AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0496380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0496380 MtrunA17_Chr3g0090331 94.340 371 21 0 54 424 127 497 0.0 749
Msa0496380 MtrunA17_Chr4g0020241 73.077 364 96 2 54 417 126 487 0.0 571
Msa0496380 MtrunA17_Chr3g0118851 56.354 362 150 4 54 413 131 486 1.38e-141 413
Msa0496380 MtrunA17_Chr3g0118841 54.768 367 159 4 54 419 132 492 1.89e-138 405
Msa0496380 MtrunA17_Chr3g0118881 52.394 376 163 5 54 419 131 500 3.61e-137 402
Msa0496380 MtrunA17_Chr1g0199991 48.849 391 192 4 33 417 68 456 1.15e-132 389
Msa0496380 MtrunA17_Chr1g0153881 54.247 365 156 7 54 417 143 497 1.03e-131 388
Msa0496380 MtrunA17_Chr7g0219051 50.000 380 171 6 54 417 88 464 1.53e-129 382
Msa0496380 MtrunA17_Chr4g0038311 49.471 378 176 5 54 417 87 463 2.31e-128 379
Msa0496380 MtrunA17_Chr1g0199971 48.108 370 185 3 54 417 88 456 3.87e-126 372
Msa0496380 MtrunA17_Chr3g0118831 52.575 369 130 7 54 417 131 459 5.66e-123 365
Msa0496380 MtrunA17_Chr2g0309521 45.845 373 195 4 54 420 94 465 7.31e-121 359
Msa0496380 MtrunA17_Chr3g0118861 50.265 378 139 7 54 419 129 469 1.98e-120 358
Msa0496380 MtrunA17_Chr1g0153941 48.711 388 169 6 54 417 131 512 2.34e-120 360
Msa0496380 MtrunA17_Chr2g0309541 45.623 377 196 5 54 422 93 468 2.93e-120 358
Msa0496380 MtrunA17_Chr3g0118891 52.893 363 128 8 54 413 131 453 4.67e-120 357
Msa0496380 MtrunA17_Chr2g0309511 45.576 373 196 4 54 420 94 465 9.34e-120 357
Msa0496380 MtrunA17_Chr2g0318911 45.799 369 193 4 54 416 95 462 1.50e-116 348
Msa0496380 MtrunA17_Chr4g0047861 46.632 386 184 8 54 420 106 488 5.43e-115 345
Msa0496380 MtrunA17_Chr2g0281641 44.764 382 191 5 54 417 8 387 2.44e-110 330
Msa0496380 MtrunA17_Chr4g0068841 44.103 390 192 7 54 419 92 479 1.87e-108 328
Msa0496380 MtrunA17_Chr2g0281621 44.386 383 195 5 54 420 88 468 1.58e-107 325
Msa0496380 MtrunA17_Chr5g0431301 41.710 386 205 7 54 421 82 465 8.46e-96 295
Msa0496380 MtrunA17_Chr3g0126031 41.623 382 207 7 54 421 81 460 4.62e-95 293
Msa0496380 MtrunA17_Chr7g0221551 41.579 380 201 8 54 417 83 457 1.49e-91 284
Msa0496380 MtrunA17_Chr3g0126051 39.791 382 216 6 54 421 86 467 7.16e-91 283
Msa0496380 MtrunA17_Chr3g0131731 41.253 383 201 10 54 417 84 461 8.13e-91 282
Msa0496380 MtrunA17_Chr2g0304931 40.789 380 205 8 54 419 91 464 9.67e-88 274
Msa0496380 MtrunA17_Chr3g0094811 41.361 382 196 9 54 417 83 454 2.82e-85 268
Msa0496380 MtrunA17_Chr4g0068861 41.056 341 177 7 54 372 138 476 8.74e-85 267
Msa0496380 MtrunA17_Chr8g0385871 39.005 382 210 9 54 417 86 462 8.44e-83 261
Msa0496380 MtrunA17_Chr8g0338461 31.325 415 230 7 54 416 84 495 6.32e-66 218
Msa0496380 MtrunA17_Chr1g0153921 44.395 223 117 3 195 417 1 216 1.80e-61 198
Msa0496380 MtrunA17_Chr7g0249431 34.928 418 209 14 54 413 83 495 4.52e-61 206
Msa0496380 MtrunA17_Chr1g0153931 72.093 129 35 1 54 181 129 257 1.90e-59 195
Msa0496380 MtrunA17_Chr7g0234051 30.769 416 232 7 54 416 83 495 3.23e-58 198
Msa0496380 MtrunA17_Chr1g0204191 31.604 424 222 11 14 417 115 490 2.25e-53 185
Msa0496380 MtrunA17_Chr2g0285371 28.093 388 249 11 54 416 87 469 1.79e-42 155
Msa0496380 MtrunA17_Chr1g0165811 43.850 187 95 4 54 238 83 261 2.53e-41 147
Msa0496380 MtrunA17_Chr4g0009701 26.615 387 250 12 54 416 94 470 2.12e-39 147
Msa0496380 MtrunA17_Chr4g0028271 31.234 381 218 14 54 413 136 493 3.75e-39 147
Msa0496380 MtrunA17_Chr2g0327401 30.607 379 225 15 54 413 138 497 4.49e-39 147
Msa0496380 MtrunA17_Chr2g0285351 26.031 388 258 10 54 416 86 469 2.48e-37 141
Msa0496380 MtrunA17_Chr4g0009681 26.302 384 255 9 54 416 91 467 7.34e-37 140
Msa0496380 MtrunA17_Chr4g0028281 30.239 377 233 13 51 413 131 491 4.84e-36 138
Msa0496380 MtrunA17_Chr4g0009661 25.648 386 255 10 54 416 94 470 1.56e-35 136
Msa0496380 MtrunA17_Chr2g0285381 27.937 383 249 13 54 416 90 465 2.57e-35 135
Msa0496380 MtrunA17_Chr4g0009711 25.781 384 257 10 54 416 94 470 2.84e-35 135
Msa0496380 MtrunA17_Chr3g0133011 27.436 390 252 10 54 416 111 496 8.08e-35 135
Msa0496380 MtrunA17_Chr7g0234041 29.600 375 201 11 54 375 80 444 8.83e-35 134
Msa0496380 MtrunA17_Chr4g0009641 25.916 382 235 10 54 416 94 446 2.98e-34 132
Msa0496380 MtrunA17_Chr4g0009651 25.065 387 256 10 54 416 94 470 4.38e-34 132
Msa0496380 MtrunA17_Chr1g0171411 30.526 380 225 17 54 414 122 481 5.13e-34 132
Msa0496380 MtrunA17_Chr4g0009671 25.389 386 256 12 54 416 59 435 2.27e-33 130
Msa0496380 MtrunA17_Chr2g0327381 27.644 416 234 12 54 413 132 536 4.50e-33 130
Msa0496380 MtrunA17_Chr4g0028261 31.414 382 217 19 54 413 157 515 8.41e-33 129
Msa0496380 MtrunA17_Chr5g0447441 29.235 366 227 13 54 407 83 428 6.42e-32 126
Msa0496380 MtrunA17_Chr1g0199171 28.199 422 245 18 28 414 89 487 6.80e-32 127
Msa0496380 MtrunA17_Chr2g0327371 27.184 412 228 15 54 413 121 512 7.85e-31 124
Msa0496380 MtrunA17_Chr4g0028241 27.851 377 240 14 54 413 128 489 9.26e-30 120
Msa0496380 MtrunA17_Chr4g0044051 28.649 370 224 15 54 407 87 432 1.57e-26 110
Msa0496380 MtrunA17_Chr3g0093971 23.622 381 249 14 54 407 80 445 2.74e-26 110
Msa0496380 MtrunA17_Chr1g0165821 37.013 154 89 3 269 417 28 178 6.28e-26 103
Msa0496380 MtrunA17_Chr4g0009721 22.520 373 236 11 54 416 90 419 4.96e-18 85.5
Msa0496380 MtrunA17_Chr7g0229651 27.473 182 119 5 181 349 1 182 1.69e-16 77.8
Msa0496380 MtrunA17_Chr2g0279371 35.000 120 71 3 54 168 66 183 6.10e-13 67.4
Msa0496380 MtrunA17_Chr4g0027731 21.554 399 255 11 54 412 74 454 6.99e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0496380 AT3G63470.1 65.591 372 120 3 54 421 134 501 0.0 525
Msa0496380 AT5G08260.1 51.042 384 168 3 54 417 93 476 2.04e-136 400
Msa0496380 AT4G30610.1 51.579 380 165 6 54 417 86 462 6.32e-133 390
Msa0496380 AT3G07990.1 50.000 372 179 3 54 419 89 459 1.84e-130 384
Msa0496380 AT2G35780.1 48.794 373 178 6 54 418 85 452 7.10e-128 377
Msa0496380 AT5G23210.2 48.379 401 175 6 47 417 1 399 1.39e-127 374
Msa0496380 AT5G23210.5 48.985 394 169 6 54 417 9 400 3.91e-127 374
Msa0496380 AT3G52000.1 50.674 371 172 7 54 419 117 481 8.28e-127 375
Msa0496380 AT3G02110.1 47.532 385 178 7 54 417 90 471 3.46e-126 374
Msa0496380 AT5G23210.1 48.985 394 169 6 54 417 104 495 5.25e-126 374
Msa0496380 AT2G24010.1 49.198 374 175 7 54 417 83 451 1.97e-125 371
Msa0496380 AT2G24010.2 49.198 374 175 7 54 417 98 466 4.12e-125 370
Msa0496380 AT4G30810.1 46.505 372 189 4 54 416 91 461 1.02e-124 370
Msa0496380 AT3G52020.1 49.067 375 176 9 54 419 132 500 5.60e-124 369
Msa0496380 AT2G24000.1 47.493 379 181 5 54 416 84 460 1.34e-121 361
Msa0496380 AT3G52010.1 48.930 374 178 7 54 419 118 486 1.60e-121 362
Msa0496380 AT2G05850.1 48.000 375 181 7 54 419 117 486 2.73e-121 361
Msa0496380 AT2G24010.3 46.115 399 175 8 54 417 69 462 8.62e-120 357
Msa0496380 AT1G61130.1 46.597 382 187 6 54 420 84 463 2.37e-119 355
Msa0496380 AT1G11080.1 47.194 392 180 7 54 420 103 492 5.95e-117 350
Msa0496380 AT1G11080.2 47.194 392 180 7 54 420 103 492 6.45e-117 350
Msa0496380 AT4G15100.1 46.253 387 181 8 54 416 97 480 4.71e-114 343
Msa0496380 AT2G35770.1 47.696 369 187 5 54 417 91 458 5.16e-114 342
Msa0496380 AT5G23210.4 47.753 356 155 5 47 372 1 355 1.57e-110 330
Msa0496380 AT5G23210.3 48.424 349 149 5 54 372 104 451 5.87e-109 329
Msa0496380 AT3G17180.1 43.117 385 196 6 54 417 93 475 2.23e-103 315
Msa0496380 AT5G42240.1 42.408 382 200 8 54 417 85 464 2.16e-93 289
Msa0496380 AT2G12480.3 41.600 375 207 5 54 417 84 457 5.21e-93 288
Msa0496380 AT1G43780.1 41.623 382 204 8 54 417 90 470 2.02e-92 287
Msa0496380 AT2G33530.1 41.361 382 201 9 54 417 86 462 1.12e-90 282
Msa0496380 AT1G28110.1 41.053 380 203 8 54 417 84 458 5.05e-89 278
Msa0496380 AT1G28110.2 41.053 380 203 8 54 417 84 458 5.05e-89 278
Msa0496380 AT2G24010.4 47.260 292 140 6 54 335 69 356 2.26e-88 273
Msa0496380 AT2G12480.4 40.541 370 194 6 54 417 84 433 2.17e-87 273
Msa0496380 AT3G17180.2 41.329 346 180 6 54 378 93 436 6.68e-87 271
Msa0496380 AT2G12480.1 40.379 369 194 6 54 417 84 431 3.08e-86 270
Msa0496380 AT5G42230.1 40.576 382 207 8 54 417 81 460 2.26e-85 268
Msa0496380 AT5G42230.2 40.576 382 207 8 54 417 81 460 2.26e-85 268
Msa0496380 AT2G12480.2 40.270 370 194 7 54 417 84 432 1.76e-84 265
Msa0496380 AT2G24000.2 41.993 281 145 5 152 416 119 397 1.61e-67 220
Msa0496380 AT4G12910.1 33.172 413 223 7 54 416 88 497 5.00e-66 219
Msa0496380 AT3G25420.1 33.252 412 220 9 54 413 83 491 3.47e-65 217
Msa0496380 AT4G12910.2 32.075 371 199 7 54 374 88 455 2.90e-52 182
Msa0496380 AT2G22970.1 30.585 376 228 11 54 416 78 433 2.05e-46 166
Msa0496380 AT2G22990.1 29.679 374 236 9 54 416 76 433 2.21e-46 166
Msa0496380 AT2G22920.2 31.481 378 224 12 54 416 78 435 2.37e-46 166
Msa0496380 AT2G23000.1 32.021 381 220 14 54 416 78 437 3.03e-46 165
Msa0496380 AT2G23000.2 32.021 381 220 14 54 416 78 437 3.03e-46 165
Msa0496380 AT3G56540.1 73.529 102 26 1 54 155 132 232 3.29e-46 160
Msa0496380 AT1G73290.1 29.679 374 232 10 54 416 85 438 4.61e-44 159
Msa0496380 AT1G73300.1 29.134 381 227 12 54 416 86 441 2.40e-43 157
Msa0496380 AT1G73300.2 29.134 381 227 12 54 416 86 441 2.40e-43 157
Msa0496380 AT2G23010.2 29.459 370 244 9 54 416 78 437 2.52e-43 157
Msa0496380 AT2G23010.1 29.459 370 244 9 54 416 78 437 5.33e-43 156
Msa0496380 AT2G22970.3 31.073 354 212 10 54 394 78 412 5.72e-43 156
Msa0496380 AT1G33540.2 26.353 425 274 12 16 416 12 421 1.42e-42 155
Msa0496380 AT1G73270.2 28.989 376 234 11 54 416 86 441 1.85e-42 155
Msa0496380 AT2G22990.3 29.752 363 229 8 54 405 76 423 1.96e-42 155
Msa0496380 AT1G73270.1 28.989 376 234 11 54 416 86 441 2.40e-42 155
Msa0496380 AT1G33540.1 26.353 425 274 12 16 416 55 464 5.23e-42 154
Msa0496380 AT2G22970.4 30.769 351 211 10 54 391 78 409 5.75e-42 153
Msa0496380 AT2G22990.4 29.971 347 217 8 54 389 76 407 1.03e-41 152
Msa0496380 AT3G10450.2 27.660 376 239 10 54 416 39 394 1.81e-41 151
Msa0496380 AT2G22990.2 29.129 333 215 7 90 416 2 319 1.90e-41 149
Msa0496380 AT2G22990.6 29.129 333 215 7 90 416 2 319 3.82e-41 149
Msa0496380 AT5G36180.1 29.101 378 231 13 54 416 86 441 3.94e-41 151
Msa0496380 AT3G10450.1 27.660 376 239 10 54 416 82 437 7.67e-41 150
Msa0496380 AT2G22990.5 28.610 374 231 10 54 416 76 424 2.99e-40 149
Msa0496380 AT1G73280.1 28.609 381 229 12 54 416 86 441 6.79e-40 148
Msa0496380 AT3G12203.2 28.836 378 231 10 54 416 25 379 3.02e-39 145
Msa0496380 AT3G12203.3 28.836 378 231 10 54 416 62 416 8.74e-39 144
Msa0496380 AT3G45010.1 30.871 379 224 16 54 413 139 498 9.90e-39 146
Msa0496380 AT3G12203.1 28.836 378 231 10 54 416 83 437 1.30e-38 144
Msa0496380 AT5G36180.5 28.367 349 219 10 78 416 12 339 1.98e-38 142
Msa0496380 AT5G36180.3 28.367 349 219 10 78 416 12 339 1.98e-38 142
Msa0496380 AT2G22920.1 31.751 337 196 11 54 375 78 395 2.16e-38 143
Msa0496380 AT2G22980.1 27.926 376 234 12 54 416 79 430 4.32e-38 143
Msa0496380 AT3G12230.1 30.108 372 235 12 54 416 80 435 8.81e-38 142
Msa0496380 AT3G12220.2 31.016 374 229 13 54 416 50 405 3.01e-37 140
Msa0496380 AT1G73280.4 27.557 352 218 9 78 416 12 339 5.95e-37 138
Msa0496380 AT3G12220.1 31.016 374 229 13 54 416 80 435 8.07e-37 139
Msa0496380 AT1G73310.1 27.807 374 241 11 54 416 86 441 1.03e-36 139
Msa0496380 AT3G12240.1 30.607 379 224 15 54 416 81 436 3.05e-36 138
Msa0496380 AT3G10450.3 27.350 351 223 9 54 391 39 370 1.27e-35 135
Msa0496380 AT3G10450.4 27.350 351 223 9 54 391 82 413 3.46e-35 135
Msa0496380 AT2G22980.4 28.249 354 218 11 54 394 79 409 8.79e-35 134
Msa0496380 AT2G22980.2 28.205 351 216 11 54 391 79 406 9.96e-35 133
Msa0496380 AT5G09640.1 26.854 391 253 12 54 416 80 465 1.02e-34 134
Msa0496380 AT5G22980.1 27.882 373 241 12 54 413 136 493 1.41e-34 134
Msa0496380 AT1G73290.3 28.829 333 207 9 54 375 85 398 2.65e-34 132
Msa0496380 AT1G73280.3 27.219 338 209 9 92 416 1 314 1.01e-33 129
Msa0496380 AT3G10410.1 29.443 377 226 15 54 411 137 492 3.62e-33 130
Msa0496380 AT5G36180.2 27.778 324 204 9 78 391 12 315 3.85e-33 127
Msa0496380 AT1G73310.2 27.300 337 217 10 54 379 86 405 1.60e-29 119
Msa0496380 AT2G22980.5 26.452 310 198 8 90 391 2 289 3.57e-29 115
Msa0496380 AT5G36180.4 26.393 341 208 11 78 396 12 331 2.16e-28 114
Msa0496380 AT2G22920.4 32.016 253 142 8 54 293 78 313 4.35e-28 113
Msa0496380 AT1G15000.1 29.111 371 234 12 54 416 77 426 1.00e-27 114
Msa0496380 AT1G73310.3 26.623 308 204 7 78 379 12 303 6.53e-27 110
Msa0496380 AT2G22970.2 32.016 253 141 9 54 293 78 312 1.96e-26 108
Msa0496380 AT3G12220.3 27.717 368 197 12 54 416 80 383 3.82e-26 109
Msa0496380 AT1G73290.2 30.622 209 138 4 54 257 85 291 3.60e-25 105
Msa0496380 AT2G22920.3 28.676 272 166 8 155 416 3 256 5.50e-24 100
Msa0496380 AT1G73280.2 31.401 207 133 5 54 253 86 290 7.90e-22 97.1
Msa0496380 AT2G22980.3 28.788 264 154 10 54 304 79 321 2.74e-21 95.1
Msa0496380 AT2G22960.1 31.298 131 87 3 286 416 57 184 1.13e-14 72.4
Msa0496380 AT5G22960.1 39.773 88 52 1 90 177 88 174 1.71e-13 69.3

Find 100 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATCATGCATTTCTTAAA+TGG 0.183548 3_4:+27076443 Msa0496380:CDS
ATCTCCTAAATAATGGATTA+AGG 0.214407 3_4:+27074919 Msa0496380:CDS
ACACCCTTAATCCATTATTT+AGG 0.234717 3_4:-27074923 None:intergenic
TCATATAATCTTTGAGTAAT+AGG 0.237761 3_4:-27076476 None:intergenic
TATTTAGGAGATCATGTAAA+AGG 0.240154 3_4:-27074908 None:intergenic
TTGGTATCCTTGGTTCTTTA+AGG 0.242541 3_4:+27075726 Msa0496380:CDS
TTACATGATCTCCTAAATAA+TGG 0.284485 3_4:+27074912 Msa0496380:CDS
TATCAACCTCAAAGGAATTA+TGG 0.285850 3_4:+27072570 Msa0496380:CDS
TCCTCAAGAAGCGTGAATTA+TGG 0.295603 3_4:-27070815 None:intergenic
TTTCAACCGGGGTGATGTTC+AGG 0.313976 3_4:+27074788 Msa0496380:CDS
TATTCTCTACCATAATAAAA+AGG 0.316186 3_4:+27072534 Msa0496380:CDS
AATCTTACCGAGACCTTCTT+CGG 0.326035 3_4:-27074223 None:intergenic
GAATATTTGGTTGCAGTAAC+AGG 0.337086 3_4:-27075670 None:intergenic
AAATCTCTATTCTTATATTC+AGG 0.337407 3_4:-27072457 None:intergenic
AATAGAGATTTCTACATTGC+TGG 0.337904 3_4:+27072469 Msa0496380:CDS
CACGCTTCTTGAGGATTTCC+CGG 0.343752 3_4:+27070823 Msa0496380:CDS
CCTCAAGAAGCGTGAATTAT+GGG 0.347929 3_4:-27070814 None:intergenic
AATAACTATTCATGGAACTA+TGG 0.364693 3_4:+27071631 Msa0496380:CDS
GCAGTACTATCATTCCAAAC+TGG 0.365422 3_4:+27074859 Msa0496380:CDS
TGGTATCCTTGGTTCTTTAA+GGG 0.366747 3_4:+27075727 Msa0496380:CDS
TTGTTCCTTGAGTCACCAGC+TGG 0.368740 3_4:+27072328 Msa0496380:CDS
ATGTACAAGCATATTTCAAC+CGG 0.390329 3_4:+27074775 Msa0496380:CDS
CACATACCATAATTCCTTTG+AGG 0.398233 3_4:-27072576 None:intergenic
ACTGCACTCAGTAGTTTGAT+TGG 0.398551 3_4:-27074107 None:intergenic
ATTAGAGAGAGGGCTCTTGC+TGG 0.402496 3_4:-27076425 None:intergenic
GCTCTTGCTGGCTGGTAGCT+TGG 0.404279 3_4:-27076413 None:intergenic
TCTCCTAAATAATGGATTAA+GGG 0.422435 3_4:+27074920 Msa0496380:CDS
TTGAGACAACTTGGTATCCT+TGG 0.423312 3_4:+27075716 Msa0496380:CDS
CATCTGATTATGACACCAAT+GGG 0.439702 3_4:+27072377 Msa0496380:CDS
TAAATAATGGATTAAGGGTG+TGG 0.440591 3_4:+27074925 Msa0496380:CDS
CCTTCCGCGTGAAGAGTAAT+GGG 0.450619 3_4:+27071593 Msa0496380:CDS
ATTTAGGAGATCATGTAAAA+GGG 0.453835 3_4:-27074907 None:intergenic
CCCTTCCGCGTGAAGAGTAA+TGG 0.455012 3_4:+27071592 Msa0496380:CDS
AAAAGGGGAATGATTGTTGT+AGG 0.458938 3_4:-27074891 None:intergenic
CCCATTACTCTTCACGCGGA+AGG 0.462314 3_4:-27071593 None:intergenic
GGATGCTCATCTCTTGCCTA+TGG 0.462686 3_4:+27071550 Msa0496380:CDS
GAATATTGTGTGCAAGTTGA+GGG 0.463337 3_4:-27072516 None:intergenic
TTTCATGTGAAACAGGTTGC+TGG 0.463493 3_4:+27076326 Msa0496380:intron
TCACGAAGCTCGAGTATGAC+TGG 0.464429 3_4:+27074829 Msa0496380:CDS
TGCTGTTCTTCTATCCCCAT+TGG 0.474400 3_4:-27072392 None:intergenic
TCCTTGGTTCTTTAAGGGAG+AGG 0.476535 3_4:+27075732 Msa0496380:CDS
AACTTCTTGCATTGCTCCAT+AGG 0.478248 3_4:-27071566 None:intergenic
GGATACCAAGTTGTCTCAAT+GGG 0.492752 3_4:-27075712 None:intergenic
CCCATAATTCACGCTTCTTG+AGG 0.496016 3_4:+27070814 Msa0496380:CDS
CAGTACTATCATTCCAAACT+GGG 0.497009 3_4:+27074860 Msa0496380:CDS
AGGATACCAAGTTGTCTCAA+TGG 0.497971 3_4:-27075713 None:intergenic
AATCTTTGAGTAATAGGAAG+AGG 0.499019 3_4:-27076470 None:intergenic
CTTCGTGACATTGGCATGGA+GGG 0.500798 3_4:-27074814 None:intergenic
AGCTTCCCATTGAGACAACT+TGG 0.503838 3_4:+27075707 Msa0496380:CDS
TTGTATACAACATGCACGCC+GGG 0.505513 3_4:-27070841 None:intergenic
TGATACAGTGGTGATATAGA+TGG 0.510610 3_4:+27075640 Msa0496380:intron
CCATTACTCTTCACGCGGAA+GGG 0.517105 3_4:-27071592 None:intergenic
TAGGCAAGAGATGAGCATCC+AGG 0.518987 3_4:-27071547 None:intergenic
CATAGATGTTGTATATATCA+AGG 0.519966 3_4:-27074165 None:intergenic
GTTTGGAATGATAGTACTGC+AGG 0.522006 3_4:-27074856 None:intergenic
TGGCTATGCTGAAGTATACA+AGG 0.522187 3_4:+27076346 Msa0496380:CDS
TATGGAGCAATGCAAGAAGT+TGG 0.522491 3_4:+27071568 Msa0496380:CDS
GAGAGAGGGCTCTTGCTGGC+TGG 0.525147 3_4:-27076421 None:intergenic
TTTGCCACAGTGAGAGAAGC+AGG 0.525820 3_4:+27076380 Msa0496380:CDS
AGAAATGCATGATTAGAGAG+AGG 0.526076 3_4:-27076436 None:intergenic
TATGAATATCCTACCCCAGC+TGG 0.526508 3_4:-27072343 None:intergenic
TGTTCCTTGAGTCACCAGCT+GGG 0.529355 3_4:+27072329 Msa0496380:CDS
CCTCACTAACCGTCCGAAGA+AGG 0.531528 3_4:+27074210 Msa0496380:CDS
ATACTCGAGCTTCGTGACAT+TGG 0.540397 3_4:-27074823 None:intergenic
AAGCACAGAAATGTGAAGAA+TGG 0.545384 3_4:+27070778 Msa0496380:CDS
AGAATATTGTGTGCAAGTTG+AGG 0.547975 3_4:-27072517 None:intergenic
ATTGCTGGAGAAAGTTATGC+TGG 0.550938 3_4:+27072484 Msa0496380:CDS
TTTAGGAGATCATGTAAAAG+GGG 0.554157 3_4:-27074906 None:intergenic
TCATCTGATTATGACACCAA+TGG 0.557427 3_4:+27072376 Msa0496380:CDS
CAGTGGTGATATAGATGGAA+GGG 0.568514 3_4:+27075645 Msa0496380:intron
TAACCGTCCGAAGAAGGTCT+CGG 0.569746 3_4:+27074216 Msa0496380:CDS
GTGCTTCACTCATAACCTTG+TGG 0.572306 3_4:-27070761 None:intergenic
CACGAAGCTCGAGTATGACT+GGG 0.574661 3_4:+27074830 Msa0496380:CDS
CCTTCTTCGGACGGTTAGTG+AGG 0.576121 3_4:-27074210 None:intergenic
AAATAATGGATTAAGGGTGT+GGG 0.586338 3_4:+27074926 Msa0496380:CDS
CTTGAGTCACCAGCTGGGGT+AGG 0.589727 3_4:+27072334 Msa0496380:CDS
GAAATGCATGATTAGAGAGA+GGG 0.590622 3_4:-27076435 None:intergenic
TGTACATAATCGTCACTGCA+TGG 0.591663 3_4:-27074759 None:intergenic
CTACCCCAGCTGGTGACTCA+AGG 0.594175 3_4:-27072333 None:intergenic
GTTCCTTGAGTCACCAGCTG+GGG 0.594245 3_4:+27072330 Msa0496380:CDS
ACCTCTCCCTTAAAGAACCA+AGG 0.595237 3_4:-27075733 None:intergenic
CTTGTATACAACATGCACGC+CGG 0.596727 3_4:-27070842 None:intergenic
GCTTCGTGACATTGGCATGG+AGG 0.601762 3_4:-27074815 None:intergenic
CGAGCTTCGTGACATTGGCA+TGG 0.603622 3_4:-27074818 None:intergenic
AGGACAATTATCAACCTCAA+AGG 0.606041 3_4:+27072562 Msa0496380:CDS
AGGTTGTGATTAGTGCAGAC+TGG 0.606106 3_4:-27074190 None:intergenic
ACAGTGGTGATATAGATGGA+AGG 0.610436 3_4:+27075644 Msa0496380:intron
TGTACAAGCATATTTCAACC+GGG 0.611855 3_4:+27074776 Msa0496380:CDS
GTACTATCATTCCAAACTGG+GGG 0.612094 3_4:+27074862 Msa0496380:CDS
CAACCGGGGTGATGTTCAGG+AGG 0.629672 3_4:+27074791 Msa0496380:CDS
GGGCCTCCTGAACATCACCC+CGG 0.634891 3_4:-27074794 None:intergenic
TTACCGAGACCTTCTTCGGA+CGG 0.636338 3_4:-27074219 None:intergenic
GGCTATGCTGAAGTATACAA+GGG 0.656209 3_4:+27076347 Msa0496380:CDS
AATGACGACACAGATGAACA+AGG 0.666799 3_4:+27073998 Msa0496380:CDS
AGTACTATCATTCCAAACTG+GGG 0.684965 3_4:+27074861 Msa0496380:CDS
GTACAAGCATATTTCAACCG+GGG 0.691004 3_4:+27074777 Msa0496380:CDS
ATGTCCTGCTTCTCTCACTG+TGG 0.691209 3_4:-27076384 None:intergenic
TATGCTGAAGTATACAAGGG+AGG 0.695333 3_4:+27076350 Msa0496380:CDS
TACTATCATTCCAAACTGGG+GGG 0.701562 3_4:+27074863 Msa0496380:CDS
ATCTGATTATGACACCAATG+GGG 0.750512 3_4:+27072378 Msa0496380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTAATTTTAATTATAA+TGG + chr3_4:27073628-27073647 Msa0496380:intron 0.0%
!! GACTATAAATTAAAAATAAA+GGG - chr3_4:27070995-27071014 None:intergenic 10.0%
!! TGACTATAAATTAAAAATAA+AGG - chr3_4:27070996-27071015 None:intergenic 10.0%
!! TATATCTTATATTCATATTT+CGG - chr3_4:27071226-27071245 None:intergenic 10.0%
!!! ATGAAATTATATAGTTTTTT+AGG + chr3_4:27071432-27071451 Msa0496380:intron 10.0%
!!! TTGCATATTTTTTTTTTTTT+TGG - chr3_4:27072093-27072112 None:intergenic 10.0%
!!! CATTTTTTTTTTAACAAAAA+TGG + chr3_4:27073077-27073096 Msa0496380:intron 10.0%
!! TTAGTTGAATAATAATAATA+AGG + chr3_4:27073740-27073759 Msa0496380:intron 10.0%
!!! TTTTTTTTATTTGTAAAGAA+AGG - chr3_4:27074471-27074490 None:intergenic 10.0%
!!! ATTTAATTTTTCCATTTATT+TGG - chr3_4:27074674-27074693 None:intergenic 10.0%
!!! AACATCTTTTATTTTATTTT+GGG - chr3_4:27075577-27075596 None:intergenic 10.0%
!!! AAACATCTTTTATTTTATTT+TGG - chr3_4:27075578-27075597 None:intergenic 10.0%
!!! TTAATTAATGTGTCTTTTAT+AGG + chr3_4:27070954-27070973 Msa0496380:intron 15.0%
!!! TTTTTTATGCTATCAAAAAT+GGG - chr3_4:27071267-27071286 None:intergenic 15.0%
!! AATATATGTTATTGTAGTAA+AGG + chr3_4:27071345-27071364 Msa0496380:intron 15.0%
!!! TTATATAGTTTTTTAGGAAA+TGG + chr3_4:27071438-27071457 Msa0496380:intron 15.0%
!!! TATATAGTTTTTTAGGAAAT+GGG + chr3_4:27071439-27071458 Msa0496380:intron 15.0%
!!! TATTTTTTTTTTTTTTGGTC+AGG - chr3_4:27072088-27072107 None:intergenic 15.0%
!!! TTTTCTTATTTAATTTTGGT+CGG + chr3_4:27072234-27072253 Msa0496380:intron 15.0%
!!! ACTATATTTTTTTAGTGAAT+TGG + chr3_4:27072422-27072441 Msa0496380:CDS 15.0%
!! GAAATAAAAAATATAAAGGT+GGG - chr3_4:27072987-27073006 None:intergenic 15.0%
!! AGTGGAAATAAAAAATATAA+AGG - chr3_4:27072991-27073010 None:intergenic 15.0%
!!! TTTTTCTTTTGTTATAAGAT+TGG + chr3_4:27073104-27073123 Msa0496380:intron 15.0%
!!! TTTTCTTTTGTTATAAGATT+GGG + chr3_4:27073105-27073124 Msa0496380:intron 15.0%
!!! GTTTATTAAATTTTGAATCA+TGG + chr3_4:27073236-27073255 Msa0496380:intron 15.0%
!!! TTTCTTATTTCATTTTTAAC+TGG + chr3_4:27073549-27073568 Msa0496380:intron 15.0%
!!! TTCTTATTTCATTTTTAACT+GGG + chr3_4:27073550-27073569 Msa0496380:intron 15.0%
!! AATGATAAAAAATATGTGAA+TGG + chr3_4:27073900-27073919 Msa0496380:intron 15.0%
!! TTATATTATATGCATAGATT+GGG + chr3_4:27073963-27073982 Msa0496380:intron 15.0%
!!! ACTTTTGACAAAAAAATAAA+AGG + chr3_4:27075270-27075289 Msa0496380:intron 15.0%
!!! CTTTTGACAAAAAAATAAAA+GGG + chr3_4:27075271-27075290 Msa0496380:intron 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG - chr3_4:27075503-27075522 None:intergenic 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG - chr3_4:27075502-27075521 None:intergenic 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG + chr3_4:27075502-27075521 Msa0496380:intron 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG + chr3_4:27075503-27075522 Msa0496380:intron 15.0%
!! AAAGAAATAAAATAAGTCAC+CGG + chr3_4:27070880-27070899 Msa0496380:intron 20.0%
!! TTCTCAATAAATTCTTATAC+CGG - chr3_4:27070902-27070921 None:intergenic 20.0%
!! ATGTTAAATGTTAATTAAGC+TGG + chr3_4:27071070-27071089 Msa0496380:intron 20.0%
!!! CTTTTTTATGCTATCAAAAA+TGG - chr3_4:27071268-27071287 None:intergenic 20.0%
!!! ATTTTTCATTTCTCTTTCAA+AGG + chr3_4:27071523-27071542 Msa0496380:intron 20.0%
!!! TGAATAGTTATTTTTGTGAA+GGG - chr3_4:27071623-27071642 None:intergenic 20.0%
!!! ATGAATAGTTATTTTTGTGA+AGG - chr3_4:27071624-27071643 None:intergenic 20.0%
!! TTCACAAAAATAACTATTCA+TGG + chr3_4:27071623-27071642 Msa0496380:CDS 20.0%
!!! GATCAAAAAGAGTATTTTTT+CGG + chr3_4:27072147-27072166 Msa0496380:intron 20.0%
!! AAATCTCTATTCTTATATTC+AGG - chr3_4:27072460-27072479 None:intergenic 20.0%
!! TATTCTCTACCATAATAAAA+AGG + chr3_4:27072534-27072553 Msa0496380:CDS 20.0%
!!! CAATTTGATAGCAAATAAAA+GGG - chr3_4:27072619-27072638 None:intergenic 20.0%
!! AAAATTACAGCTAATCTAAT+AGG + chr3_4:27072718-27072737 Msa0496380:intron 20.0%
!! GGAAATAAAAAATATAAAGG+TGG - chr3_4:27072988-27073007 None:intergenic 20.0%
!!! TTGGCTATTTTTTTTGTTTT+AGG + chr3_4:27073286-27073305 Msa0496380:intron 20.0%
!!! TTGTTGATGTTTTTTCTTTT+TGG + chr3_4:27073512-27073531 Msa0496380:intron 20.0%
!!! TGTTGATGTTTTTTCTTTTT+GGG + chr3_4:27073513-27073532 Msa0496380:intron 20.0%
!! ATGTATCTAAACACAAAAAT+TGG - chr3_4:27073709-27073728 None:intergenic 20.0%
!! TATAATGTAATTATGTGCTT+TGG - chr3_4:27073780-27073799 None:intergenic 20.0%
!! ACTCAAATAAAATGTATGAA+TGG + chr3_4:27073869-27073888 Msa0496380:intron 20.0%
!! GTTATATTATATGCATAGAT+TGG + chr3_4:27073962-27073981 Msa0496380:intron 20.0%
!! ATGTTTCATTAAAGCAATTA+GGG + chr3_4:27074276-27074295 Msa0496380:intron 20.0%
!!! GCTAGTTTTATATATTGTAA+GGG + chr3_4:27074326-27074345 Msa0496380:intron 20.0%
!!! CTAGTTTTATATATTGTAAG+GGG + chr3_4:27074327-27074346 Msa0496380:intron 20.0%
!! AATATGATGAATATATCATC+AGG + chr3_4:27074350-27074369 Msa0496380:intron 20.0%
!! ATTAGTTCAAACCAAATAAA+TGG + chr3_4:27074660-27074679 Msa0496380:intron 20.0%
!! AATATTATCAAAAGACAAAG+AGG - chr3_4:27075010-27075029 None:intergenic 20.0%
!! CAAGATTGTTAGAATAAAAA+GGG - chr3_4:27075063-27075082 None:intergenic 20.0%
!! AAAAGGGTTAATTAAGTAAA+TGG + chr3_4:27075287-27075306 Msa0496380:intron 20.0%
!! CAAAATTCTGAATATTTACA+GGG - chr3_4:27075314-27075333 None:intergenic 20.0%
!! ACAAAATTCTGAATATTTAC+AGG - chr3_4:27075315-27075334 None:intergenic 20.0%
!!! CGATGATGAAAAATTTTATA+AGG - chr3_4:27075374-27075393 None:intergenic 20.0%
!!! GCTAATGGAAAAATTTTATA+GGG - chr3_4:27075405-27075424 None:intergenic 20.0%
!!! TGCTAATGGAAAAATTTTAT+AGG - chr3_4:27075406-27075425 None:intergenic 20.0%
!!! GTTGATGGAAATTTTTTTTA+GGG - chr3_4:27075437-27075456 None:intergenic 20.0%
!!! TGTTGATGGAAATTTTTTTT+AGG - chr3_4:27075438-27075457 None:intergenic 20.0%
!!! AAAATTTCCATCAACATTTT+TGG + chr3_4:27075442-27075461 Msa0496380:intron 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr3_4:27075533-27075552 Msa0496380:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr3_4:27075534-27075553 Msa0496380:intron 20.0%
!! ATATAATACTTATGGAAACA+AGG - chr3_4:27075819-27075838 None:intergenic 20.0%
!!! GTATAATTAACATTTTGTTG+GGG - chr3_4:27075868-27075887 None:intergenic 20.0%
!!! CGTATAATTAACATTTTGTT+GGG - chr3_4:27075869-27075888 None:intergenic 20.0%
!!! TCGTATAATTAACATTTTGT+TGG - chr3_4:27075870-27075889 None:intergenic 20.0%
!!! TTAATATGAACATTTTGTGA+TGG + chr3_4:27076301-27076320 Msa0496380:intron 20.0%
!! TCATATAATCTTTGAGTAAT+AGG - chr3_4:27076479-27076498 None:intergenic 20.0%
! TAAATTCGCTAAAAACAAAG+AGG + chr3_4:27070707-27070726 Msa0496380:CDS 25.0%
!! ACTCAATATTTTATACCACA+AGG + chr3_4:27070746-27070765 Msa0496380:CDS 25.0%
!!! TTATAGTCATTTTCTGATGA+TGG + chr3_4:27071007-27071026 Msa0496380:intron 25.0%
! ATTTAACATACACATGACTT+GGG - chr3_4:27071059-27071078 None:intergenic 25.0%
! ATATAATTACATCAAGTGGA+GGG - chr3_4:27071178-27071197 None:intergenic 25.0%
! AATATAATTACATCAAGTGG+AGG - chr3_4:27071179-27071198 None:intergenic 25.0%
! TCGAATATAATTACATCAAG+TGG - chr3_4:27071182-27071201 None:intergenic 25.0%
! AATAACTATTCATGGAACTA+TGG + chr3_4:27071631-27071650 Msa0496380:CDS 25.0%
!! AAAAAGAGTTGATCAATTTG+AGG - chr3_4:27071669-27071688 None:intergenic 25.0%
!! TTCATTTTCTTCAATAGTGT+CGG + chr3_4:27071864-27071883 Msa0496380:intron 25.0%
! TGATAAAGAAGATCAATTTG+AGG - chr3_4:27071930-27071949 None:intergenic 25.0%
! ACAATGCATTATTATATGCA+GGG + chr3_4:27071996-27072015 Msa0496380:intron 25.0%
! ACATTATAAGGTGAATAAGT+GGG - chr3_4:27072045-27072064 None:intergenic 25.0%
! ACCATAATAAAAAGGCTAAT+AGG + chr3_4:27072542-27072561 Msa0496380:CDS 25.0%
!!! TCCTATTAGCCTTTTTATTA+TGG - chr3_4:27072546-27072565 None:intergenic 25.0%
!! CCAATTTGATAGCAAATAAA+AGG - chr3_4:27072620-27072639 None:intergenic 25.0%
!!! CCTTTTATTTGCTATCAAAT+TGG + chr3_4:27072617-27072636 Msa0496380:intron 25.0%
! TGTCCATGATTTATGTTTAA+GGG - chr3_4:27072688-27072707 None:intergenic 25.0%
! ATGTCCATGATTTATGTTTA+AGG - chr3_4:27072689-27072708 None:intergenic 25.0%
! ATTTCTCAATTACATCATGA+TGG + chr3_4:27072750-27072769 Msa0496380:intron 25.0%
!! TGATGGTGAAAAGTAAAATT+AGG + chr3_4:27072767-27072786 Msa0496380:intron 25.0%
! GTAATGTCACATCATATTTA+TGG + chr3_4:27072917-27072936 Msa0496380:intron 25.0%
! ATTGGGTTTCCAAATTTATT+TGG + chr3_4:27073122-27073141 Msa0496380:intron 25.0%
! ATGTAACAACTAACATTGAA+TGG + chr3_4:27073339-27073358 Msa0496380:intron 25.0%
! CATTATAGATAGATATGTCA+AGG + chr3_4:27073416-27073435 Msa0496380:intron 25.0%
!!! TAGTTGATGATGTTTTGTTT+TGG + chr3_4:27073482-27073501 Msa0496380:intron 25.0%
! CATAGATGTTGTATATATCA+AGG - chr3_4:27074168-27074187 None:intergenic 25.0%
! GATGTTTCATTAAAGCAATT+AGG + chr3_4:27074275-27074294 Msa0496380:intron 25.0%
!!! CGCTAGTTTTATATATTGTA+AGG + chr3_4:27074325-27074344 Msa0496380:intron 25.0%
! TCAACTTAAATATTTCAGAG+TGG + chr3_4:27074562-27074581 Msa0496380:intron 25.0%
! ATTTAATCATTATTGTACGC+AGG + chr3_4:27074725-27074744 Msa0496380:intron 25.0%
! ATTTAGGAGATCATGTAAAA+GGG - chr3_4:27074910-27074929 None:intergenic 25.0%
! TATTTAGGAGATCATGTAAA+AGG - chr3_4:27074911-27074930 None:intergenic 25.0%
! TTACATGATCTCCTAAATAA+TGG + chr3_4:27074912-27074931 Msa0496380:CDS 25.0%
!!! ATCTCCTAAATAATGGATTA+AGG + chr3_4:27074919-27074938 Msa0496380:CDS 25.0%
!!! TCTCCTAAATAATGGATTAA+GGG + chr3_4:27074920-27074939 Msa0496380:CDS 25.0%
! CCAAGATTGTTAGAATAAAA+AGG - chr3_4:27075064-27075083 None:intergenic 25.0%
!! CCTTTTTATTCTAACAATCT+TGG + chr3_4:27075061-27075080 Msa0496380:intron 25.0%
!! ATTTTAAATGTGAAGAAGTG+GGG - chr3_4:27075227-27075246 None:intergenic 25.0%
!! CATTTTAAATGTGAAGAAGT+GGG - chr3_4:27075228-27075247 None:intergenic 25.0%
!! ACATTTTAAATGTGAAGAAG+TGG - chr3_4:27075229-27075248 None:intergenic 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr3_4:27075469-27075488 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr3_4:27075470-27075489 None:intergenic 25.0%
! TTATCTATTGTATGATACAG+TGG + chr3_4:27075628-27075647 Msa0496380:intron 25.0%
!!! AAAAGAAACTTTGAGTTGAT+AGG - chr3_4:27076082-27076101 None:intergenic 25.0%
!!! TCAACTCAAAGTTTCTTTTT+TGG + chr3_4:27076083-27076102 Msa0496380:intron 25.0%
!! ATGAAAAAAGTGTAGTTGAA+AGG - chr3_4:27076198-27076217 None:intergenic 25.0%
! CTAATCATGCATTTCTTAAA+TGG + chr3_4:27076443-27076462 Msa0496380:CDS 25.0%
!! GAATTATGGGATTTTAACAC+TGG - chr3_4:27070804-27070823 None:intergenic 30.0%
CATTTAACATACACATGACT+TGG - chr3_4:27071060-27071079 None:intergenic 30.0%
GACAATGCATTATTATATGC+AGG + chr3_4:27071995-27072014 Msa0496380:intron 30.0%
CAATGCATTATTATATGCAG+GGG + chr3_4:27071997-27072016 Msa0496380:intron 30.0%
CATTATAAGGTGAATAAGTG+GGG - chr3_4:27072044-27072063 None:intergenic 30.0%
CACATTATAAGGTGAATAAG+TGG - chr3_4:27072046-27072065 None:intergenic 30.0%
TGGCTAGAATTCACATTATA+AGG - chr3_4:27072057-27072076 None:intergenic 30.0%
AATAGAGATTTCTACATTGC+TGG + chr3_4:27072469-27072488 Msa0496380:CDS 30.0%
TATCAACCTCAAAGGAATTA+TGG + chr3_4:27072570-27072589 Msa0496380:CDS 30.0%
ATGCCCTTAAACATAAATCA+TGG + chr3_4:27072682-27072701 Msa0496380:intron 30.0%
CTAAAAAAAACCGTCGAAAA+TGG - chr3_4:27072859-27072878 None:intergenic 30.0%
TTTCAGAGACTACTAATAGA+TGG + chr3_4:27072890-27072909 Msa0496380:intron 30.0%
TTTCCAAATTTATTTGGTCC+AGG + chr3_4:27073128-27073147 Msa0496380:intron 30.0%
AATCCTGGACCAAATAAATT+TGG - chr3_4:27073134-27073153 None:intergenic 30.0%
AAATTTATTTGGTCCAGGAT+TGG + chr3_4:27073133-27073152 Msa0496380:intron 30.0%
TCCTTTGTCTGTAATATCAT+TGG + chr3_4:27073267-27073286 Msa0496380:intron 30.0%
!! TTTTAGGTGCTAGTATATCA+TGG + chr3_4:27073302-27073321 Msa0496380:intron 30.0%
AACATTGAATGGTCTCTATA+TGG + chr3_4:27073350-27073369 Msa0496380:intron 30.0%
TCTATCTATAATGTCTAACC+AGG - chr3_4:27073409-27073428 None:intergenic 30.0%
ATAATAATAAGGCAGCAGAT+TGG + chr3_4:27073751-27073770 Msa0496380:intron 30.0%
! AAATTTCATGCCACTTGAAA+GGG - chr3_4:27074255-27074274 None:intergenic 30.0%
TTCATTAAAGCAATTAGGGT+CGG + chr3_4:27074280-27074299 Msa0496380:intron 30.0%
!!! GAGTGTTTTTTTATTGGTCT+AGG + chr3_4:27074396-27074415 Msa0496380:intron 30.0%
AGCAATCATATAAGCCATTA+GGG - chr3_4:27074522-27074541 None:intergenic 30.0%
AAGCAATCATATAAGCCATT+AGG - chr3_4:27074523-27074542 None:intergenic 30.0%
! TTACTATGGCCTTAACTTAT+AGG + chr3_4:27074622-27074641 Msa0496380:intron 30.0%
CTTACTAATTTGAGTAGAGT+CGG - chr3_4:27074704-27074723 None:intergenic 30.0%
ATGTACAAGCATATTTCAAC+CGG + chr3_4:27074775-27074794 Msa0496380:CDS 30.0%
TTTAGGAGATCATGTAAAAG+GGG - chr3_4:27074909-27074928 None:intergenic 30.0%
ACACCCTTAATCCATTATTT+AGG - chr3_4:27074926-27074945 None:intergenic 30.0%
!! TAAATAATGGATTAAGGGTG+TGG + chr3_4:27074925-27074944 Msa0496380:CDS 30.0%
!! AAATAATGGATTAAGGGTGT+GGG + chr3_4:27074926-27074945 Msa0496380:CDS 30.0%
TTCTCTTTACTTATGACTGT+AGG + chr3_4:27074966-27074985 Msa0496380:intron 30.0%
TCTCTTTACTTATGACTGTA+GGG + chr3_4:27074967-27074986 Msa0496380:intron 30.0%
GACATTGGATAATATATGCA+GGG + chr3_4:27075179-27075198 Msa0496380:intron 30.0%
! TTTTGTCAAAAGTAGCATAG+TGG - chr3_4:27075263-27075282 None:intergenic 30.0%
TTAGGGACTAAAAATGCTAA+TGG - chr3_4:27075420-27075439 None:intergenic 30.0%
! AATTAACATTTTGTTGGGGT+GGG - chr3_4:27075864-27075883 None:intergenic 30.0%
! TAATTAACATTTTGTTGGGG+TGG - chr3_4:27075865-27075884 None:intergenic 30.0%
GTCACTAAACATAATGATGA+AGG + chr3_4:27075996-27076015 Msa0496380:intron 30.0%
TATATTTGTCTGAGTGAAAC+TGG - chr3_4:27076259-27076278 None:intergenic 30.0%
AATCTTTGAGTAATAGGAAG+AGG - chr3_4:27076473-27076492 None:intergenic 30.0%
AAGCACAGAAATGTGAAGAA+TGG + chr3_4:27070778-27070797 Msa0496380:CDS 35.0%
! ATGTGTCTTTTATAGGCAAG+TGG + chr3_4:27070961-27070980 Msa0496380:intron 35.0%
! ACTCTTTTTCTCAGAACAGA+TGG + chr3_4:27071680-27071699 Msa0496380:intron 35.0%
TAATGTGAATTCTAGCCACT+AGG + chr3_4:27072059-27072078 Msa0496380:intron 35.0%
TCATCTGATTATGACACCAA+TGG + chr3_4:27072376-27072395 Msa0496380:CDS 35.0%
CATCTGATTATGACACCAAT+GGG + chr3_4:27072377-27072396 Msa0496380:CDS 35.0%
ATCTGATTATGACACCAATG+GGG + chr3_4:27072378-27072397 Msa0496380:CDS 35.0%
! GAATATTGTGTGCAAGTTGA+GGG - chr3_4:27072519-27072538 None:intergenic 35.0%
AGAATATTGTGTGCAAGTTG+AGG - chr3_4:27072520-27072539 None:intergenic 35.0%
AGGACAATTATCAACCTCAA+AGG + chr3_4:27072562-27072581 Msa0496380:CDS 35.0%
CACATACCATAATTCCTTTG+AGG - chr3_4:27072579-27072598 None:intergenic 35.0%
! TTAAGGGCATAATCAACACA+TGG - chr3_4:27072672-27072691 None:intergenic 35.0%
!! TTGTCTAAGACCATTTTCGA+CGG + chr3_4:27072846-27072865 Msa0496380:intron 35.0%
! GAATTTGAGACAGCATTAAG+TGG - chr3_4:27073009-27073028 None:intergenic 35.0%
! CTTTGTTTCATCCATATGAG+TGG - chr3_4:27073163-27073182 None:intergenic 35.0%
GCCAATGATATTACAGACAA+AGG - chr3_4:27073271-27073290 None:intergenic 35.0%
TCTCTATATGGTCCATAAGT+GGG + chr3_4:27073362-27073381 Msa0496380:intron 35.0%
AGGAACATCCATACTAACTA+TGG - chr3_4:27073389-27073408 None:intergenic 35.0%
ATAGTTAGTATGGATGTTCC+TGG + chr3_4:27073388-27073407 Msa0496380:intron 35.0%
!!! GATGATGTTTTGTTTTGGTG+AGG + chr3_4:27073487-27073506 Msa0496380:intron 35.0%
! TGGGCTCAAAAAATGTGTTT+TGG + chr3_4:27073569-27073588 Msa0496380:intron 35.0%
GATTCAAATTCCCTTTCAAG+TGG + chr3_4:27074242-27074261 Msa0496380:intron 35.0%
! CAAATTTCATGCCACTTGAA+AGG - chr3_4:27074256-27074275 None:intergenic 35.0%
!!! TGCGTCGAGTGTTTTTTTAT+TGG + chr3_4:27074390-27074409 Msa0496380:intron 35.0%
TATCTGAAGGAAATCAAGAC+CGG - chr3_4:27074431-27074450 None:intergenic 35.0%
AGTTGTACTTTCGTATCTGA+AGG - chr3_4:27074444-27074463 None:intergenic 35.0%
ACTCACAAAACAAACCCTAA+TGG + chr3_4:27074505-27074524 Msa0496380:intron 35.0%
! ATCACACACGTCTTTTACTA+TGG + chr3_4:27074608-27074627 Msa0496380:intron 35.0%
CTTGTTCAGCCTATAAGTTA+AGG - chr3_4:27074634-27074653 None:intergenic 35.0%
TGTACAAGCATATTTCAACC+GGG + chr3_4:27074776-27074795 Msa0496380:CDS 35.0%
CAGTACTATCATTCCAAACT+GGG + chr3_4:27074860-27074879 Msa0496380:CDS 35.0%
AGTACTATCATTCCAAACTG+GGG + chr3_4:27074861-27074880 Msa0496380:CDS 35.0%
AAAAGGGGAATGATTGTTGT+AGG - chr3_4:27074894-27074913 None:intergenic 35.0%
TATCAATTGAGCTAAGCTCA+GGG - chr3_4:27075157-27075176 None:intergenic 35.0%
TGAGCTTAGCTCAATTGATA+GGG + chr3_4:27075157-27075176 Msa0496380:intron 35.0%
GGACATTGGATAATATATGC+AGG + chr3_4:27075178-27075197 Msa0496380:intron 35.0%
TTAGGGACCAAAAATGTTGA+TGG - chr3_4:27075452-27075471 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr3_4:27075460-27075479 Msa0496380:intron 35.0%
ATGCTTAAGGAAAATGTCAC+AGG + chr3_4:27075473-27075492 Msa0496380:intron 35.0%
TGCTTAAGGAAAATGTCACA+GGG + chr3_4:27075474-27075493 Msa0496380:intron 35.0%
TGATACAGTGGTGATATAGA+TGG + chr3_4:27075640-27075659 Msa0496380:intron 35.0%
GAATATTTGGTTGCAGTAAC+AGG - chr3_4:27075673-27075692 None:intergenic 35.0%
! TTGGTATCCTTGGTTCTTTA+AGG + chr3_4:27075726-27075745 Msa0496380:CDS 35.0%
! TGGTATCCTTGGTTCTTTAA+GGG + chr3_4:27075727-27075746 Msa0496380:CDS 35.0%
ATATGACTTACCACCTTTAG+TGG + chr3_4:27076165-27076184 Msa0496380:intron 35.0%
TATGACTTACCACCTTTAGT+GGG + chr3_4:27076166-27076185 Msa0496380:intron 35.0%
AGCTCGAACTCTAAACTTTA+AGG + chr3_4:27076224-27076243 Msa0496380:intron 35.0%
GCTCGAACTCTAAACTTTAA+GGG + chr3_4:27076225-27076244 Msa0496380:intron 35.0%
GATGGAATTTCATGTGAAAC+AGG + chr3_4:27076319-27076338 Msa0496380:intron 35.0%
GAAATGCATGATTAGAGAGA+GGG - chr3_4:27076438-27076457 None:intergenic 35.0%
AGAAATGCATGATTAGAGAG+AGG - chr3_4:27076439-27076458 None:intergenic 35.0%
! CCTCAAGAAGCGTGAATTAT+GGG - chr3_4:27070817-27070836 None:intergenic 40.0%
! TCCTCAAGAAGCGTGAATTA+TGG - chr3_4:27070818-27070837 None:intergenic 40.0%
CATTTCTCTTTCAAAGGTCC+TGG + chr3_4:27071529-27071548 Msa0496380:intron 40.0%
AACTTCTTGCATTGCTCCAT+AGG - chr3_4:27071569-27071588 None:intergenic 40.0%
TATGGAGCAATGCAAGAAGT+TGG + chr3_4:27071568-27071587 Msa0496380:CDS 40.0%
! TTTTCCCATTACTCTTCACG+CGG - chr3_4:27071600-27071619 None:intergenic 40.0%
ATTGCTGGAGAAAGTTATGC+TGG + chr3_4:27072484-27072503 Msa0496380:CDS 40.0%
TGTTTCATCCATATGAGTGG+TGG - chr3_4:27073160-27073179 None:intergenic 40.0%
GTCTCTATATGGTCCATAAG+TGG + chr3_4:27073361-27073380 Msa0496380:intron 40.0%
ACTAACTATGGTCCCACTTA+TGG - chr3_4:27073377-27073396 None:intergenic 40.0%
AAGTGGGACCATAGTTAGTA+TGG + chr3_4:27073378-27073397 Msa0496380:intron 40.0%
AATGACGACACAGATGAACA+AGG + chr3_4:27073998-27074017 Msa0496380:CDS 40.0%
ACTGCACTCAGTAGTTTGAT+TGG - chr3_4:27074110-27074129 None:intergenic 40.0%
AATCTTACCGAGACCTTCTT+CGG - chr3_4:27074226-27074245 None:intergenic 40.0%
AAAAAACACTCGACGCATTC+AGG - chr3_4:27074387-27074406 None:intergenic 40.0%
TTGGTCTAGGAAACTTTGAC+CGG + chr3_4:27074409-27074428 Msa0496380:intron 40.0%
TGTACATAATCGTCACTGCA+TGG - chr3_4:27074762-27074781 None:intergenic 40.0%
GTACAAGCATATTTCAACCG+GGG + chr3_4:27074777-27074796 Msa0496380:CDS 40.0%
! GTTTGGAATGATAGTACTGC+AGG - chr3_4:27074859-27074878 None:intergenic 40.0%
GCAGTACTATCATTCCAAAC+TGG + chr3_4:27074859-27074878 Msa0496380:CDS 40.0%
GTACTATCATTCCAAACTGG+GGG + chr3_4:27074862-27074881 Msa0496380:CDS 40.0%
TACTATCATTCCAAACTGGG+GGG + chr3_4:27074863-27074882 Msa0496380:CDS 40.0%
!! GATTAAGGGTGTGGGTTTTT+AGG + chr3_4:27074934-27074953 Msa0496380:CDS 40.0%
ATCAATTGAGCTAAGCTCAG+GGG - chr3_4:27075156-27075175 None:intergenic 40.0%
CTATCAATTGAGCTAAGCTC+AGG - chr3_4:27075158-27075177 None:intergenic 40.0%
CTGAGCTTAGCTCAATTGAT+AGG + chr3_4:27075156-27075175 Msa0496380:intron 40.0%
AGCTCAATTGATAGGGACAT+TGG + chr3_4:27075164-27075183 Msa0496380:intron 40.0%
TGGATAATATATGCAGGGAC+CGG + chr3_4:27075184-27075203 Msa0496380:intron 40.0%
ACAGTGGTGATATAGATGGA+AGG + chr3_4:27075644-27075663 Msa0496380:intron 40.0%
CAGTGGTGATATAGATGGAA+GGG + chr3_4:27075645-27075664 Msa0496380:intron 40.0%
GGATACCAAGTTGTCTCAAT+GGG - chr3_4:27075715-27075734 None:intergenic 40.0%
AGGATACCAAGTTGTCTCAA+TGG - chr3_4:27075716-27075735 None:intergenic 40.0%
TTGAGACAACTTGGTATCCT+TGG + chr3_4:27075716-27075735 Msa0496380:CDS 40.0%
AGTAACAATTCGAACTGTCG+TGG - chr3_4:27075918-27075937 None:intergenic 40.0%
ATGACTTACCACCTTTAGTG+GGG + chr3_4:27076167-27076186 Msa0496380:intron 40.0%
GAAAGGAAAAACCCCACTAA+AGG - chr3_4:27076181-27076200 None:intergenic 40.0%
TTTCATGTGAAACAGGTTGC+TGG + chr3_4:27076326-27076345 Msa0496380:intron 40.0%
TGGCTATGCTGAAGTATACA+AGG + chr3_4:27076346-27076365 Msa0496380:CDS 40.0%
GGCTATGCTGAAGTATACAA+GGG + chr3_4:27076347-27076366 Msa0496380:CDS 40.0%
TATGCTGAAGTATACAAGGG+AGG + chr3_4:27076350-27076369 Msa0496380:CDS 40.0%
GTGCTTCACTCATAACCTTG+TGG - chr3_4:27070764-27070783 None:intergenic 45.0%
CCCATAATTCACGCTTCTTG+AGG + chr3_4:27070814-27070833 Msa0496380:CDS 45.0%
TTGTATACAACATGCACGCC+GGG - chr3_4:27070844-27070863 None:intergenic 45.0%
CTTGTATACAACATGCACGC+CGG - chr3_4:27070845-27070864 None:intergenic 45.0%
! CATACACATGACTTGGGTTG+AGG - chr3_4:27071053-27071072 None:intergenic 45.0%
TACCAACTGAGCTATGCTCA+CGG - chr3_4:27071974-27071993 None:intergenic 45.0%
GCATTATTATATGCAGGGGC+CGG + chr3_4:27072001-27072020 Msa0496380:intron 45.0%
CATTATTATATGCAGGGGCC+GGG + chr3_4:27072002-27072021 Msa0496380:intron 45.0%
ATTATTATATGCAGGGGCCG+GGG + chr3_4:27072003-27072022 Msa0496380:intron 45.0%
!! TTTTTGGTCAGGTAGCCTAG+TGG - chr3_4:27072077-27072096 None:intergenic 45.0%
TATGAATATCCTACCCCAGC+TGG - chr3_4:27072346-27072365 None:intergenic 45.0%
TGCTGTTCTTCTATCCCCAT+TGG - chr3_4:27072395-27072414 None:intergenic 45.0%
AGGTTGTGATTAGTGCAGAC+TGG - chr3_4:27074193-27074212 None:intergenic 45.0%
ATACTCGAGCTTCGTGACAT+TGG - chr3_4:27074826-27074845 None:intergenic 45.0%
GGATAATATATGCAGGGACC+GGG + chr3_4:27075185-27075204 Msa0496380:intron 45.0%
GATAATATATGCAGGGACCG+GGG + chr3_4:27075186-27075205 Msa0496380:intron 45.0%
GTCAAAAGTAGCATAGTGGC+TGG - chr3_4:27075259-27075278 None:intergenic 45.0%
AGCTTCCCATTGAGACAACT+TGG + chr3_4:27075707-27075726 Msa0496380:CDS 45.0%
! TCCTTGGTTCTTTAAGGGAG+AGG + chr3_4:27075732-27075751 Msa0496380:CDS 45.0%
ACCTCTCCCTTAAAGAACCA+AGG - chr3_4:27075736-27075755 None:intergenic 45.0%
AGGAAAAACCCCACTAAAGG+TGG - chr3_4:27076178-27076197 None:intergenic 45.0%
TGTCTGAGTGAAACTGGACT+CGG - chr3_4:27076253-27076272 None:intergenic 45.0%
!!! TTTTTTTTCTTATTTAATTT+TGG + chr3_4:27072230-27072249 Msa0496380:intron 5.0%
!!! TTGATTTATTATTTTTTAAT+TGG + chr3_4:27073213-27073232 Msa0496380:intron 5.0%
!!! TGATTTATTATTTTTTAATT+GGG + chr3_4:27073214-27073233 Msa0496380:intron 5.0%
!!! AAAATTAATTTTAGTTATAA+TGG + chr3_4:27073670-27073689 Msa0496380:intron 5.0%
!! TTTATATAATATAATACTTA+TGG - chr3_4:27075827-27075846 None:intergenic 5.0%
CACGCTTCTTGAGGATTTCC+CGG + chr3_4:27070823-27070842 Msa0496380:CDS 50.0%
TAGGCAAGAGATGAGCATCC+AGG - chr3_4:27071550-27071569 None:intergenic 50.0%
GGATGCTCATCTCTTGCCTA+TGG + chr3_4:27071550-27071569 Msa0496380:CDS 50.0%
CCATTACTCTTCACGCGGAA+GGG - chr3_4:27071595-27071614 None:intergenic 50.0%
CCTTCCGCGTGAAGAGTAAT+GGG + chr3_4:27071593-27071612 Msa0496380:CDS 50.0%
ACCAACTGAGCTATGCTCAC+GGG - chr3_4:27071973-27071992 None:intergenic 50.0%
GTGAGCATAGCTCAGTTGGT+AGG + chr3_4:27071973-27071992 Msa0496380:intron 50.0%
! GTGAATAAGTGGGGTGTCCA+GGG - chr3_4:27072035-27072054 None:intergenic 50.0%
TTGTTCCTTGAGTCACCAGC+TGG + chr3_4:27072328-27072347 Msa0496380:CDS 50.0%
TGTTCCTTGAGTCACCAGCT+GGG + chr3_4:27072329-27072348 Msa0496380:CDS 50.0%
!! TATGAGTGGTGGACCAATCC+TGG - chr3_4:27073149-27073168 None:intergenic 50.0%
!! GGATTGGTCCACCACTCATA+TGG + chr3_4:27073149-27073168 Msa0496380:intron 50.0%
TAACCGTCCGAAGAAGGTCT+CGG + chr3_4:27074216-27074235 Msa0496380:CDS 50.0%
TTACCGAGACCTTCTTCGGA+CGG - chr3_4:27074222-27074241 None:intergenic 50.0%
AAGCAATTAGGGTCGGTCCA+AGG + chr3_4:27074287-27074306 Msa0496380:intron 50.0%
AGCAATTAGGGTCGGTCCAA+GGG + chr3_4:27074288-27074307 Msa0496380:intron 50.0%
TTTCAACCGGGGTGATGTTC+AGG + chr3_4:27074788-27074807 Msa0496380:CDS 50.0%
CTTCGTGACATTGGCATGGA+GGG - chr3_4:27074817-27074836 None:intergenic 50.0%
TCACGAAGCTCGAGTATGAC+TGG + chr3_4:27074829-27074848 Msa0496380:CDS 50.0%
CACGAAGCTCGAGTATGACT+GGG + chr3_4:27074830-27074849 Msa0496380:CDS 50.0%
TTTGCCACAGTGAGAGAAGC+AGG + chr3_4:27076380-27076399 Msa0496380:CDS 50.0%
ATGTCCTGCTTCTCTCACTG+TGG - chr3_4:27076387-27076406 None:intergenic 50.0%
ATTAGAGAGAGGGCTCTTGC+TGG - chr3_4:27076428-27076447 None:intergenic 50.0%
CCCTTCCGCGTGAAGAGTAA+TGG + chr3_4:27071592-27071611 Msa0496380:CDS 55.0%
CCCATTACTCTTCACGCGGA+AGG - chr3_4:27071596-27071615 None:intergenic 55.0%
TCCCGTGAGCATAGCTCAGT+TGG + chr3_4:27071969-27071988 Msa0496380:intron 55.0%
! GGTGAATAAGTGGGGTGTCC+AGG - chr3_4:27072036-27072055 None:intergenic 55.0%
GTTCCTTGAGTCACCAGCTG+GGG + chr3_4:27072330-27072349 Msa0496380:CDS 55.0%
CCTTCTTCGGACGGTTAGTG+AGG - chr3_4:27074213-27074232 None:intergenic 55.0%
CCTCACTAACCGTCCGAAGA+AGG + chr3_4:27074210-27074229 Msa0496380:CDS 55.0%
GTCCAAGGGTCAAGCTAGTG+AGG + chr3_4:27074302-27074321 Msa0496380:intron 55.0%
GCTTCGTGACATTGGCATGG+AGG - chr3_4:27074818-27074837 None:intergenic 55.0%
CGAGCTTCGTGACATTGGCA+TGG - chr3_4:27074821-27074840 None:intergenic 55.0%
GTAGGACTATCCCCCCAGTT+TGG - chr3_4:27074876-27074895 None:intergenic 55.0%
GGTGATCGAGGTTTGAACCC+CGG - chr3_4:27075206-27075225 None:intergenic 55.0%
GTGAAGAAGTGGGGTGATCG+AGG - chr3_4:27075218-27075237 None:intergenic 55.0%
CTACCCCAGCTGGTGACTCA+AGG - chr3_4:27072336-27072355 None:intergenic 60.0%
CTTGAGTCACCAGCTGGGGT+AGG + chr3_4:27072334-27072353 Msa0496380:CDS 60.0%
! CGCCTCACTAGCTTGACCCT+TGG - chr3_4:27074307-27074326 None:intergenic 60.0%
CAACCGGGGTGATGTTCAGG+AGG + chr3_4:27074791-27074810 Msa0496380:CDS 60.0%
! GCTCTTGCTGGCTGGTAGCT+TGG - chr3_4:27076416-27076435 None:intergenic 60.0%
GGTGTCCAGGGTTCGAACCC+CGG - chr3_4:27072023-27072042 None:intergenic 65.0%
GGGCCTCCTGAACATCACCC+CGG - chr3_4:27074797-27074816 None:intergenic 65.0%
GAGAGAGGGCTCTTGCTGGC+TGG - chr3_4:27076424-27076443 None:intergenic 65.0%
AGGGGCCGGGGTTCGAACCC+TGG + chr3_4:27072015-27072034 Msa0496380:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 27070699 27076502 27070699 ID=Msa0496380;Name=Msa0496380
chr3_4 mRNA 27070699 27076502 27070699 ID=Msa0496380-mRNA-1;Parent=Msa0496380;Name=Msa0496380-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|0.85|1|1|7|0|424
chr3_4 exon 27070699 27070855 27070699 ID=Msa0496380-mRNA-1:exon:6431;Parent=Msa0496380-mRNA-1
chr3_4 exon 27071545 27071652 27071545 ID=Msa0496380-mRNA-1:exon:6432;Parent=Msa0496380-mRNA-1
chr3_4 exon 27072317 27072591 27072317 ID=Msa0496380-mRNA-1:exon:6433;Parent=Msa0496380-mRNA-1
chr3_4 exon 27073980 27074237 27073980 ID=Msa0496380-mRNA-1:exon:6434;Parent=Msa0496380-mRNA-1
chr3_4 exon 27074747 27074955 27074747 ID=Msa0496380-mRNA-1:exon:6435;Parent=Msa0496380-mRNA-1
chr3_4 exon 27075648 27075753 27075648 ID=Msa0496380-mRNA-1:exon:6436;Parent=Msa0496380-mRNA-1
chr3_4 exon 27076341 27076502 27076341 ID=Msa0496380-mRNA-1:exon:6437;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27070699 27070855 27070699 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27071545 27071652 27071545 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27072317 27072591 27072317 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27073980 27074237 27073980 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27074747 27074955 27074747 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27075648 27075753 27075648 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
chr3_4 CDS 27076341 27076502 27076341 ID=Msa0496380-mRNA-1:cds;Parent=Msa0496380-mRNA-1
Gene Sequence

>Msa0496380

ATGCAATATAAATTCGCTAAAAACAAAGAGGATGAATATGTGAACAAACTCAATATTTTATACCACAAGGTTATGAGTGAAGCACAGAAATGTGAAGAATGGCCAGTGTTAAAATCCCATAATTCACGCTTCTTGAGGATTTCCCGGCGTGCATGTTGTCCTGGATGCTCATCTCTTGCCTATGGAGCAATGCAAGAAGTTGGACCCTTCCGCGTGAAGAGTAATGGGAAAACCCTTCACAAAAATAACTATTCATGGAACTATGCTGCAAATGTATTGTTCCTTGAGTCACCAGCTGGGGTAGGATATTCATACTCAAATAAATCATCTGATTATGACACCAATGGGGATAGAAGAACAGCAGCAGATAACTATATTTTTTTAGTGAATTGGTTAGAGAGATTTCCTGAATATAAGAATAGAGATTTCTACATTGCTGGAGAAAGTTATGCTGGTCATTATGTCCCTCAACTTGCACACAATATTCTCTACCATAATAAAAAGGCTAATAGGACAATTATCAACCTCAAAGGAATTATGATTGGGAATGCAGTGATCAATGACGACACAGATGAACAAGGAATGTACGATTTTCTTGCAAGTCATGCAATCATATCAGATCAAACAGCATATAATATCAACAAATTTTGTAATTTTTCATCAACTTCCAATCAAACTACTGAGTGCAGTGAAGCAGCAAGTGAAGTTGATAAGAACACATTGTTCCTTGATATATACAACATCTATGCTCCAGTCTGCACTAATCACAACCTCACTAACCGTCCGAAGAAGGTCTCGGATGTTCTTGATCCATGCAGTGACGATTATGTACAAGCATATTTCAACCGGGGTGATGTTCAGGAGGCCCTCCATGCCAATGTCACGAAGCTCGAGTATGACTGGGAAGCCTGCAGTACTATCATTCCAAACTGGGGGGATAGTCCTACAACAATCATTCCCCTTTTACATGATCTCCTAAATAATGGATTAAGGGTGTGGGTTTTTAGTGGTGATATAGATGGAAGGGTGCCTGTTACTGCAACCAAATATTCCCTTAAAAAGATGAAGCTTCCCATTGAGACAACTTGGTATCCTTGGTTCTTTAAGGGAGAGGTTGCTGGCTATGCTGAAGTATACAAGGGAGGTCTAACTTTTGCCACAGTGAGAGAAGCAGGACATCAAGTACCAAGCTACCAGCCAGCAAGAGCCCTCTCTCTAATCATGCATTTCTTAAATGGCACTCCTCTTCCTATTACTCAAAGATTATATGACTAA
Protein sequence

>Msa0496380

MQYKFAKNKEDEYVNKLNILYHKVMSEAQKCEEWPVLKSHNSRFLRISRRACCPGCSSLAYGAMQEVGPFRVKSNGKTLHKNNYSWNYAANVLFLESPAGVGYSYSNKSSDYDTNGDRRTAADNYIFLVNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILYHNKKANRTIINLKGIMIGNAVINDDTDEQGMYDFLASHAIISDQTAYNINKFCNFSSTSNQTTECSEAASEVDKNTLFLDIYNIYAPVCTNHNLTNRPKKVSDVLDPCSDDYVQAYFNRGDVQEALHANVTKLEYDWEACSTIIPNWGDSPTTIIPLLHDLLNNGLRVWVFSGDIDGRVPVTATKYSLKKMKLPIETTWYPWFFKGEVAGYAEVYKGGLTFATVREAGHQVPSYQPARALSLIMHFLNGTPLPITQRLYD*