AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0802070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802070 MtrunA17_Chr5g0409311 89.902 307 14 3 1 300 1 297 0.0 540
Msa0802070 MtrunA17_Chr7g0251451 50.673 223 98 3 41 263 41 251 1.58e-73 228
Msa0802070 MtrunA17_Chr7g0270061 48.148 189 96 1 96 282 113 301 2.28e-57 186
Msa0802070 MtrunA17_Chr1g0194601 48.677 189 95 1 96 282 116 304 5.26e-57 186
Msa0802070 MtrunA17_Chr4g0038261 41.270 189 110 1 78 265 31 219 5.13e-48 160
Msa0802070 MtrunA17_Chr4g0034751 40.957 188 111 0 78 265 86 273 1.94e-47 160
Msa0802070 MtrunA17_Chr4g0056771 33.488 215 136 2 55 262 52 266 7.48e-37 132
Msa0802070 MtrunA17_Chr1g0207341 33.146 178 109 2 95 262 159 336 4.89e-27 108
Msa0802070 MtrunA17_Chr4g0055551 35.519 183 110 1 91 265 104 286 1.09e-26 106
Msa0802070 MtrunA17_Chr7g0272191 30.189 265 160 4 30 281 61 313 2.17e-26 105
Msa0802070 MtrunA17_Chr4g0015831 38.525 122 69 2 69 190 6 121 4.73e-24 94.4
Msa0802070 MtrunA17_CPg0492721 38.525 122 69 2 69 190 6 121 4.73e-24 94.4
Msa0802070 MtrunA17_Chr1g0184041 41.463 82 48 0 105 186 100 181 1.60e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802070 AT5G45390.1 80.531 226 40 1 79 300 67 292 9.91e-125 358
Msa0802070 AT1G66670.1 52.128 188 90 0 76 263 70 257 4.47e-66 209
Msa0802070 AT1G02560.1 52.096 167 80 0 96 262 119 285 2.07e-58 189
Msa0802070 AT1G11750.2 41.489 188 110 0 78 265 101 288 1.45e-48 164
Msa0802070 AT1G11750.1 41.489 188 110 0 78 265 83 270 1.81e-48 163
Msa0802070 AT5G23140.1 40.642 187 110 1 78 263 34 220 6.92e-48 160
Msa0802070 ATCG00670.1 41.279 172 100 1 91 261 22 193 1.27e-40 140
Msa0802070 AT1G12410.1 36.047 172 110 0 91 262 89 260 7.56e-38 135
Msa0802070 AT4G17040.1 39.344 183 103 1 91 265 105 287 1.72e-36 132
Msa0802070 AT1G09130.2 32.171 258 155 4 27 264 48 305 1.76e-30 117
Msa0802070 AT1G09130.1 32.171 258 155 4 27 264 48 305 1.76e-30 117
Msa0802070 AT1G09130.3 32.171 258 155 4 27 264 48 305 4.13e-30 117
Msa0802070 AT1G49970.1 36.316 190 111 2 86 265 166 355 4.04e-29 115

Find 101 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGTTAAAGTTAGAATCTT+TGG 0.193531 5_3:-16252980 None:intergenic
TAACAAACTCTGAAAATTTC+AGG 0.194159 5_3:+16256666 Msa0802070:three_prime_UTR
TCAACAAATTTCTCCGTTAC+TGG 0.212003 5_3:-16256740 None:intergenic
TATGAGTCAGTTGTTGCTTT+TGG 0.243942 5_3:+16253158 Msa0802070:CDS
CCAATTGAAGCGGTGGAATA+TGG 0.280288 5_3:+16256403 Msa0802070:CDS
TTGTGCGAAATTGGGATTTA+GGG 0.280536 5_3:-16252915 None:intergenic
GAGGGAGAGGATTGTGTTCT+TGG 0.280653 5_3:+16253101 Msa0802070:CDS
GTACCACTATCTGTCATTAA+AGG 0.292929 5_3:-16256562 None:intergenic
ACGATGCAGTGCAGCTTGTT+AGG 0.293073 5_3:+16256107 Msa0802070:CDS
GTTGTGCGAAATTGGGATTT+AGG 0.304802 5_3:-16252916 None:intergenic
TGATTGGAGTTGTGCGAAAT+TGG 0.314536 5_3:-16252924 None:intergenic
GGCTAGTATATCTCATCATC+TGG 0.332567 5_3:-16256541 None:intergenic
CTTAAAATTCATCCTCTTGC+GGG 0.334949 5_3:+16256601 Msa0802070:three_prime_UTR
CGGGAGATTGTGAGAGAAAT+GGG 0.361682 5_3:-16252786 None:intergenic
AGCAATCATGATTCGCGTAT+TGG 0.378635 5_3:-16256221 None:intergenic
CCATATTCCACCGCTTCAAT+TGG 0.379663 5_3:-16256403 None:intergenic
GCAATCATGATTCGCGTATT+GGG 0.385922 5_3:-16256220 None:intergenic
AAGTTCTGAAAGATATTGAT+AGG 0.386420 5_3:+16256365 Msa0802070:CDS
CATAGCTAGCCGCTTACCTT+TGG 0.401596 5_3:-16256197 None:intergenic
GCGGGAGATTGTGAGAGAAA+TGG 0.408177 5_3:-16252787 None:intergenic
TTTAGGGTTGAAAGAGGAAA+TGG 0.415942 5_3:-16252899 None:intergenic
ATCTCATCATCTGGGATATG+TGG 0.421816 5_3:-16256532 None:intergenic
AAAAGCTTGATATCTTTAGT+AGG 0.425124 5_3:-16253192 None:intergenic
ACTCACCTGGTGGTTCTCTC+AGG 0.429556 5_3:+16253220 Msa0802070:CDS
AGACATTTGAAAAGTGATAG+TGG 0.433505 5_3:-16253016 None:intergenic
AGGGAGAGGATTGTGTTCTT+GGG 0.433833 5_3:+16253102 Msa0802070:CDS
AGAGATGGAAGGGAAGTTGA+AGG 0.438406 5_3:-16252841 None:intergenic
TTCGCCGCAGACGCCGGAAC+GGG 0.440599 5_3:+16253038 Msa0802070:CDS
CGATGCAGTGCAGCTTGTTA+GGG 0.446604 5_3:+16256108 Msa0802070:CDS
GGTGAAGGAAGATATGATTC+TGG 0.447717 5_3:-16256326 None:intergenic
GATTGGAGTTGTGCGAAATT+GGG 0.449197 5_3:-16252923 None:intergenic
CATCTGGGATATGTGGGGTT+AGG 0.459650 5_3:-16256525 None:intergenic
TGGGGTTGTTGTTGAGGGAG+AGG 0.479943 5_3:+16253088 Msa0802070:CDS
TACCATGGGGTTGTTGTTGA+GGG 0.483612 5_3:+16253083 Msa0802070:CDS
GTTGTGAGGACGCAGTTGAT+TGG 0.490594 5_3:-16252940 None:intergenic
TGGAATATGGAATTATTGAC+GGG 0.496102 5_3:+16256416 Msa0802070:CDS
GACATTTGAAAAGTGATAGT+GGG 0.498851 5_3:-16253015 None:intergenic
GTTGTGAGGAAATCCATTGC+GGG 0.501706 5_3:-16252805 None:intergenic
TCTCCTGCCAGTGCCAGAAA+AGG 0.502016 5_3:+16256465 Msa0802070:CDS
TTAGGGTTGAAAGAGGAAAT+GGG 0.503293 5_3:-16252898 None:intergenic
ATCATGATTGCTCAACCACC+TGG 0.504852 5_3:+16256232 Msa0802070:CDS
ATACCATGGGGTTGTTGTTG+AGG 0.505281 5_3:+16253082 Msa0802070:CDS
GTGGAATATGGAATTATTGA+CGG 0.506529 5_3:+16256415 Msa0802070:CDS
TCATCCTCTTGCGGGGCTTG+TGG 0.515562 5_3:+16256609 Msa0802070:three_prime_UTR
ACTTAAAATTCATCCTCTTG+CGG 0.516119 5_3:+16256600 Msa0802070:three_prime_UTR
TCTCATCATCTGGGATATGT+GGG 0.518650 5_3:-16256531 None:intergenic
TTCAAGTGAGCGGCCGGTGA+AGG 0.524114 5_3:-16256341 None:intergenic
GATGTATCCACAATTGCAAT+GGG 0.528030 5_3:+16256133 Msa0802070:CDS
GCTTGTCCACTAGCACCTCC+AGG 0.528362 5_3:-16256250 None:intergenic
TTGGGATTTAGGGTTGAAAG+AGG 0.529185 5_3:-16252905 None:intergenic
GTTAAAGTTAGAATCTTTGG+AGG 0.532290 5_3:-16252977 None:intergenic
ATCCTAGGTGGTGGCACCAA+AGG 0.533029 5_3:+16256181 Msa0802070:CDS
AGTTGAAGGATGAGAAAGAG+AGG 0.534319 5_3:-16252827 None:intergenic
TCAACAGCCTCAATTATCCT+AGG 0.535750 5_3:+16256166 Msa0802070:CDS
GATGAGAAAGAGAGGTTGTG+AGG 0.537990 5_3:-16252819 None:intergenic
TGCAATGCCCATTGCAATTG+TGG 0.538622 5_3:-16256140 None:intergenic
TAGCCTTTAATGACAGATAG+TGG 0.543326 5_3:+16256559 Msa0802070:exon
CAACCACCTGGAGGTGCTAG+TGG 0.544933 5_3:+16256244 Msa0802070:CDS
GGATGTATCCACAATTGCAA+TGG 0.545256 5_3:+16256132 Msa0802070:CDS
AACTTGTTCAAGTGAGCGGC+CGG 0.548501 5_3:-16256347 None:intergenic
CCTGCCAGTGCCAGAAAAGG+TGG 0.557724 5_3:+16256468 Msa0802070:CDS
AGAATCATATCTTCCTTCAC+CGG 0.560830 5_3:+16256328 Msa0802070:CDS
GCGTTGTGAGAGAGATGGAA+GGG 0.566049 5_3:-16252851 None:intergenic
GCCTCAATTATCCTAGGTGG+TGG 0.568197 5_3:+16256172 Msa0802070:CDS
TGCGTTGTGAGAGAGATGGA+AGG 0.571466 5_3:-16252852 None:intergenic
TCAGAACTTGTTCAAGTGAG+CGG 0.571992 5_3:-16256351 None:intergenic
GGTGCTGAATCTGATACCAT+GGG 0.575525 5_3:+16253069 Msa0802070:CDS
AATGTCTTCGCCGCAGACGC+CGG 0.575917 5_3:+16253032 Msa0802070:CDS
AGGTGCTGAATCTGATACCA+TGG 0.582117 5_3:+16253068 Msa0802070:CDS
TCTCTCACAATCTCCCGCAA+TGG 0.585909 5_3:+16252792 Msa0802070:exon
TGCAGTGCAGCTTGTTAGGG+CGG 0.590615 5_3:+16256111 Msa0802070:CDS
GCTAGTATATCTCATCATCT+GGG 0.591085 5_3:-16256540 None:intergenic
GGTTAGGAAATCCGCATCAT+CGG 0.593360 5_3:-16256509 None:intergenic
ATTTCAGGCTTATTGCGTGT+AGG 0.597872 5_3:+16256681 Msa0802070:three_prime_UTR
TAGTAGTTAAGACATAAGAA+AGG 0.600795 5_3:-16256783 None:intergenic
TCTGTCTCCAATTGAAGCGG+TGG 0.605778 5_3:+16256396 Msa0802070:CDS
AGTTCTGAAAGATATTGATA+GGG 0.606120 5_3:+16256366 Msa0802070:CDS
AACACTAAACACCGATGATG+CGG 0.608226 5_3:+16256498 Msa0802070:CDS
TTAAAATTCATCCTCTTGCG+GGG 0.608857 5_3:+16256602 Msa0802070:three_prime_UTR
ACGCCGGAACGGGCTATGAG+AGG 0.609708 5_3:+16253048 Msa0802070:CDS
TTAAAGTTAGAATCTTTGGA+GGG 0.616488 5_3:-16252976 None:intergenic
GCCACCACCTAGGATAATTG+AGG 0.619826 5_3:-16256173 None:intergenic
CTCCCTCAACAACAACCCCA+TGG 0.626982 5_3:-16253085 None:intergenic
TTTCAAATGTGATCCAGTAA+CGG 0.630053 5_3:+16256727 Msa0802070:three_prime_UTR
TATACCACAAGCCCCGCAAG+AGG 0.636600 5_3:-16256613 None:intergenic
ATATCTGTCTCCAATTGAAG+CGG 0.641626 5_3:+16256393 Msa0802070:CDS
GGAATGCGTTGTGAGAGAGA+TGG 0.647598 5_3:-16252856 None:intergenic
TTTAATGACAGATAGTGGTA+CGG 0.652645 5_3:+16256564 Msa0802070:three_prime_UTR
AAAGACAAATAAAACTGCCG+CGG 0.666529 5_3:-16256707 None:intergenic
TACCTTTGGTGCCACCACCT+AGG 0.667716 5_3:-16256183 None:intergenic
GGGTTGAAAGAGGAAATGGG+TGG 0.670632 5_3:-16252895 None:intergenic
CTCATCATCTGGGATATGTG+GGG 0.671388 5_3:-16256530 None:intergenic
TTATTGCGTGTAGGATGCCG+CGG 0.671533 5_3:+16256690 Msa0802070:three_prime_UTR
GGTTGTGAGGAAATCCATTG+CGG 0.680841 5_3:-16252806 None:intergenic
ACAGCCTCAATTATCCTAGG+TGG 0.682148 5_3:+16256169 Msa0802070:CDS
ATGATTGCTCAACCACCTGG+AGG 0.694109 5_3:+16256235 Msa0802070:CDS
GTGGTGGCACCAAAGGTAAG+CGG 0.702250 5_3:+16256188 Msa0802070:CDS
TGTCCACTAGCACCTCCAGG+TGG 0.704733 5_3:-16256247 None:intergenic
GGAATATGGAATTATTGACG+GGG 0.741752 5_3:+16256417 Msa0802070:CDS
TATAACCTGAGAGAACCACC+AGG 0.763852 5_3:-16253225 None:intergenic
GTGCTGAATCTGATACCATG+GGG 0.822614 5_3:+16253070 Msa0802070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAATTGTAAAAAAAAA+AGG + chr5_3:16253385-16253404 Msa0802070:intron 10.0%
!! ATGAAATTGTAAAAAAAAAA+GGG + chr5_3:16253386-16253405 Msa0802070:intron 10.0%
!! TATACATTTATCTATAAAAT+TGG - chr5_3:16255376-16255395 None:intergenic 10.0%
!!! TTTTATAGATAAATGTATAA+AGG + chr5_3:16255377-16255396 Msa0802070:intron 10.0%
!! AATGAAATTGTAAAAAAAAA+AGG + chr5_3:16253385-16253404 Msa0802070:intron 10.0%
!! ATGAAATTGTAAAAAAAAAA+GGG + chr5_3:16253386-16253405 Msa0802070:intron 10.0%
!! TATACATTTATCTATAAAAT+TGG - chr5_3:16255376-16255395 None:intergenic 10.0%
!!! TTTTATAGATAAATGTATAA+AGG + chr5_3:16255377-16255396 Msa0802070:intron 10.0%
!! AATGTTTATAATATTTGCTT+TGG + chr5_3:16253446-16253465 Msa0802070:intron 15.0%
!! AATATAATAGTATAAAATGC+TGG - chr5_3:16254360-16254379 None:intergenic 15.0%
!!! TTATATTTTATTCAATGTGA+TGG + chr5_3:16254373-16254392 Msa0802070:intron 15.0%
!!! CTTTTAAAGAATTTTTTTAG+AGG - chr5_3:16254786-16254805 None:intergenic 15.0%
!! TTTAAAAGTAAAATTGAAGT+AGG + chr5_3:16254798-16254817 Msa0802070:intron 15.0%
!! ATTAATAACAAGTTAACAAA+AGG - chr5_3:16255961-16255980 None:intergenic 15.0%
!! AATGTTTATAATATTTGCTT+TGG + chr5_3:16253446-16253465 Msa0802070:intron 15.0%
!! AATATAATAGTATAAAATGC+TGG - chr5_3:16254360-16254379 None:intergenic 15.0%
!!! TTATATTTTATTCAATGTGA+TGG + chr5_3:16254373-16254392 Msa0802070:intron 15.0%
!!! CTTTTAAAGAATTTTTTTAG+AGG - chr5_3:16254786-16254805 None:intergenic 15.0%
!! TTTAAAAGTAAAATTGAAGT+AGG + chr5_3:16254798-16254817 Msa0802070:intron 15.0%
!! ATTAATAACAAGTTAACAAA+AGG - chr5_3:16255961-16255980 None:intergenic 15.0%
!!! TATAATATTTGCTTTGGAAT+TGG + chr5_3:16253452-16253471 Msa0802070:intron 20.0%
!! AAGATAAGGTTAAACTTAAA+GGG + chr5_3:16253585-16253604 Msa0802070:intron 20.0%
!! TTGGTAAGAAAATACTTAAT+TGG + chr5_3:16253760-16253779 Msa0802070:intron 20.0%
!!! TTTAATATGGGGTATTTTTT+AGG + chr5_3:16253894-16253913 Msa0802070:intron 20.0%
!! AAAAAATTATGCATTTAGTC+TGG + chr5_3:16255068-16255087 Msa0802070:intron 20.0%
!! ATTATTGGATGAATTTCATT+TGG - chr5_3:16255184-16255203 None:intergenic 20.0%
!!! AGTCATTAAACATTTTAACA+TGG - chr5_3:16255437-16255456 None:intergenic 20.0%
!! TAAGGTAAAAAACATAGAAA+TGG - chr5_3:16255668-16255687 None:intergenic 20.0%
!!! TATAATATTTGCTTTGGAAT+TGG + chr5_3:16253452-16253471 Msa0802070:intron 20.0%
!! AAGATAAGGTTAAACTTAAA+GGG + chr5_3:16253585-16253604 Msa0802070:intron 20.0%
!! TTGGTAAGAAAATACTTAAT+TGG + chr5_3:16253760-16253779 Msa0802070:intron 20.0%
!!! TTTAATATGGGGTATTTTTT+AGG + chr5_3:16253894-16253913 Msa0802070:intron 20.0%
!! AAAAAATTATGCATTTAGTC+TGG + chr5_3:16255068-16255087 Msa0802070:intron 20.0%
!! ATTATTGGATGAATTTCATT+TGG - chr5_3:16255184-16255203 None:intergenic 20.0%
!!! AGTCATTAAACATTTTAACA+TGG - chr5_3:16255437-16255456 None:intergenic 20.0%
!! TAAGGTAAAAAACATAGAAA+TGG - chr5_3:16255668-16255687 None:intergenic 20.0%
! TTAAAGTTAGAATCTTTGGA+GGG - chr5_3:16252979-16252998 None:intergenic 25.0%
! AAAAGCTTGATATCTTTAGT+AGG - chr5_3:16253195-16253214 None:intergenic 25.0%
! TTGTATGTGATAAGATAGAT+TGG + chr5_3:16253339-16253358 Msa0802070:intron 25.0%
! ATTGGAAAGATAAGATTAGA+GGG + chr5_3:16253357-16253376 Msa0802070:intron 25.0%
! ATTGGTAAGATAAGCTTAAA+GGG + chr5_3:16253519-16253538 Msa0802070:intron 25.0%
! GAAGATAAGGTTAAACTTAA+AGG + chr5_3:16253584-16253603 Msa0802070:intron 25.0%
! GGTAATGAAATAGACAAAAA+AGG + chr5_3:16253610-16253629 Msa0802070:intron 25.0%
!!! CCTTTTTATGTTAGTTTTGT+GGG + chr5_3:16253643-16253662 Msa0802070:intron 25.0%
!!! CTTTTTATGTTAGTTTTGTG+GGG + chr5_3:16253644-16253663 Msa0802070:intron 25.0%
!!! TTTTTATGTTAGTTTTGTGG+GGG + chr5_3:16253645-16253664 Msa0802070:intron 25.0%
!!! TGCTTCTTTTGATTACATTT+TGG + chr5_3:16253741-16253760 Msa0802070:intron 25.0%
! AAAGGATTGTGTGTTTAATA+TGG + chr5_3:16253881-16253900 Msa0802070:intron 25.0%
! AAGGATTGTGTGTTTAATAT+GGG + chr5_3:16253882-16253901 Msa0802070:intron 25.0%
!!! GGTATTTTTTAGGAGTTTAA+TGG + chr5_3:16253904-16253923 Msa0802070:intron 25.0%
!!! CCGTAGATATTTTTAAATTG+CGG - chr5_3:16254005-16254024 None:intergenic 25.0%
! CCGCAATTTAAAAATATCTA+CGG + chr5_3:16254002-16254021 Msa0802070:intron 25.0%
! TATCAGAATCAATATGAAAC+AGG - chr5_3:16254107-16254126 None:intergenic 25.0%
! ATTCATTAGATTGTTAGTGA+TGG + chr5_3:16254308-16254327 Msa0802070:intron 25.0%
! TAATAGTATAAAATGCTGGA+GGG - chr5_3:16254356-16254375 None:intergenic 25.0%
! ATAATAGTATAAAATGCTGG+AGG - chr5_3:16254357-16254376 None:intergenic 25.0%
!!! TCCTTTTTGAAGTATTTTAC+AGG + chr5_3:16254467-16254486 Msa0802070:intron 25.0%
! TCCTGTAAAATACTTCAAAA+AGG - chr5_3:16254471-16254490 None:intergenic 25.0%
!!! TTTTTGAAGTATTTTACAGG+AGG + chr5_3:16254470-16254489 Msa0802070:intron 25.0%
!!! ATGTGCTATTCTTTTAAAGA+TGG - chr5_3:16254602-16254621 None:intergenic 25.0%
! AATTGAAGTAGGAAAATACA+CGG + chr5_3:16254809-16254828 Msa0802070:intron 25.0%
! TGGTAATATATTAGCACAAA+TGG - chr5_3:16254910-16254929 None:intergenic 25.0%
! CTAATATATTACCAAACCTT+AGG + chr5_3:16254916-16254935 Msa0802070:intron 25.0%
! TTCATCCAATAATAGTGTTA+TGG + chr5_3:16255191-16255210 Msa0802070:intron 25.0%
! AATCGTTACAGAGAAAAATT+AGG + chr5_3:16255272-16255291 Msa0802070:intron 25.0%
! ATATTCTACCATCTCTATAA+TGG - chr5_3:16255304-16255323 None:intergenic 25.0%
!! AGATGGTAGAATATCTTTTT+AGG + chr5_3:16255310-16255329 Msa0802070:intron 25.0%
!!! AGAATAGTTTTAGCAAGTTA+AGG - chr5_3:16255686-16255705 None:intergenic 25.0%
! AACTAAATAGATGACTGTTT+AGG + chr5_3:16255906-16255925 Msa0802070:intron 25.0%
!!! TTTTTTGTTTAGTGCTACAA+TGG + chr5_3:16256078-16256097 Msa0802070:intron 25.0%
!!! AAGTTCTGAAAGATATTGAT+AGG + chr5_3:16256365-16256384 Msa0802070:CDS 25.0%
!!! AGTTCTGAAAGATATTGATA+GGG + chr5_3:16256366-16256385 Msa0802070:CDS 25.0%
!! TAACAAACTCTGAAAATTTC+AGG + chr5_3:16256666-16256685 Msa0802070:three_prime_UTR 25.0%
! TAGTAGTTAAGACATAAGAA+AGG - chr5_3:16256786-16256805 None:intergenic 25.0%
! TTAAAGTTAGAATCTTTGGA+GGG - chr5_3:16252979-16252998 None:intergenic 25.0%
! AAAAGCTTGATATCTTTAGT+AGG - chr5_3:16253195-16253214 None:intergenic 25.0%
! TTGTATGTGATAAGATAGAT+TGG + chr5_3:16253339-16253358 Msa0802070:intron 25.0%
! ATTGGAAAGATAAGATTAGA+GGG + chr5_3:16253357-16253376 Msa0802070:intron 25.0%
! ATTGGTAAGATAAGCTTAAA+GGG + chr5_3:16253519-16253538 Msa0802070:intron 25.0%
! GAAGATAAGGTTAAACTTAA+AGG + chr5_3:16253584-16253603 Msa0802070:intron 25.0%
! GGTAATGAAATAGACAAAAA+AGG + chr5_3:16253610-16253629 Msa0802070:intron 25.0%
!!! CCTTTTTATGTTAGTTTTGT+GGG + chr5_3:16253643-16253662 Msa0802070:intron 25.0%
!!! CTTTTTATGTTAGTTTTGTG+GGG + chr5_3:16253644-16253663 Msa0802070:intron 25.0%
!!! TTTTTATGTTAGTTTTGTGG+GGG + chr5_3:16253645-16253664 Msa0802070:intron 25.0%
!!! TGCTTCTTTTGATTACATTT+TGG + chr5_3:16253741-16253760 Msa0802070:intron 25.0%
! AAAGGATTGTGTGTTTAATA+TGG + chr5_3:16253881-16253900 Msa0802070:intron 25.0%
! AAGGATTGTGTGTTTAATAT+GGG + chr5_3:16253882-16253901 Msa0802070:intron 25.0%
!!! GGTATTTTTTAGGAGTTTAA+TGG + chr5_3:16253904-16253923 Msa0802070:intron 25.0%
!!! CCGTAGATATTTTTAAATTG+CGG - chr5_3:16254005-16254024 None:intergenic 25.0%
! CCGCAATTTAAAAATATCTA+CGG + chr5_3:16254002-16254021 Msa0802070:intron 25.0%
! TATCAGAATCAATATGAAAC+AGG - chr5_3:16254107-16254126 None:intergenic 25.0%
! ATTCATTAGATTGTTAGTGA+TGG + chr5_3:16254308-16254327 Msa0802070:intron 25.0%
! TAATAGTATAAAATGCTGGA+GGG - chr5_3:16254356-16254375 None:intergenic 25.0%
! ATAATAGTATAAAATGCTGG+AGG - chr5_3:16254357-16254376 None:intergenic 25.0%
!!! TCCTTTTTGAAGTATTTTAC+AGG + chr5_3:16254467-16254486 Msa0802070:intron 25.0%
! TCCTGTAAAATACTTCAAAA+AGG - chr5_3:16254471-16254490 None:intergenic 25.0%
!!! TTTTTGAAGTATTTTACAGG+AGG + chr5_3:16254470-16254489 Msa0802070:intron 25.0%
!!! ATGTGCTATTCTTTTAAAGA+TGG - chr5_3:16254602-16254621 None:intergenic 25.0%
! AATTGAAGTAGGAAAATACA+CGG + chr5_3:16254809-16254828 Msa0802070:intron 25.0%
! TGGTAATATATTAGCACAAA+TGG - chr5_3:16254910-16254929 None:intergenic 25.0%
! CTAATATATTACCAAACCTT+AGG + chr5_3:16254916-16254935 Msa0802070:intron 25.0%
! TTCATCCAATAATAGTGTTA+TGG + chr5_3:16255191-16255210 Msa0802070:intron 25.0%
! AATCGTTACAGAGAAAAATT+AGG + chr5_3:16255272-16255291 Msa0802070:intron 25.0%
! ATATTCTACCATCTCTATAA+TGG - chr5_3:16255304-16255323 None:intergenic 25.0%
!! AGATGGTAGAATATCTTTTT+AGG + chr5_3:16255310-16255329 Msa0802070:intron 25.0%
!!! AGAATAGTTTTAGCAAGTTA+AGG - chr5_3:16255686-16255705 None:intergenic 25.0%
! AACTAAATAGATGACTGTTT+AGG + chr5_3:16255906-16255925 Msa0802070:intron 25.0%
!!! TTTTTTGTTTAGTGCTACAA+TGG + chr5_3:16256078-16256097 Msa0802070:intron 25.0%
!!! AAGTTCTGAAAGATATTGAT+AGG + chr5_3:16256365-16256384 Msa0802070:CDS 25.0%
!!! AGTTCTGAAAGATATTGATA+GGG + chr5_3:16256366-16256385 Msa0802070:CDS 25.0%
!! TAACAAACTCTGAAAATTTC+AGG + chr5_3:16256666-16256685 Msa0802070:three_prime_UTR 25.0%
! TAGTAGTTAAGACATAAGAA+AGG - chr5_3:16256786-16256805 None:intergenic 25.0%
GTTAAAGTTAGAATCTTTGG+AGG - chr5_3:16252980-16252999 None:intergenic 30.0%
GACATTTGAAAAGTGATAGT+GGG - chr5_3:16253018-16253037 None:intergenic 30.0%
AGACATTTGAAAAGTGATAG+TGG - chr5_3:16253019-16253038 None:intergenic 30.0%
AATGTGTAAAATATGTGCCT+TGG + chr5_3:16253284-16253303 Msa0802070:intron 30.0%
TAAAATATGTGCCTTGGAAT+TGG + chr5_3:16253290-16253309 Msa0802070:intron 30.0%
TAAGGGTTTATCAGAATTGT+TGG + chr5_3:16253314-16253333 Msa0802070:intron 30.0%
GATTGGAAAGATAAGATTAG+AGG + chr5_3:16253356-16253375 Msa0802070:intron 30.0%
!! ATTTGCTTTGGAATTGGATA+AGG + chr5_3:16253458-16253477 Msa0802070:intron 30.0%
!! TTTGCTTTGGAATTGGATAA+GGG + chr5_3:16253459-16253478 Msa0802070:intron 30.0%
TAAGGGTTTATGAGAATTGT+TGG + chr5_3:16253476-16253495 Msa0802070:intron 30.0%
GATTGGTAAGATAAGCTTAA+AGG + chr5_3:16253518-16253537 Msa0802070:intron 30.0%
TAAGGTTAAACTTAAAGGGT+TGG + chr5_3:16253589-16253608 Msa0802070:intron 30.0%
!!! GCCTTTTTATGTTAGTTTTG+TGG + chr5_3:16253642-16253661 Msa0802070:intron 30.0%
CCCACAAAACTAACATAAAA+AGG - chr5_3:16253646-16253665 None:intergenic 30.0%
TACTTGAAACTCTGAGTAAA+CGG + chr5_3:16253805-16253824 Msa0802070:intron 30.0%
AGGATTGTGTGTTTAATATG+GGG + chr5_3:16253883-16253902 Msa0802070:intron 30.0%
! GAAACATTATTAGCTCTCAT+TGG - chr5_3:16253962-16253981 None:intergenic 30.0%
TTAAATTGCGGTTACAAAGT+GGG - chr5_3:16253993-16254012 None:intergenic 30.0%
TTTAAATTGCGGTTACAAAG+TGG - chr5_3:16253994-16254013 None:intergenic 30.0%
GTAGAATCAGTTTACATTGA+TGG + chr5_3:16254052-16254071 Msa0802070:intron 30.0%
AAGATTCTCATTTCCTGAAT+TGG - chr5_3:16254413-16254432 None:intergenic 30.0%
TAGATATAAGTTCCCGATAA+GGG - chr5_3:16254506-16254525 None:intergenic 30.0%
! TGGATCACAATACAATCTTT+TGG - chr5_3:16254582-16254601 None:intergenic 30.0%
TCATTATTTATGCAGAGAGA+AGG - chr5_3:16254671-16254690 None:intergenic 30.0%
TGATTTCTCTTATACTCTTG+AGG + chr5_3:16254688-16254707 Msa0802070:intron 30.0%
GATTTCTCTTATACTCTTGA+GGG + chr5_3:16254689-16254708 Msa0802070:intron 30.0%
ATTGAAGTAGGAAAATACAC+GGG + chr5_3:16254810-16254829 Msa0802070:intron 30.0%
! AAATGGATTTGTACTTGCAT+TGG - chr5_3:16254893-16254912 None:intergenic 30.0%
TTTAAGAATGTGTGCTTCAT+AGG - chr5_3:16254958-16254977 None:intergenic 30.0%
ATACATGTCATATACAAGCA+AGG - chr5_3:16254988-16255007 None:intergenic 30.0%
TATGACATGTATTAGACACT+TGG + chr5_3:16254996-16255015 Msa0802070:intron 30.0%
CTCTTACAACACTTATGTTA+TGG + chr5_3:16255019-16255038 Msa0802070:intron 30.0%
TCCAATAATAGTGTTATGGA+TGG + chr5_3:16255195-16255214 Msa0802070:intron 30.0%
ACCATCCATAACACTATTAT+TGG - chr5_3:16255199-16255218 None:intergenic 30.0%
TACTGCGTTTGATTAAAGAT+AGG + chr5_3:16255238-16255257 Msa0802070:intron 30.0%
!! TGGTAGAATATCTTTTTAGG+TGG + chr5_3:16255313-16255332 Msa0802070:intron 30.0%
TGGTTTAAACATGTATAGAG+TGG + chr5_3:16255333-16255352 Msa0802070:intron 30.0%
TAAAGGAGTCAAGATTCAAT+TGG + chr5_3:16255394-16255413 Msa0802070:intron 30.0%
AAAGGAGTCAAGATTCAATT+GGG + chr5_3:16255395-16255414 Msa0802070:intron 30.0%
!!! ATGACTCGATGTTTTTTTCT+TGG + chr5_3:16255451-16255470 Msa0802070:intron 30.0%
CAAAGCAATAATTACTAGCA+TGG - chr5_3:16255740-16255759 None:intergenic 30.0%
CATGCTAGTAATTATTGCTT+TGG + chr5_3:16255738-16255757 Msa0802070:intron 30.0%
!! TCATTCGTGTTGTTTAAGTT+TGG + chr5_3:16255843-16255862 Msa0802070:intron 30.0%
AAATAAGTCAGCTGTGAAAA+AGG - chr5_3:16256049-16256068 None:intergenic 30.0%
GTGGAATATGGAATTATTGA+CGG + chr5_3:16256415-16256434 Msa0802070:CDS 30.0%
TGGAATATGGAATTATTGAC+GGG + chr5_3:16256416-16256435 Msa0802070:CDS 30.0%
! TTTAATGACAGATAGTGGTA+CGG + chr5_3:16256564-16256583 Msa0802070:three_prime_UTR 30.0%
ACTTAAAATTCATCCTCTTG+CGG + chr5_3:16256600-16256619 Msa0802070:three_prime_UTR 30.0%
!!! ACCTTTTTTTGCCTAAAATG+CGG - chr5_3:16256639-16256658 None:intergenic 30.0%
TTTCAAATGTGATCCAGTAA+CGG + chr5_3:16256727-16256746 Msa0802070:three_prime_UTR 30.0%
GTTAAAGTTAGAATCTTTGG+AGG - chr5_3:16252980-16252999 None:intergenic 30.0%
GACATTTGAAAAGTGATAGT+GGG - chr5_3:16253018-16253037 None:intergenic 30.0%
AGACATTTGAAAAGTGATAG+TGG - chr5_3:16253019-16253038 None:intergenic 30.0%
AATGTGTAAAATATGTGCCT+TGG + chr5_3:16253284-16253303 Msa0802070:intron 30.0%
TAAAATATGTGCCTTGGAAT+TGG + chr5_3:16253290-16253309 Msa0802070:intron 30.0%
TAAGGGTTTATCAGAATTGT+TGG + chr5_3:16253314-16253333 Msa0802070:intron 30.0%
GATTGGAAAGATAAGATTAG+AGG + chr5_3:16253356-16253375 Msa0802070:intron 30.0%
!! ATTTGCTTTGGAATTGGATA+AGG + chr5_3:16253458-16253477 Msa0802070:intron 30.0%
!! TTTGCTTTGGAATTGGATAA+GGG + chr5_3:16253459-16253478 Msa0802070:intron 30.0%
TAAGGGTTTATGAGAATTGT+TGG + chr5_3:16253476-16253495 Msa0802070:intron 30.0%
GATTGGTAAGATAAGCTTAA+AGG + chr5_3:16253518-16253537 Msa0802070:intron 30.0%
TAAGGTTAAACTTAAAGGGT+TGG + chr5_3:16253589-16253608 Msa0802070:intron 30.0%
!!! GCCTTTTTATGTTAGTTTTG+TGG + chr5_3:16253642-16253661 Msa0802070:intron 30.0%
CCCACAAAACTAACATAAAA+AGG - chr5_3:16253646-16253665 None:intergenic 30.0%
TACTTGAAACTCTGAGTAAA+CGG + chr5_3:16253805-16253824 Msa0802070:intron 30.0%
AGGATTGTGTGTTTAATATG+GGG + chr5_3:16253883-16253902 Msa0802070:intron 30.0%
! GAAACATTATTAGCTCTCAT+TGG - chr5_3:16253962-16253981 None:intergenic 30.0%
TTAAATTGCGGTTACAAAGT+GGG - chr5_3:16253993-16254012 None:intergenic 30.0%
TTTAAATTGCGGTTACAAAG+TGG - chr5_3:16253994-16254013 None:intergenic 30.0%
GTAGAATCAGTTTACATTGA+TGG + chr5_3:16254052-16254071 Msa0802070:intron 30.0%
AAGATTCTCATTTCCTGAAT+TGG - chr5_3:16254413-16254432 None:intergenic 30.0%
TAGATATAAGTTCCCGATAA+GGG - chr5_3:16254506-16254525 None:intergenic 30.0%
! TGGATCACAATACAATCTTT+TGG - chr5_3:16254582-16254601 None:intergenic 30.0%
TCATTATTTATGCAGAGAGA+AGG - chr5_3:16254671-16254690 None:intergenic 30.0%
TGATTTCTCTTATACTCTTG+AGG + chr5_3:16254688-16254707 Msa0802070:intron 30.0%
GATTTCTCTTATACTCTTGA+GGG + chr5_3:16254689-16254708 Msa0802070:intron 30.0%
ATTGAAGTAGGAAAATACAC+GGG + chr5_3:16254810-16254829 Msa0802070:intron 30.0%
! AAATGGATTTGTACTTGCAT+TGG - chr5_3:16254893-16254912 None:intergenic 30.0%
TTTAAGAATGTGTGCTTCAT+AGG - chr5_3:16254958-16254977 None:intergenic 30.0%
ATACATGTCATATACAAGCA+AGG - chr5_3:16254988-16255007 None:intergenic 30.0%
TATGACATGTATTAGACACT+TGG + chr5_3:16254996-16255015 Msa0802070:intron 30.0%
CTCTTACAACACTTATGTTA+TGG + chr5_3:16255019-16255038 Msa0802070:intron 30.0%
TCCAATAATAGTGTTATGGA+TGG + chr5_3:16255195-16255214 Msa0802070:intron 30.0%
ACCATCCATAACACTATTAT+TGG - chr5_3:16255199-16255218 None:intergenic 30.0%
TACTGCGTTTGATTAAAGAT+AGG + chr5_3:16255238-16255257 Msa0802070:intron 30.0%
!! TGGTAGAATATCTTTTTAGG+TGG + chr5_3:16255313-16255332 Msa0802070:intron 30.0%
TGGTTTAAACATGTATAGAG+TGG + chr5_3:16255333-16255352 Msa0802070:intron 30.0%
TAAAGGAGTCAAGATTCAAT+TGG + chr5_3:16255394-16255413 Msa0802070:intron 30.0%
AAAGGAGTCAAGATTCAATT+GGG + chr5_3:16255395-16255414 Msa0802070:intron 30.0%
!!! ATGACTCGATGTTTTTTTCT+TGG + chr5_3:16255451-16255470 Msa0802070:intron 30.0%
CAAAGCAATAATTACTAGCA+TGG - chr5_3:16255740-16255759 None:intergenic 30.0%
CATGCTAGTAATTATTGCTT+TGG + chr5_3:16255738-16255757 Msa0802070:intron 30.0%
!! TCATTCGTGTTGTTTAAGTT+TGG + chr5_3:16255843-16255862 Msa0802070:intron 30.0%
AAATAAGTCAGCTGTGAAAA+AGG - chr5_3:16256049-16256068 None:intergenic 30.0%
GTGGAATATGGAATTATTGA+CGG + chr5_3:16256415-16256434 Msa0802070:CDS 30.0%
TGGAATATGGAATTATTGAC+GGG + chr5_3:16256416-16256435 Msa0802070:CDS 30.0%
! TTTAATGACAGATAGTGGTA+CGG + chr5_3:16256564-16256583 Msa0802070:three_prime_UTR 30.0%
ACTTAAAATTCATCCTCTTG+CGG + chr5_3:16256600-16256619 Msa0802070:three_prime_UTR 30.0%
!!! ACCTTTTTTTGCCTAAAATG+CGG - chr5_3:16256639-16256658 None:intergenic 30.0%
TTTCAAATGTGATCCAGTAA+CGG + chr5_3:16256727-16256746 Msa0802070:three_prime_UTR 30.0%
!!! AATGGGTGGTTTTGAAAAGA+GGG - chr5_3:16252884-16252903 None:intergenic 35.0%
!!! AAATGGGTGGTTTTGAAAAG+AGG - chr5_3:16252885-16252904 None:intergenic 35.0%
TTAGGGTTGAAAGAGGAAAT+GGG - chr5_3:16252901-16252920 None:intergenic 35.0%
! TTTAGGGTTGAAAGAGGAAA+TGG - chr5_3:16252902-16252921 None:intergenic 35.0%
TTGTGCGAAATTGGGATTTA+GGG - chr5_3:16252918-16252937 None:intergenic 35.0%
GGGGTTAAAGTTAGAATCTT+TGG - chr5_3:16252983-16253002 None:intergenic 35.0%
!!! ATAGTGGGTTTTTGAAGTTG+GGG - chr5_3:16253003-16253022 None:intergenic 35.0%
!!! GATAGTGGGTTTTTGAAGTT+GGG - chr5_3:16253004-16253023 None:intergenic 35.0%
!!! TGATAGTGGGTTTTTGAAGT+TGG - chr5_3:16253005-16253024 None:intergenic 35.0%
!!! TATGAGTCAGTTGTTGCTTT+TGG + chr5_3:16253158-16253177 Msa0802070:CDS 35.0%
! AAGCTTTTTATCAACTCACC+TGG + chr5_3:16253207-16253226 Msa0802070:CDS 35.0%
TAAACCCTTATCCAATTCCA+AGG - chr5_3:16253304-16253323 None:intergenic 35.0%
AAAGGGTTTATGAGAGTTGT+TGG + chr5_3:16253536-16253555 Msa0802070:intron 35.0%
TGGAATTGTATCTCATAAGC+TGG + chr5_3:16253556-16253575 Msa0802070:intron 35.0%
TAAGCTGGATTGTGAAGATA+AGG + chr5_3:16253571-16253590 Msa0802070:intron 35.0%
TAGACAAAAAAGGACCTTTG+TGG + chr5_3:16253620-16253639 Msa0802070:intron 35.0%
CTAACATAAAAAGGCCACAA+AGG - chr5_3:16253637-16253656 None:intergenic 35.0%
GGGAACATAAGAATATGAGA+AGG + chr5_3:16253665-16253684 Msa0802070:intron 35.0%
AACGGACATGTAACGTAAAA+AGG + chr5_3:16253823-16253842 Msa0802070:intron 35.0%
CATGAATAACGAGTTGTGAT+TGG + chr5_3:16253853-16253872 Msa0802070:intron 35.0%
ATAACGAGTTGTGATTGGAT+AGG + chr5_3:16253858-16253877 Msa0802070:intron 35.0%
GTTTAATGGAGATGCATTGT+CGG + chr5_3:16253918-16253937 Msa0802070:intron 35.0%
CTCTCATTGGATGTCTTATA+TGG - chr5_3:16253949-16253968 None:intergenic 35.0%
TGAAACAGGCACAAAAAAGA+GGG - chr5_3:16254093-16254112 None:intergenic 35.0%
ATGAAACAGGCACAAAAAAG+AGG - chr5_3:16254094-16254113 None:intergenic 35.0%
TTCAACGTAATCACTAGTGT+CGG + chr5_3:16254206-16254225 Msa0802070:intron 35.0%
! AGGATATTTTGTCCCCTTAT+CGG + chr5_3:16254490-16254509 Msa0802070:intron 35.0%
AGATATAAGTTCCCGATAAG+GGG - chr5_3:16254505-16254524 None:intergenic 35.0%
GTAGATATAAGTTCCCGATA+AGG - chr5_3:16254507-16254526 None:intergenic 35.0%
TGTGTGTCTTTCATAAGAAG+AGG - chr5_3:16254542-16254561 None:intergenic 35.0%
AAAGACACACACAACATGAA+TGG + chr5_3:16254551-16254570 Msa0802070:intron 35.0%
TTGACTAAGTTACTTGAGAG+CGG + chr5_3:16254621-16254640 Msa0802070:intron 35.0%
TCAGTATTTGTGTTCGTTGT+TGG + chr5_3:16254723-16254742 Msa0802070:intron 35.0%
TTGAAGTAGGAAAATACACG+GGG + chr5_3:16254811-16254830 Msa0802070:intron 35.0%
! GTGTTATGGAAAGAGTATGT+TGG - chr5_3:16255103-16255122 None:intergenic 35.0%
AAATTCAACCCAACAGTAGA+TGG - chr5_3:16255125-16255144 None:intergenic 35.0%
!!! ACTGTTGGGTTGAATTTTAC+AGG + chr5_3:16255128-16255147 Msa0802070:intron 35.0%
!!! CTGTTGGGTTGAATTTTACA+GGG + chr5_3:16255129-16255148 Msa0802070:intron 35.0%
!!! TGTTGGGTTGAATTTTACAG+GGG + chr5_3:16255130-16255149 Msa0802070:intron 35.0%
!! CCAACTGACTCTTTTTGTAT+GGG - chr5_3:16255157-16255176 None:intergenic 35.0%
!! TCCAACTGACTCTTTTTGTA+TGG - chr5_3:16255158-16255177 None:intergenic 35.0%
TGTTATGGATGGTCTAAACA+TGG + chr5_3:16255206-16255225 Msa0802070:intron 35.0%
AATCAAACGCAGTATTTCGT+AGG - chr5_3:16255232-16255251 None:intergenic 35.0%
TAGGACACAGCATATTATGA+TGG - chr5_3:16255625-16255644 None:intergenic 35.0%
GCTAGTAATTATTGCTTTGG+TGG + chr5_3:16255741-16255760 Msa0802070:intron 35.0%
TGCTAATGAATATACCACCA+CGG - chr5_3:16255796-16255815 None:intergenic 35.0%
!! CGTGTTGTTTAAGTTTGGAT+TGG + chr5_3:16255848-16255867 Msa0802070:intron 35.0%
TAATGATCCTCTATGCTGTT+AGG + chr5_3:16255873-16255892 Msa0802070:intron 35.0%
GATGTATCCACAATTGCAAT+GGG + chr5_3:16256133-16256152 Msa0802070:CDS 35.0%
AGAATCATATCTTCCTTCAC+CGG + chr5_3:16256328-16256347 Msa0802070:CDS 35.0%
ATATCTGTCTCCAATTGAAG+CGG + chr5_3:16256393-16256412 Msa0802070:CDS 35.0%
GGAATATGGAATTATTGACG+GGG + chr5_3:16256417-16256436 Msa0802070:CDS 35.0%
GCTAGTATATCTCATCATCT+GGG - chr5_3:16256543-16256562 None:intergenic 35.0%
TAGCCTTTAATGACAGATAG+TGG + chr5_3:16256559-16256578 Msa0802070:exon 35.0%
GTACCACTATCTGTCATTAA+AGG - chr5_3:16256565-16256584 None:intergenic 35.0%
CTTAAAATTCATCCTCTTGC+GGG + chr5_3:16256601-16256620 Msa0802070:three_prime_UTR 35.0%
TTAAAATTCATCCTCTTGCG+GGG + chr5_3:16256602-16256621 Msa0802070:three_prime_UTR 35.0%
! ACCGCATTTTAGGCAAAAAA+AGG + chr5_3:16256635-16256654 Msa0802070:three_prime_UTR 35.0%
AAAGACAAATAAAACTGCCG+CGG - chr5_3:16256710-16256729 None:intergenic 35.0%
TCAACAAATTTCTCCGTTAC+TGG - chr5_3:16256743-16256762 None:intergenic 35.0%
!!! AATGGGTGGTTTTGAAAAGA+GGG - chr5_3:16252884-16252903 None:intergenic 35.0%
!!! AAATGGGTGGTTTTGAAAAG+AGG - chr5_3:16252885-16252904 None:intergenic 35.0%
TTAGGGTTGAAAGAGGAAAT+GGG - chr5_3:16252901-16252920 None:intergenic 35.0%
! TTTAGGGTTGAAAGAGGAAA+TGG - chr5_3:16252902-16252921 None:intergenic 35.0%
TTGTGCGAAATTGGGATTTA+GGG - chr5_3:16252918-16252937 None:intergenic 35.0%
GGGGTTAAAGTTAGAATCTT+TGG - chr5_3:16252983-16253002 None:intergenic 35.0%
!!! ATAGTGGGTTTTTGAAGTTG+GGG - chr5_3:16253003-16253022 None:intergenic 35.0%
!!! GATAGTGGGTTTTTGAAGTT+GGG - chr5_3:16253004-16253023 None:intergenic 35.0%
!!! TGATAGTGGGTTTTTGAAGT+TGG - chr5_3:16253005-16253024 None:intergenic 35.0%
!!! TATGAGTCAGTTGTTGCTTT+TGG + chr5_3:16253158-16253177 Msa0802070:CDS 35.0%
! AAGCTTTTTATCAACTCACC+TGG + chr5_3:16253207-16253226 Msa0802070:CDS 35.0%
TAAACCCTTATCCAATTCCA+AGG - chr5_3:16253304-16253323 None:intergenic 35.0%
AAAGGGTTTATGAGAGTTGT+TGG + chr5_3:16253536-16253555 Msa0802070:intron 35.0%
TGGAATTGTATCTCATAAGC+TGG + chr5_3:16253556-16253575 Msa0802070:intron 35.0%
TAAGCTGGATTGTGAAGATA+AGG + chr5_3:16253571-16253590 Msa0802070:intron 35.0%
TAGACAAAAAAGGACCTTTG+TGG + chr5_3:16253620-16253639 Msa0802070:intron 35.0%
CTAACATAAAAAGGCCACAA+AGG - chr5_3:16253637-16253656 None:intergenic 35.0%
GGGAACATAAGAATATGAGA+AGG + chr5_3:16253665-16253684 Msa0802070:intron 35.0%
AACGGACATGTAACGTAAAA+AGG + chr5_3:16253823-16253842 Msa0802070:intron 35.0%
CATGAATAACGAGTTGTGAT+TGG + chr5_3:16253853-16253872 Msa0802070:intron 35.0%
ATAACGAGTTGTGATTGGAT+AGG + chr5_3:16253858-16253877 Msa0802070:intron 35.0%
GTTTAATGGAGATGCATTGT+CGG + chr5_3:16253918-16253937 Msa0802070:intron 35.0%
CTCTCATTGGATGTCTTATA+TGG - chr5_3:16253949-16253968 None:intergenic 35.0%
TGAAACAGGCACAAAAAAGA+GGG - chr5_3:16254093-16254112 None:intergenic 35.0%
ATGAAACAGGCACAAAAAAG+AGG - chr5_3:16254094-16254113 None:intergenic 35.0%
TTCAACGTAATCACTAGTGT+CGG + chr5_3:16254206-16254225 Msa0802070:intron 35.0%
! AGGATATTTTGTCCCCTTAT+CGG + chr5_3:16254490-16254509 Msa0802070:intron 35.0%
AGATATAAGTTCCCGATAAG+GGG - chr5_3:16254505-16254524 None:intergenic 35.0%
GTAGATATAAGTTCCCGATA+AGG - chr5_3:16254507-16254526 None:intergenic 35.0%
TGTGTGTCTTTCATAAGAAG+AGG - chr5_3:16254542-16254561 None:intergenic 35.0%
AAAGACACACACAACATGAA+TGG + chr5_3:16254551-16254570 Msa0802070:intron 35.0%
TTGACTAAGTTACTTGAGAG+CGG + chr5_3:16254621-16254640 Msa0802070:intron 35.0%
TCAGTATTTGTGTTCGTTGT+TGG + chr5_3:16254723-16254742 Msa0802070:intron 35.0%
TTGAAGTAGGAAAATACACG+GGG + chr5_3:16254811-16254830 Msa0802070:intron 35.0%
! GTGTTATGGAAAGAGTATGT+TGG - chr5_3:16255103-16255122 None:intergenic 35.0%
AAATTCAACCCAACAGTAGA+TGG - chr5_3:16255125-16255144 None:intergenic 35.0%
!!! ACTGTTGGGTTGAATTTTAC+AGG + chr5_3:16255128-16255147 Msa0802070:intron 35.0%
!!! CTGTTGGGTTGAATTTTACA+GGG + chr5_3:16255129-16255148 Msa0802070:intron 35.0%
!!! TGTTGGGTTGAATTTTACAG+GGG + chr5_3:16255130-16255149 Msa0802070:intron 35.0%
!! CCAACTGACTCTTTTTGTAT+GGG - chr5_3:16255157-16255176 None:intergenic 35.0%
!! TCCAACTGACTCTTTTTGTA+TGG - chr5_3:16255158-16255177 None:intergenic 35.0%
TGTTATGGATGGTCTAAACA+TGG + chr5_3:16255206-16255225 Msa0802070:intron 35.0%
AATCAAACGCAGTATTTCGT+AGG - chr5_3:16255232-16255251 None:intergenic 35.0%
TAGGACACAGCATATTATGA+TGG - chr5_3:16255625-16255644 None:intergenic 35.0%
GCTAGTAATTATTGCTTTGG+TGG + chr5_3:16255741-16255760 Msa0802070:intron 35.0%
TGCTAATGAATATACCACCA+CGG - chr5_3:16255796-16255815 None:intergenic 35.0%
!! CGTGTTGTTTAAGTTTGGAT+TGG + chr5_3:16255848-16255867 Msa0802070:intron 35.0%
TAATGATCCTCTATGCTGTT+AGG + chr5_3:16255873-16255892 Msa0802070:intron 35.0%
GATGTATCCACAATTGCAAT+GGG + chr5_3:16256133-16256152 Msa0802070:CDS 35.0%
AGAATCATATCTTCCTTCAC+CGG + chr5_3:16256328-16256347 Msa0802070:CDS 35.0%
ATATCTGTCTCCAATTGAAG+CGG + chr5_3:16256393-16256412 Msa0802070:CDS 35.0%
GGAATATGGAATTATTGACG+GGG + chr5_3:16256417-16256436 Msa0802070:CDS 35.0%
GCTAGTATATCTCATCATCT+GGG - chr5_3:16256543-16256562 None:intergenic 35.0%
TAGCCTTTAATGACAGATAG+TGG + chr5_3:16256559-16256578 Msa0802070:exon 35.0%
GTACCACTATCTGTCATTAA+AGG - chr5_3:16256565-16256584 None:intergenic 35.0%
CTTAAAATTCATCCTCTTGC+GGG + chr5_3:16256601-16256620 Msa0802070:three_prime_UTR 35.0%
TTAAAATTCATCCTCTTGCG+GGG + chr5_3:16256602-16256621 Msa0802070:three_prime_UTR 35.0%
! ACCGCATTTTAGGCAAAAAA+AGG + chr5_3:16256635-16256654 Msa0802070:three_prime_UTR 35.0%
AAAGACAAATAAAACTGCCG+CGG - chr5_3:16256710-16256729 None:intergenic 35.0%
TCAACAAATTTCTCCGTTAC+TGG - chr5_3:16256743-16256762 None:intergenic 35.0%
AGTTGAAGGATGAGAAAGAG+AGG - chr5_3:16252830-16252849 None:intergenic 40.0%
! TTGGGATTTAGGGTTGAAAG+AGG - chr5_3:16252908-16252927 None:intergenic 40.0%
GTTGTGCGAAATTGGGATTT+AGG - chr5_3:16252919-16252938 None:intergenic 40.0%
GATTGGAGTTGTGCGAAATT+GGG - chr5_3:16252926-16252945 None:intergenic 40.0%
TGATTGGAGTTGTGCGAAAT+TGG - chr5_3:16252927-16252946 None:intergenic 40.0%
!!! TTTGGAGGGTTTTGTTGATG+GGG - chr5_3:16252965-16252984 None:intergenic 40.0%
!!! CTTTGGAGGGTTTTGTTGAT+GGG - chr5_3:16252966-16252985 None:intergenic 40.0%
!!! TCTTTGGAGGGTTTTGTTGA+TGG - chr5_3:16252967-16252986 None:intergenic 40.0%
!!! TAGTGGGTTTTTGAAGTTGG+GGG - chr5_3:16253002-16253021 None:intergenic 40.0%
! CTTTTTATCAACTCACCTGG+TGG + chr5_3:16253210-16253229 Msa0802070:CDS 40.0%
ATGTGCCTTGGAATTGGATA+AGG + chr5_3:16253296-16253315 Msa0802070:intron 40.0%
TGTGCCTTGGAATTGGATAA+GGG + chr5_3:16253297-16253316 Msa0802070:intron 40.0%
TGTTGGAACTGTATGTAGTC+AGG + chr5_3:16253493-16253512 Msa0802070:intron 40.0%
!! AGGATAACTGTGACCGATTT+TGG + chr5_3:16253685-16253704 Msa0802070:intron 40.0%
!! GGATAACTGTGACCGATTTT+GGG + chr5_3:16253686-16253705 Msa0802070:intron 40.0%
!! GATAACTGTGACCGATTTTG+GGG + chr5_3:16253687-16253706 Msa0802070:intron 40.0%
!! ATAACTGTGACCGATTTTGG+GGG + chr5_3:16253688-16253707 Msa0802070:intron 40.0%
GAGTTGTGATTGGATAGGAA+AGG + chr5_3:16253863-16253882 Msa0802070:intron 40.0%
ATGTTGCACCAACACTTTGA+AGG - chr5_3:16254267-16254286 None:intergenic 40.0%
TTTCGCATGTTGACCAATTC+AGG + chr5_3:16254397-16254416 Msa0802070:intron 40.0%
! GGATATTTTGTCCCCTTATC+GGG + chr5_3:16254491-16254510 Msa0802070:intron 40.0%
TGACTAAGTTACTTGAGAGC+GGG + chr5_3:16254622-16254641 Msa0802070:intron 40.0%
TGAAGTAGGAAAATACACGG+GGG + chr5_3:16254812-16254831 Msa0802070:intron 40.0%
GCTTCATAGGTGCAAATGTA+TGG - chr5_3:16254945-16254964 None:intergenic 40.0%
TCCATAACACCATCTACTGT+TGG + chr5_3:16255113-16255132 Msa0802070:intron 40.0%
CCATAACACCATCTACTGTT+GGG + chr5_3:16255114-16255133 Msa0802070:intron 40.0%
CCCATACAAAAAGAGTCAGT+TGG + chr5_3:16255154-16255173 Msa0802070:intron 40.0%
GGTAGCTTCCATTATAGAGA+TGG + chr5_3:16255293-16255312 Msa0802070:intron 40.0%
ATTGTGCATGAACACAGCAT+AGG - chr5_3:16255644-16255663 None:intergenic 40.0%
TTACTAGCATGGTGACTAGA+TGG - chr5_3:16255729-16255748 None:intergenic 40.0%
GCTAATGAATATACCACCAC+GGG - chr5_3:16255795-16255814 None:intergenic 40.0%
ATGAGAAGACAGGAGGAAAA+TGG - chr5_3:16255827-16255846 None:intergenic 40.0%
AACAACACGAATGAGAAGAC+AGG - chr5_3:16255837-16255856 None:intergenic 40.0%
! GATGACTGTTTAGGTTTGCT+TGG + chr5_3:16255915-16255934 Msa0802070:intron 40.0%
CAGCTGTGAAAAAGGATGTA+AGG - chr5_3:16256041-16256060 None:intergenic 40.0%
GGATGTATCCACAATTGCAA+TGG + chr5_3:16256132-16256151 Msa0802070:CDS 40.0%
TCAACAGCCTCAATTATCCT+AGG + chr5_3:16256166-16256185 Msa0802070:CDS 40.0%
GCAATCATGATTCGCGTATT+GGG - chr5_3:16256223-16256242 None:intergenic 40.0%
AGCAATCATGATTCGCGTAT+TGG - chr5_3:16256224-16256243 None:intergenic 40.0%
GGTGAAGGAAGATATGATTC+TGG - chr5_3:16256329-16256348 None:intergenic 40.0%
! TCAGAACTTGTTCAAGTGAG+CGG - chr5_3:16256354-16256373 None:intergenic 40.0%
AACACTAAACACCGATGATG+CGG + chr5_3:16256498-16256517 Msa0802070:CDS 40.0%
! TCTCATCATCTGGGATATGT+GGG - chr5_3:16256534-16256553 None:intergenic 40.0%
! ATCTCATCATCTGGGATATG+TGG - chr5_3:16256535-16256554 None:intergenic 40.0%
GGCTAGTATATCTCATCATC+TGG - chr5_3:16256544-16256563 None:intergenic 40.0%
! CTTGTGGTATACCGCATTTT+AGG + chr5_3:16256625-16256644 Msa0802070:three_prime_UTR 40.0%
ATTTCAGGCTTATTGCGTGT+AGG + chr5_3:16256681-16256700 Msa0802070:three_prime_UTR 40.0%
AGTTGAAGGATGAGAAAGAG+AGG - chr5_3:16252830-16252849 None:intergenic 40.0%
! TTGGGATTTAGGGTTGAAAG+AGG - chr5_3:16252908-16252927 None:intergenic 40.0%
GTTGTGCGAAATTGGGATTT+AGG - chr5_3:16252919-16252938 None:intergenic 40.0%
GATTGGAGTTGTGCGAAATT+GGG - chr5_3:16252926-16252945 None:intergenic 40.0%
TGATTGGAGTTGTGCGAAAT+TGG - chr5_3:16252927-16252946 None:intergenic 40.0%
!!! TTTGGAGGGTTTTGTTGATG+GGG - chr5_3:16252965-16252984 None:intergenic 40.0%
!!! CTTTGGAGGGTTTTGTTGAT+GGG - chr5_3:16252966-16252985 None:intergenic 40.0%
!!! TCTTTGGAGGGTTTTGTTGA+TGG - chr5_3:16252967-16252986 None:intergenic 40.0%
!!! TAGTGGGTTTTTGAAGTTGG+GGG - chr5_3:16253002-16253021 None:intergenic 40.0%
! CTTTTTATCAACTCACCTGG+TGG + chr5_3:16253210-16253229 Msa0802070:CDS 40.0%
ATGTGCCTTGGAATTGGATA+AGG + chr5_3:16253296-16253315 Msa0802070:intron 40.0%
TGTGCCTTGGAATTGGATAA+GGG + chr5_3:16253297-16253316 Msa0802070:intron 40.0%
TGTTGGAACTGTATGTAGTC+AGG + chr5_3:16253493-16253512 Msa0802070:intron 40.0%
!! AGGATAACTGTGACCGATTT+TGG + chr5_3:16253685-16253704 Msa0802070:intron 40.0%
!! GGATAACTGTGACCGATTTT+GGG + chr5_3:16253686-16253705 Msa0802070:intron 40.0%
!! GATAACTGTGACCGATTTTG+GGG + chr5_3:16253687-16253706 Msa0802070:intron 40.0%
!! ATAACTGTGACCGATTTTGG+GGG + chr5_3:16253688-16253707 Msa0802070:intron 40.0%
GAGTTGTGATTGGATAGGAA+AGG + chr5_3:16253863-16253882 Msa0802070:intron 40.0%
ATGTTGCACCAACACTTTGA+AGG - chr5_3:16254267-16254286 None:intergenic 40.0%
TTTCGCATGTTGACCAATTC+AGG + chr5_3:16254397-16254416 Msa0802070:intron 40.0%
! GGATATTTTGTCCCCTTATC+GGG + chr5_3:16254491-16254510 Msa0802070:intron 40.0%
TGACTAAGTTACTTGAGAGC+GGG + chr5_3:16254622-16254641 Msa0802070:intron 40.0%
TGAAGTAGGAAAATACACGG+GGG + chr5_3:16254812-16254831 Msa0802070:intron 40.0%
GCTTCATAGGTGCAAATGTA+TGG - chr5_3:16254945-16254964 None:intergenic 40.0%
TCCATAACACCATCTACTGT+TGG + chr5_3:16255113-16255132 Msa0802070:intron 40.0%
CCATAACACCATCTACTGTT+GGG + chr5_3:16255114-16255133 Msa0802070:intron 40.0%
CCCATACAAAAAGAGTCAGT+TGG + chr5_3:16255154-16255173 Msa0802070:intron 40.0%
GGTAGCTTCCATTATAGAGA+TGG + chr5_3:16255293-16255312 Msa0802070:intron 40.0%
ATTGTGCATGAACACAGCAT+AGG - chr5_3:16255644-16255663 None:intergenic 40.0%
TTACTAGCATGGTGACTAGA+TGG - chr5_3:16255729-16255748 None:intergenic 40.0%
GCTAATGAATATACCACCAC+GGG - chr5_3:16255795-16255814 None:intergenic 40.0%
ATGAGAAGACAGGAGGAAAA+TGG - chr5_3:16255827-16255846 None:intergenic 40.0%
AACAACACGAATGAGAAGAC+AGG - chr5_3:16255837-16255856 None:intergenic 40.0%
! GATGACTGTTTAGGTTTGCT+TGG + chr5_3:16255915-16255934 Msa0802070:intron 40.0%
CAGCTGTGAAAAAGGATGTA+AGG - chr5_3:16256041-16256060 None:intergenic 40.0%
GGATGTATCCACAATTGCAA+TGG + chr5_3:16256132-16256151 Msa0802070:CDS 40.0%
TCAACAGCCTCAATTATCCT+AGG + chr5_3:16256166-16256185 Msa0802070:CDS 40.0%
GCAATCATGATTCGCGTATT+GGG - chr5_3:16256223-16256242 None:intergenic 40.0%
AGCAATCATGATTCGCGTAT+TGG - chr5_3:16256224-16256243 None:intergenic 40.0%
GGTGAAGGAAGATATGATTC+TGG - chr5_3:16256329-16256348 None:intergenic 40.0%
! TCAGAACTTGTTCAAGTGAG+CGG - chr5_3:16256354-16256373 None:intergenic 40.0%
AACACTAAACACCGATGATG+CGG + chr5_3:16256498-16256517 Msa0802070:CDS 40.0%
! TCTCATCATCTGGGATATGT+GGG - chr5_3:16256534-16256553 None:intergenic 40.0%
! ATCTCATCATCTGGGATATG+TGG - chr5_3:16256535-16256554 None:intergenic 40.0%
GGCTAGTATATCTCATCATC+TGG - chr5_3:16256544-16256563 None:intergenic 40.0%
! CTTGTGGTATACCGCATTTT+AGG + chr5_3:16256625-16256644 Msa0802070:three_prime_UTR 40.0%
ATTTCAGGCTTATTGCGTGT+AGG + chr5_3:16256681-16256700 Msa0802070:three_prime_UTR 40.0%
CGGGAGATTGTGAGAGAAAT+GGG - chr5_3:16252789-16252808 None:intergenic 45.0%
GTTGTGAGGAAATCCATTGC+GGG - chr5_3:16252808-16252827 None:intergenic 45.0%
GGTTGTGAGGAAATCCATTG+CGG - chr5_3:16252809-16252828 None:intergenic 45.0%
GATGAGAAAGAGAGGTTGTG+AGG - chr5_3:16252822-16252841 None:intergenic 45.0%
AGAGATGGAAGGGAAGTTGA+AGG - chr5_3:16252844-16252863 None:intergenic 45.0%
!!! GGTGGTTTTGAAAAGAGGGT+GGG - chr5_3:16252880-16252899 None:intergenic 45.0%
!! GTTTTGTTGATGGGGTTGTG+AGG - chr5_3:16252957-16252976 None:intergenic 45.0%
!! AGGTGCTGAATCTGATACCA+TGG + chr5_3:16253068-16253087 Msa0802070:CDS 45.0%
! GGTGCTGAATCTGATACCAT+GGG + chr5_3:16253069-16253088 Msa0802070:CDS 45.0%
GTGCTGAATCTGATACCATG+GGG + chr5_3:16253070-16253089 Msa0802070:CDS 45.0%
! ATACCATGGGGTTGTTGTTG+AGG + chr5_3:16253082-16253101 Msa0802070:CDS 45.0%
! TACCATGGGGTTGTTGTTGA+GGG + chr5_3:16253083-16253102 Msa0802070:CDS 45.0%
AGGGAGAGGATTGTGTTCTT+GGG + chr5_3:16253102-16253121 Msa0802070:CDS 45.0%
TATAACCTGAGAGAACCACC+AGG - chr5_3:16253228-16253247 None:intergenic 45.0%
TGGAACTGTATGTAGTCAGG+TGG + chr5_3:16253496-16253515 Msa0802070:intron 45.0%
CTGTATGTAGTCAGGTGGAT+TGG + chr5_3:16253501-16253520 Msa0802070:intron 45.0%
GATCTATGAAGCACAGACAC+CGG + chr5_3:16254136-16254155 Msa0802070:intron 45.0%
GATGTTGACGTGTTTGTGTC+CGG - chr5_3:16254158-16254177 None:intergenic 45.0%
ATGTATGGCTGCCTAAGGTT+TGG - chr5_3:16254930-16254949 None:intergenic 45.0%
TGCAAATGTATGGCTGCCTA+AGG - chr5_3:16254935-16254954 None:intergenic 45.0%
! CCCAACAGTAGATGGTGTTA+TGG - chr5_3:16255117-16255136 None:intergenic 45.0%
TGTGCACAATGCACACACAT+GGG - chr5_3:16255539-16255558 None:intergenic 45.0%
ATGAATATACCACCACGGGA+GGG - chr5_3:16255791-16255810 None:intergenic 45.0%
AATGAATATACCACCACGGG+AGG - chr5_3:16255792-16255811 None:intergenic 45.0%
ACAGGAGGAAAATGGCTGTA+CGG - chr5_3:16255819-16255838 None:intergenic 45.0%
AACACGAATGAGAAGACAGG+AGG - chr5_3:16255834-16255853 None:intergenic 45.0%
TGCAATGCCCATTGCAATTG+TGG - chr5_3:16256143-16256162 None:intergenic 45.0%
ACAGCCTCAATTATCCTAGG+TGG + chr5_3:16256169-16256188 Msa0802070:CDS 45.0%
ATCATGATTGCTCAACCACC+TGG + chr5_3:16256232-16256251 Msa0802070:CDS 45.0%
CCATATTCCACCGCTTCAAT+TGG - chr5_3:16256406-16256425 None:intergenic 45.0%
CCAATTGAAGCGGTGGAATA+TGG + chr5_3:16256403-16256422 Msa0802070:CDS 45.0%
! GTTGCTTCTTCCACCTTTTC+TGG - chr5_3:16256481-16256500 None:intergenic 45.0%
GGTTAGGAAATCCGCATCAT+CGG - chr5_3:16256512-16256531 None:intergenic 45.0%
! CTCATCATCTGGGATATGTG+GGG - chr5_3:16256533-16256552 None:intergenic 45.0%
CGGGAGATTGTGAGAGAAAT+GGG - chr5_3:16252789-16252808 None:intergenic 45.0%
GTTGTGAGGAAATCCATTGC+GGG - chr5_3:16252808-16252827 None:intergenic 45.0%
GGTTGTGAGGAAATCCATTG+CGG - chr5_3:16252809-16252828 None:intergenic 45.0%
GATGAGAAAGAGAGGTTGTG+AGG - chr5_3:16252822-16252841 None:intergenic 45.0%
AGAGATGGAAGGGAAGTTGA+AGG - chr5_3:16252844-16252863 None:intergenic 45.0%
!!! GGTGGTTTTGAAAAGAGGGT+GGG - chr5_3:16252880-16252899 None:intergenic 45.0%
!! GTTTTGTTGATGGGGTTGTG+AGG - chr5_3:16252957-16252976 None:intergenic 45.0%
!! AGGTGCTGAATCTGATACCA+TGG + chr5_3:16253068-16253087 Msa0802070:CDS 45.0%
! GGTGCTGAATCTGATACCAT+GGG + chr5_3:16253069-16253088 Msa0802070:CDS 45.0%
GTGCTGAATCTGATACCATG+GGG + chr5_3:16253070-16253089 Msa0802070:CDS 45.0%
! ATACCATGGGGTTGTTGTTG+AGG + chr5_3:16253082-16253101 Msa0802070:CDS 45.0%
! TACCATGGGGTTGTTGTTGA+GGG + chr5_3:16253083-16253102 Msa0802070:CDS 45.0%
AGGGAGAGGATTGTGTTCTT+GGG + chr5_3:16253102-16253121 Msa0802070:CDS 45.0%
TATAACCTGAGAGAACCACC+AGG - chr5_3:16253228-16253247 None:intergenic 45.0%
TGGAACTGTATGTAGTCAGG+TGG + chr5_3:16253496-16253515 Msa0802070:intron 45.0%
CTGTATGTAGTCAGGTGGAT+TGG + chr5_3:16253501-16253520 Msa0802070:intron 45.0%
GATCTATGAAGCACAGACAC+CGG + chr5_3:16254136-16254155 Msa0802070:intron 45.0%
GATGTTGACGTGTTTGTGTC+CGG - chr5_3:16254158-16254177 None:intergenic 45.0%
ATGTATGGCTGCCTAAGGTT+TGG - chr5_3:16254930-16254949 None:intergenic 45.0%
TGCAAATGTATGGCTGCCTA+AGG - chr5_3:16254935-16254954 None:intergenic 45.0%
! CCCAACAGTAGATGGTGTTA+TGG - chr5_3:16255117-16255136 None:intergenic 45.0%
TGTGCACAATGCACACACAT+GGG - chr5_3:16255539-16255558 None:intergenic 45.0%
ATGAATATACCACCACGGGA+GGG - chr5_3:16255791-16255810 None:intergenic 45.0%
AATGAATATACCACCACGGG+AGG - chr5_3:16255792-16255811 None:intergenic 45.0%
ACAGGAGGAAAATGGCTGTA+CGG - chr5_3:16255819-16255838 None:intergenic 45.0%
AACACGAATGAGAAGACAGG+AGG - chr5_3:16255834-16255853 None:intergenic 45.0%
TGCAATGCCCATTGCAATTG+TGG - chr5_3:16256143-16256162 None:intergenic 45.0%
ACAGCCTCAATTATCCTAGG+TGG + chr5_3:16256169-16256188 Msa0802070:CDS 45.0%
ATCATGATTGCTCAACCACC+TGG + chr5_3:16256232-16256251 Msa0802070:CDS 45.0%
CCATATTCCACCGCTTCAAT+TGG - chr5_3:16256406-16256425 None:intergenic 45.0%
CCAATTGAAGCGGTGGAATA+TGG + chr5_3:16256403-16256422 Msa0802070:CDS 45.0%
! GTTGCTTCTTCCACCTTTTC+TGG - chr5_3:16256481-16256500 None:intergenic 45.0%
GGTTAGGAAATCCGCATCAT+CGG - chr5_3:16256512-16256531 None:intergenic 45.0%
! CTCATCATCTGGGATATGTG+GGG - chr5_3:16256533-16256552 None:intergenic 45.0%
GCGGGAGATTGTGAGAGAAA+TGG - chr5_3:16252790-16252809 None:intergenic 50.0%
TCTCTCACAATCTCCCGCAA+TGG + chr5_3:16252792-16252811 Msa0802070:exon 50.0%
GCGTTGTGAGAGAGATGGAA+GGG - chr5_3:16252854-16252873 None:intergenic 50.0%
TGCGTTGTGAGAGAGATGGA+AGG - chr5_3:16252855-16252874 None:intergenic 50.0%
GGAATGCGTTGTGAGAGAGA+TGG - chr5_3:16252859-16252878 None:intergenic 50.0%
!!! GGGTGGTTTTGAAAAGAGGG+TGG - chr5_3:16252881-16252900 None:intergenic 50.0%
GGGTTGAAAGAGGAAATGGG+TGG - chr5_3:16252898-16252917 None:intergenic 50.0%
GTTGTGAGGACGCAGTTGAT+TGG - chr5_3:16252943-16252962 None:intergenic 50.0%
GAGGGAGAGGATTGTGTTCT+TGG + chr5_3:16253101-16253120 Msa0802070:CDS 50.0%
AACCAAGCCACCCCCAAAAT+CGG - chr5_3:16253701-16253720 None:intergenic 50.0%
!! GTAATCACTAGTGTCGGTGC+TGG + chr5_3:16254212-16254231 Msa0802070:intron 50.0%
ACACGACACATGTCGAACAC+CGG + chr5_3:16254235-16254254 Msa0802070:intron 50.0%
! AACACTTTGAAGGCGTGTCC+CGG - chr5_3:16254257-16254276 None:intergenic 50.0%
GTGTGCACAATGCACACACA+TGG - chr5_3:16255540-16255559 None:intergenic 50.0%
TGAATATACCACCACGGGAG+GGG - chr5_3:16255790-16255809 None:intergenic 50.0%
CTAGCTGCCTAACAGCATAG+AGG - chr5_3:16255883-16255902 None:intergenic 50.0%
CTCTATGCTGTTAGGCAGCT+AGG + chr5_3:16255881-16255900 Msa0802070:intron 50.0%
GCTTGGAGTCATGTGTCTGA+TGG + chr5_3:16255932-16255951 Msa0802070:intron 50.0%
! ACGATGCAGTGCAGCTTGTT+AGG + chr5_3:16256107-16256126 Msa0802070:CDS 50.0%
!! CGATGCAGTGCAGCTTGTTA+GGG + chr5_3:16256108-16256127 Msa0802070:CDS 50.0%
GCCTCAATTATCCTAGGTGG+TGG + chr5_3:16256172-16256191 Msa0802070:CDS 50.0%
GCCACCACCTAGGATAATTG+AGG - chr5_3:16256176-16256195 None:intergenic 50.0%
CATAGCTAGCCGCTTACCTT+TGG - chr5_3:16256200-16256219 None:intergenic 50.0%
ATGATTGCTCAACCACCTGG+AGG + chr5_3:16256235-16256254 Msa0802070:CDS 50.0%
! AACTTGTTCAAGTGAGCGGC+CGG - chr5_3:16256350-16256369 None:intergenic 50.0%
TCTGTCTCCAATTGAAGCGG+TGG + chr5_3:16256396-16256415 Msa0802070:CDS 50.0%
!! TCTTCCACCTTTTCTGGCAC+TGG - chr5_3:16256475-16256494 None:intergenic 50.0%
! CATCTGGGATATGTGGGGTT+AGG - chr5_3:16256528-16256547 None:intergenic 50.0%
TTATTGCGTGTAGGATGCCG+CGG + chr5_3:16256690-16256709 Msa0802070:three_prime_UTR 50.0%
GCGGGAGATTGTGAGAGAAA+TGG - chr5_3:16252790-16252809 None:intergenic 50.0%
TCTCTCACAATCTCCCGCAA+TGG + chr5_3:16252792-16252811 Msa0802070:exon 50.0%
GCGTTGTGAGAGAGATGGAA+GGG - chr5_3:16252854-16252873 None:intergenic 50.0%
TGCGTTGTGAGAGAGATGGA+AGG - chr5_3:16252855-16252874 None:intergenic 50.0%
GGAATGCGTTGTGAGAGAGA+TGG - chr5_3:16252859-16252878 None:intergenic 50.0%
!!! GGGTGGTTTTGAAAAGAGGG+TGG - chr5_3:16252881-16252900 None:intergenic 50.0%
GGGTTGAAAGAGGAAATGGG+TGG - chr5_3:16252898-16252917 None:intergenic 50.0%
GTTGTGAGGACGCAGTTGAT+TGG - chr5_3:16252943-16252962 None:intergenic 50.0%
GAGGGAGAGGATTGTGTTCT+TGG + chr5_3:16253101-16253120 Msa0802070:CDS 50.0%
AACCAAGCCACCCCCAAAAT+CGG - chr5_3:16253701-16253720 None:intergenic 50.0%
!! GTAATCACTAGTGTCGGTGC+TGG + chr5_3:16254212-16254231 Msa0802070:intron 50.0%
ACACGACACATGTCGAACAC+CGG + chr5_3:16254235-16254254 Msa0802070:intron 50.0%
! AACACTTTGAAGGCGTGTCC+CGG - chr5_3:16254257-16254276 None:intergenic 50.0%
GTGTGCACAATGCACACACA+TGG - chr5_3:16255540-16255559 None:intergenic 50.0%
TGAATATACCACCACGGGAG+GGG - chr5_3:16255790-16255809 None:intergenic 50.0%
CTAGCTGCCTAACAGCATAG+AGG - chr5_3:16255883-16255902 None:intergenic 50.0%
CTCTATGCTGTTAGGCAGCT+AGG + chr5_3:16255881-16255900 Msa0802070:intron 50.0%
GCTTGGAGTCATGTGTCTGA+TGG + chr5_3:16255932-16255951 Msa0802070:intron 50.0%
! ACGATGCAGTGCAGCTTGTT+AGG + chr5_3:16256107-16256126 Msa0802070:CDS 50.0%
!! CGATGCAGTGCAGCTTGTTA+GGG + chr5_3:16256108-16256127 Msa0802070:CDS 50.0%
GCCTCAATTATCCTAGGTGG+TGG + chr5_3:16256172-16256191 Msa0802070:CDS 50.0%
GCCACCACCTAGGATAATTG+AGG - chr5_3:16256176-16256195 None:intergenic 50.0%
CATAGCTAGCCGCTTACCTT+TGG - chr5_3:16256200-16256219 None:intergenic 50.0%
ATGATTGCTCAACCACCTGG+AGG + chr5_3:16256235-16256254 Msa0802070:CDS 50.0%
! AACTTGTTCAAGTGAGCGGC+CGG - chr5_3:16256350-16256369 None:intergenic 50.0%
TCTGTCTCCAATTGAAGCGG+TGG + chr5_3:16256396-16256415 Msa0802070:CDS 50.0%
!! TCTTCCACCTTTTCTGGCAC+TGG - chr5_3:16256475-16256494 None:intergenic 50.0%
! CATCTGGGATATGTGGGGTT+AGG - chr5_3:16256528-16256547 None:intergenic 50.0%
TTATTGCGTGTAGGATGCCG+CGG + chr5_3:16256690-16256709 Msa0802070:three_prime_UTR 50.0%
CTCCCTCAACAACAACCCCA+TGG - chr5_3:16253088-16253107 None:intergenic 55.0%
! TGGGGTTGTTGTTGAGGGAG+AGG + chr5_3:16253088-16253107 Msa0802070:CDS 55.0%
ACTCACCTGGTGGTTCTCTC+AGG + chr5_3:16253220-16253239 Msa0802070:CDS 55.0%
!! ACTGTGACCGATTTTGGGGG+TGG + chr5_3:16253691-16253710 Msa0802070:intron 55.0%
CACGACACATGTCGAACACC+GGG + chr5_3:16254236-16254255 Msa0802070:intron 55.0%
GGGACACGCCTTCAAAGTGT+TGG + chr5_3:16254256-16254275 Msa0802070:intron 55.0%
GTAGGAAAATACACGGGGGC+TGG + chr5_3:16254816-16254835 Msa0802070:intron 55.0%
AATATACCACCACGGGAGGG+GGG - chr5_3:16255788-16255807 None:intergenic 55.0%
GAATATACCACCACGGGAGG+GGG - chr5_3:16255789-16255808 None:intergenic 55.0%
!! TGCAGTGCAGCTTGTTAGGG+CGG + chr5_3:16256111-16256130 Msa0802070:CDS 55.0%
! ATCCTAGGTGGTGGCACCAA+AGG + chr5_3:16256181-16256200 Msa0802070:CDS 55.0%
!! TACCTTTGGTGCCACCACCT+AGG - chr5_3:16256186-16256205 None:intergenic 55.0%
GTGGTGGCACCAAAGGTAAG+CGG + chr5_3:16256188-16256207 Msa0802070:CDS 55.0%
!!! TTTTCTGGCACTGGCAGGAG+AGG - chr5_3:16256466-16256485 None:intergenic 55.0%
TCTCCTGCCAGTGCCAGAAA+AGG + chr5_3:16256465-16256484 Msa0802070:CDS 55.0%
TATACCACAAGCCCCGCAAG+AGG - chr5_3:16256616-16256635 None:intergenic 55.0%
CTCCCTCAACAACAACCCCA+TGG - chr5_3:16253088-16253107 None:intergenic 55.0%
! TGGGGTTGTTGTTGAGGGAG+AGG + chr5_3:16253088-16253107 Msa0802070:CDS 55.0%
ACTCACCTGGTGGTTCTCTC+AGG + chr5_3:16253220-16253239 Msa0802070:CDS 55.0%
!! ACTGTGACCGATTTTGGGGG+TGG + chr5_3:16253691-16253710 Msa0802070:intron 55.0%
CACGACACATGTCGAACACC+GGG + chr5_3:16254236-16254255 Msa0802070:intron 55.0%
GGGACACGCCTTCAAAGTGT+TGG + chr5_3:16254256-16254275 Msa0802070:intron 55.0%
GTAGGAAAATACACGGGGGC+TGG + chr5_3:16254816-16254835 Msa0802070:intron 55.0%
AATATACCACCACGGGAGGG+GGG - chr5_3:16255788-16255807 None:intergenic 55.0%
GAATATACCACCACGGGAGG+GGG - chr5_3:16255789-16255808 None:intergenic 55.0%
!! TGCAGTGCAGCTTGTTAGGG+CGG + chr5_3:16256111-16256130 Msa0802070:CDS 55.0%
! ATCCTAGGTGGTGGCACCAA+AGG + chr5_3:16256181-16256200 Msa0802070:CDS 55.0%
!! TACCTTTGGTGCCACCACCT+AGG - chr5_3:16256186-16256205 None:intergenic 55.0%
GTGGTGGCACCAAAGGTAAG+CGG + chr5_3:16256188-16256207 Msa0802070:CDS 55.0%
!!! TTTTCTGGCACTGGCAGGAG+AGG - chr5_3:16256466-16256485 None:intergenic 55.0%
TCTCCTGCCAGTGCCAGAAA+AGG + chr5_3:16256465-16256484 Msa0802070:CDS 55.0%
TATACCACAAGCCCCGCAAG+AGG - chr5_3:16256616-16256635 None:intergenic 55.0%
AATGTCTTCGCCGCAGACGC+CGG + chr5_3:16253032-16253051 Msa0802070:CDS 60.0%
GCACCTCTCATAGCCCGTTC+CGG - chr5_3:16253054-16253073 None:intergenic 60.0%
!! GACCGATTTTGGGGGTGGCT+TGG + chr5_3:16253696-16253715 Msa0802070:intron 60.0%
ATATACCACCACGGGAGGGG+GGG - chr5_3:16255787-16255806 None:intergenic 60.0%
!! CAACCACCTGGAGGTGCTAG+TGG + chr5_3:16256244-16256263 Msa0802070:CDS 60.0%
TGTCCACTAGCACCTCCAGG+TGG - chr5_3:16256250-16256269 None:intergenic 60.0%
GCTTGTCCACTAGCACCTCC+AGG - chr5_3:16256253-16256272 None:intergenic 60.0%
TTCAAGTGAGCGGCCGGTGA+AGG - chr5_3:16256344-16256363 None:intergenic 60.0%
!!! CCACCTTTTCTGGCACTGGC+AGG - chr5_3:16256471-16256490 None:intergenic 60.0%
CCTGCCAGTGCCAGAAAAGG+TGG + chr5_3:16256468-16256487 Msa0802070:CDS 60.0%
TCATCCTCTTGCGGGGCTTG+TGG + chr5_3:16256609-16256628 Msa0802070:three_prime_UTR 60.0%
AATGTCTTCGCCGCAGACGC+CGG + chr5_3:16253032-16253051 Msa0802070:CDS 60.0%
GCACCTCTCATAGCCCGTTC+CGG - chr5_3:16253054-16253073 None:intergenic 60.0%
!! GACCGATTTTGGGGGTGGCT+TGG + chr5_3:16253696-16253715 Msa0802070:intron 60.0%
ATATACCACCACGGGAGGGG+GGG - chr5_3:16255787-16255806 None:intergenic 60.0%
!! CAACCACCTGGAGGTGCTAG+TGG + chr5_3:16256244-16256263 Msa0802070:CDS 60.0%
TGTCCACTAGCACCTCCAGG+TGG - chr5_3:16256250-16256269 None:intergenic 60.0%
GCTTGTCCACTAGCACCTCC+AGG - chr5_3:16256253-16256272 None:intergenic 60.0%
TTCAAGTGAGCGGCCGGTGA+AGG - chr5_3:16256344-16256363 None:intergenic 60.0%
!!! CCACCTTTTCTGGCACTGGC+AGG - chr5_3:16256471-16256490 None:intergenic 60.0%
CCTGCCAGTGCCAGAAAAGG+TGG + chr5_3:16256468-16256487 Msa0802070:CDS 60.0%
TCATCCTCTTGCGGGGCTTG+TGG + chr5_3:16256609-16256628 Msa0802070:three_prime_UTR 60.0%
ATAGCCCGTTCCGGCGTCTG+CGG - chr5_3:16253045-16253064 None:intergenic 65.0%
!! ACGCCGGAACGGGCTATGAG+AGG + chr5_3:16253048-16253067 Msa0802070:CDS 65.0%
TTGCATTTCCCCCCCTCCCG+TGG + chr5_3:16255776-16255795 Msa0802070:intron 65.0%
ATAGCCCGTTCCGGCGTCTG+CGG - chr5_3:16253045-16253064 None:intergenic 65.0%
!! ACGCCGGAACGGGCTATGAG+AGG + chr5_3:16253048-16253067 Msa0802070:CDS 65.0%
TTGCATTTCCCCCCCTCCCG+TGG + chr5_3:16255776-16255795 Msa0802070:intron 65.0%
CTTCGCCGCAGACGCCGGAA+CGG + chr5_3:16253037-16253056 Msa0802070:CDS 70.0%
TTCGCCGCAGACGCCGGAAC+GGG + chr5_3:16253038-16253057 Msa0802070:CDS 70.0%
CATTTCCCCCCCTCCCGTGG+TGG + chr5_3:16255779-16255798 Msa0802070:intron 70.0%
CTTCGCCGCAGACGCCGGAA+CGG + chr5_3:16253037-16253056 Msa0802070:CDS 70.0%
TTCGCCGCAGACGCCGGAAC+GGG + chr5_3:16253038-16253057 Msa0802070:CDS 70.0%
CATTTCCCCCCCTCCCGTGG+TGG + chr5_3:16255779-16255798 Msa0802070:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 16252761 16256841 16252761 ID=Msa0802070;Name=Msa0802070
chr5_3 mRNA 16252761 16256841 16252761 ID=Msa0802070-mRNA-1;Parent=Msa0802070;Name=Msa0802070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=50|1|1|1|1|1|2|280|300
chr5_3 exon 16252761 16253241 16252761 ID=Msa0802070-mRNA-1:exon:6770;Parent=Msa0802070-mRNA-1
chr5_3 exon 16256090 16256841 16256090 ID=Msa0802070-mRNA-1:exon:6771;Parent=Msa0802070-mRNA-1
chr5_3 five_prime_UTR 16252761 16252810 16252761 ID=Msa0802070-mRNA-1:five_prime_utr;Parent=Msa0802070-mRNA-1
chr5_3 CDS 16252811 16253241 16252811 ID=Msa0802070-mRNA-1:cds;Parent=Msa0802070-mRNA-1
chr5_3 CDS 16256090 16256561 16256090 ID=Msa0802070-mRNA-1:cds;Parent=Msa0802070-mRNA-1
chr5_3 three_prime_UTR 16256562 16256841 16256562 ID=Msa0802070-mRNA-1:three_prime_utr;Parent=Msa0802070-mRNA-1
Gene Sequence

>Msa0802070

ATGGATTTCCTCACAACCTCTCTTTCTCATCCTTCAACTTCCCTTCCATCTCTCTCACAACGCATTCCCACCCTCTTTTCAAAACCACCCATTTCCTCTTTCAACCCTAAATCCCAATTTCGCACAACTCCAATCAACTGCGTCCTCACAACCCCATCAACAAAACCCTCCAAAGATTCTAACTTTAACCCCCAACTTCAAAAACCCACTATCACTTTTCAAATGTCTTCGCCGCAGACGCCGGAACGGGCTATGAGAGGTGCTGAATCTGATACCATGGGGTTGTTGTTGAGGGAGAGGATTGTGTTCTTGGGTAGTGAAATTGATGATTTTGTTGCTGATGCTATTATGAGTCAGTTGTTGCTTTTGGATGCTCAAGATCCTACTAAAGATATCAAGCTTTTTATCAACTCACCTGGTGGTTCTCTCAGTGCTACAATGGCTATCTACGATGCAGTGCAGCTTGTTAGGGCGGATGTATCCACAATTGCAATGGGCATTGCAGCATCAACAGCCTCAATTATCCTAGGTGGTGGCACCAAAGGTAAGCGGCTAGCTATGCCCAATACGCGAATCATGATTGCTCAACCACCTGGAGGTGCTAGTGGACAAGCTATAGACGTAGAAATTCAAGCTAGAGAAGTCATGCACAACAAGAACAATGTGTCCAGAATCATATCTTCCTTCACCGGCCGCTCACTTGAACAAGTTCTGAAAGATATTGATAGGGATAGATATCTGTCTCCAATTGAAGCGGTGGAATATGGAATTATTGACGGGGTAATCGATAGAGAAATGATTATTCCTCTCCTGCCAGTGCCAGAAAAGGTGGAAGAAGCAACACTAAACACCGATGATGCGGATTTCCTAACCCCACATATCCCAGATGATGAGATATACTAG

Protein sequence

>Msa0802070

MDFLTTSLSHPSTSLPSLSQRIPTLFSKPPISSFNPKSQFRTTPINCVLTTPSTKPSKDSNFNPQLQKPTITFQMSSPQTPERAMRGAESDTMGLLLRERIVFLGSEIDDFVADAIMSQLLLLDAQDPTKDIKLFINSPGGSLSATMAIYDAVQLVRADVSTIAMGIAASTASIILGGGTKGKRLAMPNTRIMIAQPPGGASGQAIDVEIQAREVMHNKNNVSRIISSFTGRSLEQVLKDIDRDRYLSPIEAVEYGIIDGVIDREMIIPLLPVPEKVEEATLNTDDADFLTPHIPDDEIY*