
| TAGAGGGAAGATTATGGAAT+GGG | + | chr5_2:67842998-67843017 | Msa0783690:CDS | 35.0% | |
| ! | CATAGAACCTGTTTTCCATT+CGG | - | chr5_2:67840797-67840816 | None:intergenic | 35.0% |
| GATATGGTGAGATTAAGTGA+TGG | - | chr5_2:67840856-67840875 | None:intergenic | 35.0% | |
| ! | AAGAGAGTTTTTGTGATTGG+TGG | - | chr5_2:67840885-67840904 | None:intergenic | 35.0% |
| GCGTAAGAAAATAAAGGAGA+TGG | - | chr5_2:67841369-67841388 | None:intergenic | 35.0% | |
| TGGTGAACATTGACAACATA+AGG | + | chr5_2:67841571-67841590 | Msa0783690:CDS | 35.0% | |
| !!! | GGTTTTTTTTCTCCTTTGTC+TGG | - | chr5_2:67841774-67841793 | None:intergenic | 35.0% |
| ! | TGTTTTATATGTAGAGACGG+AGG | - | chr5_2:67841819-67841838 | None:intergenic | 35.0% |
| !!! | GGACTCATTTTTTTCTCGAA+AGG | + | chr5_2:67842054-67842073 | Msa0783690:intron | 35.0% |
| AGCTCCTCTTTCATTCATAA+GGG | - | chr5_2:67842523-67842542 | None:intergenic | 35.0% | |
| AATACTTGATGTTGGAGTGT+TGG | - | chr5_2:67842594-67842613 | None:intergenic | 35.0% | |
| ! | CAAGTATTAAGTGTATCGGT+TGG | + | chr5_2:67842606-67842625 | Msa0783690:CDS | 35.0% |
| ! | TCCAATAATGGAAATAGGCA+TGG | + | chr5_2:67842644-67842663 | Msa0783690:CDS | 35.0% |
| TCCATGCCTATTTCCATTAT+TGG | - | chr5_2:67842648-67842667 | None:intergenic | 35.0% | |
| !! | AGGCTTTAAACTCATTGTTG+TGG | - | chr5_2:67842739-67842758 | None:intergenic | 35.0% |
| ! | CAACAATGAGTTTAAAGCCT+TGG | + | chr5_2:67842739-67842758 | Msa0783690:CDS | 35.0% |
| GCCTTGGAAATTTGAAGAAT+CGG | + | chr5_2:67842755-67842774 | Msa0783690:CDS | 35.0% | |
| ! | ACCGATTCTTCAAATTTCCA+AGG | - | chr5_2:67842759-67842778 | None:intergenic | 35.0% |
| CTATCTCTAAACCAAGACTT+AGG | - | chr5_2:67842879-67842898 | None:intergenic | 35.0% | |
| CTAAGTCTTGGTTTAGAGAT+AGG | + | chr5_2:67842877-67842896 | Msa0783690:CDS | 35.0% | |
| ! | TATCGTCCTTTTACTAGACA+AGG | + | chr5_2:67842912-67842931 | Msa0783690:CDS | 35.0% |
| ! | AATATGGAGAAAGTGTGTGT+TGG | + | chr5_2:67842958-67842977 | Msa0783690:CDS | 35.0% |
| TAGAGGGAAGATTATGGAAT+GGG | + | chr5_2:67842998-67843017 | Msa0783690:CDS | 35.0% | |
| ATCTTCCACCAATATCCGAA+TGG | + | chr5_2:67840779-67840798 | Msa0783690:CDS | 40.0% | |
| ! | GTTTTCCATTCGGATATTGG+TGG | - | chr5_2:67840787-67840806 | None:intergenic | 40.0% |
| ! | CCTGTTTTCCATTCGGATAT+TGG | - | chr5_2:67840790-67840809 | None:intergenic | 40.0% |
| CCAATATCCGAATGGAAAAC+AGG | + | chr5_2:67840787-67840806 | Msa0783690:CDS | 40.0% | |
| !! | GCTAGGTTTGAATGGTTTTG+AGG | - | chr5_2:67840950-67840969 | None:intergenic | 40.0% |
| TGGGTGTCTTAGTGCAATAA+AGG | + | chr5_2:67841182-67841201 | Msa0783690:CDS | 40.0% | |
| ! | ACGCATTTTCAACATTTGGG+TGG | + | chr5_2:67841385-67841404 | Msa0783690:CDS | 40.0% |
| ! | CATTTTCAACATTTGGGTGG+TGG | + | chr5_2:67841388-67841407 | Msa0783690:CDS | 40.0% |
| CAACCACAAAGCCTTTATCA+AGG | + | chr5_2:67841530-67841549 | Msa0783690:CDS | 40.0% | |
| TCTCCTTGATAAAGGCTTTG+TGG | - | chr5_2:67841536-67841555 | None:intergenic | 40.0% | |
| AAGCCTTTATCAAGGAGAAG+TGG | + | chr5_2:67841538-67841557 | Msa0783690:CDS | 40.0% | |
| AGCCTTTATCAAGGAGAAGT+GGG | + | chr5_2:67841539-67841558 | Msa0783690:CDS | 40.0% | |
| ATGTTCGTACGTATTACGAG+TGG | + | chr5_2:67842208-67842227 | Msa0783690:intron | 40.0% | |
| GACACCCTTATGAATGAAAG+AGG | + | chr5_2:67842516-67842535 | Msa0783690:CDS | 40.0% | |
| CAGCTCCTCTTTCATTCATA+AGG | - | chr5_2:67842524-67842543 | None:intergenic | 40.0% | |
| CTTATGAATGAAAGAGGAGC+TGG | + | chr5_2:67842522-67842541 | Msa0783690:CDS | 40.0% | |
| CAACCAACAAATCCCTACAT+AGG | + | chr5_2:67842690-67842709 | Msa0783690:CDS | 40.0% | |
| AGTCCTATGTAGGGATTTGT+TGG | - | chr5_2:67842696-67842715 | None:intergenic | 40.0% | |
| GATACGTTGAGTCCTATGTA+GGG | - | chr5_2:67842705-67842724 | None:intergenic | 40.0% | |
| TGATACGTTGAGTCCTATGT+AGG | - | chr5_2:67842706-67842725 | None:intergenic | 40.0% | |
| ! | GTCCTTTTACTAGACAAGGT+GGG | + | chr5_2:67842916-67842935 | Msa0783690:CDS | 40.0% |
| ! | TCCTTTTACTAGACAAGGTG+GGG | + | chr5_2:67842917-67842936 | Msa0783690:CDS | 40.0% |
| AAGTGCTAGAGGGAAGATTA+TGG | + | chr5_2:67842992-67843011 | Msa0783690:CDS | 40.0% | |
| CTAGAGGGAAGATTATGGAA+TGG | + | chr5_2:67842997-67843016 | Msa0783690:CDS | 40.0% | |
| GGACATTCTACCATGAAACT+AGG | + | chr5_2:67843066-67843085 | Msa0783690:CDS | 40.0% | |
| CATTCTACCATGAAACTAGG+AGG | + | chr5_2:67843069-67843088 | Msa0783690:CDS | 40.0% | |
| AAACTAGGAGGTTGGAGTTT+AGG | + | chr5_2:67843081-67843100 | Msa0783690:CDS | 40.0% | |
| AACTAGGAGGTTGGAGTTTA+GGG | + | chr5_2:67843082-67843101 | Msa0783690:CDS | 40.0% | |
| TCTGCGTTATTCCTAAGCTA+AGG | - | chr5_2:67843128-67843147 | None:intergenic | 40.0% | |
| ATCTTCCACCAATATCCGAA+TGG | + | chr5_2:67840779-67840798 | Msa0783690:CDS | 40.0% | |
| ! | GTTTTCCATTCGGATATTGG+TGG | - | chr5_2:67840787-67840806 | None:intergenic | 40.0% |
| ! | CCTGTTTTCCATTCGGATAT+TGG | - | chr5_2:67840790-67840809 | None:intergenic | 40.0% |
| CCAATATCCGAATGGAAAAC+AGG | + | chr5_2:67840787-67840806 | Msa0783690:CDS | 40.0% | |
| !! | GCTAGGTTTGAATGGTTTTG+AGG | - | chr5_2:67840950-67840969 | None:intergenic | 40.0% |
| TGGGTGTCTTAGTGCAATAA+AGG | + | chr5_2:67841182-67841201 | Msa0783690:CDS | 40.0% | |
| ! | ACGCATTTTCAACATTTGGG+TGG | + | chr5_2:67841385-67841404 | Msa0783690:CDS | 40.0% |
| ! | CATTTTCAACATTTGGGTGG+TGG | + | chr5_2:67841388-67841407 | Msa0783690:CDS | 40.0% |
| CAACCACAAAGCCTTTATCA+AGG | + | chr5_2:67841530-67841549 | Msa0783690:CDS | 40.0% | |
| TCTCCTTGATAAAGGCTTTG+TGG | - | chr5_2:67841536-67841555 | None:intergenic | 40.0% | |
| AAGCCTTTATCAAGGAGAAG+TGG | + | chr5_2:67841538-67841557 | Msa0783690:CDS | 40.0% | |
| AGCCTTTATCAAGGAGAAGT+GGG | + | chr5_2:67841539-67841558 | Msa0783690:CDS | 40.0% | |
| ATGTTCGTACGTATTACGAG+TGG | + | chr5_2:67842208-67842227 | Msa0783690:intron | 40.0% | |
| GACACCCTTATGAATGAAAG+AGG | + | chr5_2:67842516-67842535 | Msa0783690:CDS | 40.0% | |
| CAGCTCCTCTTTCATTCATA+AGG | - | chr5_2:67842524-67842543 | None:intergenic | 40.0% | |
| CTTATGAATGAAAGAGGAGC+TGG | + | chr5_2:67842522-67842541 | Msa0783690:CDS | 40.0% | |
| CAACCAACAAATCCCTACAT+AGG | + | chr5_2:67842690-67842709 | Msa0783690:CDS | 40.0% | |
| AGTCCTATGTAGGGATTTGT+TGG | - | chr5_2:67842696-67842715 | None:intergenic | 40.0% | |
| GATACGTTGAGTCCTATGTA+GGG | - | chr5_2:67842705-67842724 | None:intergenic | 40.0% | |
| TGATACGTTGAGTCCTATGT+AGG | - | chr5_2:67842706-67842725 | None:intergenic | 40.0% | |
| ! | GTCCTTTTACTAGACAAGGT+GGG | + | chr5_2:67842916-67842935 | Msa0783690:CDS | 40.0% |
| ! | TCCTTTTACTAGACAAGGTG+GGG | + | chr5_2:67842917-67842936 | Msa0783690:CDS | 40.0% |
| AAGTGCTAGAGGGAAGATTA+TGG | + | chr5_2:67842992-67843011 | Msa0783690:CDS | 40.0% | |
| CTAGAGGGAAGATTATGGAA+TGG | + | chr5_2:67842997-67843016 | Msa0783690:CDS | 40.0% | |
| GGACATTCTACCATGAAACT+AGG | + | chr5_2:67843066-67843085 | Msa0783690:CDS | 40.0% | |
| CATTCTACCATGAAACTAGG+AGG | + | chr5_2:67843069-67843088 | Msa0783690:CDS | 40.0% | |
| AAACTAGGAGGTTGGAGTTT+AGG | + | chr5_2:67843081-67843100 | Msa0783690:CDS | 40.0% | |
| AACTAGGAGGTTGGAGTTTA+GGG | + | chr5_2:67843082-67843101 | Msa0783690:CDS | 40.0% | |
| TCTGCGTTATTCCTAAGCTA+AGG | - | chr5_2:67843128-67843147 | None:intergenic | 40.0% | |
| CTCCTTCGGATCTTCGTTAT+GGG | + | chr5_2:67841163-67841182 | Msa0783690:CDS | 45.0% | |
| GACCCACTTCTCCTTGATAA+AGG | - | chr5_2:67841544-67841563 | None:intergenic | 45.0% | |
| ATAGGACTCAACGTATCAGC+TGG | + | chr5_2:67842708-67842727 | Msa0783690:CDS | 45.0% | |
| ! | CGTCCTTTTACTAGACAAGG+TGG | + | chr5_2:67842915-67842934 | Msa0783690:CDS | 45.0% |
| ACCCCACCTTGTCTAGTAAA+AGG | - | chr5_2:67842921-67842940 | None:intergenic | 45.0% | |
| !!! | CAAGGTGGGGTTATTTTTGC+TGG | + | chr5_2:67842930-67842949 | Msa0783690:CDS | 45.0% |
| TGGAATGGGAAATAAGGGGT+TGG | + | chr5_2:67843012-67843031 | Msa0783690:CDS | 45.0% | |
| GGGAAATAAGGGGTTGGATA+TGG | + | chr5_2:67843018-67843037 | Msa0783690:CDS | 45.0% | |
| CTACCATGAAACTAGGAGGT+TGG | + | chr5_2:67843073-67843092 | Msa0783690:CDS | 45.0% | |
| ACTCCAACCTCCTAGTTTCA+TGG | - | chr5_2:67843079-67843098 | None:intergenic | 45.0% | |
| CTCCTTCGGATCTTCGTTAT+GGG | + | chr5_2:67841163-67841182 | Msa0783690:CDS | 45.0% | |
| GACCCACTTCTCCTTGATAA+AGG | - | chr5_2:67841544-67841563 | None:intergenic | 45.0% | |
| ATAGGACTCAACGTATCAGC+TGG | + | chr5_2:67842708-67842727 | Msa0783690:CDS | 45.0% | |
| ! | CGTCCTTTTACTAGACAAGG+TGG | + | chr5_2:67842915-67842934 | Msa0783690:CDS | 45.0% |
| ACCCCACCTTGTCTAGTAAA+AGG | - | chr5_2:67842921-67842940 | None:intergenic | 45.0% | |
| !!! | CAAGGTGGGGTTATTTTTGC+TGG | + | chr5_2:67842930-67842949 | Msa0783690:CDS | 45.0% |
| TGGAATGGGAAATAAGGGGT+TGG | + | chr5_2:67843012-67843031 | Msa0783690:CDS | 45.0% | |
| GGGAAATAAGGGGTTGGATA+TGG | + | chr5_2:67843018-67843037 | Msa0783690:CDS | 45.0% | |
| CTACCATGAAACTAGGAGGT+TGG | + | chr5_2:67843073-67843092 | Msa0783690:CDS | 45.0% | |
| ACTCCAACCTCCTAGTTTCA+TGG | - | chr5_2:67843079-67843098 | None:intergenic | 45.0% | |
| GCTCCTTCGGATCTTCGTTA+TGG | + | chr5_2:67841162-67841181 | Msa0783690:CDS | 50.0% | |
| CACCCATAACGAAGATCCGA+AGG | - | chr5_2:67841168-67841187 | None:intergenic | 50.0% | |
| GGAGAAGTGGGTCGAAATCA+TGG | + | chr5_2:67841551-67841570 | Msa0783690:CDS | 50.0% | |
| GCTCCTTCGGATCTTCGTTA+TGG | + | chr5_2:67841162-67841181 | Msa0783690:CDS | 50.0% | |
| CACCCATAACGAAGATCCGA+AGG | - | chr5_2:67841168-67841187 | None:intergenic | 50.0% | |
| GGAGAAGTGGGTCGAAATCA+TGG | + | chr5_2:67841551-67841570 | Msa0783690:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 67840736 | 67843147 | 67840736 | ID=Msa0783690;Name=Msa0783690 |
| chr5_2 | mRNA | 67840736 | 67843147 | 67840736 | ID=Msa0783690-mRNA-1;Parent=Msa0783690;Name=Msa0783690-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|17|498 |
| chr5_2 | exon | 67840736 | 67841592 | 67840736 | ID=Msa0783690-mRNA-1:exon:20302;Parent=Msa0783690-mRNA-1 |
| chr5_2 | exon | 67842491 | 67843147 | 67842491 | ID=Msa0783690-mRNA-1:exon:20303;Parent=Msa0783690-mRNA-1 |
| chr5_2 | CDS | 67840736 | 67841592 | 67840736 | ID=Msa0783690-mRNA-1:cds;Parent=Msa0783690-mRNA-1 |
| chr5_2 | CDS | 67842491 | 67843130 | 67842491 | ID=Msa0783690-mRNA-1:cds;Parent=Msa0783690-mRNA-1 |
| chr5_2 | three_prime_UTR | 67843131 | 67843147 | 67843131 | ID=Msa0783690-mRNA-1:three_prime_utr;Parent=Msa0783690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
