AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0888460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0888460 MtrunA17_Chr6g0469941 98.855 524 6 0 1 524 1 524 0.0 1078
Msa0888460 MtrunA17_Chr5g0442211 28.859 447 243 14 80 522 65 440 4.03e-38 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0888460 AT5G24060.3 47.059 459 215 8 71 523 27 463 1.20e-134 399
Msa0888460 AT5G24060.2 47.368 456 212 8 74 523 60 493 1.70e-134 399
Msa0888460 AT5G24060.1 47.461 453 210 8 77 523 50 480 4.34e-134 398
Msa0888460 AT3G49140.1 44.276 463 215 7 71 517 64 499 3.08e-116 353
Msa0888460 AT3G59300.3 31.325 415 219 10 104 515 103 454 5.41e-51 181
Msa0888460 AT3G59300.1 31.325 415 219 10 104 515 97 448 5.68e-51 181
Msa0888460 AT3G59300.2 30.097 412 195 12 104 515 97 415 1.01e-43 160

Find 131 sgRNAs with CRISPR-Local

Find 938 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAGGCATTTGTTTGTTTA+TGG 0.131939 6_1:-52954060 Msa0888460:three_prime_UTR
TAAATAAGATAAATTACTTT+TGG 0.251917 6_1:+52954027 None:intergenic
TTCTGTTACTTTACTAATTT+CGG 0.255906 6_1:+52956366 None:intergenic
TGTTGCATTTAATCAATAAT+TGG 0.259415 6_1:-52954287 Msa0888460:three_prime_UTR
AACAATCTCCAATCTGTAAA+AGG 0.275206 6_1:+52956222 None:intergenic
TTTCAAATGAGATATAATTT+TGG 0.282845 6_1:+52955613 None:intergenic
GAAAGTATTGGTGCGATTAA+TGG 0.286625 6_1:-52956334 Msa0888460:CDS
GAGAGAGAGAGTACGGAGAT+TGG 0.292151 6_1:+52961511 None:intergenic
CCATGTTCATCTGTCAAATA+TGG 0.298949 6_1:+52957752 None:intergenic
GATGAGGTACACCTTCCTTT+TGG 0.302863 6_1:+52961672 None:intergenic
TGTTGCTTTGGATGATTTCT+TGG 0.311016 6_1:+52954461 None:intergenic
ACTTGCAGACTGGGCAAAAT+TGG 0.313686 6_1:-52956705 Msa0888460:CDS
CATATCAGACTAATCAAATT+AGG 0.328978 6_1:+52954203 None:intergenic
CTTCAGATGATCCAATTGAT+TGG 0.355755 6_1:-52956498 Msa0888460:CDS
CTCCGGGGAAATGGAGTGCC+TGG 0.361702 6_1:+52958861 None:intergenic
TCTTCACAAGTTTGTTTCTC+CGG 0.373500 6_1:+52958844 None:intergenic
GATGTGAATGGTGGTGGATT+AGG 0.379447 6_1:-52961192 Msa0888460:CDS
GTCCATCAGAAATTGACTTT+GGG 0.382835 6_1:-52956999 Msa0888460:CDS
TCTGTCAAATATGGCAAATC+TGG 0.384390 6_1:+52957761 None:intergenic
AGTTTGTTTCTCCGGGGAAA+TGG 0.385331 6_1:+52958852 None:intergenic
ATTGGAAAAGCGAGTGGAGG+AGG 0.388769 6_1:+52961529 None:intergenic
TTTACTAATTTCGGCAGTAC+TGG 0.390296 6_1:+52956375 None:intergenic
TCGTGTAGTCTTCTACTTCA+AGG 0.390376 6_1:+52955669 None:intergenic
GGAGGAGGAGAGGTGAAAGC+GGG 0.392005 6_1:+52961547 None:intergenic
TTCGGCAGTACTGGATTGAT+TGG 0.396859 6_1:+52956384 None:intergenic
AATATCATGATAATATTGTT+TGG 0.402796 6_1:-52957784 Msa0888460:CDS
GCAGATAGATGCTTCTGTAT+TGG 0.403056 6_1:+52956406 None:intergenic
GGATTTGTCTACTTCGTGAT+TGG 0.406941 6_1:+52961693 None:intergenic
GGTCCATCAGAAATTGACTT+TGG 0.406974 6_1:-52957000 Msa0888460:CDS
GGCTGCTCCATCCAATCAAT+TGG 0.411923 6_1:+52956487 None:intergenic
GGAAAAGCGAGTGGAGGAGG+AGG 0.417403 6_1:+52961532 None:intergenic
GAGGCAGCTATTTCCTCAAA+TGG 0.417837 6_1:+52958744 None:intergenic
AGAAATTGACTTTGGGATTG+AGG 0.418025 6_1:-52956992 Msa0888460:CDS
AGGTGAAAGCGGGTGGCAAT+GGG 0.421436 6_1:+52961557 None:intergenic
GAGGTGAAAGCGGGTGGCAA+TGG 0.424322 6_1:+52961556 None:intergenic
TGAGATTCGGATTCAAGAAA+AGG 0.431101 6_1:-52955031 Msa0888460:CDS
TCACTTCTGTACACAATCAT+TGG 0.433362 6_1:+52954358 None:intergenic
TATTTCCTCAAATGGGTGAT+AGG 0.435060 6_1:+52958752 None:intergenic
ATCTCTGAGATGGACTTATC+AGG 0.436637 6_1:-52957021 Msa0888460:CDS
CTTCACAAGTTTGTTTCTCC+GGG 0.437426 6_1:+52958845 None:intergenic
AGGAGGAGGAGAGGTGAAAG+CGG 0.445403 6_1:+52961546 None:intergenic
ATATCTCATTTGAAAGCTGC+TGG 0.447699 6_1:-52955605 Msa0888460:CDS
CTTATCTGTGTGGACTCGCT+CGG 0.448010 6_1:-52955095 Msa0888460:CDS
ACTCGCTCGGGTTTGACGTA+AGG 0.448186 6_1:-52955082 Msa0888460:CDS
TTATTGTTTGCAGGAATGGC+TGG 0.463297 6_1:-52956774 Msa0888460:intron
TATCCAACAGAGAGACTTAA+GGG 0.466816 6_1:+52955559 None:intergenic
AGCGAGTGGAGGAGGAGGAG+AGG 0.468033 6_1:+52961537 None:intergenic
CAAGTTCAAACACTGAGATT+CGG 0.468623 6_1:-52955044 Msa0888460:CDS
ATATCCAACAGAGAGACTTA+AGG 0.470097 6_1:+52955558 None:intergenic
CTCGCTCGGGTTTGACGTAA+GGG 0.472152 6_1:-52955081 Msa0888460:CDS
CAACCTCATTGGCATTTGCA+TGG 0.473578 6_1:+52954319 None:intergenic
TTATCTGTGTGGACTCGCTC+GGG 0.475357 6_1:-52955094 Msa0888460:CDS
TTTGACGTAAGGGTTTGTTC+AGG 0.476902 6_1:-52955071 Msa0888460:CDS
TGCTACACCCGTGCATTGCG+CGG 0.490385 6_1:+52954087 None:intergenic
TTGTATGGCTTGTATGACTT+TGG 0.490843 6_1:-52954381 Msa0888460:three_prime_UTR
ACGCAGGTCTTATAACTCCT+TGG 0.498828 6_1:+52956446 None:intergenic
TCCTCAAATGGGTGATAGGA+TGG 0.503275 6_1:+52958756 None:intergenic
AGATGATCCAATTGATTGGA+TGG 0.503955 6_1:-52956494 Msa0888460:CDS
GCGGAAGATGTGAATGGTGG+TGG 0.505698 6_1:-52961198 Msa0888460:CDS
TGAAGATAACGAATCACAAA+AGG 0.506827 6_1:-52956287 Msa0888460:CDS
ATGATGAAGCACTTGCAGAC+TGG 0.507045 6_1:-52956715 Msa0888460:CDS
ACAACATCCTAGCTCAGATC+AGG 0.512194 6_1:-52958802 Msa0888460:CDS
CCAGCTTGTGTAGTCTTCCA+AGG 0.514469 6_1:-52956463 Msa0888460:CDS
GATGACCTTGCAATAGCATC+AGG 0.521832 6_1:+52955638 None:intergenic
GGACAACAAGGAAGTAACTA+AGG 0.522354 6_1:+52954251 None:intergenic
AAGGTGGAAAATAATGAGAA+TGG 0.522737 6_1:-52956268 Msa0888460:CDS
AACCTCATTGGCATTTGCAT+GGG 0.523316 6_1:+52954320 None:intergenic
TGATGAAGCACTTGCAGACT+GGG 0.525455 6_1:-52956714 Msa0888460:CDS
AAGAAAGAAGAAAGAAGATG+AGG 0.526100 6_1:+52961656 None:intergenic
GTCTCTCTGTTGGATATGCA+AGG 0.527770 6_1:-52955552 Msa0888460:CDS
ATCCCAAAGTCAATTTCTGA+TGG 0.528071 6_1:+52956997 None:intergenic
TGAAAATGAAGACGAGAATG+AGG 0.528665 6_1:-52956911 Msa0888460:CDS
GGACTGCAAAATATCTTCAC+CGG 0.530976 6_1:+52957613 None:intergenic
AGGCAGCTATTTCCTCAAAT+GGG 0.535456 6_1:+52958745 None:intergenic
TAAAAGGAAGTCTCGTCTGA+AGG 0.536320 6_1:+52956238 None:intergenic
CACGGGTGTAGCAGATGTAA+AGG 0.537804 6_1:-52954077 Msa0888460:three_prime_UTR
GAAAACAAAGAAGAAAGTAT+TGG 0.538217 6_1:-52956346 Msa0888460:CDS
TTTAGACCCGCGCAATGCAC+GGG 0.538388 6_1:-52954094 Msa0888460:three_prime_UTR
AACAAGTAGAACTGTTATTG+AGG 0.539337 6_1:-52958679 Msa0888460:intron
GGATCGATAATCATCATAGT+TGG 0.540767 6_1:+52961581 None:intergenic
ATTTAGACCCGCGCAATGCA+CGG 0.543080 6_1:-52954095 Msa0888460:three_prime_UTR
AGACTTGCTTGTAGCTGTGG+TGG 0.547199 6_1:-52961153 Msa0888460:CDS
GAGATTCGGATTCAAGAAAA+GGG 0.555218 6_1:-52955030 Msa0888460:intron
ACAGGCTCCTGATCTGAGCT+AGG 0.557261 6_1:+52958795 None:intergenic
GCCATCCTATCACCCATTTG+AGG 0.558341 6_1:-52958757 Msa0888460:CDS
GGAGGAGAGGTGAAAGCGGG+TGG 0.559349 6_1:+52961550 None:intergenic
CATAATTGGTGTGGATACCA+TGG 0.560333 6_1:-52957049 Msa0888460:CDS
GCTACACCCGTGCATTGCGC+GGG 0.560372 6_1:+52954088 None:intergenic
TTGTGTACAGAAGTGAAGGC+AGG 0.560544 6_1:-52954351 Msa0888460:three_prime_UTR
TGAAAGCGGGTGGCAATGGG+AGG 0.563206 6_1:+52961560 None:intergenic
TTCCCATGCAAATGCCAATG+AGG 0.563734 6_1:-52954322 Msa0888460:three_prime_UTR
ACGAAGTAGACAAATCCAAA+AGG 0.563854 6_1:-52961687 Msa0888460:five_prime_UTR
CCTTGGAAGACTACACAAGC+TGG 0.567061 6_1:+52956463 None:intergenic
ATCATACTTGCAGGCTACGT+CGG 0.568148 6_1:-52954522 Msa0888460:intron
CATCTCAGAGATCATTTCCA+TGG 0.568661 6_1:+52957032 None:intergenic
TCCGGGGAAATGGAGTGCCT+GGG 0.569648 6_1:+52958862 None:intergenic
CATGGAAATGATCTCTGAGA+TGG 0.575487 6_1:-52957031 Msa0888460:CDS
GGTTAACAGCAAAGCAACAA+TGG 0.576380 6_1:-52957831 Msa0888460:CDS
AAAAGGAAGTCTCGTCTGAA+GGG 0.577512 6_1:+52956239 None:intergenic
CCATATTTGACAGATGAACA+TGG 0.584747 6_1:-52957752 Msa0888460:CDS
CGAGAATGAGGATTATGACT+CGG 0.584861 6_1:-52956899 Msa0888460:intron
GGAAATAGCTGCCTCCACAT+TGG 0.585698 6_1:-52958736 Msa0888460:CDS
TGTAGACTTGCTTGTAGCTG+TGG 0.588183 6_1:-52961156 Msa0888460:CDS
ATGATTGTGTACAGAAGTGA+AGG 0.588464 6_1:-52954355 Msa0888460:three_prime_UTR
TATATCATTGAGTTGTCTCT+CGG 0.590503 6_1:+52954490 None:intergenic
AAGCCCTTAAGTCTCTCTGT+TGG 0.591338 6_1:-52955562 Msa0888460:CDS
GTAGCAAGTCATAATTGGTG+TGG 0.591867 6_1:-52957058 Msa0888460:intron
TAATCGTTCAACGTGGAATG+CGG 0.596505 6_1:-52961217 Msa0888460:CDS
AGATAACGAATCACAAAAGG+TGG 0.597356 6_1:-52956284 Msa0888460:CDS
TCTCTCTGTTGGATATGCAA+GGG 0.606977 6_1:-52955551 Msa0888460:CDS
GACTGCAAAATATCTTCACC+GGG 0.607488 6_1:+52957614 None:intergenic
TTAAGAGAGATGCATAGTGG+TGG 0.610697 6_1:+52961624 None:intergenic
AGTAGACAAATCCAAAAGGA+AGG 0.616084 6_1:-52961683 Msa0888460:five_prime_UTR
TGTGTACAGAAGTGAAGGCA+GGG 0.619745 6_1:-52954350 Msa0888460:three_prime_UTR
CTCAACCTGATGCTATTGCA+AGG 0.627135 6_1:-52955643 Msa0888460:CDS
ACGGAGATTGGAAAAGCGAG+TGG 0.630678 6_1:+52961523 None:intergenic
AATTAGGAGACAGGACAACA+AGG 0.633949 6_1:+52954239 None:intergenic
GATATGCAAGGGTATTCAAG+TGG 0.638092 6_1:-52955540 Msa0888460:CDS
CTCACTAATCTCCAATGTGG+AGG 0.643018 6_1:+52958725 None:intergenic
ATGCAAGGGTATTCAAGTGG+AGG 0.645083 6_1:-52955537 Msa0888460:intron
GAGATTGGAAAAGCGAGTGG+AGG 0.645581 6_1:+52961526 None:intergenic
TGGAATGCGGAAGATGTGAA+TGG 0.649111 6_1:-52961204 Msa0888460:CDS
ATCCTCACTAATCTCCAATG+TGG 0.656177 6_1:+52958722 None:intergenic
CTCCACATTGGAGATTAGTG+AGG 0.667251 6_1:-52958724 Msa0888460:CDS
TTCACAAGTTTGTTTCTCCG+GGG 0.684542 6_1:+52958846 None:intergenic
AATGCGGAAGATGTGAATGG+TGG 0.684835 6_1:-52961201 Msa0888460:CDS
ATGTTAAGAGAGATGCATAG+TGG 0.691090 6_1:+52961621 None:intergenic
GGAGGCACAACTTATCTGTG+TGG 0.695572 6_1:-52955105 Msa0888460:CDS
GTGGTGGTTTCGACGCGCCG+TGG 0.699026 6_1:-52961137 Msa0888460:intron
CAGATAATAATCGTTCAACG+TGG 0.706751 6_1:-52961224 Msa0888460:CDS
TGGAAGACTACACAAGCTGG+AGG 0.707383 6_1:+52956466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATGTATAAATTTTGTT+TGG - chr6_1:52957597-52957616 Msa0888460:CDS 10.0%
!!! ATGGATATATTTAATTTAAA+AGG - chr6_1:52959693-52959712 Msa0888460:intron 10.0%
!!! TGGATATATTTAATTTAAAA+GGG - chr6_1:52959694-52959713 Msa0888460:intron 10.0%
!!! TAAATAAGATAAATTACTTT+TGG + chr6_1:52961678-52961697 None:intergenic 10.0%
!!! AAAAATGTATAAATTTTGTT+TGG - chr6_1:52957597-52957616 Msa0888460:CDS 10.0%
!!! ATGGATATATTTAATTTAAA+AGG - chr6_1:52959693-52959712 Msa0888460:intron 10.0%
!!! TGGATATATTTAATTTAAAA+GGG - chr6_1:52959694-52959713 Msa0888460:intron 10.0%
!!! TAAATAAGATAAATTACTTT+TGG + chr6_1:52961678-52961697 None:intergenic 10.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr6_1:52954313-52954332 None:intergenic 15.0%
!!! TTTGTAATAATTTTGTGATT+TGG - chr6_1:52954708-52954727 Msa0888460:intron 15.0%
!! ACATAAGTTTAAAAAACATA+AGG + chr6_1:52955161-52955180 None:intergenic 15.0%
!!! GGTTATTTTTTTATGATTTT+CGG - chr6_1:52955400-52955419 Msa0888460:intron 15.0%
!!! GTTATTTTTTTATGATTTTC+GGG - chr6_1:52955401-52955420 Msa0888460:intron 15.0%
!! ATAATTTGATATAATTATGC+AGG - chr6_1:52956800-52956819 Msa0888460:intron 15.0%
!!! TTAAAAATGTTAATACCTTT+TGG + chr6_1:52957326-52957345 None:intergenic 15.0%
!!! GGTATTAACATTTTTAAATA+AGG - chr6_1:52957329-52957348 Msa0888460:intron 15.0%
!! AATATCATGATAATATTGTT+TGG - chr6_1:52957918-52957937 Msa0888460:intron 15.0%
!!! AAAATTATTTTCTGAAGTTA+GGG + chr6_1:52958113-52958132 None:intergenic 15.0%
!! TTGTTCATATTTATTGATAT+TGG - chr6_1:52959611-52959630 Msa0888460:intron 15.0%
!! AAAGAAAAAAAAACTATAAC+AGG - chr6_1:52959734-52959753 Msa0888460:intron 15.0%
!!! CTTTACTGATTTATAAATAT+CGG - chr6_1:52959759-52959778 Msa0888460:intron 15.0%
!!! TTTCAAATGAGATATAATTT+TGG + chr6_1:52960092-52960111 None:intergenic 15.0%
!! AACTATGTCATAAAATATAT+AGG + chr6_1:52960734-52960753 None:intergenic 15.0%
!! TAATAAATTTGTAGTTAAAG+AGG - chr6_1:52960860-52960879 Msa0888460:intron 15.0%
!! AATAAATTTGTAGTTAAAGA+GGG - chr6_1:52960861-52960880 Msa0888460:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr6_1:52954313-52954332 None:intergenic 15.0%
!!! TTTGTAATAATTTTGTGATT+TGG - chr6_1:52954708-52954727 Msa0888460:intron 15.0%
!! ACATAAGTTTAAAAAACATA+AGG + chr6_1:52955161-52955180 None:intergenic 15.0%
!!! GGTTATTTTTTTATGATTTT+CGG - chr6_1:52955400-52955419 Msa0888460:intron 15.0%
!!! GTTATTTTTTTATGATTTTC+GGG - chr6_1:52955401-52955420 Msa0888460:intron 15.0%
!! ATAATTTGATATAATTATGC+AGG - chr6_1:52956800-52956819 Msa0888460:intron 15.0%
!!! TTAAAAATGTTAATACCTTT+TGG + chr6_1:52957326-52957345 None:intergenic 15.0%
!!! GGTATTAACATTTTTAAATA+AGG - chr6_1:52957329-52957348 Msa0888460:intron 15.0%
!! AATATCATGATAATATTGTT+TGG - chr6_1:52957918-52957937 Msa0888460:intron 15.0%
!!! AAAATTATTTTCTGAAGTTA+GGG + chr6_1:52958113-52958132 None:intergenic 15.0%
!! TTGTTCATATTTATTGATAT+TGG - chr6_1:52959611-52959630 Msa0888460:intron 15.0%
!! AAAGAAAAAAAAACTATAAC+AGG - chr6_1:52959734-52959753 Msa0888460:intron 15.0%
!!! CTTTACTGATTTATAAATAT+CGG - chr6_1:52959759-52959778 Msa0888460:intron 15.0%
!!! TTTCAAATGAGATATAATTT+TGG + chr6_1:52960092-52960111 None:intergenic 15.0%
!! AACTATGTCATAAAATATAT+AGG + chr6_1:52960734-52960753 None:intergenic 15.0%
!! TAATAAATTTGTAGTTAAAG+AGG - chr6_1:52960860-52960879 Msa0888460:intron 15.0%
!! AATAAATTTGTAGTTAAAGA+GGG - chr6_1:52960861-52960880 Msa0888460:intron 15.0%
!! CCATTAAACTCTAATAATAA+AGG + chr6_1:52954604-52954623 None:intergenic 20.0%
!! CCTTTATTATTAGAGTTTAA+TGG - chr6_1:52954601-52954620 Msa0888460:intron 20.0%
!!! AAAATAGTTTTACAATGTTG+TGG - chr6_1:52954761-52954780 Msa0888460:intron 20.0%
!!! ATCTTCTATTTTGATGATTT+AGG - chr6_1:52954785-52954804 Msa0888460:intron 20.0%
!!! TCTTCTATTTTGATGATTTA+GGG - chr6_1:52954786-52954805 Msa0888460:intron 20.0%
!!! TATGAAAATTGGTTTAGTTA+TGG - chr6_1:52954816-52954835 Msa0888460:intron 20.0%
!! AGTTTAAAAAACATAAGGTA+CGG + chr6_1:52955156-52955175 None:intergenic 20.0%
!! AAAAGTTTATCTCAACAAAT+CGG + chr6_1:52956190-52956209 None:intergenic 20.0%
!!! TTTATTTTGAGAATTTGAGT+TGG - chr6_1:52956207-52956226 Msa0888460:CDS 20.0%
!!! TTATTTTGAGAATTTGAGTT+GGG - chr6_1:52956208-52956227 Msa0888460:CDS 20.0%
!!! ATCATCTTAGGTTTTTATAT+TGG - chr6_1:52956494-52956513 Msa0888460:CDS 20.0%
!!! TCATCTTAGGTTTTTATATT+GGG - chr6_1:52956495-52956514 Msa0888460:CDS 20.0%
!!! CAGTATTTTCTAAAATGAAA+CGG + chr6_1:52957259-52957278 None:intergenic 20.0%
!! CAATTTAATCTCCTATTTAT+CGG + chr6_1:52957402-52957421 None:intergenic 20.0%
!! CAAAACAAAGAATAATACAA+TGG + chr6_1:52957426-52957445 None:intergenic 20.0%
!! TTATTGAATATGCTTAAGTT+GGG - chr6_1:52957518-52957537 Msa0888460:intron 20.0%
!!! CAAAATTATTTTCTGAAGTT+AGG + chr6_1:52958114-52958133 None:intergenic 20.0%
!!! AACTTCAGAAAATAATTTTG+TGG - chr6_1:52958114-52958133 Msa0888460:intron 20.0%
!! AGAATTAAGATTAGAACAAA+AGG + chr6_1:52958555-52958574 None:intergenic 20.0%
!! AACAATAATATGAATAACAG+TGG + chr6_1:52958916-52958935 None:intergenic 20.0%
!! TTATTCATATTATTGTTTGC+AGG - chr6_1:52958919-52958938 Msa0888460:intron 20.0%
!!! AATTTTTTAGCAAAATCCAT+TGG + chr6_1:52959043-52959062 None:intergenic 20.0%
!!! TTCTGTTACTTTACTAATTT+CGG + chr6_1:52959339-52959358 None:intergenic 20.0%
!!! TATTTATTCTAAGAAACATG+AGG - chr6_1:52959883-52959902 Msa0888460:intron 20.0%
!!! TATTTATACCTTTTCTTTGT+TGG - chr6_1:52959975-52959994 Msa0888460:intron 20.0%
!! TGAAATGATCAAATACTATT+TGG - chr6_1:52960459-52960478 Msa0888460:intron 20.0%
!! GAAATGATCAAATACTATTT+GGG - chr6_1:52960460-52960479 Msa0888460:intron 20.0%
!! ATAAATTTGTAGTTAAAGAG+GGG - chr6_1:52960862-52960881 Msa0888460:intron 20.0%
!! TTTACCAAACTTCATAATAT+TGG - chr6_1:52960916-52960935 Msa0888460:intron 20.0%
!! TTACCAAACTTCATAATATT+GGG - chr6_1:52960917-52960936 Msa0888460:intron 20.0%
!! TGTTGCATTTAATCAATAAT+TGG - chr6_1:52961415-52961434 Msa0888460:intron 20.0%
!! TTTAAAAAAAATTAGGAGAC+AGG + chr6_1:52961475-52961494 None:intergenic 20.0%
!!! AGGACGTTTTAAAAAAAATT+AGG + chr6_1:52961482-52961501 None:intergenic 20.0%
!! CCATTAAACTCTAATAATAA+AGG + chr6_1:52954604-52954623 None:intergenic 20.0%
!! CCTTTATTATTAGAGTTTAA+TGG - chr6_1:52954601-52954620 Msa0888460:intron 20.0%
!!! AAAATAGTTTTACAATGTTG+TGG - chr6_1:52954761-52954780 Msa0888460:intron 20.0%
!!! ATCTTCTATTTTGATGATTT+AGG - chr6_1:52954785-52954804 Msa0888460:intron 20.0%
!!! TCTTCTATTTTGATGATTTA+GGG - chr6_1:52954786-52954805 Msa0888460:intron 20.0%
!!! TATGAAAATTGGTTTAGTTA+TGG - chr6_1:52954816-52954835 Msa0888460:intron 20.0%
!! AGTTTAAAAAACATAAGGTA+CGG + chr6_1:52955156-52955175 None:intergenic 20.0%
!! AAAAGTTTATCTCAACAAAT+CGG + chr6_1:52956190-52956209 None:intergenic 20.0%
!!! TTTATTTTGAGAATTTGAGT+TGG - chr6_1:52956207-52956226 Msa0888460:CDS 20.0%
!!! TTATTTTGAGAATTTGAGTT+GGG - chr6_1:52956208-52956227 Msa0888460:CDS 20.0%
!!! ATCATCTTAGGTTTTTATAT+TGG - chr6_1:52956494-52956513 Msa0888460:CDS 20.0%
!!! TCATCTTAGGTTTTTATATT+GGG - chr6_1:52956495-52956514 Msa0888460:CDS 20.0%
!!! CAGTATTTTCTAAAATGAAA+CGG + chr6_1:52957259-52957278 None:intergenic 20.0%
!! CAATTTAATCTCCTATTTAT+CGG + chr6_1:52957402-52957421 None:intergenic 20.0%
!! CAAAACAAAGAATAATACAA+TGG + chr6_1:52957426-52957445 None:intergenic 20.0%
!! TTATTGAATATGCTTAAGTT+GGG - chr6_1:52957518-52957537 Msa0888460:intron 20.0%
!!! CAAAATTATTTTCTGAAGTT+AGG + chr6_1:52958114-52958133 None:intergenic 20.0%
!!! AACTTCAGAAAATAATTTTG+TGG - chr6_1:52958114-52958133 Msa0888460:intron 20.0%
!! AGAATTAAGATTAGAACAAA+AGG + chr6_1:52958555-52958574 None:intergenic 20.0%
!! AACAATAATATGAATAACAG+TGG + chr6_1:52958916-52958935 None:intergenic 20.0%
!! TTATTCATATTATTGTTTGC+AGG - chr6_1:52958919-52958938 Msa0888460:intron 20.0%
!!! AATTTTTTAGCAAAATCCAT+TGG + chr6_1:52959043-52959062 None:intergenic 20.0%
!!! TTCTGTTACTTTACTAATTT+CGG + chr6_1:52959339-52959358 None:intergenic 20.0%
!!! TATTTATTCTAAGAAACATG+AGG - chr6_1:52959883-52959902 Msa0888460:intron 20.0%
!!! TATTTATACCTTTTCTTTGT+TGG - chr6_1:52959975-52959994 Msa0888460:intron 20.0%
!! TGAAATGATCAAATACTATT+TGG - chr6_1:52960459-52960478 Msa0888460:intron 20.0%
!! GAAATGATCAAATACTATTT+GGG - chr6_1:52960460-52960479 Msa0888460:intron 20.0%
!! ATAAATTTGTAGTTAAAGAG+GGG - chr6_1:52960862-52960881 Msa0888460:intron 20.0%
!! TTTACCAAACTTCATAATAT+TGG - chr6_1:52960916-52960935 Msa0888460:intron 20.0%
!! TTACCAAACTTCATAATATT+GGG - chr6_1:52960917-52960936 Msa0888460:intron 20.0%
!! TGTTGCATTTAATCAATAAT+TGG - chr6_1:52961415-52961434 Msa0888460:intron 20.0%
!! TTTAAAAAAAATTAGGAGAC+AGG + chr6_1:52961475-52961494 None:intergenic 20.0%
!!! AGGACGTTTTAAAAAAAATT+AGG + chr6_1:52961482-52961501 None:intergenic 20.0%
! TAAATATAACACTCAGCAAA+TGG + chr6_1:52954232-52954251 None:intergenic 25.0%
! AAGGTTAAATAACAATACCA+CGG + chr6_1:52954585-52954604 None:intergenic 25.0%
!!! GTAATAATTTTGTGATTTGG+TGG - chr6_1:52954711-52954730 Msa0888460:intron 25.0%
! TGGTGGAATACAAAATTTAT+TGG - chr6_1:52954728-52954747 Msa0888460:intron 25.0%
!!! CTTCTATTTTGATGATTTAG+GGG - chr6_1:52954787-52954806 Msa0888460:intron 25.0%
! TAGTTATGGTTGTTAAATTG+TGG - chr6_1:52954830-52954849 Msa0888460:intron 25.0%
! TGTTAAATTGTGGATACTTA+AGG - chr6_1:52954840-52954859 Msa0888460:intron 25.0%
! GTTTAAAAAACATAAGGTAC+GGG + chr6_1:52955155-52955174 None:intergenic 25.0%
! TTGTATCGTATGATGATTTA+AGG - chr6_1:52955509-52955528 Msa0888460:intron 25.0%
! TGTATCGTATGATGATTTAA+GGG - chr6_1:52955510-52955529 Msa0888460:intron 25.0%
! TTAACTACGAGAATAAAATG+AGG + chr6_1:52955882-52955901 None:intergenic 25.0%
!! TCATTTTATTCTCGTAGTTA+AGG - chr6_1:52955881-52955900 Msa0888460:intron 25.0%
! TGTCACTAAATAACTTTATG+CGG + chr6_1:52955952-52955971 None:intergenic 25.0%
!! CATTTGTTAATTCATTTCTC+AGG + chr6_1:52956685-52956704 None:intergenic 25.0%
! GAAATACTATATGTAATGAG+AGG - chr6_1:52956771-52956790 Msa0888460:intron 25.0%
! CACAAGGAGAAAATAAAATT+CGG - chr6_1:52957059-52957078 Msa0888460:intron 25.0%
! AATAAAATTCGGCAAACATT+TGG - chr6_1:52957070-52957089 Msa0888460:intron 25.0%
!! TGCTTGTTTAGAATTCATTT+AGG - chr6_1:52957289-52957308 Msa0888460:intron 25.0%
!! AAAATGTTAATACCTTTTGG+AGG + chr6_1:52957323-52957342 None:intergenic 25.0%
! AACTGTAAACCTAGAAAAAA+AGG + chr6_1:52957362-52957381 None:intergenic 25.0%
!!! TTTTTTTCTAGGTTTACAGT+TGG - chr6_1:52957361-52957380 Msa0888460:intron 25.0%
!!! TTTTTTCTAGGTTTACAGTT+GGG - chr6_1:52957362-52957381 Msa0888460:intron 25.0%
! GTAGATAATTACCGATAAAT+AGG - chr6_1:52957388-52957407 Msa0888460:intron 25.0%
! CGATAAATAGGAGATTAAAT+TGG - chr6_1:52957400-52957419 Msa0888460:intron 25.0%
! CATATTCAATAAGTCAAAAC+AGG + chr6_1:52957510-52957529 None:intergenic 25.0%
! CTTATTGAATATGCTTAAGT+TGG - chr6_1:52957517-52957536 Msa0888460:intron 25.0%
! AATGCAGATATTCTCTATTA+GGG + chr6_1:52957558-52957577 None:intergenic 25.0%
! TAATGCAGATATTCTCTATT+AGG + chr6_1:52957559-52957578 None:intergenic 25.0%
! AATAGAGAATATCTGCATTA+CGG - chr6_1:52957559-52957578 Msa0888460:intron 25.0%
! ATTCTGTTAAAAGAAACAGT+GGG + chr6_1:52957648-52957667 None:intergenic 25.0%
! AATTCTGTTAAAAGAAACAG+TGG + chr6_1:52957649-52957668 None:intergenic 25.0%
! TGCTTGTAGAATTTGATTAA+CGG + chr6_1:52958042-52958061 None:intergenic 25.0%
!! AATAATTTTGTGGTAAGACT+AGG - chr6_1:52958124-52958143 Msa0888460:intron 25.0%
! ACTGTTTGTAAGTATTTCAT+AGG + chr6_1:52958182-52958201 None:intergenic 25.0%
! AAACTGTAAGTATGTGAAAA+TGG + chr6_1:52958214-52958233 None:intergenic 25.0%
! ATGCCATTAATATAAGAACA+GGG + chr6_1:52958305-52958324 None:intergenic 25.0%
! AATGCCATTAATATAAGAAC+AGG + chr6_1:52958306-52958325 None:intergenic 25.0%
! AATGAACATCAAGAAAATGA+AGG + chr6_1:52958353-52958372 None:intergenic 25.0%
! AATTATTGTTGAAGTCCAAA+AGG + chr6_1:52958404-52958423 None:intergenic 25.0%
!! ATTTAATATCCTCACACTTT+TGG - chr6_1:52958421-52958440 Msa0888460:intron 25.0%
!! TTTAATATCCTCACACTTTT+GGG - chr6_1:52958422-52958441 Msa0888460:intron 25.0%
! AAAGTTTGCATATCTTAACA+GGG - chr6_1:52958595-52958614 Msa0888460:intron 25.0%
!!! AATTATGACTTGCTACAAAA+AGG + chr6_1:52958640-52958659 None:intergenic 25.0%
!! TTTTTGTAGCAAGTCATAAT+TGG - chr6_1:52958639-52958658 Msa0888460:intron 25.0%
!! TTTTGCTAAAAAATTGACTG+AGG - chr6_1:52959048-52959067 Msa0888460:intron 25.0%
! TGTTAATGTAACCTAATTTG+TGG - chr6_1:52959075-52959094 Msa0888460:intron 25.0%
!! GAAAACAAAGAAGAAAGTAT+TGG - chr6_1:52959356-52959375 Msa0888460:intron 25.0%
! AATTTAGTGACTGCTTTAAT+TGG - chr6_1:52959647-52959666 Msa0888460:intron 25.0%
! CATACTCAGTTAAGAAATAA+TGG - chr6_1:52959674-52959693 Msa0888460:intron 25.0%
!! ACCATTGATGTCAAAATTTT+AGG + chr6_1:52959785-52959804 None:intergenic 25.0%
! CTCTTAATTCATAACTCAAT+TGG - chr6_1:52959835-52959854 Msa0888460:intron 25.0%
! ATTATCAACACTTTAACCAT+GGG + chr6_1:52959918-52959937 None:intergenic 25.0%
! TATTATCAACACTTTAACCA+TGG + chr6_1:52959919-52959938 None:intergenic 25.0%
!! TTTAGTTTCCAACAAAGAAA+AGG + chr6_1:52959986-52960005 None:intergenic 25.0%
!!! CTTAAGTGTTCTAAAAAGAA+TGG + chr6_1:52960514-52960533 None:intergenic 25.0%
! ACGTAAAAATAGTGAGATTT+AGG - chr6_1:52960792-52960811 Msa0888460:intron 25.0%
! CGTAAAAATAGTGAGATTTA+GGG - chr6_1:52960793-52960812 Msa0888460:intron 25.0%
! ATTCCCAATATTATGAAGTT+TGG + chr6_1:52960923-52960942 None:intergenic 25.0%
!! CTTCATTGTGTTTAGAATTT+GGG - chr6_1:52960945-52960964 Msa0888460:intron 25.0%
! TACCACCAAAAAAAGAATTT+GGG - chr6_1:52961046-52961065 Msa0888460:intron 25.0%
!! ATCTGAAATCAGATATATGA+AGG + chr6_1:52961103-52961122 None:intergenic 25.0%
! ACTTAATATATCATACTTGC+AGG - chr6_1:52961171-52961190 Msa0888460:CDS 25.0%
! CATATCAGACTAATCAAATT+AGG + chr6_1:52961502-52961521 None:intergenic 25.0%
!!! TAAAGGCATTTGTTTGTTTA+TGG - chr6_1:52961642-52961661 Msa0888460:five_prime_UTR 25.0%
! TAAATATAACACTCAGCAAA+TGG + chr6_1:52954232-52954251 None:intergenic 25.0%
! AAGGTTAAATAACAATACCA+CGG + chr6_1:52954585-52954604 None:intergenic 25.0%
!!! GTAATAATTTTGTGATTTGG+TGG - chr6_1:52954711-52954730 Msa0888460:intron 25.0%
! TGGTGGAATACAAAATTTAT+TGG - chr6_1:52954728-52954747 Msa0888460:intron 25.0%
!!! CTTCTATTTTGATGATTTAG+GGG - chr6_1:52954787-52954806 Msa0888460:intron 25.0%
! TAGTTATGGTTGTTAAATTG+TGG - chr6_1:52954830-52954849 Msa0888460:intron 25.0%
! TGTTAAATTGTGGATACTTA+AGG - chr6_1:52954840-52954859 Msa0888460:intron 25.0%
! GTTTAAAAAACATAAGGTAC+GGG + chr6_1:52955155-52955174 None:intergenic 25.0%
! TTGTATCGTATGATGATTTA+AGG - chr6_1:52955509-52955528 Msa0888460:intron 25.0%
! TGTATCGTATGATGATTTAA+GGG - chr6_1:52955510-52955529 Msa0888460:intron 25.0%
! TTAACTACGAGAATAAAATG+AGG + chr6_1:52955882-52955901 None:intergenic 25.0%
!! TCATTTTATTCTCGTAGTTA+AGG - chr6_1:52955881-52955900 Msa0888460:intron 25.0%
! TGTCACTAAATAACTTTATG+CGG + chr6_1:52955952-52955971 None:intergenic 25.0%
!! CATTTGTTAATTCATTTCTC+AGG + chr6_1:52956685-52956704 None:intergenic 25.0%
! GAAATACTATATGTAATGAG+AGG - chr6_1:52956771-52956790 Msa0888460:intron 25.0%
! CACAAGGAGAAAATAAAATT+CGG - chr6_1:52957059-52957078 Msa0888460:intron 25.0%
! AATAAAATTCGGCAAACATT+TGG - chr6_1:52957070-52957089 Msa0888460:intron 25.0%
!! TGCTTGTTTAGAATTCATTT+AGG - chr6_1:52957289-52957308 Msa0888460:intron 25.0%
!! AAAATGTTAATACCTTTTGG+AGG + chr6_1:52957323-52957342 None:intergenic 25.0%
! AACTGTAAACCTAGAAAAAA+AGG + chr6_1:52957362-52957381 None:intergenic 25.0%
!!! TTTTTTTCTAGGTTTACAGT+TGG - chr6_1:52957361-52957380 Msa0888460:intron 25.0%
!!! TTTTTTCTAGGTTTACAGTT+GGG - chr6_1:52957362-52957381 Msa0888460:intron 25.0%
! GTAGATAATTACCGATAAAT+AGG - chr6_1:52957388-52957407 Msa0888460:intron 25.0%
! CGATAAATAGGAGATTAAAT+TGG - chr6_1:52957400-52957419 Msa0888460:intron 25.0%
! CATATTCAATAAGTCAAAAC+AGG + chr6_1:52957510-52957529 None:intergenic 25.0%
! CTTATTGAATATGCTTAAGT+TGG - chr6_1:52957517-52957536 Msa0888460:intron 25.0%
! AATGCAGATATTCTCTATTA+GGG + chr6_1:52957558-52957577 None:intergenic 25.0%
! TAATGCAGATATTCTCTATT+AGG + chr6_1:52957559-52957578 None:intergenic 25.0%
! AATAGAGAATATCTGCATTA+CGG - chr6_1:52957559-52957578 Msa0888460:intron 25.0%
! ATTCTGTTAAAAGAAACAGT+GGG + chr6_1:52957648-52957667 None:intergenic 25.0%
! AATTCTGTTAAAAGAAACAG+TGG + chr6_1:52957649-52957668 None:intergenic 25.0%
! TGCTTGTAGAATTTGATTAA+CGG + chr6_1:52958042-52958061 None:intergenic 25.0%
!! AATAATTTTGTGGTAAGACT+AGG - chr6_1:52958124-52958143 Msa0888460:intron 25.0%
! ACTGTTTGTAAGTATTTCAT+AGG + chr6_1:52958182-52958201 None:intergenic 25.0%
! AAACTGTAAGTATGTGAAAA+TGG + chr6_1:52958214-52958233 None:intergenic 25.0%
! ATGCCATTAATATAAGAACA+GGG + chr6_1:52958305-52958324 None:intergenic 25.0%
! AATGCCATTAATATAAGAAC+AGG + chr6_1:52958306-52958325 None:intergenic 25.0%
! AATGAACATCAAGAAAATGA+AGG + chr6_1:52958353-52958372 None:intergenic 25.0%
! AATTATTGTTGAAGTCCAAA+AGG + chr6_1:52958404-52958423 None:intergenic 25.0%
!! ATTTAATATCCTCACACTTT+TGG - chr6_1:52958421-52958440 Msa0888460:intron 25.0%
!! TTTAATATCCTCACACTTTT+GGG - chr6_1:52958422-52958441 Msa0888460:intron 25.0%
! AAAGTTTGCATATCTTAACA+GGG - chr6_1:52958595-52958614 Msa0888460:intron 25.0%
!!! AATTATGACTTGCTACAAAA+AGG + chr6_1:52958640-52958659 None:intergenic 25.0%
!! TTTTTGTAGCAAGTCATAAT+TGG - chr6_1:52958639-52958658 Msa0888460:intron 25.0%
!! TTTTGCTAAAAAATTGACTG+AGG - chr6_1:52959048-52959067 Msa0888460:intron 25.0%
! TGTTAATGTAACCTAATTTG+TGG - chr6_1:52959075-52959094 Msa0888460:intron 25.0%
!! GAAAACAAAGAAGAAAGTAT+TGG - chr6_1:52959356-52959375 Msa0888460:intron 25.0%
! AATTTAGTGACTGCTTTAAT+TGG - chr6_1:52959647-52959666 Msa0888460:intron 25.0%
! CATACTCAGTTAAGAAATAA+TGG - chr6_1:52959674-52959693 Msa0888460:intron 25.0%
!! ACCATTGATGTCAAAATTTT+AGG + chr6_1:52959785-52959804 None:intergenic 25.0%
! CTCTTAATTCATAACTCAAT+TGG - chr6_1:52959835-52959854 Msa0888460:intron 25.0%
! ATTATCAACACTTTAACCAT+GGG + chr6_1:52959918-52959937 None:intergenic 25.0%
! TATTATCAACACTTTAACCA+TGG + chr6_1:52959919-52959938 None:intergenic 25.0%
!! TTTAGTTTCCAACAAAGAAA+AGG + chr6_1:52959986-52960005 None:intergenic 25.0%
!!! CTTAAGTGTTCTAAAAAGAA+TGG + chr6_1:52960514-52960533 None:intergenic 25.0%
! ACGTAAAAATAGTGAGATTT+AGG - chr6_1:52960792-52960811 Msa0888460:intron 25.0%
! CGTAAAAATAGTGAGATTTA+GGG - chr6_1:52960793-52960812 Msa0888460:intron 25.0%
! ATTCCCAATATTATGAAGTT+TGG + chr6_1:52960923-52960942 None:intergenic 25.0%
!! CTTCATTGTGTTTAGAATTT+GGG - chr6_1:52960945-52960964 Msa0888460:intron 25.0%
! TACCACCAAAAAAAGAATTT+GGG - chr6_1:52961046-52961065 Msa0888460:intron 25.0%
!! ATCTGAAATCAGATATATGA+AGG + chr6_1:52961103-52961122 None:intergenic 25.0%
! ACTTAATATATCATACTTGC+AGG - chr6_1:52961171-52961190 Msa0888460:CDS 25.0%
! CATATCAGACTAATCAAATT+AGG + chr6_1:52961502-52961521 None:intergenic 25.0%
!!! TAAAGGCATTTGTTTGTTTA+TGG - chr6_1:52961642-52961661 Msa0888460:five_prime_UTR 25.0%
AAGAAAGAAGAAAGAAGATG+AGG + chr6_1:52954049-52954068 None:intergenic 30.0%
AATTACATTTCTCTGACACA+TGG - chr6_1:52954346-52954365 Msa0888460:three_prime_UTR 30.0%
AGTTGTATAACATAGCAGAT+TGG + chr6_1:52954685-52954704 None:intergenic 30.0%
TGGATACTTAAGGAAAGATT+AGG - chr6_1:52954850-52954869 Msa0888460:intron 30.0%
TATGTTGTGAGAGAAATTTG+TGG - chr6_1:52954963-52954982 Msa0888460:intron 30.0%
AGTTGCAATGTAATTGAAGT+TGG - chr6_1:52955560-52955579 Msa0888460:CDS 30.0%
ACAAATGTCAAGTGTGTTAA+TGG - chr6_1:52955744-52955763 Msa0888460:intron 30.0%
!! ATGGTTGATTTGAATTCAGA+TGG - chr6_1:52955763-52955782 Msa0888460:intron 30.0%
ATGGTAAATTGTGACTTCTT+AGG - chr6_1:52955782-52955801 Msa0888460:intron 30.0%
!! AATGTGTTTCTAGAAGTAGA+TGG + chr6_1:52955927-52955946 None:intergenic 30.0%
TCACTAAATAACTTTATGCG+GGG + chr6_1:52955950-52955969 None:intergenic 30.0%
GTCACTAAATAACTTTATGC+GGG + chr6_1:52955951-52955970 None:intergenic 30.0%
AAAAAGAAAAAGGTTTCTGC+AGG - chr6_1:52956019-52956038 Msa0888460:intron 30.0%
! ACCTTGCACTCAATTTTTAT+CGG + chr6_1:52956077-52956096 None:intergenic 30.0%
! TTAGACTGTTGAGCTTTATA+TGG - chr6_1:52956145-52956164 Msa0888460:intron 30.0%
TATGTAGTGTTATACAGCTT+GGG + chr6_1:52956276-52956295 None:intergenic 30.0%
CTAACTCATCCTTACAAAAT+CGG - chr6_1:52956519-52956538 Msa0888460:intron 30.0%
! TCATTATAGTTTCTAGAGAG+TGG + chr6_1:52956563-52956582 None:intergenic 30.0%
! ACTCTCTAGAAACTATAATG+AGG - chr6_1:52956562-52956581 Msa0888460:intron 30.0%
! GCCTTATCTTTTATCAATGT+GGG - chr6_1:52956584-52956603 Msa0888460:intron 30.0%
TCCCACATTGATAAAAGATA+AGG + chr6_1:52956588-52956607 None:intergenic 30.0%
AATCTTGGATGAAAGTTCTT+GGG + chr6_1:52956622-52956641 None:intergenic 30.0%
AAATCTTGGATGAAAGTTCT+TGG + chr6_1:52956623-52956642 None:intergenic 30.0%
! TTTCAAAGTAATGTCACTTC+AGG + chr6_1:52956647-52956666 None:intergenic 30.0%
!! AGTATTTCTAGACACATGAA+AGG + chr6_1:52956759-52956778 None:intergenic 30.0%
!! ATAAGAAGTAAAAAGTACCC+AGG - chr6_1:52956823-52956842 Msa0888460:intron 30.0%
AACAAGTAGAACTGTTATTG+AGG - chr6_1:52957023-52957042 Msa0888460:CDS 30.0%
!! AGGTACTAATTTGTTTCACA+AGG - chr6_1:52957043-52957062 Msa0888460:CDS 30.0%
CATGTAACTTTCTTACATGA+AGG - chr6_1:52957186-52957205 Msa0888460:intron 30.0%
TAAATGCTAAAACCATAGTC+AGG - chr6_1:52957229-52957248 Msa0888460:intron 30.0%
AAATGCTAAAACCATAGTCA+GGG - chr6_1:52957230-52957249 Msa0888460:intron 30.0%
CTGATAGTTTGATTAACACA+TGG + chr6_1:52957452-52957471 None:intergenic 30.0%
ATATGAAGATGAAGGATGAA+AGG + chr6_1:52957717-52957736 None:intergenic 30.0%
CCAGATTTATATGAAGATGA+AGG + chr6_1:52957725-52957744 None:intergenic 30.0%
CCTTCATCTTCATATAAATC+TGG - chr6_1:52957722-52957741 Msa0888460:intron 30.0%
!! GATTGTGGCATATCATTTTT+AGG - chr6_1:52957850-52957869 Msa0888460:intron 30.0%
!!! TGTATTGATTTTCCTGTTCT+TGG - chr6_1:52958005-52958024 Msa0888460:intron 30.0%
!!! GTATTGATTTTCCTGTTCTT+GGG - chr6_1:52958006-52958025 Msa0888460:intron 30.0%
CTTGTAGAATTTGATTAACG+GGG + chr6_1:52958040-52958059 None:intergenic 30.0%
GCTTGTAGAATTTGATTAAC+GGG + chr6_1:52958041-52958060 None:intergenic 30.0%
!! ATATATTTTCAAGCAAAGCC+CGG - chr6_1:52958070-52958089 Msa0888460:intron 30.0%
TGACCCTGTTCTTATATTAA+TGG - chr6_1:52958299-52958318 Msa0888460:intron 30.0%
TCAATTGAGCAAACAAATCA+TGG + chr6_1:52958490-52958509 None:intergenic 30.0%
CAAAGTTTGCATATCTTAAC+AGG - chr6_1:52958594-52958613 Msa0888460:intron 30.0%
CATATTATTGTTTGCAGGAA+TGG - chr6_1:52958924-52958943 Msa0888460:intron 30.0%
! TTTTCTGTCGCACTTTTATT+CGG - chr6_1:52959126-52959145 Msa0888460:intron 30.0%
! GAATTTTCTTCAATAAACGC+AGG + chr6_1:52959275-52959294 None:intergenic 30.0%
TGAAGATAACGAATCACAAA+AGG - chr6_1:52959415-52959434 Msa0888460:intron 30.0%
AAGGTGGAAAATAATGAGAA+TGG - chr6_1:52959434-52959453 Msa0888460:intron 30.0%
AACAATCTCCAATCTGTAAA+AGG + chr6_1:52959483-52959502 None:intergenic 30.0%
!! GCCTAAAATTTTGACATCAA+TGG - chr6_1:52959781-52959800 Msa0888460:intron 30.0%
GAATAAATAAGCCAGCAAAT+AGG + chr6_1:52959872-52959891 None:intergenic 30.0%
TGCTACAAACATTCTTATTC+CGG + chr6_1:52960381-52960400 None:intergenic 30.0%
GAGAATCTGTGACTTATTAA+AGG - chr6_1:52960415-52960434 Msa0888460:intron 30.0%
! TGTTGATTACAATTCATTGC+AGG - chr6_1:52960576-52960595 Msa0888460:intron 30.0%
! TAGCTTGTATTTGTATTAGG+AGG + chr6_1:52960773-52960792 None:intergenic 30.0%
! ACGTAGCTTGTATTTGTATT+AGG + chr6_1:52960776-52960795 None:intergenic 30.0%
! TTTAGGGTTTAGTTAAAAGC+TGG - chr6_1:52960809-52960828 Msa0888460:intron 30.0%
!!! ACAGCATTTCATTTTTTTCG+TGG - chr6_1:52960885-52960904 Msa0888460:intron 30.0%
! GCTTCATTGTGTTTAGAATT+TGG - chr6_1:52960944-52960963 Msa0888460:intron 30.0%
GACAATGCATAATATATGCA+AGG - chr6_1:52961003-52961022 Msa0888460:intron 30.0%
CATAATATATGCAAGGTCTA+GGG - chr6_1:52961010-52961029 Msa0888460:intron 30.0%
CTACCACCAAAAAAAGAATT+TGG - chr6_1:52961045-52961064 Msa0888460:intron 30.0%
TGAAATCAGATATATGAAGG+TGG + chr6_1:52961100-52961119 None:intergenic 30.0%
! TATATCATTGAGTTGTCTCT+CGG + chr6_1:52961215-52961234 None:intergenic 30.0%
CAAAAATTACACAACCTCAT+TGG + chr6_1:52961397-52961416 None:intergenic 30.0%
AAGAAAGAAGAAAGAAGATG+AGG + chr6_1:52954049-52954068 None:intergenic 30.0%
AATTACATTTCTCTGACACA+TGG - chr6_1:52954346-52954365 Msa0888460:three_prime_UTR 30.0%
AGTTGTATAACATAGCAGAT+TGG + chr6_1:52954685-52954704 None:intergenic 30.0%
TGGATACTTAAGGAAAGATT+AGG - chr6_1:52954850-52954869 Msa0888460:intron 30.0%
TATGTTGTGAGAGAAATTTG+TGG - chr6_1:52954963-52954982 Msa0888460:intron 30.0%
AGTTGCAATGTAATTGAAGT+TGG - chr6_1:52955560-52955579 Msa0888460:CDS 30.0%
ACAAATGTCAAGTGTGTTAA+TGG - chr6_1:52955744-52955763 Msa0888460:intron 30.0%
!! ATGGTTGATTTGAATTCAGA+TGG - chr6_1:52955763-52955782 Msa0888460:intron 30.0%
ATGGTAAATTGTGACTTCTT+AGG - chr6_1:52955782-52955801 Msa0888460:intron 30.0%
!! AATGTGTTTCTAGAAGTAGA+TGG + chr6_1:52955927-52955946 None:intergenic 30.0%
TCACTAAATAACTTTATGCG+GGG + chr6_1:52955950-52955969 None:intergenic 30.0%
GTCACTAAATAACTTTATGC+GGG + chr6_1:52955951-52955970 None:intergenic 30.0%
AAAAAGAAAAAGGTTTCTGC+AGG - chr6_1:52956019-52956038 Msa0888460:intron 30.0%
! ACCTTGCACTCAATTTTTAT+CGG + chr6_1:52956077-52956096 None:intergenic 30.0%
! TTAGACTGTTGAGCTTTATA+TGG - chr6_1:52956145-52956164 Msa0888460:intron 30.0%
TATGTAGTGTTATACAGCTT+GGG + chr6_1:52956276-52956295 None:intergenic 30.0%
CTAACTCATCCTTACAAAAT+CGG - chr6_1:52956519-52956538 Msa0888460:intron 30.0%
! TCATTATAGTTTCTAGAGAG+TGG + chr6_1:52956563-52956582 None:intergenic 30.0%
! ACTCTCTAGAAACTATAATG+AGG - chr6_1:52956562-52956581 Msa0888460:intron 30.0%
! GCCTTATCTTTTATCAATGT+GGG - chr6_1:52956584-52956603 Msa0888460:intron 30.0%
TCCCACATTGATAAAAGATA+AGG + chr6_1:52956588-52956607 None:intergenic 30.0%
AATCTTGGATGAAAGTTCTT+GGG + chr6_1:52956622-52956641 None:intergenic 30.0%
AAATCTTGGATGAAAGTTCT+TGG + chr6_1:52956623-52956642 None:intergenic 30.0%
! TTTCAAAGTAATGTCACTTC+AGG + chr6_1:52956647-52956666 None:intergenic 30.0%
!! AGTATTTCTAGACACATGAA+AGG + chr6_1:52956759-52956778 None:intergenic 30.0%
!! ATAAGAAGTAAAAAGTACCC+AGG - chr6_1:52956823-52956842 Msa0888460:intron 30.0%
AACAAGTAGAACTGTTATTG+AGG - chr6_1:52957023-52957042 Msa0888460:CDS 30.0%
!! AGGTACTAATTTGTTTCACA+AGG - chr6_1:52957043-52957062 Msa0888460:CDS 30.0%
CATGTAACTTTCTTACATGA+AGG - chr6_1:52957186-52957205 Msa0888460:intron 30.0%
TAAATGCTAAAACCATAGTC+AGG - chr6_1:52957229-52957248 Msa0888460:intron 30.0%
AAATGCTAAAACCATAGTCA+GGG - chr6_1:52957230-52957249 Msa0888460:intron 30.0%
CTGATAGTTTGATTAACACA+TGG + chr6_1:52957452-52957471 None:intergenic 30.0%
ATATGAAGATGAAGGATGAA+AGG + chr6_1:52957717-52957736 None:intergenic 30.0%
CCAGATTTATATGAAGATGA+AGG + chr6_1:52957725-52957744 None:intergenic 30.0%
CCTTCATCTTCATATAAATC+TGG - chr6_1:52957722-52957741 Msa0888460:intron 30.0%
!! GATTGTGGCATATCATTTTT+AGG - chr6_1:52957850-52957869 Msa0888460:intron 30.0%
!!! TGTATTGATTTTCCTGTTCT+TGG - chr6_1:52958005-52958024 Msa0888460:intron 30.0%
!!! GTATTGATTTTCCTGTTCTT+GGG - chr6_1:52958006-52958025 Msa0888460:intron 30.0%
CTTGTAGAATTTGATTAACG+GGG + chr6_1:52958040-52958059 None:intergenic 30.0%
GCTTGTAGAATTTGATTAAC+GGG + chr6_1:52958041-52958060 None:intergenic 30.0%
!! ATATATTTTCAAGCAAAGCC+CGG - chr6_1:52958070-52958089 Msa0888460:intron 30.0%
TGACCCTGTTCTTATATTAA+TGG - chr6_1:52958299-52958318 Msa0888460:intron 30.0%
TCAATTGAGCAAACAAATCA+TGG + chr6_1:52958490-52958509 None:intergenic 30.0%
CAAAGTTTGCATATCTTAAC+AGG - chr6_1:52958594-52958613 Msa0888460:intron 30.0%
CATATTATTGTTTGCAGGAA+TGG - chr6_1:52958924-52958943 Msa0888460:intron 30.0%
! TTTTCTGTCGCACTTTTATT+CGG - chr6_1:52959126-52959145 Msa0888460:intron 30.0%
! GAATTTTCTTCAATAAACGC+AGG + chr6_1:52959275-52959294 None:intergenic 30.0%
TGAAGATAACGAATCACAAA+AGG - chr6_1:52959415-52959434 Msa0888460:intron 30.0%
AAGGTGGAAAATAATGAGAA+TGG - chr6_1:52959434-52959453 Msa0888460:intron 30.0%
AACAATCTCCAATCTGTAAA+AGG + chr6_1:52959483-52959502 None:intergenic 30.0%
!! GCCTAAAATTTTGACATCAA+TGG - chr6_1:52959781-52959800 Msa0888460:intron 30.0%
GAATAAATAAGCCAGCAAAT+AGG + chr6_1:52959872-52959891 None:intergenic 30.0%
TGCTACAAACATTCTTATTC+CGG + chr6_1:52960381-52960400 None:intergenic 30.0%
GAGAATCTGTGACTTATTAA+AGG - chr6_1:52960415-52960434 Msa0888460:intron 30.0%
! TGTTGATTACAATTCATTGC+AGG - chr6_1:52960576-52960595 Msa0888460:intron 30.0%
! TAGCTTGTATTTGTATTAGG+AGG + chr6_1:52960773-52960792 None:intergenic 30.0%
! ACGTAGCTTGTATTTGTATT+AGG + chr6_1:52960776-52960795 None:intergenic 30.0%
! TTTAGGGTTTAGTTAAAAGC+TGG - chr6_1:52960809-52960828 Msa0888460:intron 30.0%
!!! ACAGCATTTCATTTTTTTCG+TGG - chr6_1:52960885-52960904 Msa0888460:intron 30.0%
! GCTTCATTGTGTTTAGAATT+TGG - chr6_1:52960944-52960963 Msa0888460:intron 30.0%
GACAATGCATAATATATGCA+AGG - chr6_1:52961003-52961022 Msa0888460:intron 30.0%
CATAATATATGCAAGGTCTA+GGG - chr6_1:52961010-52961029 Msa0888460:intron 30.0%
CTACCACCAAAAAAAGAATT+TGG - chr6_1:52961045-52961064 Msa0888460:intron 30.0%
TGAAATCAGATATATGAAGG+TGG + chr6_1:52961100-52961119 None:intergenic 30.0%
! TATATCATTGAGTTGTCTCT+CGG + chr6_1:52961215-52961234 None:intergenic 30.0%
CAAAAATTACACAACCTCAT+TGG + chr6_1:52961397-52961416 None:intergenic 30.0%
ACGAAGTAGACAAATCCAAA+AGG - chr6_1:52954015-52954034 Msa0888460:three_prime_UTR 35.0%
AGTAGACAAATCCAAAAGGA+AGG - chr6_1:52954019-52954038 Msa0888460:three_prime_UTR 35.0%
ATGTTAAGAGAGATGCATAG+TGG + chr6_1:52954084-52954103 None:intergenic 35.0%
GGATCGATAATCATCATAGT+TGG + chr6_1:52954124-52954143 None:intergenic 35.0%
TAGTTCTTACTACGAGATAC+CGG - chr6_1:52954273-52954292 Msa0888460:three_prime_UTR 35.0%
GACTGTTAGTTACTACTTAC+AGG - chr6_1:52954409-52954428 Msa0888460:exon 35.0%
CAGATAATAATCGTTCAACG+TGG - chr6_1:52954478-52954497 Msa0888460:CDS 35.0%
AGGGGTGAAGTTATGAAAAT+TGG - chr6_1:52954805-52954824 Msa0888460:intron 35.0%
! AAATGTTGAAGTACCCGTAT+TGG - chr6_1:52954915-52954934 Msa0888460:intron 35.0%
! AATGTTGAAGTACCCGTATT+GGG - chr6_1:52954916-52954935 Msa0888460:intron 35.0%
TACCAAGTATGTACCCAATA+CGG + chr6_1:52954932-52954951 None:intergenic 35.0%
TCTCACAACATAACAAGTAC+CGG + chr6_1:52954955-52954974 None:intergenic 35.0%
! GAATCCTTGGTTGATGTTAT+TGG - chr6_1:52955199-52955218 Msa0888460:intron 35.0%
! GATGTTATTGGCTGTAATTG+CGG - chr6_1:52955211-52955230 Msa0888460:intron 35.0%
TCATCAACAGAATCTCTACT+TGG + chr6_1:52955252-52955271 None:intergenic 35.0%
AAGTAGAGATTCTGTTGATG+AGG - chr6_1:52955251-52955270 Msa0888460:intron 35.0%
ACCTTTCCAGAATCTTTACT+CGG + chr6_1:52955314-52955333 None:intergenic 35.0%
AATAACCACAGAATTGCAAG+AGG + chr6_1:52955387-52955406 None:intergenic 35.0%
!!! ATGATTTTCGGGTGAAATTG+TGG - chr6_1:52955412-52955431 Msa0888460:intron 35.0%
! TAGTTTTTCACAAACCCAAG+AGG + chr6_1:52955647-52955666 None:intergenic 35.0%
GATTTGAGTGGTATGGAAAA+TGG + chr6_1:52955681-52955700 None:intergenic 35.0%
!! AACTGTTGATTTGAGTGGTA+TGG + chr6_1:52955688-52955707 None:intergenic 35.0%
!! ATGTCAACTGTTGATTTGAG+TGG + chr6_1:52955693-52955712 None:intergenic 35.0%
! GAGGTATTTCACATGACATT+TGG + chr6_1:52955863-52955882 None:intergenic 35.0%
! TTCTAGAAGTAGATGGATGA+AGG + chr6_1:52955920-52955939 None:intergenic 35.0%
AAAGGTTTCTGCAGGTTTAT+AGG - chr6_1:52956027-52956046 Msa0888460:intron 35.0%
! CCTTGCACTCAATTTTTATC+GGG + chr6_1:52956076-52956095 None:intergenic 35.0%
! AAGCTCAACAGTCTAAAGTA+GGG + chr6_1:52956141-52956160 None:intergenic 35.0%
! AAAGCTCAACAGTCTAAAGT+AGG + chr6_1:52956142-52956161 None:intergenic 35.0%
CTATGTAGTGTTATACAGCT+TGG + chr6_1:52956277-52956296 None:intergenic 35.0%
CAAGCTGTATAACACTACAT+AGG - chr6_1:52956275-52956294 Msa0888460:CDS 35.0%
! ATAGGCTCTGATATCATCTT+AGG - chr6_1:52956482-52956501 Msa0888460:CDS 35.0%
! CGATTTTGTAAGGATGAGTT+AGG + chr6_1:52956521-52956540 None:intergenic 35.0%
!! GGCCTTATCTTTTATCAATG+TGG - chr6_1:52956583-52956602 Msa0888460:intron 35.0%
! TCTTTTATCAATGTGGGACT+TGG - chr6_1:52956590-52956609 Msa0888460:intron 35.0%
! ATGTCACTTCAGGAAAATCT+TGG + chr6_1:52956637-52956656 None:intergenic 35.0%
! ATGCAAATTTTGCGACTTCT+TGG - chr6_1:52956702-52956721 Msa0888460:CDS 35.0%
! TCTTCACAAGTTTGTTTCTC+CGG + chr6_1:52956861-52956880 None:intergenic 35.0%
!! GGCTTCTCATTTTTCTTTAC+AGG + chr6_1:52956928-52956947 None:intergenic 35.0%
TATTTCCTCAAATGGGTGAT+AGG + chr6_1:52956953-52956972 None:intergenic 35.0%
!!! TCAGTGCTATTTTTGTACGA+CGG - chr6_1:52957103-52957122 Msa0888460:intron 35.0%
ATCATGTAAATCAAGCAGTG+TGG + chr6_1:52957139-52957158 None:intergenic 35.0%
ACACTGCTTGATTTACATGA+TGG - chr6_1:52957138-52957157 Msa0888460:intron 35.0%
AGTTACATGCTTTGTAGCAT+AGG + chr6_1:52957175-52957194 None:intergenic 35.0%
!!! GGAAGAACACCTTTTTTTCT+AGG - chr6_1:52957350-52957369 Msa0888460:intron 35.0%
TGCACTAGAAAGGAAAATTC+TGG + chr6_1:52957486-52957505 None:intergenic 35.0%
! CATTTTCATTGCATCAGTTG+AGG + chr6_1:52957753-52957772 None:intergenic 35.0%
! TGTATAGCTGATGATGATTG+TGG - chr6_1:52957835-52957854 Msa0888460:intron 35.0%
TCTGTCAAATATGGCAAATC+TGG + chr6_1:52957944-52957963 None:intergenic 35.0%
CCATGTTCATCTGTCAAATA+TGG + chr6_1:52957953-52957972 None:intergenic 35.0%
CCATATTTGACAGATGAACA+TGG - chr6_1:52957950-52957969 Msa0888460:intron 35.0%
ATGAACATGGAAGTAAGTGA+TGG - chr6_1:52957963-52957982 Msa0888460:intron 35.0%
CAGGAAAATCAATACAGTGT+AGG + chr6_1:52958001-52958020 None:intergenic 35.0%
TCTAACCTTGTAGATAATGC+TGG - chr6_1:52958149-52958168 Msa0888460:intron 35.0%
! TGTCTACTTGTTAGAGTAGA+AGG + chr6_1:52958247-52958266 None:intergenic 35.0%
ACAAGTAGACATGTACTTTG+AGG - chr6_1:52958256-52958275 Msa0888460:intron 35.0%
AGGAAAACTCACCATACATT+CGG - chr6_1:52958276-52958295 Msa0888460:intron 35.0%
!! AACTGTAATTTGCCACCTTT+TGG - chr6_1:52958386-52958405 Msa0888460:intron 35.0%
TATTGTTGAAGTCCAAAAGG+TGG + chr6_1:52958401-52958420 None:intergenic 35.0%
GAGCAAACAAATCATGGATA+AGG + chr6_1:52958484-52958503 None:intergenic 35.0%
TGCATATCTTAACAGGGTTA+TGG - chr6_1:52958601-52958620 Msa0888460:intron 35.0%
! GTCCATCAGAAATTGACTTT+GGG - chr6_1:52958703-52958722 Msa0888460:CDS 35.0%
ATCCCAAAGTCAATTTCTGA+TGG + chr6_1:52958708-52958727 None:intergenic 35.0%
!! AGAAATTGACTTTGGGATTG+AGG - chr6_1:52958710-52958729 Msa0888460:CDS 35.0%
TGAAAATGAAGACGAGAATG+AGG - chr6_1:52958791-52958810 Msa0888460:CDS 35.0%
!! GTAACCTAATTTGTGGCTTT+TGG - chr6_1:52959082-52959101 Msa0888460:intron 35.0%
! GAATAAAAGTGCGACAGAAA+AGG + chr6_1:52959127-52959146 None:intergenic 35.0%
! CGCACTTTTATTCGGTTTAT+TGG - chr6_1:52959134-52959153 Msa0888460:intron 35.0%
CTTCAGATGATCCAATTGAT+TGG - chr6_1:52959204-52959223 Msa0888460:intron 35.0%
AGATGATCCAATTGATTGGA+TGG - chr6_1:52959208-52959227 Msa0888460:intron 35.0%
TTTACTAATTTCGGCAGTAC+TGG + chr6_1:52959330-52959349 None:intergenic 35.0%
!! GAAAGTATTGGTGCGATTAA+TGG - chr6_1:52959368-52959387 Msa0888460:intron 35.0%
AGATAACGAATCACAAAAGG+TGG - chr6_1:52959418-52959437 Msa0888460:intron 35.0%
! ATTCAAGTGTTTTCTGCACA+CGG - chr6_1:52959506-52959525 Msa0888460:intron 35.0%
ATACAAGTCAGCTAACTTAC+GGG + chr6_1:52959536-52959555 None:intergenic 35.0%
CATACAAGTCAGCTAACTTA+CGG + chr6_1:52959537-52959556 None:intergenic 35.0%
CAAAGTGCATGATCAACTTT+AGG + chr6_1:52959594-52959613 None:intergenic 35.0%
! GAAATATCTGAAGTTGTTGC+AGG + chr6_1:52959816-52959835 None:intergenic 35.0%
TAATCAACGATCCTATTTGC+TGG - chr6_1:52959858-52959877 Msa0888460:intron 35.0%
! TTTATGTTCTGATTTTGCGC+AGG - chr6_1:52960006-52960025 Msa0888460:intron 35.0%
ATATCTCATTTGAAAGCTGC+TGG - chr6_1:52960097-52960116 Msa0888460:intron 35.0%
TATCCAACAGAGAGACTTAA+GGG + chr6_1:52960146-52960165 None:intergenic 35.0%
ATATCCAACAGAGAGACTTA+AGG + chr6_1:52960147-52960166 None:intergenic 35.0%
CATCAAAGACAACATGTCAA+GGG + chr6_1:52960202-52960221 None:intergenic 35.0%
CATTTCACTACTATAGATGC+CGG - chr6_1:52960359-52960378 Msa0888460:intron 35.0%
AAAGAATGGAACAGATGACA+AGG + chr6_1:52960500-52960519 None:intergenic 35.0%
GAACACTTAAGTACAAGCAT+TGG - chr6_1:52960523-52960542 Msa0888460:intron 35.0%
TGATTACAATTCATTGCAGG+AGG - chr6_1:52960579-52960598 Msa0888460:intron 35.0%
CAAGTTCAAACACTGAGATT+CGG - chr6_1:52960658-52960677 Msa0888460:intron 35.0%
TGAGATTCGGATTCAAGAAA+AGG - chr6_1:52960671-52960690 Msa0888460:intron 35.0%
GAGATTCGGATTCAAGAAAA+GGG - chr6_1:52960672-52960691 Msa0888460:intron 35.0%
!! AAAGCTGGTTCGAAATAAAG+TGG - chr6_1:52960824-52960843 Msa0888460:intron 35.0%
GCATAATATATGCAAGGTCT+AGG - chr6_1:52961009-52961028 Msa0888460:intron 35.0%
!!! ATTCTTTTTTTGGTGGTAGC+CGG + chr6_1:52961044-52961063 None:intergenic 35.0%
!!! AGCCCAAATTCTTTTTTTGG+TGG + chr6_1:52961051-52961070 None:intergenic 35.0%
!!! CTCAGCCCAAATTCTTTTTT+TGG + chr6_1:52961054-52961073 None:intergenic 35.0%
!! TGTTGCTTTGGATGATTTCT+TGG + chr6_1:52961244-52961263 None:intergenic 35.0%
!!! TGCTTCGTTTTTTGTTGCTT+TGG + chr6_1:52961256-52961275 None:intergenic 35.0%
! TTCGCTCGTGAAATTTTGTA+TGG - chr6_1:52961306-52961325 Msa0888460:intron 35.0%
! TTGTATGGCTTGTATGACTT+TGG - chr6_1:52961321-52961340 Msa0888460:intron 35.0%
TCACTTCTGTACACAATCAT+TGG + chr6_1:52961347-52961366 None:intergenic 35.0%
ATGATTGTGTACAGAAGTGA+AGG - chr6_1:52961347-52961366 Msa0888460:intron 35.0%
ACGAAGTAGACAAATCCAAA+AGG - chr6_1:52954015-52954034 Msa0888460:three_prime_UTR 35.0%
AGTAGACAAATCCAAAAGGA+AGG - chr6_1:52954019-52954038 Msa0888460:three_prime_UTR 35.0%
ATGTTAAGAGAGATGCATAG+TGG + chr6_1:52954084-52954103 None:intergenic 35.0%
GGATCGATAATCATCATAGT+TGG + chr6_1:52954124-52954143 None:intergenic 35.0%
TAGTTCTTACTACGAGATAC+CGG - chr6_1:52954273-52954292 Msa0888460:three_prime_UTR 35.0%
GACTGTTAGTTACTACTTAC+AGG - chr6_1:52954409-52954428 Msa0888460:exon 35.0%
CAGATAATAATCGTTCAACG+TGG - chr6_1:52954478-52954497 Msa0888460:CDS 35.0%
AGGGGTGAAGTTATGAAAAT+TGG - chr6_1:52954805-52954824 Msa0888460:intron 35.0%
! AAATGTTGAAGTACCCGTAT+TGG - chr6_1:52954915-52954934 Msa0888460:intron 35.0%
! AATGTTGAAGTACCCGTATT+GGG - chr6_1:52954916-52954935 Msa0888460:intron 35.0%
TACCAAGTATGTACCCAATA+CGG + chr6_1:52954932-52954951 None:intergenic 35.0%
TCTCACAACATAACAAGTAC+CGG + chr6_1:52954955-52954974 None:intergenic 35.0%
! GAATCCTTGGTTGATGTTAT+TGG - chr6_1:52955199-52955218 Msa0888460:intron 35.0%
! GATGTTATTGGCTGTAATTG+CGG - chr6_1:52955211-52955230 Msa0888460:intron 35.0%
TCATCAACAGAATCTCTACT+TGG + chr6_1:52955252-52955271 None:intergenic 35.0%
AAGTAGAGATTCTGTTGATG+AGG - chr6_1:52955251-52955270 Msa0888460:intron 35.0%
ACCTTTCCAGAATCTTTACT+CGG + chr6_1:52955314-52955333 None:intergenic 35.0%
AATAACCACAGAATTGCAAG+AGG + chr6_1:52955387-52955406 None:intergenic 35.0%
!!! ATGATTTTCGGGTGAAATTG+TGG - chr6_1:52955412-52955431 Msa0888460:intron 35.0%
! TAGTTTTTCACAAACCCAAG+AGG + chr6_1:52955647-52955666 None:intergenic 35.0%
GATTTGAGTGGTATGGAAAA+TGG + chr6_1:52955681-52955700 None:intergenic 35.0%
!! AACTGTTGATTTGAGTGGTA+TGG + chr6_1:52955688-52955707 None:intergenic 35.0%
!! ATGTCAACTGTTGATTTGAG+TGG + chr6_1:52955693-52955712 None:intergenic 35.0%
! GAGGTATTTCACATGACATT+TGG + chr6_1:52955863-52955882 None:intergenic 35.0%
! TTCTAGAAGTAGATGGATGA+AGG + chr6_1:52955920-52955939 None:intergenic 35.0%
AAAGGTTTCTGCAGGTTTAT+AGG - chr6_1:52956027-52956046 Msa0888460:intron 35.0%
! CCTTGCACTCAATTTTTATC+GGG + chr6_1:52956076-52956095 None:intergenic 35.0%
! AAGCTCAACAGTCTAAAGTA+GGG + chr6_1:52956141-52956160 None:intergenic 35.0%
! AAAGCTCAACAGTCTAAAGT+AGG + chr6_1:52956142-52956161 None:intergenic 35.0%
CTATGTAGTGTTATACAGCT+TGG + chr6_1:52956277-52956296 None:intergenic 35.0%
CAAGCTGTATAACACTACAT+AGG - chr6_1:52956275-52956294 Msa0888460:CDS 35.0%
! ATAGGCTCTGATATCATCTT+AGG - chr6_1:52956482-52956501 Msa0888460:CDS 35.0%
! CGATTTTGTAAGGATGAGTT+AGG + chr6_1:52956521-52956540 None:intergenic 35.0%
!! GGCCTTATCTTTTATCAATG+TGG - chr6_1:52956583-52956602 Msa0888460:intron 35.0%
! TCTTTTATCAATGTGGGACT+TGG - chr6_1:52956590-52956609 Msa0888460:intron 35.0%
! ATGTCACTTCAGGAAAATCT+TGG + chr6_1:52956637-52956656 None:intergenic 35.0%
! ATGCAAATTTTGCGACTTCT+TGG - chr6_1:52956702-52956721 Msa0888460:CDS 35.0%
! TCTTCACAAGTTTGTTTCTC+CGG + chr6_1:52956861-52956880 None:intergenic 35.0%
!! GGCTTCTCATTTTTCTTTAC+AGG + chr6_1:52956928-52956947 None:intergenic 35.0%
TATTTCCTCAAATGGGTGAT+AGG + chr6_1:52956953-52956972 None:intergenic 35.0%
!!! TCAGTGCTATTTTTGTACGA+CGG - chr6_1:52957103-52957122 Msa0888460:intron 35.0%
ATCATGTAAATCAAGCAGTG+TGG + chr6_1:52957139-52957158 None:intergenic 35.0%
ACACTGCTTGATTTACATGA+TGG - chr6_1:52957138-52957157 Msa0888460:intron 35.0%
AGTTACATGCTTTGTAGCAT+AGG + chr6_1:52957175-52957194 None:intergenic 35.0%
!!! GGAAGAACACCTTTTTTTCT+AGG - chr6_1:52957350-52957369 Msa0888460:intron 35.0%
TGCACTAGAAAGGAAAATTC+TGG + chr6_1:52957486-52957505 None:intergenic 35.0%
! CATTTTCATTGCATCAGTTG+AGG + chr6_1:52957753-52957772 None:intergenic 35.0%
! TGTATAGCTGATGATGATTG+TGG - chr6_1:52957835-52957854 Msa0888460:intron 35.0%
TCTGTCAAATATGGCAAATC+TGG + chr6_1:52957944-52957963 None:intergenic 35.0%
CCATGTTCATCTGTCAAATA+TGG + chr6_1:52957953-52957972 None:intergenic 35.0%
CCATATTTGACAGATGAACA+TGG - chr6_1:52957950-52957969 Msa0888460:intron 35.0%
ATGAACATGGAAGTAAGTGA+TGG - chr6_1:52957963-52957982 Msa0888460:intron 35.0%
CAGGAAAATCAATACAGTGT+AGG + chr6_1:52958001-52958020 None:intergenic 35.0%
TCTAACCTTGTAGATAATGC+TGG - chr6_1:52958149-52958168 Msa0888460:intron 35.0%
! TGTCTACTTGTTAGAGTAGA+AGG + chr6_1:52958247-52958266 None:intergenic 35.0%
ACAAGTAGACATGTACTTTG+AGG - chr6_1:52958256-52958275 Msa0888460:intron 35.0%
AGGAAAACTCACCATACATT+CGG - chr6_1:52958276-52958295 Msa0888460:intron 35.0%
!! AACTGTAATTTGCCACCTTT+TGG - chr6_1:52958386-52958405 Msa0888460:intron 35.0%
TATTGTTGAAGTCCAAAAGG+TGG + chr6_1:52958401-52958420 None:intergenic 35.0%
GAGCAAACAAATCATGGATA+AGG + chr6_1:52958484-52958503 None:intergenic 35.0%
TGCATATCTTAACAGGGTTA+TGG - chr6_1:52958601-52958620 Msa0888460:intron 35.0%
! GTCCATCAGAAATTGACTTT+GGG - chr6_1:52958703-52958722 Msa0888460:CDS 35.0%
ATCCCAAAGTCAATTTCTGA+TGG + chr6_1:52958708-52958727 None:intergenic 35.0%
!! AGAAATTGACTTTGGGATTG+AGG - chr6_1:52958710-52958729 Msa0888460:CDS 35.0%
TGAAAATGAAGACGAGAATG+AGG - chr6_1:52958791-52958810 Msa0888460:CDS 35.0%
!! GTAACCTAATTTGTGGCTTT+TGG - chr6_1:52959082-52959101 Msa0888460:intron 35.0%
! GAATAAAAGTGCGACAGAAA+AGG + chr6_1:52959127-52959146 None:intergenic 35.0%
! CGCACTTTTATTCGGTTTAT+TGG - chr6_1:52959134-52959153 Msa0888460:intron 35.0%
CTTCAGATGATCCAATTGAT+TGG - chr6_1:52959204-52959223 Msa0888460:intron 35.0%
AGATGATCCAATTGATTGGA+TGG - chr6_1:52959208-52959227 Msa0888460:intron 35.0%
TTTACTAATTTCGGCAGTAC+TGG + chr6_1:52959330-52959349 None:intergenic 35.0%
!! GAAAGTATTGGTGCGATTAA+TGG - chr6_1:52959368-52959387 Msa0888460:intron 35.0%
AGATAACGAATCACAAAAGG+TGG - chr6_1:52959418-52959437 Msa0888460:intron 35.0%
! ATTCAAGTGTTTTCTGCACA+CGG - chr6_1:52959506-52959525 Msa0888460:intron 35.0%
ATACAAGTCAGCTAACTTAC+GGG + chr6_1:52959536-52959555 None:intergenic 35.0%
CATACAAGTCAGCTAACTTA+CGG + chr6_1:52959537-52959556 None:intergenic 35.0%
CAAAGTGCATGATCAACTTT+AGG + chr6_1:52959594-52959613 None:intergenic 35.0%
! GAAATATCTGAAGTTGTTGC+AGG + chr6_1:52959816-52959835 None:intergenic 35.0%
TAATCAACGATCCTATTTGC+TGG - chr6_1:52959858-52959877 Msa0888460:intron 35.0%
! TTTATGTTCTGATTTTGCGC+AGG - chr6_1:52960006-52960025 Msa0888460:intron 35.0%
ATATCTCATTTGAAAGCTGC+TGG - chr6_1:52960097-52960116 Msa0888460:intron 35.0%
TATCCAACAGAGAGACTTAA+GGG + chr6_1:52960146-52960165 None:intergenic 35.0%
ATATCCAACAGAGAGACTTA+AGG + chr6_1:52960147-52960166 None:intergenic 35.0%
CATCAAAGACAACATGTCAA+GGG + chr6_1:52960202-52960221 None:intergenic 35.0%
CATTTCACTACTATAGATGC+CGG - chr6_1:52960359-52960378 Msa0888460:intron 35.0%
AAAGAATGGAACAGATGACA+AGG + chr6_1:52960500-52960519 None:intergenic 35.0%
GAACACTTAAGTACAAGCAT+TGG - chr6_1:52960523-52960542 Msa0888460:intron 35.0%
TGATTACAATTCATTGCAGG+AGG - chr6_1:52960579-52960598 Msa0888460:intron 35.0%
CAAGTTCAAACACTGAGATT+CGG - chr6_1:52960658-52960677 Msa0888460:intron 35.0%
TGAGATTCGGATTCAAGAAA+AGG - chr6_1:52960671-52960690 Msa0888460:intron 35.0%
GAGATTCGGATTCAAGAAAA+GGG - chr6_1:52960672-52960691 Msa0888460:intron 35.0%
!! AAAGCTGGTTCGAAATAAAG+TGG - chr6_1:52960824-52960843 Msa0888460:intron 35.0%
GCATAATATATGCAAGGTCT+AGG - chr6_1:52961009-52961028 Msa0888460:intron 35.0%
!!! ATTCTTTTTTTGGTGGTAGC+CGG + chr6_1:52961044-52961063 None:intergenic 35.0%
!!! AGCCCAAATTCTTTTTTTGG+TGG + chr6_1:52961051-52961070 None:intergenic 35.0%
!!! CTCAGCCCAAATTCTTTTTT+TGG + chr6_1:52961054-52961073 None:intergenic 35.0%
!! TGTTGCTTTGGATGATTTCT+TGG + chr6_1:52961244-52961263 None:intergenic 35.0%
!!! TGCTTCGTTTTTTGTTGCTT+TGG + chr6_1:52961256-52961275 None:intergenic 35.0%
! TTCGCTCGTGAAATTTTGTA+TGG - chr6_1:52961306-52961325 Msa0888460:intron 35.0%
! TTGTATGGCTTGTATGACTT+TGG - chr6_1:52961321-52961340 Msa0888460:intron 35.0%
TCACTTCTGTACACAATCAT+TGG + chr6_1:52961347-52961366 None:intergenic 35.0%
ATGATTGTGTACAGAAGTGA+AGG - chr6_1:52961347-52961366 Msa0888460:intron 35.0%
TTAAGAGAGATGCATAGTGG+TGG + chr6_1:52954081-52954100 None:intergenic 40.0%
!! ATCGGTGTCAATGATGTATC+CGG + chr6_1:52954295-52954314 None:intergenic 40.0%
TAATCGTTCAACGTGGAATG+CGG - chr6_1:52954485-52954504 Msa0888460:CDS 40.0%
ACCAAGTATGTACCCAATAC+GGG + chr6_1:52954931-52954950 None:intergenic 40.0%
ATTGGGTACATACTTGGTAC+CGG - chr6_1:52954933-52954952 Msa0888460:intron 40.0%
GTACTCGTACAATGAATCCT+TGG - chr6_1:52955186-52955205 Msa0888460:intron 40.0%
ACAGCCAATAACATCAACCA+AGG + chr6_1:52955206-52955225 None:intergenic 40.0%
TTTACTCGGAGGTTATCATG+AGG + chr6_1:52955300-52955319 None:intergenic 40.0%
TAACCTCCGAGTAAAGATTC+TGG - chr6_1:52955305-52955324 Msa0888460:intron 40.0%
TTTCCAGAATCTTTACTCGG+AGG + chr6_1:52955311-52955330 None:intergenic 40.0%
! TCCGAGTAAAGATTCTGGAA+AGG - chr6_1:52955310-52955329 Msa0888460:intron 40.0%
!! CGTTTGCTGTAATGTAACTG+TGG - chr6_1:52955342-52955361 Msa0888460:intron 40.0%
TGCTGTAATGTAACTGTGGT+TGG - chr6_1:52955346-52955365 Msa0888460:intron 40.0%
TGTAATGTAACTGTGGTTGG+AGG - chr6_1:52955349-52955368 Msa0888460:intron 40.0%
GTAATGTAACTGTGGTTGGA+GGG - chr6_1:52955350-52955369 Msa0888460:intron 40.0%
ACTTTCCTCTTGCAATTCTG+TGG - chr6_1:52955379-52955398 Msa0888460:intron 40.0%
GGTGAAATTGTGGATGAATG+AGG - chr6_1:52955422-52955441 Msa0888460:intron 40.0%
AATAGTATAGTGCAGCCTCT+TGG - chr6_1:52955629-52955648 Msa0888460:CDS 40.0%
ATAGTATAGTGCAGCCTCTT+GGG - chr6_1:52955630-52955649 Msa0888460:CDS 40.0%
TGAGTGGTATGGAAAATGGT+AGG + chr6_1:52955677-52955696 None:intergenic 40.0%
CCCGATAAAAATTGAGTGCA+AGG - chr6_1:52956073-52956092 Msa0888460:intron 40.0%
ACCTGATCTAAACCATCTCA+TGG - chr6_1:52956111-52956130 Msa0888460:intron 40.0%
TCCATGAGATGGTTTAGATC+AGG + chr6_1:52956115-52956134 None:intergenic 40.0%
AACCCTCAACCTTACAAAAC+CGG - chr6_1:52956232-52956251 Msa0888460:CDS 40.0%
!! CCTTAAAAGCCGGTTTTGTA+AGG + chr6_1:52956244-52956263 None:intergenic 40.0%
!! CCTTACAAAACCGGCTTTTA+AGG - chr6_1:52956241-52956260 Msa0888460:CDS 40.0%
ACTACATAGGCCATATCTCT+AGG - chr6_1:52956288-52956307 Msa0888460:CDS 40.0%
! GCCATATCTCTAGGAAATGT+GGG - chr6_1:52956297-52956316 Msa0888460:CDS 40.0%
TCCCACATTTCCTAGAGATA+TGG + chr6_1:52956301-52956320 None:intergenic 40.0%
!!! TAATTGCGGCATTTTGGGTT+GGG + chr6_1:52956378-52956397 None:intergenic 40.0%
CTAGAAATTCCGCCTAATTG+CGG + chr6_1:52956392-52956411 None:intergenic 40.0%
CCTATCGTAGATCTGTTGTT+GGG + chr6_1:52956467-52956486 None:intergenic 40.0%
!! CCTTACAAGCCGATTTTGTA+AGG + chr6_1:52956531-52956550 None:intergenic 40.0%
!! CCTTACAAAATCGGCTTGTA+AGG - chr6_1:52956528-52956547 Msa0888460:intron 40.0%
! TTCACAAGTTTGTTTCTCCG+GGG + chr6_1:52956859-52956878 None:intergenic 40.0%
! CTTCACAAGTTTGTTTCTCC+GGG + chr6_1:52956860-52956879 None:intergenic 40.0%
! AGGCAGCTATTTCCTCAAAT+GGG + chr6_1:52956960-52956979 None:intergenic 40.0%
ATCCTCACTAATCTCCAATG+TGG + chr6_1:52956983-52957002 None:intergenic 40.0%
!! TGTTAATACCTTTTGGAGGC+AGG + chr6_1:52957319-52957338 None:intergenic 40.0%
TCATTGCATCAGTTGAGGTT+GGG + chr6_1:52957748-52957767 None:intergenic 40.0%
TTCATTGCATCAGTTGAGGT+TGG + chr6_1:52957749-52957768 None:intergenic 40.0%
GGTTAACAGCAAAGCAACAA+TGG - chr6_1:52957871-52957890 Msa0888460:intron 40.0%
GACTGCAAAATATCTTCACC+GGG + chr6_1:52958091-52958110 None:intergenic 40.0%
GGACTGCAAAATATCTTCAC+CGG + chr6_1:52958092-52958111 None:intergenic 40.0%
ACTCTCCAGCATTATCTACA+AGG + chr6_1:52958157-52958176 None:intergenic 40.0%
GTAGCAAGTCATAATTGGTG+TGG - chr6_1:52958644-52958663 Msa0888460:intron 40.0%
CATAATTGGTGTGGATACCA+TGG - chr6_1:52958653-52958672 Msa0888460:intron 40.0%
CATCTCAGAGATCATTTCCA+TGG + chr6_1:52958673-52958692 None:intergenic 40.0%
! CATGGAAATGATCTCTGAGA+TGG - chr6_1:52958671-52958690 Msa0888460:intron 40.0%
!! ATCTCTGAGATGGACTTATC+AGG - chr6_1:52958681-52958700 Msa0888460:CDS 40.0%
! GGTCCATCAGAAATTGACTT+TGG - chr6_1:52958702-52958721 Msa0888460:CDS 40.0%
CGAGAATGAGGATTATGACT+CGG - chr6_1:52958803-52958822 Msa0888460:CDS 40.0%
TTATTGTTTGCAGGAATGGC+TGG - chr6_1:52958928-52958947 Msa0888460:intron 40.0%
! GATGCGATTTTCTCATCCAA+TGG - chr6_1:52959024-52959043 Msa0888460:intron 40.0%
GTCTCCAAAAGCCACAAATT+AGG + chr6_1:52959089-52959108 None:intergenic 40.0%
GCAGATAGATGCTTCTGTAT+TGG + chr6_1:52959299-52959318 None:intergenic 40.0%
AAAAGGAAGTCTCGTCTGAA+GGG + chr6_1:52959466-52959485 None:intergenic 40.0%
TAAAAGGAAGTCTCGTCTGA+AGG + chr6_1:52959467-52959486 None:intergenic 40.0%
! CGAGACTTCCTTTTACAGAT+TGG - chr6_1:52959472-52959491 Msa0888460:intron 40.0%
! TGATCAACTTTAGGAGTTCC+TGG + chr6_1:52959585-52959604 None:intergenic 40.0%
TCAACACTTTAACCATGGGT+AGG + chr6_1:52959914-52959933 None:intergenic 40.0%
TCGTGTAGTCTTCTACTTCA+AGG + chr6_1:52960036-52960055 None:intergenic 40.0%
TCTCTCTGTTGGATATGCAA+GGG - chr6_1:52960151-52960170 Msa0888460:intron 40.0%
!! GATATGCAAGGGTATTCAAG+TGG - chr6_1:52960162-52960181 Msa0888460:intron 40.0%
GCATCAAAGACAACATGTCA+AGG + chr6_1:52960203-52960222 None:intergenic 40.0%
TTGCTAATTCCCCGGTTAAA+CGG - chr6_1:52960257-52960276 Msa0888460:intron 40.0%
AATGGAACAGATGACAAGGA+AGG + chr6_1:52960496-52960515 None:intergenic 40.0%
! TTTGACGTAAGGGTTTGTTC+AGG - chr6_1:52960631-52960650 Msa0888460:intron 40.0%
!!! TTCTTTTTTTGGTGGTAGCC+GGG + chr6_1:52961043-52961062 None:intergenic 40.0%
TATGAAGGTGGTGTTTGTCA+CGG + chr6_1:52961088-52961107 None:intergenic 40.0%
AACCTCATTGGCATTTGCAT+GGG + chr6_1:52961385-52961404 None:intergenic 40.0%
GGACAACAAGGAAGTAACTA+AGG + chr6_1:52961454-52961473 None:intergenic 40.0%
AATTAGGAGACAGGACAACA+AGG + chr6_1:52961466-52961485 None:intergenic 40.0%
TTAAGAGAGATGCATAGTGG+TGG + chr6_1:52954081-52954100 None:intergenic 40.0%
!! ATCGGTGTCAATGATGTATC+CGG + chr6_1:52954295-52954314 None:intergenic 40.0%
TAATCGTTCAACGTGGAATG+CGG - chr6_1:52954485-52954504 Msa0888460:CDS 40.0%
ACCAAGTATGTACCCAATAC+GGG + chr6_1:52954931-52954950 None:intergenic 40.0%
ATTGGGTACATACTTGGTAC+CGG - chr6_1:52954933-52954952 Msa0888460:intron 40.0%
GTACTCGTACAATGAATCCT+TGG - chr6_1:52955186-52955205 Msa0888460:intron 40.0%
ACAGCCAATAACATCAACCA+AGG + chr6_1:52955206-52955225 None:intergenic 40.0%
TTTACTCGGAGGTTATCATG+AGG + chr6_1:52955300-52955319 None:intergenic 40.0%
TAACCTCCGAGTAAAGATTC+TGG - chr6_1:52955305-52955324 Msa0888460:intron 40.0%
TTTCCAGAATCTTTACTCGG+AGG + chr6_1:52955311-52955330 None:intergenic 40.0%
! TCCGAGTAAAGATTCTGGAA+AGG - chr6_1:52955310-52955329 Msa0888460:intron 40.0%
!! CGTTTGCTGTAATGTAACTG+TGG - chr6_1:52955342-52955361 Msa0888460:intron 40.0%
TGCTGTAATGTAACTGTGGT+TGG - chr6_1:52955346-52955365 Msa0888460:intron 40.0%
TGTAATGTAACTGTGGTTGG+AGG - chr6_1:52955349-52955368 Msa0888460:intron 40.0%
GTAATGTAACTGTGGTTGGA+GGG - chr6_1:52955350-52955369 Msa0888460:intron 40.0%
ACTTTCCTCTTGCAATTCTG+TGG - chr6_1:52955379-52955398 Msa0888460:intron 40.0%
GGTGAAATTGTGGATGAATG+AGG - chr6_1:52955422-52955441 Msa0888460:intron 40.0%
AATAGTATAGTGCAGCCTCT+TGG - chr6_1:52955629-52955648 Msa0888460:CDS 40.0%
ATAGTATAGTGCAGCCTCTT+GGG - chr6_1:52955630-52955649 Msa0888460:CDS 40.0%
TGAGTGGTATGGAAAATGGT+AGG + chr6_1:52955677-52955696 None:intergenic 40.0%
CCCGATAAAAATTGAGTGCA+AGG - chr6_1:52956073-52956092 Msa0888460:intron 40.0%
ACCTGATCTAAACCATCTCA+TGG - chr6_1:52956111-52956130 Msa0888460:intron 40.0%
TCCATGAGATGGTTTAGATC+AGG + chr6_1:52956115-52956134 None:intergenic 40.0%
AACCCTCAACCTTACAAAAC+CGG - chr6_1:52956232-52956251 Msa0888460:CDS 40.0%
!! CCTTAAAAGCCGGTTTTGTA+AGG + chr6_1:52956244-52956263 None:intergenic 40.0%
!! CCTTACAAAACCGGCTTTTA+AGG - chr6_1:52956241-52956260 Msa0888460:CDS 40.0%
ACTACATAGGCCATATCTCT+AGG - chr6_1:52956288-52956307 Msa0888460:CDS 40.0%
! GCCATATCTCTAGGAAATGT+GGG - chr6_1:52956297-52956316 Msa0888460:CDS 40.0%
TCCCACATTTCCTAGAGATA+TGG + chr6_1:52956301-52956320 None:intergenic 40.0%
!!! TAATTGCGGCATTTTGGGTT+GGG + chr6_1:52956378-52956397 None:intergenic 40.0%
CTAGAAATTCCGCCTAATTG+CGG + chr6_1:52956392-52956411 None:intergenic 40.0%
CCTATCGTAGATCTGTTGTT+GGG + chr6_1:52956467-52956486 None:intergenic 40.0%
!! CCTTACAAGCCGATTTTGTA+AGG + chr6_1:52956531-52956550 None:intergenic 40.0%
!! CCTTACAAAATCGGCTTGTA+AGG - chr6_1:52956528-52956547 Msa0888460:intron 40.0%
! TTCACAAGTTTGTTTCTCCG+GGG + chr6_1:52956859-52956878 None:intergenic 40.0%
! CTTCACAAGTTTGTTTCTCC+GGG + chr6_1:52956860-52956879 None:intergenic 40.0%
! AGGCAGCTATTTCCTCAAAT+GGG + chr6_1:52956960-52956979 None:intergenic 40.0%
ATCCTCACTAATCTCCAATG+TGG + chr6_1:52956983-52957002 None:intergenic 40.0%
!! TGTTAATACCTTTTGGAGGC+AGG + chr6_1:52957319-52957338 None:intergenic 40.0%
TCATTGCATCAGTTGAGGTT+GGG + chr6_1:52957748-52957767 None:intergenic 40.0%
TTCATTGCATCAGTTGAGGT+TGG + chr6_1:52957749-52957768 None:intergenic 40.0%
GGTTAACAGCAAAGCAACAA+TGG - chr6_1:52957871-52957890 Msa0888460:intron 40.0%
GACTGCAAAATATCTTCACC+GGG + chr6_1:52958091-52958110 None:intergenic 40.0%
GGACTGCAAAATATCTTCAC+CGG + chr6_1:52958092-52958111 None:intergenic 40.0%
ACTCTCCAGCATTATCTACA+AGG + chr6_1:52958157-52958176 None:intergenic 40.0%
GTAGCAAGTCATAATTGGTG+TGG - chr6_1:52958644-52958663 Msa0888460:intron 40.0%
CATAATTGGTGTGGATACCA+TGG - chr6_1:52958653-52958672 Msa0888460:intron 40.0%
CATCTCAGAGATCATTTCCA+TGG + chr6_1:52958673-52958692 None:intergenic 40.0%
! CATGGAAATGATCTCTGAGA+TGG - chr6_1:52958671-52958690 Msa0888460:intron 40.0%
!! ATCTCTGAGATGGACTTATC+AGG - chr6_1:52958681-52958700 Msa0888460:CDS 40.0%
! GGTCCATCAGAAATTGACTT+TGG - chr6_1:52958702-52958721 Msa0888460:CDS 40.0%
CGAGAATGAGGATTATGACT+CGG - chr6_1:52958803-52958822 Msa0888460:CDS 40.0%
TTATTGTTTGCAGGAATGGC+TGG - chr6_1:52958928-52958947 Msa0888460:intron 40.0%
! GATGCGATTTTCTCATCCAA+TGG - chr6_1:52959024-52959043 Msa0888460:intron 40.0%
GTCTCCAAAAGCCACAAATT+AGG + chr6_1:52959089-52959108 None:intergenic 40.0%
GCAGATAGATGCTTCTGTAT+TGG + chr6_1:52959299-52959318 None:intergenic 40.0%
AAAAGGAAGTCTCGTCTGAA+GGG + chr6_1:52959466-52959485 None:intergenic 40.0%
TAAAAGGAAGTCTCGTCTGA+AGG + chr6_1:52959467-52959486 None:intergenic 40.0%
! CGAGACTTCCTTTTACAGAT+TGG - chr6_1:52959472-52959491 Msa0888460:intron 40.0%
! TGATCAACTTTAGGAGTTCC+TGG + chr6_1:52959585-52959604 None:intergenic 40.0%
TCAACACTTTAACCATGGGT+AGG + chr6_1:52959914-52959933 None:intergenic 40.0%
TCGTGTAGTCTTCTACTTCA+AGG + chr6_1:52960036-52960055 None:intergenic 40.0%
TCTCTCTGTTGGATATGCAA+GGG - chr6_1:52960151-52960170 Msa0888460:intron 40.0%
!! GATATGCAAGGGTATTCAAG+TGG - chr6_1:52960162-52960181 Msa0888460:intron 40.0%
GCATCAAAGACAACATGTCA+AGG + chr6_1:52960203-52960222 None:intergenic 40.0%
TTGCTAATTCCCCGGTTAAA+CGG - chr6_1:52960257-52960276 Msa0888460:intron 40.0%
AATGGAACAGATGACAAGGA+AGG + chr6_1:52960496-52960515 None:intergenic 40.0%
! TTTGACGTAAGGGTTTGTTC+AGG - chr6_1:52960631-52960650 Msa0888460:intron 40.0%
!!! TTCTTTTTTTGGTGGTAGCC+GGG + chr6_1:52961043-52961062 None:intergenic 40.0%
TATGAAGGTGGTGTTTGTCA+CGG + chr6_1:52961088-52961107 None:intergenic 40.0%
AACCTCATTGGCATTTGCAT+GGG + chr6_1:52961385-52961404 None:intergenic 40.0%
GGACAACAAGGAAGTAACTA+AGG + chr6_1:52961454-52961473 None:intergenic 40.0%
AATTAGGAGACAGGACAACA+AGG + chr6_1:52961466-52961485 None:intergenic 40.0%
! GATGAGGTACACCTTCCTTT+TGG + chr6_1:52954033-52954052 None:intergenic 45.0%
TGGAATGCGGAAGATGTGAA+TGG - chr6_1:52954498-52954517 Msa0888460:CDS 45.0%
AATGCGGAAGATGTGAATGG+TGG - chr6_1:52954501-52954520 Msa0888460:CDS 45.0%
!! GATGTGAATGGTGGTGGATT+AGG - chr6_1:52954510-52954529 Msa0888460:CDS 45.0%
! TGTAGACTTGCTTGTAGCTG+TGG - chr6_1:52954546-52954565 Msa0888460:intron 45.0%
ACCCGTATTGGGTACATACT+TGG - chr6_1:52954927-52954946 Msa0888460:intron 45.0%
GCAGGTTTATAGGCAGTTTC+AGG - chr6_1:52956037-52956056 Msa0888460:intron 45.0%
AAGTAGGGATGTCCATGAGA+TGG + chr6_1:52956126-52956145 None:intergenic 45.0%
!! AGCCGGTTTTGTAAGGTTGA+GGG + chr6_1:52956237-52956256 None:intergenic 45.0%
!! AAGCCGGTTTTGTAAGGTTG+AGG + chr6_1:52956238-52956257 None:intergenic 45.0%
! GGCCATATCTCTAGGAAATG+TGG - chr6_1:52956296-52956315 Msa0888460:CDS 45.0%
TTCACTGTGTTGGGTGTGAA+GGG + chr6_1:52956334-52956353 None:intergenic 45.0%
TCCAACACCTTCACTGTGTT+GGG + chr6_1:52956343-52956362 None:intergenic 45.0%
!! CTAATTGCGGCATTTTGGGT+TGG + chr6_1:52956379-52956398 None:intergenic 45.0%
CAACCCAAAATGCCGCAATT+AGG - chr6_1:52956377-52956396 Msa0888460:CDS 45.0%
!! AGCCTGAAGTGTTGACAATG+CGG - chr6_1:52956437-52956456 Msa0888460:CDS 45.0%
CCCAACAACAGATCTACGAT+AGG - chr6_1:52956464-52956483 Msa0888460:CDS 45.0%
GCCTATCGTAGATCTGTTGT+TGG + chr6_1:52956468-52956487 None:intergenic 45.0%
! AGTTTGTTTCTCCGGGGAAA+TGG + chr6_1:52956853-52956872 None:intergenic 45.0%
ACAACATCCTAGCTCAGATC+AGG - chr6_1:52956900-52956919 Msa0888460:CDS 45.0%
TCCTCAAATGGGTGATAGGA+TGG + chr6_1:52956949-52956968 None:intergenic 45.0%
! GAGGCAGCTATTTCCTCAAA+TGG + chr6_1:52956961-52956980 None:intergenic 45.0%
CTCACTAATCTCCAATGTGG+AGG + chr6_1:52956980-52956999 None:intergenic 45.0%
CTCCACATTGGAGATTAGTG+AGG - chr6_1:52956978-52956997 Msa0888460:CDS 45.0%
TGAAACGGAAACCCTGACTA+TGG + chr6_1:52957244-52957263 None:intergenic 45.0%
TAGGATTACCTGCCTCCAAA+AGG - chr6_1:52957308-52957327 Msa0888460:intron 45.0%
CAAAACAGGCTGCACTAGAA+AGG + chr6_1:52957496-52957515 None:intergenic 45.0%
! ACAACAAGCCCAAAAGTGTG+AGG + chr6_1:52958433-52958452 None:intergenic 45.0%
! ACGCAGGTCTTATAACTCCT+TGG + chr6_1:52959259-52959278 None:intergenic 45.0%
! TTCGGCAGTACTGGATTGAT+TGG + chr6_1:52959321-52959340 None:intergenic 45.0%
GTTTGTGTTTAGAGACTGCC+AGG - chr6_1:52959564-52959583 Msa0888460:intron 45.0%
CTCAACCTGATGCTATTGCA+AGG - chr6_1:52960059-52960078 Msa0888460:intron 45.0%
GATGACCTTGCAATAGCATC+AGG + chr6_1:52960067-52960086 None:intergenic 45.0%
AAGCCCTTAAGTCTCTCTGT+TGG - chr6_1:52960140-52960159 Msa0888460:intron 45.0%
GTCTCTCTGTTGGATATGCA+AGG - chr6_1:52960150-52960169 Msa0888460:intron 45.0%
!! ATGCAAGGGTATTCAAGTGG+AGG - chr6_1:52960165-52960184 Msa0888460:intron 45.0%
TCGCTTTCTTGCTAATTCCC+CGG - chr6_1:52960249-52960268 Msa0888460:intron 45.0%
TGCTAATTCCCCGGTTAAAC+GGG - chr6_1:52960258-52960277 Msa0888460:intron 45.0%
ACTCTCAAACCCGTTTAACC+GGG + chr6_1:52960270-52960289 None:intergenic 45.0%
CACTCTCAAACCCGTTTAAC+CGG + chr6_1:52960271-52960290 None:intergenic 45.0%
!!! TCTTTTTTTGGTGGTAGCCG+GGG + chr6_1:52961042-52961061 None:intergenic 45.0%
ATCATACTTGCAGGCTACGT+CGG - chr6_1:52961180-52961199 Msa0888460:CDS 45.0%
TTGTGTACAGAAGTGAAGGC+AGG - chr6_1:52961351-52961370 Msa0888460:intron 45.0%
TGTGTACAGAAGTGAAGGCA+GGG - chr6_1:52961352-52961371 Msa0888460:intron 45.0%
TTCCCATGCAAATGCCAATG+AGG - chr6_1:52961380-52961399 Msa0888460:intron 45.0%
CAACCTCATTGGCATTTGCA+TGG + chr6_1:52961386-52961405 None:intergenic 45.0%
! GATGAGGTACACCTTCCTTT+TGG + chr6_1:52954033-52954052 None:intergenic 45.0%
TGGAATGCGGAAGATGTGAA+TGG - chr6_1:52954498-52954517 Msa0888460:CDS 45.0%
AATGCGGAAGATGTGAATGG+TGG - chr6_1:52954501-52954520 Msa0888460:CDS 45.0%
!! GATGTGAATGGTGGTGGATT+AGG - chr6_1:52954510-52954529 Msa0888460:CDS 45.0%
! TGTAGACTTGCTTGTAGCTG+TGG - chr6_1:52954546-52954565 Msa0888460:intron 45.0%
ACCCGTATTGGGTACATACT+TGG - chr6_1:52954927-52954946 Msa0888460:intron 45.0%
GCAGGTTTATAGGCAGTTTC+AGG - chr6_1:52956037-52956056 Msa0888460:intron 45.0%
AAGTAGGGATGTCCATGAGA+TGG + chr6_1:52956126-52956145 None:intergenic 45.0%
!! AGCCGGTTTTGTAAGGTTGA+GGG + chr6_1:52956237-52956256 None:intergenic 45.0%
!! AAGCCGGTTTTGTAAGGTTG+AGG + chr6_1:52956238-52956257 None:intergenic 45.0%
! GGCCATATCTCTAGGAAATG+TGG - chr6_1:52956296-52956315 Msa0888460:CDS 45.0%
TTCACTGTGTTGGGTGTGAA+GGG + chr6_1:52956334-52956353 None:intergenic 45.0%
TCCAACACCTTCACTGTGTT+GGG + chr6_1:52956343-52956362 None:intergenic 45.0%
!! CTAATTGCGGCATTTTGGGT+TGG + chr6_1:52956379-52956398 None:intergenic 45.0%
CAACCCAAAATGCCGCAATT+AGG - chr6_1:52956377-52956396 Msa0888460:CDS 45.0%
!! AGCCTGAAGTGTTGACAATG+CGG - chr6_1:52956437-52956456 Msa0888460:CDS 45.0%
CCCAACAACAGATCTACGAT+AGG - chr6_1:52956464-52956483 Msa0888460:CDS 45.0%
GCCTATCGTAGATCTGTTGT+TGG + chr6_1:52956468-52956487 None:intergenic 45.0%
! AGTTTGTTTCTCCGGGGAAA+TGG + chr6_1:52956853-52956872 None:intergenic 45.0%
ACAACATCCTAGCTCAGATC+AGG - chr6_1:52956900-52956919 Msa0888460:CDS 45.0%
TCCTCAAATGGGTGATAGGA+TGG + chr6_1:52956949-52956968 None:intergenic 45.0%
! GAGGCAGCTATTTCCTCAAA+TGG + chr6_1:52956961-52956980 None:intergenic 45.0%
CTCACTAATCTCCAATGTGG+AGG + chr6_1:52956980-52956999 None:intergenic 45.0%
CTCCACATTGGAGATTAGTG+AGG - chr6_1:52956978-52956997 Msa0888460:CDS 45.0%
TGAAACGGAAACCCTGACTA+TGG + chr6_1:52957244-52957263 None:intergenic 45.0%
TAGGATTACCTGCCTCCAAA+AGG - chr6_1:52957308-52957327 Msa0888460:intron 45.0%
CAAAACAGGCTGCACTAGAA+AGG + chr6_1:52957496-52957515 None:intergenic 45.0%
! ACAACAAGCCCAAAAGTGTG+AGG + chr6_1:52958433-52958452 None:intergenic 45.0%
! ACGCAGGTCTTATAACTCCT+TGG + chr6_1:52959259-52959278 None:intergenic 45.0%
! TTCGGCAGTACTGGATTGAT+TGG + chr6_1:52959321-52959340 None:intergenic 45.0%
GTTTGTGTTTAGAGACTGCC+AGG - chr6_1:52959564-52959583 Msa0888460:intron 45.0%
CTCAACCTGATGCTATTGCA+AGG - chr6_1:52960059-52960078 Msa0888460:intron 45.0%
GATGACCTTGCAATAGCATC+AGG + chr6_1:52960067-52960086 None:intergenic 45.0%
AAGCCCTTAAGTCTCTCTGT+TGG - chr6_1:52960140-52960159 Msa0888460:intron 45.0%
GTCTCTCTGTTGGATATGCA+AGG - chr6_1:52960150-52960169 Msa0888460:intron 45.0%
!! ATGCAAGGGTATTCAAGTGG+AGG - chr6_1:52960165-52960184 Msa0888460:intron 45.0%
TCGCTTTCTTGCTAATTCCC+CGG - chr6_1:52960249-52960268 Msa0888460:intron 45.0%
TGCTAATTCCCCGGTTAAAC+GGG - chr6_1:52960258-52960277 Msa0888460:intron 45.0%
ACTCTCAAACCCGTTTAACC+GGG + chr6_1:52960270-52960289 None:intergenic 45.0%
CACTCTCAAACCCGTTTAAC+CGG + chr6_1:52960271-52960290 None:intergenic 45.0%
!!! TCTTTTTTTGGTGGTAGCCG+GGG + chr6_1:52961042-52961061 None:intergenic 45.0%
ATCATACTTGCAGGCTACGT+CGG - chr6_1:52961180-52961199 Msa0888460:CDS 45.0%
TTGTGTACAGAAGTGAAGGC+AGG - chr6_1:52961351-52961370 Msa0888460:intron 45.0%
TGTGTACAGAAGTGAAGGCA+GGG - chr6_1:52961352-52961371 Msa0888460:intron 45.0%
TTCCCATGCAAATGCCAATG+AGG - chr6_1:52961380-52961399 Msa0888460:intron 45.0%
CAACCTCATTGGCATTTGCA+TGG + chr6_1:52961386-52961405 None:intergenic 45.0%
!! TAAAAAAAAAAAAAAGAAAA+AGG - chr6_1:52956009-52956028 Msa0888460:intron 5.0%
!! TAAAAAAAAAAAAAAGAAAA+AGG - chr6_1:52956009-52956028 Msa0888460:intron 5.0%
ATTGGAAAAGCGAGTGGAGG+AGG + chr6_1:52954176-52954195 None:intergenic 50.0%
GAGATTGGAAAAGCGAGTGG+AGG + chr6_1:52954179-52954198 None:intergenic 50.0%
ACGGAGATTGGAAAAGCGAG+TGG + chr6_1:52954182-52954201 None:intergenic 50.0%
! GAGAGAGAGAGTACGGAGAT+TGG + chr6_1:52954194-52954213 None:intergenic 50.0%
AGCGAGAGAGAGAGAGAGTA+CGG + chr6_1:52954201-52954220 None:intergenic 50.0%
! AGACTTGCTTGTAGCTGTGG+TGG - chr6_1:52954549-52954568 Msa0888460:intron 50.0%
TTGAGTGCAAGGTGAGAGAC+TGG - chr6_1:52956084-52956103 Msa0888460:intron 50.0%
GCAGCACACACCTTAAAAGC+CGG + chr6_1:52956254-52956273 None:intergenic 50.0%
TCACTGTGTTGGGTGTGAAG+GGG + chr6_1:52956333-52956352 None:intergenic 50.0%
CTTCACTGTGTTGGGTGTGA+AGG + chr6_1:52956335-52956354 None:intergenic 50.0%
CTTCACACCCAACACAGTGA+AGG - chr6_1:52956333-52956352 Msa0888460:CDS 50.0%
! ACCCAACACAGTGAAGGTGT+TGG - chr6_1:52956339-52956358 Msa0888460:CDS 50.0%
CTCCAACACCTTCACTGTGT+TGG + chr6_1:52956344-52956363 None:intergenic 50.0%
!! CAACACAGTGAAGGTGTTGG+AGG - chr6_1:52956342-52956361 Msa0888460:CDS 50.0%
! CCGCCTAATTGCGGCATTTT+GGG + chr6_1:52956383-52956402 None:intergenic 50.0%
CCCAAAATGCCGCAATTAGG+CGG - chr6_1:52956380-52956399 Msa0888460:CDS 50.0%
! TCCGCCTAATTGCGGCATTT+TGG + chr6_1:52956384-52956403 None:intergenic 50.0%
!! GCCTGAAGTGTTGACAATGC+GGG - chr6_1:52956438-52956457 Msa0888460:CDS 50.0%
TCCCGCATTGTCAACACTTC+AGG + chr6_1:52956442-52956461 None:intergenic 50.0%
GCCATCCTATCACCCATTTG+AGG - chr6_1:52956945-52956964 Msa0888460:CDS 50.0%
GGAAATAGCTGCCTCCACAT+TGG - chr6_1:52956966-52956985 Msa0888460:CDS 50.0%
GGGTGAAACTTCCCAAGAAC+AGG + chr6_1:52958020-52958039 None:intergenic 50.0%
GAACAGGGTCACCGAATGTA+TGG + chr6_1:52958290-52958309 None:intergenic 50.0%
GGCTGCTCCATCCAATCAAT+TGG + chr6_1:52959218-52959237 None:intergenic 50.0%
TGGAAGACTACACAAGCTGG+AGG + chr6_1:52959239-52959258 None:intergenic 50.0%
CCTTGGAAGACTACACAAGC+TGG + chr6_1:52959242-52959261 None:intergenic 50.0%
CCAGCTTGTGTAGTCTTCCA+AGG - chr6_1:52959239-52959258 Msa0888460:intron 50.0%
CATGAGGTATGACCTACCCA+TGG - chr6_1:52959899-52959918 Msa0888460:intron 50.0%
CTCTCAAACCCGTTTAACCG+GGG + chr6_1:52960269-52960288 None:intergenic 50.0%
! GGAGGCACAACTTATCTGTG+TGG - chr6_1:52960597-52960616 Msa0888460:intron 50.0%
CTTATCTGTGTGGACTCGCT+CGG - chr6_1:52960607-52960626 Msa0888460:intron 50.0%
TTATCTGTGTGGACTCGCTC+GGG - chr6_1:52960608-52960627 Msa0888460:intron 50.0%
! TGAGCTTGGCTCAGTTGGTA+GGG - chr6_1:52960981-52961000 Msa0888460:intron 50.0%
ATTTAGACCCGCGCAATGCA+CGG - chr6_1:52961607-52961626 Msa0888460:five_prime_UTR 50.0%
CACGGGTGTAGCAGATGTAA+AGG - chr6_1:52961625-52961644 Msa0888460:five_prime_UTR 50.0%
ATTGGAAAAGCGAGTGGAGG+AGG + chr6_1:52954176-52954195 None:intergenic 50.0%
GAGATTGGAAAAGCGAGTGG+AGG + chr6_1:52954179-52954198 None:intergenic 50.0%
ACGGAGATTGGAAAAGCGAG+TGG + chr6_1:52954182-52954201 None:intergenic 50.0%
! GAGAGAGAGAGTACGGAGAT+TGG + chr6_1:52954194-52954213 None:intergenic 50.0%
AGCGAGAGAGAGAGAGAGTA+CGG + chr6_1:52954201-52954220 None:intergenic 50.0%
! AGACTTGCTTGTAGCTGTGG+TGG - chr6_1:52954549-52954568 Msa0888460:intron 50.0%
TTGAGTGCAAGGTGAGAGAC+TGG - chr6_1:52956084-52956103 Msa0888460:intron 50.0%
GCAGCACACACCTTAAAAGC+CGG + chr6_1:52956254-52956273 None:intergenic 50.0%
TCACTGTGTTGGGTGTGAAG+GGG + chr6_1:52956333-52956352 None:intergenic 50.0%
CTTCACTGTGTTGGGTGTGA+AGG + chr6_1:52956335-52956354 None:intergenic 50.0%
CTTCACACCCAACACAGTGA+AGG - chr6_1:52956333-52956352 Msa0888460:CDS 50.0%
! ACCCAACACAGTGAAGGTGT+TGG - chr6_1:52956339-52956358 Msa0888460:CDS 50.0%
CTCCAACACCTTCACTGTGT+TGG + chr6_1:52956344-52956363 None:intergenic 50.0%
!! CAACACAGTGAAGGTGTTGG+AGG - chr6_1:52956342-52956361 Msa0888460:CDS 50.0%
! CCGCCTAATTGCGGCATTTT+GGG + chr6_1:52956383-52956402 None:intergenic 50.0%
CCCAAAATGCCGCAATTAGG+CGG - chr6_1:52956380-52956399 Msa0888460:CDS 50.0%
! TCCGCCTAATTGCGGCATTT+TGG + chr6_1:52956384-52956403 None:intergenic 50.0%
!! GCCTGAAGTGTTGACAATGC+GGG - chr6_1:52956438-52956457 Msa0888460:CDS 50.0%
TCCCGCATTGTCAACACTTC+AGG + chr6_1:52956442-52956461 None:intergenic 50.0%
GCCATCCTATCACCCATTTG+AGG - chr6_1:52956945-52956964 Msa0888460:CDS 50.0%
GGAAATAGCTGCCTCCACAT+TGG - chr6_1:52956966-52956985 Msa0888460:CDS 50.0%
GGGTGAAACTTCCCAAGAAC+AGG + chr6_1:52958020-52958039 None:intergenic 50.0%
GAACAGGGTCACCGAATGTA+TGG + chr6_1:52958290-52958309 None:intergenic 50.0%
GGCTGCTCCATCCAATCAAT+TGG + chr6_1:52959218-52959237 None:intergenic 50.0%
TGGAAGACTACACAAGCTGG+AGG + chr6_1:52959239-52959258 None:intergenic 50.0%
CCTTGGAAGACTACACAAGC+TGG + chr6_1:52959242-52959261 None:intergenic 50.0%
CCAGCTTGTGTAGTCTTCCA+AGG - chr6_1:52959239-52959258 Msa0888460:intron 50.0%
CATGAGGTATGACCTACCCA+TGG - chr6_1:52959899-52959918 Msa0888460:intron 50.0%
CTCTCAAACCCGTTTAACCG+GGG + chr6_1:52960269-52960288 None:intergenic 50.0%
! GGAGGCACAACTTATCTGTG+TGG - chr6_1:52960597-52960616 Msa0888460:intron 50.0%
CTTATCTGTGTGGACTCGCT+CGG - chr6_1:52960607-52960626 Msa0888460:intron 50.0%
TTATCTGTGTGGACTCGCTC+GGG - chr6_1:52960608-52960627 Msa0888460:intron 50.0%
! TGAGCTTGGCTCAGTTGGTA+GGG - chr6_1:52960981-52961000 Msa0888460:intron 50.0%
ATTTAGACCCGCGCAATGCA+CGG - chr6_1:52961607-52961626 Msa0888460:five_prime_UTR 50.0%
CACGGGTGTAGCAGATGTAA+AGG - chr6_1:52961625-52961644 Msa0888460:five_prime_UTR 50.0%
AGGTGAAAGCGGGTGGCAAT+GGG + chr6_1:52954148-52954167 None:intergenic 55.0%
AGGAGGAGGAGAGGTGAAAG+CGG + chr6_1:52954159-52954178 None:intergenic 55.0%
GCGGAAGATGTGAATGGTGG+TGG - chr6_1:52954504-52954523 Msa0888460:CDS 55.0%
ACAGGCTCCTGATCTGAGCT+AGG + chr6_1:52956910-52956929 None:intergenic 55.0%
ACTCGCTCGGGTTTGACGTA+AGG - chr6_1:52960620-52960639 Msa0888460:intron 55.0%
CTCGCTCGGGTTTGACGTAA+GGG - chr6_1:52960621-52960640 Msa0888460:intron 55.0%
GTGAGCTTGGCTCAGTTGGT+AGG - chr6_1:52960980-52960999 Msa0888460:intron 55.0%
! AAGGTCTAGGGTTCGAACCC+CGG - chr6_1:52961022-52961041 Msa0888460:intron 55.0%
TTTAGACCCGCGCAATGCAC+GGG - chr6_1:52961608-52961627 Msa0888460:five_prime_UTR 55.0%
AGGTGAAAGCGGGTGGCAAT+GGG + chr6_1:52954148-52954167 None:intergenic 55.0%
AGGAGGAGGAGAGGTGAAAG+CGG + chr6_1:52954159-52954178 None:intergenic 55.0%
GCGGAAGATGTGAATGGTGG+TGG - chr6_1:52954504-52954523 Msa0888460:CDS 55.0%
ACAGGCTCCTGATCTGAGCT+AGG + chr6_1:52956910-52956929 None:intergenic 55.0%
ACTCGCTCGGGTTTGACGTA+AGG - chr6_1:52960620-52960639 Msa0888460:intron 55.0%
CTCGCTCGGGTTTGACGTAA+GGG - chr6_1:52960621-52960640 Msa0888460:intron 55.0%
GTGAGCTTGGCTCAGTTGGT+AGG - chr6_1:52960980-52960999 Msa0888460:intron 55.0%
! AAGGTCTAGGGTTCGAACCC+CGG - chr6_1:52961022-52961041 Msa0888460:intron 55.0%
TTTAGACCCGCGCAATGCAC+GGG - chr6_1:52961608-52961627 Msa0888460:five_prime_UTR 55.0%
TGAAAGCGGGTGGCAATGGG+AGG + chr6_1:52954145-52954164 None:intergenic 60.0%
GAGGTGAAAGCGGGTGGCAA+TGG + chr6_1:52954149-52954168 None:intergenic 60.0%
GGAGGAGGAGAGGTGAAAGC+GGG + chr6_1:52954158-52954177 None:intergenic 60.0%
GGAAAAGCGAGTGGAGGAGG+AGG + chr6_1:52954173-52954192 None:intergenic 60.0%
CTCATTACCCGAGCGTGAGC+GGG + chr6_1:52956419-52956438 None:intergenic 60.0%
GCTCATTACCCGAGCGTGAG+CGG + chr6_1:52956420-52956439 None:intergenic 60.0%
ACCCAGGCACTCCATTTCCC+CGG - chr6_1:52956839-52956858 Msa0888460:intron 60.0%
! TCCGGGGAAATGGAGTGCCT+GGG + chr6_1:52956843-52956862 None:intergenic 60.0%
GCTGAGAGTCCTCGTGAGCT+TGG - chr6_1:52960967-52960986 Msa0888460:intron 60.0%
CCAACTGAGCCAAGCTCACG+AGG + chr6_1:52960979-52960998 None:intergenic 60.0%
CCTCGTGAGCTTGGCTCAGT+TGG - chr6_1:52960976-52960995 Msa0888460:intron 60.0%
TGCTACACCCGTGCATTGCG+CGG + chr6_1:52961618-52961637 None:intergenic 60.0%
TGAAAGCGGGTGGCAATGGG+AGG + chr6_1:52954145-52954164 None:intergenic 60.0%
GAGGTGAAAGCGGGTGGCAA+TGG + chr6_1:52954149-52954168 None:intergenic 60.0%
GGAGGAGGAGAGGTGAAAGC+GGG + chr6_1:52954158-52954177 None:intergenic 60.0%
GGAAAAGCGAGTGGAGGAGG+AGG + chr6_1:52954173-52954192 None:intergenic 60.0%
CTCATTACCCGAGCGTGAGC+GGG + chr6_1:52956419-52956438 None:intergenic 60.0%
GCTCATTACCCGAGCGTGAG+CGG + chr6_1:52956420-52956439 None:intergenic 60.0%
ACCCAGGCACTCCATTTCCC+CGG - chr6_1:52956839-52956858 Msa0888460:intron 60.0%
! TCCGGGGAAATGGAGTGCCT+GGG + chr6_1:52956843-52956862 None:intergenic 60.0%
GCTGAGAGTCCTCGTGAGCT+TGG - chr6_1:52960967-52960986 Msa0888460:intron 60.0%
CCAACTGAGCCAAGCTCACG+AGG + chr6_1:52960979-52960998 None:intergenic 60.0%
CCTCGTGAGCTTGGCTCAGT+TGG - chr6_1:52960976-52960995 Msa0888460:intron 60.0%
TGCTACACCCGTGCATTGCG+CGG + chr6_1:52961618-52961637 None:intergenic 60.0%
GGAGGAGAGGTGAAAGCGGG+TGG + chr6_1:52954155-52954174 None:intergenic 65.0%
AGCGAGTGGAGGAGGAGGAG+AGG + chr6_1:52954168-52954187 None:intergenic 65.0%
CTAGCACACCCGCTCACGCT+CGG - chr6_1:52956408-52956427 Msa0888460:CDS 65.0%
TAGCACACCCGCTCACGCTC+GGG - chr6_1:52956409-52956428 Msa0888460:CDS 65.0%
! CTCCGGGGAAATGGAGTGCC+TGG + chr6_1:52956844-52956863 None:intergenic 65.0%
GCTACACCCGTGCATTGCGC+GGG + chr6_1:52961617-52961636 None:intergenic 65.0%
GGAGGAGAGGTGAAAGCGGG+TGG + chr6_1:52954155-52954174 None:intergenic 65.0%
AGCGAGTGGAGGAGGAGGAG+AGG + chr6_1:52954168-52954187 None:intergenic 65.0%
CTAGCACACCCGCTCACGCT+CGG - chr6_1:52956408-52956427 Msa0888460:CDS 65.0%
TAGCACACCCGCTCACGCTC+GGG - chr6_1:52956409-52956428 Msa0888460:CDS 65.0%
! CTCCGGGGAAATGGAGTGCC+TGG + chr6_1:52956844-52956863 None:intergenic 65.0%
GCTACACCCGTGCATTGCGC+GGG + chr6_1:52961617-52961636 None:intergenic 65.0%
GTGGTGGTTTCGACGCGCCG+TGG - chr6_1:52954565-52954584 Msa0888460:intron 70.0%
GTGGTGGTTTCGACGCGCCG+TGG - chr6_1:52954565-52954584 Msa0888460:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 52954010 52961714 52954010 ID=Msa0888460;Name=Msa0888460
chr6_1 mRNA 52954010 52961714 52954010 ID=Msa0888460-mRNA-1;Parent=Msa0888460;Name=Msa0888460-mRNA-1;_AED=0.05;_eAED=0.05;_QI=117|1|1|1|1|1|11|417|524
chr6_1 exon 52954010 52954531 52954010 ID=Msa0888460-mRNA-1:exon:10711;Parent=Msa0888460-mRNA-1
chr6_1 exon 52955031 52955126 52955031 ID=Msa0888460-mRNA-1:exon:10710;Parent=Msa0888460-mRNA-1
chr6_1 exon 52955538 52955696 52955538 ID=Msa0888460-mRNA-1:exon:10709;Parent=Msa0888460-mRNA-1
chr6_1 exon 52956189 52956524 52956189 ID=Msa0888460-mRNA-1:exon:10708;Parent=Msa0888460-mRNA-1
chr6_1 exon 52956655 52956783 52956655 ID=Msa0888460-mRNA-1:exon:10707;Parent=Msa0888460-mRNA-1
chr6_1 exon 52956900 52957076 52956900 ID=Msa0888460-mRNA-1:exon:10706;Parent=Msa0888460-mRNA-1
chr6_1 exon 52957589 52957656 52957589 ID=Msa0888460-mRNA-1:exon:10705;Parent=Msa0888460-mRNA-1
chr6_1 exon 52957750 52957852 52957750 ID=Msa0888460-mRNA-1:exon:10704;Parent=Msa0888460-mRNA-1
chr6_1 exon 52958680 52958902 52958680 ID=Msa0888460-mRNA-1:exon:10703;Parent=Msa0888460-mRNA-1
chr6_1 exon 52961138 52961243 52961138 ID=Msa0888460-mRNA-1:exon:10702;Parent=Msa0888460-mRNA-1
chr6_1 exon 52961525 52961714 52961525 ID=Msa0888460-mRNA-1:exon:10701;Parent=Msa0888460-mRNA-1
chr6_1 five_prime_UTR 52961598 52961714 52961598 ID=Msa0888460-mRNA-1:five_prime_utr;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52961525 52961597 52961525 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52961138 52961243 52961138 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52958680 52958902 52958680 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52957750 52957852 52957750 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52957589 52957656 52957589 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52956900 52957076 52956900 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52956655 52956783 52956655 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52956189 52956524 52956189 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52955538 52955696 52955538 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52955031 52955126 52955031 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 CDS 52954427 52954531 52954427 ID=Msa0888460-mRNA-1:cds;Parent=Msa0888460-mRNA-1
chr6_1 three_prime_UTR 52954010 52954426 52954010 ID=Msa0888460-mRNA-1:three_prime_utr;Parent=Msa0888460-mRNA-1
Gene Sequence

>Msa0888460

ATGATGATTATCGATCCTCCCATTGCCACCCGCTTTCACCTCTCCTCCTCCTCCACTCGCTTTTCCAATCTCCATAATAATCGTTCAACGTGGAATGCGGAAGATGTGAATGGTGGTGGATTAGGTTATGTTGCGTCGTGTAGACTTGCTTGTAGCTGTGGTGGTTTCGACGCGCCGTGGATAAGAAGTAAAAAGTACCCAGGCACTCCATTTCCCCGGAGAAACAAACTTGTGAAGAATAGAATTCGAGTATCATCACAACATCCTAGCTCAGATCAGGAGCCTGTAAAGAAAAATGAGAAGCCATCCTATCACCCATTTGAGGAAATAGCTGCCTCCACATTGGAGATTAGTGAGGATGTTAGACTTACTGCAGCAGAAACAAGTAGAACTGTTATTGAGGTTAACAGCAAAGCAACAATGGTGTTTTCAACTTTCGTTAATGATGAATATCATGATAATATTGTTTGGCCAGATTTGCCATATTTGACAGATGAACATGGAAATATATATTTTCAAGCAAAGCCCGGTGAAGATATTTTGCAGTCCCTAACTTCAGAAAATAATTTTGTGCAAGTCATAATTGGTGTGGATACCATGGAAATGATCTCTGAGATGGACTTATCAGGTCCATCAGAAATTGACTTTGGGATTGAGGAAATTGATGATGAAGATACTGATGATTTAGATGACAGCGATGTTGAAGATGACGTAGATGAAAATGAAGACGAGAATGAGGATTATGACTCGGAATGGCTGGCTGTTCTTTCAGATGACGATGAGCTCGACGATGATGATGATGAAGCACTTGCAGACTGGGCAAAATTGGAGACGATGCGATTTTCTCATCCAATGGATTTTGCTAAAAAATTGACTGAGATTGCTTCAGATGATCCAATTGATTGGATGGAGCAGCCTCCAGCTTGTGTAGTCTTCCAAGGAGTTATAAGACCTGCGTTTATTGAAGAAAATTCTCCAATACAGAAGCATCTATCTGCCAATCAATCCAGTACTGCCGAAATTAGTAAAGTAACAGAAAACAAAGAAGAAAGTATTGGTGCGATTAATGGTCATGAGCACAATAAAGAGTCGTCTGAAGATAACGAATCACAAAAGGTGGAAAATAATGAGAATGGTGATATCCCTTCAGACGAGACTTCCTTTTACAGATTGGAGATTGTTAAGATTCAAGTGTTTTCTGCACACGGACATCCCGTTGTCCTTGAAGTAGAAGACTACACGAAAGCTCAACCTGATGCTATTGCAAGGTCATCGTCCAAAATTATATCTCATTTGAAAGCTGCTGGAGAATCAGAAAAGACTTTGCAAGCCCTTAAGTCTCTCTGTTGGATATGCAAGGGTATTCAAGTGGAGGAGGCACAACTTATCTGTGTGGACTCGCTCGGGTTTGACGTAAGGGTTTGTTCAGGAACTCAAGTTCAAACACTGAGATTCGGATTCAAGAAAAGGGCTACGTCGGAATACAGTGCCGAGAGACAACTCAATGATATACTATTTCCAAGAAATCATCCAAAGCAACAAAAAACGAAGCAAACACATCAAAATGAATGCTAA

Protein sequence

>Msa0888460

MMIIDPPIATRFHLSSSSTRFSNLHNNRSTWNAEDVNGGGLGYVASCRLACSCGGFDAPWIRSKKYPGTPFPRRNKLVKNRIRVSSQHPSSDQEPVKKNEKPSYHPFEEIAASTLEISEDVRLTAAETSRTVIEVNSKATMVFSTFVNDEYHDNIVWPDLPYLTDEHGNIYFQAKPGEDILQSLTSENNFVQVIIGVDTMEMISEMDLSGPSEIDFGIEEIDDEDTDDLDDSDVEDDVDENEDENEDYDSEWLAVLSDDDELDDDDDEALADWAKLETMRFSHPMDFAKKLTEIASDDPIDWMEQPPACVVFQGVIRPAFIEENSPIQKHLSANQSSTAEISKVTENKEESIGAINGHEHNKESSEDNESQKVENNENGDIPSDETSFYRLEIVKIQVFSAHGHPVVLEVEDYTKAQPDAIARSSSKIISHLKAAGESEKTLQALKSLCWICKGIQVEEAQLICVDSLGFDVRVCSGTQVQTLRFGFKKRATSEYSAERQLNDILFPRNHPKQQKTKQTHQNEC*