AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0161230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161230 MtrunA17_Chr1g0174701 92.193 538 10 5 1 537 1 507 0.0 999
Msa0161230 MtrunA17_Chr7g0258321 70.968 465 93 7 73 537 42 464 0.0 654
Msa0161230 MtrunA17_Chr8g0353501 56.325 332 109 6 208 535 166 465 3.01e-123 370
Msa0161230 MtrunA17_Chr7g0256211 54.857 350 120 7 192 536 136 452 3.28e-121 364
Msa0161230 MtrunA17_Chr2g0321431 42.054 516 189 12 65 536 20 469 2.65e-119 360
Msa0161230 MtrunA17_Chr4g0026401 41.093 494 206 10 75 536 21 461 4.43e-109 334
Msa0161230 MtrunA17_Chr5g0422771 49.844 321 128 4 219 536 174 464 1.03e-104 322
Msa0161230 MtrunA17_Chr3g0124601 47.720 329 141 5 208 536 64 361 3.94e-97 299
Msa0161230 MtrunA17_Chr1g0210151 46.884 337 145 5 200 536 38 340 5.11e-95 293
Msa0161230 MtrunA17_Chr5g0424861 44.136 324 150 4 211 533 54 347 6.37e-80 254
Msa0161230 MtrunA17_Chr8g0382861 40.599 367 175 8 170 536 33 356 2.97e-79 252
Msa0161230 MtrunA17_Chr3g0115371 45.016 311 143 3 224 534 65 347 2.46e-78 250
Msa0161230 MtrunA17_Chr3g0093451 48.421 190 84 4 200 384 29 209 1.15e-53 181
Msa0161230 MtrunA17_Chr5g0424851 39.024 246 123 3 289 533 3 222 4.80e-48 172
Msa0161230 MtrunA17_Chr5g0424851 39.207 227 112 2 298 524 226 426 2.15e-46 168
Msa0161230 MtrunA17_Chr1g0196951 28.319 226 113 6 309 529 59 240 3.36e-16 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161230 AT5G06839.3 60.129 464 141 11 91 537 23 459 0.0 530
Msa0161230 AT5G06839.1 57.484 461 117 9 90 537 22 416 3.84e-176 503
Msa0161230 AT5G06839.2 57.359 462 117 10 90 537 22 417 1.57e-174 499
Msa0161230 AT1G08320.1 44.848 495 195 12 68 536 11 453 1.17e-124 374
Msa0161230 AT1G08320.4 44.848 495 195 12 68 536 11 453 1.17e-124 374
Msa0161230 AT1G08320.3 44.848 495 195 12 68 536 11 453 1.17e-124 374
Msa0161230 AT1G08320.2 55.556 342 107 6 195 536 33 329 1.69e-122 364
Msa0161230 AT1G08320.5 55.556 342 107 6 195 536 33 329 1.69e-122 364
Msa0161230 AT5G06950.2 52.096 334 126 5 205 536 29 330 5.97e-112 336
Msa0161230 AT5G06950.4 52.096 334 126 5 205 536 29 330 5.97e-112 336
Msa0161230 AT5G06950.1 52.096 334 126 5 205 536 29 330 5.97e-112 336
Msa0161230 AT5G06950.5 52.096 334 126 5 205 536 29 330 5.97e-112 336
Msa0161230 AT5G06950.3 52.096 334 126 5 205 536 29 330 5.97e-112 336
Msa0161230 AT3G12250.6 51.360 331 129 4 208 536 30 330 2.44e-110 332
Msa0161230 AT3G12250.2 51.360 331 129 4 208 536 30 330 2.44e-110 332
Msa0161230 AT3G12250.7 51.360 331 129 4 208 536 30 330 2.44e-110 332
Msa0161230 AT3G12250.1 51.360 331 129 4 208 536 30 330 2.44e-110 332
Msa0161230 AT3G12250.5 51.360 331 129 4 208 536 3 303 2.67e-110 331
Msa0161230 AT3G12250.3 51.360 331 129 4 208 536 24 324 6.64e-110 330
Msa0161230 AT5G06960.3 55.031 318 109 5 222 536 24 310 6.90e-110 330
Msa0161230 AT5G06960.2 55.031 318 109 5 222 536 44 330 1.03e-109 330
Msa0161230 AT5G06960.1 55.031 318 109 5 222 536 44 330 1.03e-109 330
Msa0161230 AT3G12250.4 51.360 331 129 4 208 536 55 355 5.84e-109 329
Msa0161230 AT1G68640.1 51.829 328 128 4 210 535 152 451 3.17e-106 326
Msa0161230 AT5G10030.5 49.051 316 130 5 221 536 78 362 9.22e-96 296
Msa0161230 AT5G10030.3 49.051 316 130 5 221 536 78 362 9.22e-96 296
Msa0161230 AT5G10030.1 49.051 316 130 5 221 536 78 362 9.22e-96 296
Msa0161230 AT5G10030.4 49.051 316 130 5 221 536 78 362 9.22e-96 296
Msa0161230 AT5G10030.2 49.051 316 130 5 221 536 78 362 9.22e-96 296
Msa0161230 AT5G65210.5 41.353 399 190 7 147 536 3 366 1.04e-92 288
Msa0161230 AT5G65210.7 41.353 399 190 7 147 536 3 366 1.04e-92 288
Msa0161230 AT5G65210.3 41.353 399 190 7 147 536 3 366 1.04e-92 288
Msa0161230 AT5G65210.1 41.353 399 190 7 147 536 3 366 1.04e-92 288
Msa0161230 AT5G65210.2 41.353 399 190 7 147 536 3 366 1.04e-92 288
Msa0161230 AT5G65210.4 41.353 399 190 7 147 536 3 366 1.04e-92 288
Msa0161230 AT1G77920.1 45.892 353 139 6 197 536 53 366 6.39e-92 286
Msa0161230 AT5G65210.6 47.239 326 136 7 211 536 7 296 6.68e-92 283
Msa0161230 AT1G22070.1 48.048 333 145 4 204 536 78 382 1.91e-91 285
Msa0161230 AT1G58330.1 25.397 252 139 6 293 526 3 223 1.05e-12 68.2

Find 104 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCAAGTGCTTATGATTT+AGG 0.170937 1_4:-35997469 Msa0161230:CDS
GAGCATAGAATTGTTATTAT+TGG 0.196059 1_4:+35997910 None:intergenic
CATGACCATCAAATTTCTTT+TGG 0.210584 1_4:-35997767 Msa0161230:CDS
GATGAACACTTGCATGAAAA+TGG 0.212526 1_4:-35995147 Msa0161230:CDS
AATGGGTGGAGGTGCACTTT+TGG 0.270657 1_4:-35995389 Msa0161230:CDS
CTAATGCTATTCATAGAAAT+TGG 0.272106 1_4:+35995349 None:intergenic
ATTTATACCTTTGAATTAGA+TGG 0.288466 1_4:+35996678 None:intergenic
TGCTTATGATTTAGGTGAAT+TGG 0.291461 1_4:-35997461 Msa0161230:CDS
GTACCTACCTTGACAGGTTT+TGG 0.299604 1_4:+35996381 None:intergenic
TTTAAGCAATCCTCCTAATA+TGG 0.308534 1_4:-35993611 Msa0161230:CDS
ACCCACATATACCAAGTATT+TGG 0.313791 1_4:+35993725 None:intergenic
GCAATGTTTGATGTGGAGTA+TGG 0.316893 1_4:-35995222 Msa0161230:CDS
CTCATCACTCACACTATTCT+TGG 0.319137 1_4:+35989740 None:intergenic
CAGACCATCTGAACTCATTA+AGG 0.331549 1_4:-35994977 Msa0161230:intron
CCCATGTAGTTAGCCATATT+AGG 0.347360 1_4:+35993598 None:intergenic
GGCTCACCTTGCACGCCCAT+TGG 0.354028 1_4:+35994731 None:intergenic
GTTATATGTGGAAAATTGTT+TGG 0.359400 1_4:-35995118 Msa0161230:CDS
CTTTGATCTTGAACACTAGA+AGG 0.383567 1_4:+35997394 None:intergenic
GGCTAACTACATGGGACAAA+TGG 0.386586 1_4:-35993590 Msa0161230:CDS
GCTCACCTTGCACGCCCATT+GGG 0.394366 1_4:+35994732 None:intergenic
CACATGAAGCAACGTTCAGC+TGG 0.396922 1_4:+35995012 None:intergenic
GGAGTATGGGAGGTGGTTAG+AGG 0.399529 1_4:-35995208 Msa0161230:CDS
CACCAAATACTTGGTATATG+TGG 0.406944 1_4:-35993727 Msa0161230:CDS
AATAGTGGAGAGCTTGTTCA+TGG 0.409869 1_4:+35993561 None:intergenic
TCATAGAAATTGGAATTCCT+TGG 0.413274 1_4:+35995359 None:intergenic
TACGATTAGCGCCGGCCCAA+TGG 0.415186 1_4:-35994747 Msa0161230:CDS
TCATTCCAAAAGAAATTTGA+TGG 0.416690 1_4:+35997762 None:intergenic
ACGATTAGCGCCGGCCCAAT+GGG 0.424845 1_4:-35994746 Msa0161230:CDS
ATTTAATTAACCTTAGGATC+TGG 0.426639 1_4:+35996185 None:intergenic
TTCGAGCATTGAGTTCTCTC+TGG 0.430265 1_4:-35989777 Msa0161230:CDS
TTTGGTGGTGCAGGTGCAGA+AGG 0.442112 1_4:+35996399 None:intergenic
TCGTCAAGCTGCAAGATGTT+TGG 0.442179 1_4:-35989827 Msa0161230:CDS
TATAATGTACCTACCTTGAC+AGG 0.447542 1_4:+35996375 None:intergenic
GGTTGAGTGCATCAAGCCCT+TGG 0.448691 1_4:+35993665 None:intergenic
GATGTTGATTCTGTTGTTGT+TGG 0.452856 1_4:+35997804 None:intergenic
TTATAGTCTCTGAAAGAGAT+TGG 0.452928 1_4:+35993644 None:intergenic
TCCTAATATGGCTAACTACA+TGG 0.453054 1_4:-35993599 Msa0161230:CDS
CTTACGGAGCACCAAATACT+TGG 0.457443 1_4:-35993736 Msa0161230:CDS
TCTCACAAAACTTTCAATAG+TGG 0.457520 1_4:+35993546 None:intergenic
ACCTTGCACGCCCATTGGGC+CGG 0.467968 1_4:+35994736 None:intergenic
AGTATTTGGTGCTCCGTAAG+AGG 0.471286 1_4:+35993739 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 1_4:-35995003 Msa0161230:CDS
ATGAACACTTGCATGAAAAT+GGG 0.476534 1_4:-35995146 Msa0161230:CDS
AAGTCAAATTGAGCCTCTTA+CGG 0.480461 1_4:-35993752 Msa0161230:CDS
ACTTGCATGAAAATGGGCTT+AGG 0.484405 1_4:-35995140 Msa0161230:CDS
ACAGAGAACTCATCATCATC+AGG 0.490034 1_4:-35996762 Msa0161230:intron
GTTGAGTGCATCAAGCCCTT+GGG 0.490876 1_4:+35993666 None:intergenic
GCCGGCCCAATGGGCGTGCA+AGG 0.500083 1_4:-35994737 Msa0161230:intron
ACACTATTCTTGGCGAGGAC+GGG 0.506076 1_4:+35989750 None:intergenic
GTATTTGGTATAGGTTAGCA+TGG 0.513035 1_4:-35996502 Msa0161230:intron
AAAACCATCTCAACCGTCCA+TGG 0.517927 1_4:-35996448 Msa0161230:CDS
TAATAACAATTCTATGCTCA+TGG 0.520824 1_4:-35997906 Msa0161230:CDS
ATCTCAACCGTCCATGGAGT+TGG 0.523885 1_4:-35996442 Msa0161230:CDS
TTTACCTTAATGAGTTCAGA+TGG 0.525808 1_4:+35994973 None:intergenic
ACCTTTGAATTAGATGGTGG+TGG 0.533763 1_4:+35996684 None:intergenic
AACTCCATGGACGGTTGAGA+TGG 0.534438 1_4:+35996444 None:intergenic
CAGCTGAACGTTGCTTCATG+TGG 0.535836 1_4:-35995011 Msa0161230:CDS
CACACTATTCTTGGCGAGGA+CGG 0.538683 1_4:+35989749 None:intergenic
TGGTTTGCCAACTCCATGGA+CGG 0.539075 1_4:+35996435 None:intergenic
ATCAACACAAGAGGCAGAAG+AGG 0.540377 1_4:-35993695 Msa0161230:CDS
TCGTTGGTTTGCCAACTCCA+TGG 0.541761 1_4:+35996431 None:intergenic
CAAGTAGTTGCTAGGCATAG+AGG 0.542058 1_4:+35997721 None:intergenic
GAACGTTGCTTCATGTGGAT+TGG 0.542533 1_4:-35995006 Msa0161230:CDS
GGTGGTTAGAGGAGCATCAC+AGG 0.543826 1_4:-35995197 Msa0161230:CDS
GATGCAGACGATGAACTGTT+TGG 0.543853 1_4:+35989863 None:intergenic
ACATGAAGCAACGTTCAGCT+GGG 0.545343 1_4:+35995013 None:intergenic
AAATGGGCTTAGGTTATATG+TGG 0.548111 1_4:-35995130 Msa0161230:CDS
TCTATGAATAGCATTAGCTC+AGG 0.548228 1_4:-35995343 Msa0161230:intron
GCTACATGCATTGGTTGAGA+TGG 0.551490 1_4:+35996708 None:intergenic
AAAACTCACAAGTAGTTGCT+AGG 0.556391 1_4:+35997713 None:intergenic
TAGGGCGTGTTAATGGGTGG+AGG 0.559293 1_4:-35995400 Msa0161230:CDS
ACCACCACCATCTAATTCAA+AGG 0.566192 1_4:-35996685 Msa0161230:intron
TATTTGGTATAGGTTAGCAT+GGG 0.566436 1_4:-35996501 Msa0161230:intron
ACCAAATACTTGGTATATGT+GGG 0.567198 1_4:-35993726 Msa0161230:CDS
TTGGTGGTGCAGGTGCAGAA+GGG 0.571374 1_4:+35996400 None:intergenic
GGAGCCACTTGTTATTGGAG+AGG 0.576956 1_4:+35996473 None:intergenic
GGTGGTGGTGCTACATGCAT+TGG 0.577778 1_4:+35996699 None:intergenic
GCAGAAGAGGCACTTTCCCA+AGG 0.580930 1_4:-35993682 Msa0161230:CDS
GGGAAAATGTTAAGAGTTGG+TGG 0.582239 1_4:+35996729 None:intergenic
CAATGTTTGATGTGGAGTAT+GGG 0.584437 1_4:-35995221 Msa0161230:CDS
AGAGGCTGCAATGTTTGATG+TGG 0.585256 1_4:-35995229 Msa0161230:CDS
ATGTAGTTAGCCATATTAGG+AGG 0.586012 1_4:+35993601 None:intergenic
TATACCTTTGAATTAGATGG+TGG 0.586657 1_4:+35996681 None:intergenic
ATAGAGGATGAAGATGAAGA+TGG 0.597582 1_4:+35997737 None:intergenic
CCTAATATGGCTAACTACAT+GGG 0.597846 1_4:-35993598 Msa0161230:CDS
CAGAAGAGGCACTTTCCCAA+GGG 0.599073 1_4:-35993681 Msa0161230:CDS
CTACATGCATTGGTTGAGAT+GGG 0.602831 1_4:+35996709 None:intergenic
GATGGGAAAATGTTAAGAGT+TGG 0.603515 1_4:+35996726 None:intergenic
TGCACCACCAAAACCTGTCA+AGG 0.616194 1_4:-35996388 Msa0161230:intron
TTCAGCAGCTAGAAACAAGT+AGG 0.617268 1_4:-35995880 Msa0161230:CDS
CATGAAGCAACGTTCAGCTG+GGG 0.618932 1_4:+35995014 None:intergenic
CACTCACACTATTCTTGGCG+AGG 0.619291 1_4:+35989745 None:intergenic
TTGATGTGGAGTATGGGAGG+TGG 0.624452 1_4:-35995215 Msa0161230:CDS
TGGGCCGGCGCTAATCGTAA+CGG 0.630480 1_4:+35994751 None:intergenic
CACTGCAGGCAGATAATCTG+AGG 0.637739 1_4:-35989888 Msa0161230:intron
ACTTCAAGTTCTGAACATGA+AGG 0.639217 1_4:-35996218 Msa0161230:CDS
GATGCCGTTACGATTAGCGC+CGG 0.643647 1_4:-35994755 Msa0161230:CDS
TTAACCTCTCCAATAACAAG+TGG 0.650451 1_4:-35996477 Msa0161230:CDS
GCAGAAAGAGAACAATCGCA+AGG 0.652495 1_4:-35996246 Msa0161230:intron
TGTTTGATGTGGAGTATGGG+AGG 0.654392 1_4:-35995218 Msa0161230:CDS
AAGACTTGCTCAGAATAGAG+AGG 0.666657 1_4:-35996087 Msa0161230:CDS
GTTGCAACAATCAACACAAG+AGG 0.670460 1_4:-35993704 Msa0161230:CDS
AAAATGTTAAGAGTTGGTGG+TGG 0.691086 1_4:+35996732 None:intergenic
TGATGGTCATGCATATGATG+AGG 0.700141 1_4:+35997779 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAAAAAAATAAATAAA+TGG + chr1_4:35991418-35991437 None:intergenic 0.0%
!!! ATTATTTGATAATTTGTATT+TGG - chr1_4:35991213-35991232 Msa0161230:intron 10.0%
!! TAATTAATTTAATTAACCTT+AGG + chr1_4:35991554-35991573 None:intergenic 10.0%
!!! ATTTTTTATATATTTTAGTG+TGG - chr1_4:35992234-35992253 Msa0161230:intron 10.0%
!!! TTTTTTATATATTTTAGTGT+GGG - chr1_4:35992235-35992254 Msa0161230:intron 10.0%
!!! TTGTAACAATTTTTTTTTTT+TGG - chr1_4:35992467-35992486 Msa0161230:intron 10.0%
!! TTTACTTAAACAAATAAAAA+AGG + chr1_4:35993320-35993339 None:intergenic 10.0%
!! AAAATTACTTAAAATGATAA+GGG + chr1_4:35993863-35993882 None:intergenic 10.0%
!! AAAAATTACTTAAAATGATA+AGG + chr1_4:35993864-35993883 None:intergenic 10.0%
!!! ACATTTATTATATTGTTTTT+TGG - chr1_4:35993907-35993926 Msa0161230:intron 10.0%
!!! ATTAATATTGTTTTATTTGA+TGG - chr1_4:35993934-35993953 Msa0161230:intron 10.0%
!! AAATTAATAAAAATGAAGAT+GGG + chr1_4:35994290-35994309 None:intergenic 10.0%
!! AAAATTAATAAAAATGAAGA+TGG + chr1_4:35994291-35994310 None:intergenic 10.0%
!!! TACAATTTTACAAAATATTA+AGG - chr1_4:35994516-35994535 Msa0161230:intron 10.0%
!! AATACTCTTAAAATATAAAT+GGG + chr1_4:35995010-35995029 None:intergenic 10.0%
!! AAATACTCTTAAAATATAAA+TGG + chr1_4:35995011-35995030 None:intergenic 10.0%
!! AAATGTATTTATACTTTATT+AGG - chr1_4:35995181-35995200 Msa0161230:CDS 10.0%
!! TTATTTAAACAAAAAATTGT+AGG + chr1_4:35995952-35995971 None:intergenic 10.0%
!! AAAAAATGTATAATAAATAG+AGG - chr1_4:35996336-35996355 Msa0161230:intron 10.0%
!!! TTTTGAAAAATACTATAAAA+TGG + chr1_4:35996718-35996737 None:intergenic 10.0%
!! AAAAAAAAAACAATAACATT+TGG - chr1_4:35996739-35996758 Msa0161230:CDS 10.0%
!! AAAAAAAAACAATAACATTT+GGG - chr1_4:35996740-35996759 Msa0161230:CDS 10.0%
!!! TAGTTTTGAAAATTATAAAT+TGG + chr1_4:35997378-35997397 None:intergenic 10.0%
!!! CTTTTTTCAGTATTAATTTT+TGG - chr1_4:35990416-35990435 Msa0161230:intron 15.0%
!!! AAAATAAAAGTACTAGTATA+CGG + chr1_4:35990552-35990571 None:intergenic 15.0%
!!! AAAATATTTTTTTCTTTTGC+AGG + chr1_4:35990629-35990648 None:intergenic 15.0%
!!! TATTTGCTTTTATACATTTT+AGG - chr1_4:35991748-35991767 Msa0161230:intron 15.0%
!!! TTTCATTTTAGAAGTATATT+CGG + chr1_4:35992147-35992166 None:intergenic 15.0%
!!! AATGTTTTGTTTCATTTTTA+GGG - chr1_4:35992312-35992331 Msa0161230:intron 15.0%
!!! ATGATTTGATTTTATTAGTA+TGG + chr1_4:35992420-35992439 None:intergenic 15.0%
!!! TTAAAACCAATATTTCTATA+AGG + chr1_4:35992810-35992829 None:intergenic 15.0%
!!! TTTTATTTAGATATCTGTAA+CGG + chr1_4:35993127-35993146 None:intergenic 15.0%
!!! CTCTAAAAAAATAAATAAGT+TGG + chr1_4:35994888-35994907 None:intergenic 15.0%
!!! CAACTTATTTATTTTTTTAG+AGG - chr1_4:35994886-35994905 Msa0161230:intron 15.0%
!!! AGTTTGTATTATTTTATGTA+AGG + chr1_4:35995068-35995087 None:intergenic 15.0%
!! ACTAAAAAAAGACATAAAAA+TGG - chr1_4:35995085-35995104 Msa0161230:CDS 15.0%
!! TTAATTAACCTTAAATAAGT+TGG + chr1_4:35995118-35995137 None:intergenic 15.0%
!! AAAAATGAAATGTTGTATAA+CGG - chr1_4:35995769-35995788 Msa0161230:intron 15.0%
!!! GGTAGTATTTTTTAATTTAT+TGG + chr1_4:35996155-35996174 None:intergenic 15.0%
!! AATATGTTTGTAATTACTAT+TGG - chr1_4:35996241-35996260 Msa0161230:CDS 15.0%
!! AAAGAAATAATTAATGTAGT+TGG - chr1_4:35996368-35996387 Msa0161230:intron 15.0%
!!! TCCTTTTTTTTTTATTTGAT+GGG + chr1_4:35996870-35996889 None:intergenic 15.0%
!! AAAAATTAATTAAACGAGAA+AGG + chr1_4:35997122-35997141 None:intergenic 15.0%
!!! AAAAAAATGTTTTGAATCAT+AGG + chr1_4:35997189-35997208 None:intergenic 15.0%
!!! TTTTCTTCTTATAATTTTCA+TGG - chr1_4:35997337-35997356 Msa0161230:intron 15.0%
!! TTTCTTTCAATAATTGTAAT+AGG + chr1_4:35997523-35997542 None:intergenic 15.0%
!!! TATTTGTTTTCATAAGAAAC+TGG + chr1_4:35990150-35990169 None:intergenic 20.0%
!! ATTTATACCTTTGAATTAGA+TGG + chr1_4:35991055-35991074 None:intergenic 20.0%
!!! TGATAATTTGTATTTGGTAT+AGG - chr1_4:35991219-35991238 Msa0161230:intron 20.0%
!! AGAGGTTCAAATAAATAAAT+TGG + chr1_4:35991812-35991831 None:intergenic 20.0%
!!! TGAAACAAAACATTGTTTTT+AGG + chr1_4:35992306-35992325 None:intergenic 20.0%
!!! CAATGTTTTGTTTCATTTTT+AGG - chr1_4:35992311-35992330 Msa0161230:intron 20.0%
!!! TAAGTTTGACACATATTTTT+TGG + chr1_4:35992928-35992947 None:intergenic 20.0%
!! AAAAAATATGTGTCAAACTT+AGG - chr1_4:35992927-35992946 Msa0161230:intron 20.0%
!!! AAAGTTTGATACGTATTTTT+GGG + chr1_4:35993073-35993092 None:intergenic 20.0%
!! CTTAAACAAATAAAAAAGGA+TGG + chr1_4:35993316-35993335 None:intergenic 20.0%
!! ATTACCCTTAAATTTACTTT+GGG + chr1_4:35993390-35993409 None:intergenic 20.0%
!! TATTACCCTTAAATTTACTT+TGG + chr1_4:35993391-35993410 None:intergenic 20.0%
!!! CAATAACAAATTTTAGTGAA+AGG + chr1_4:35993499-35993518 None:intergenic 20.0%
!!! CTTTCACTAAAATTTGTTAT+TGG - chr1_4:35993497-35993516 Msa0161230:intron 20.0%
!! TTGTTTATAATAGTGATTAG+AGG - chr1_4:35993789-35993808 Msa0161230:intron 20.0%
!! CATGTGCTTTAATAATATTT+AGG - chr1_4:35993818-35993837 Msa0161230:intron 20.0%
!!! TATAATGTTTTGCATTTTCT+TGG - chr1_4:35994259-35994278 Msa0161230:intron 20.0%
!! TCTTAATATATATGTTTCCA+TGG + chr1_4:35994572-35994591 None:intergenic 20.0%
!! ATCATTTCAAATTGAATTTG+TGG - chr1_4:35994609-35994628 Msa0161230:intron 20.0%
!! AACTAGGTAAAAAATTTCAA+GGG + chr1_4:35994687-35994706 None:intergenic 20.0%
!! TAACTAGGTAAAAAATTTCA+AGG + chr1_4:35994688-35994707 None:intergenic 20.0%
!!! ATACACTTTTATCACAAAAA+AGG - chr1_4:35995223-35995242 Msa0161230:CDS 20.0%
!! ATTTATAACATTGAGTATCA+AGG - chr1_4:35995375-35995394 Msa0161230:CDS 20.0%
!!! TATTTTATGTCTTCAAGTTA+CGG + chr1_4:35995532-35995551 None:intergenic 20.0%
!!! ATTGTTGATAAAAACATCTT+AGG + chr1_4:35995912-35995931 None:intergenic 20.0%
!! ACCCATCAAATAAAAAAAAA+AGG - chr1_4:35996866-35996885 Msa0161230:intron 20.0%
!!! CTCCTTTTTTTTTTATTTGA+TGG + chr1_4:35996871-35996890 None:intergenic 20.0%
!! CTTTCAAATAAATTATCAGT+TGG + chr1_4:35997001-35997020 None:intergenic 20.0%
!! AAAATATAGTGAAAAGATAG+AGG + chr1_4:35997217-35997236 None:intergenic 20.0%
!! AAAAATAAACGGTAAATAGA+TGG + chr1_4:35997277-35997296 None:intergenic 20.0%
!! AGGTCTTCATTAAAAATAAA+CGG + chr1_4:35997288-35997307 None:intergenic 20.0%
!! TAGAATAACAAAGAGTTATA+TGG + chr1_4:35997701-35997720 None:intergenic 20.0%
!! GAGCATAGAATTGTTATTAT+TGG + chr1_4:35989823-35989842 None:intergenic 25.0%
! TAATAACAATTCTATGCTCA+TGG - chr1_4:35989824-35989843 Msa0161230:CDS 25.0%
! TCATTCCAAAAGAAATTTGA+TGG + chr1_4:35989971-35989990 None:intergenic 25.0%
!!! TCAAGCATTTTTTTTGTATC+TGG - chr1_4:35990293-35990312 Msa0161230:intron 25.0%
!!! TTTTAAAGATTCTCTGTCTA+AGG - chr1_4:35990490-35990509 Msa0161230:intron 25.0%
! TTTAAAGATTCTCTGTCTAA+GGG - chr1_4:35990491-35990510 Msa0161230:intron 25.0%
! ATTTAGTTGAAGAAGACAAA+GGG + chr1_4:35990835-35990854 None:intergenic 25.0%
! TATTTAGTTGAAGAAGACAA+AGG + chr1_4:35990836-35990855 None:intergenic 25.0%
! ATTATGGGAAATGTAAAACT+TGG + chr1_4:35990871-35990890 None:intergenic 25.0%
!! CCAAGTCTTATCTTAATTAT+GGG + chr1_4:35990886-35990905 None:intergenic 25.0%
!! ACCAAGTCTTATCTTAATTA+TGG + chr1_4:35990887-35990906 None:intergenic 25.0%
! TGGTAAGATATTATTGATGA+TGG - chr1_4:35990903-35990922 Msa0161230:intron 25.0%
! ATTTAATTAACCTTAGGATC+TGG + chr1_4:35991548-35991567 None:intergenic 25.0%
! AAAAAACAATCATCCTGTAA+GGG + chr1_4:35991710-35991729 None:intergenic 25.0%
! AAAAAAACAATCATCCTGTA+AGG + chr1_4:35991711-35991730 None:intergenic 25.0%
!! AAGCAAATACTACAGTTTTT+GGG + chr1_4:35991737-35991756 None:intergenic 25.0%
!! AAAGCAAATACTACAGTTTT+TGG + chr1_4:35991738-35991757 None:intergenic 25.0%
! CTAATGCTATTCATAGAAAT+TGG + chr1_4:35992384-35992403 None:intergenic 25.0%
!!! TTTTTGGAACAAATTTTCAG+AGG - chr1_4:35992483-35992502 Msa0161230:intron 25.0%
! GTTATATGTGGAAAATTGTT+TGG - chr1_4:35992612-35992631 Msa0161230:intron 25.0%
! TGGAAATGTTTCAAGAAATA+TGG + chr1_4:35992908-35992927 None:intergenic 25.0%
!! CAAAGTTTGATACGTATTTT+TGG + chr1_4:35993074-35993093 None:intergenic 25.0%
! CAAAAATACGTATCAAACTT+TGG - chr1_4:35993072-35993091 Msa0161230:intron 25.0%
!!! TTGTCACAAAATTTTAGTGT+GGG + chr1_4:35993202-35993221 None:intergenic 25.0%
!!! TTTGTCACAAAATTTTAGTG+TGG + chr1_4:35993203-35993222 None:intergenic 25.0%
! TGATAAATCACCAAAACAAA+AGG - chr1_4:35993227-35993246 Msa0161230:intron 25.0%
! GATAAATCACCAAAACAAAA+GGG - chr1_4:35993228-35993247 Msa0161230:intron 25.0%
! AATTTGACTAAAACTGTAGT+TGG - chr1_4:35993360-35993379 Msa0161230:intron 25.0%
! AGTTCCCAAAGTAAATTTAA+GGG - chr1_4:35993383-35993402 Msa0161230:intron 25.0%
! ATGAATGAATGTGGAATTAA+AGG - chr1_4:35993422-35993441 Msa0161230:intron 25.0%
!!! AAGTTTTTCAGTATAGAGTT+AGG - chr1_4:35993452-35993471 Msa0161230:intron 25.0%
!!! ACAAATTTTAGTGAAAGGTA+TGG + chr1_4:35993494-35993513 None:intergenic 25.0%
! TGTTATTGGAATCAGAAAAA+TGG - chr1_4:35993511-35993530 Msa0161230:intron 25.0%
! ATTATAATAGTGACCGAATA+GGG + chr1_4:35993671-35993690 None:intergenic 25.0%
! AATTATAATAGTGACCGAAT+AGG + chr1_4:35993672-35993691 None:intergenic 25.0%
! TTAGGCGTGTAAAAAAAAAA+TGG - chr1_4:35993836-35993855 Msa0161230:intron 25.0%
! GCAAAACATTATAAGTTGTT+GGG + chr1_4:35994252-35994271 None:intergenic 25.0%
! TGCAAAACATTATAAGTTGT+TGG + chr1_4:35994253-35994272 None:intergenic 25.0%
! TCCTTACTTAATTACTAAGT+TGG - chr1_4:35994472-35994491 Msa0161230:intron 25.0%
! CCTTACTTAATTACTAAGTT+GGG - chr1_4:35994473-35994492 Msa0161230:intron 25.0%
! ACTAGGTAAAAAATTTCAAG+GGG + chr1_4:35994686-35994705 None:intergenic 25.0%
! AGTAGTAGTTTATAATGTGA+GGG + chr1_4:35994797-35994816 None:intergenic 25.0%
! AAGTAGTAGTTTATAATGTG+AGG + chr1_4:35994798-35994817 None:intergenic 25.0%
!!! CTCTCATTTTGATATTAGAA+AGG - chr1_4:35994922-35994941 Msa0161230:intron 25.0%
! GAGAAATACCAACTTATTTA+AGG - chr1_4:35995107-35995126 Msa0161230:CDS 25.0%
! TACAAATCTAGACTTACATT+TGG + chr1_4:35995146-35995165 None:intergenic 25.0%
! TACTAGAAAAAGATTAGCAA+AGG - chr1_4:35995266-35995285 Msa0161230:intron 25.0%
! AACCATGAAAGATATCTTAA+AGG + chr1_4:35995310-35995329 None:intergenic 25.0%
! TGGATGAAGATTATATCAAT+GGG + chr1_4:35995463-35995482 None:intergenic 25.0%
! TTGGATGAAGATTATATCAA+TGG + chr1_4:35995464-35995483 None:intergenic 25.0%
! GAAGAAATTCCAATATTGTT+TGG - chr1_4:35995843-35995862 Msa0161230:CDS 25.0%
! TCAAAAAGGTCCTATAATTA+GGG + chr1_4:35996183-35996202 None:intergenic 25.0%
! TTCAAAAAGGTCCTATAATT+AGG + chr1_4:35996184-35996203 None:intergenic 25.0%
!!! GGACCTTTTTGAAAAAATAA+CGG - chr1_4:35996191-35996210 Msa0161230:intron 25.0%
!!! GACCTTTTTGAAAAAATAAC+GGG - chr1_4:35996192-35996211 Msa0161230:intron 25.0%
!!! TTCCCGTTATTTTTTCAAAA+AGG + chr1_4:35996197-35996216 None:intergenic 25.0%
!!! AATTTTATCCTTTAAGAGAG+AGG - chr1_4:35996270-35996289 Msa0161230:intron 25.0%
!!! ATTTTATCCTTTAAGAGAGA+GGG - chr1_4:35996271-35996290 Msa0161230:intron 25.0%
!! AGCAAATGAGTCTTATAAAA+AGG - chr1_4:35996395-35996414 Msa0161230:CDS 25.0%
!! GCAAATGAGTCTTATAAAAA+GGG - chr1_4:35996396-35996415 Msa0161230:CDS 25.0%
! GGACAAAAAAATTCTCAAAA+GGG - chr1_4:35996417-35996436 Msa0161230:CDS 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG - chr1_4:35996431-35996450 Msa0161230:CDS 25.0%
! TTCATTGGACTGATATATAT+GGG + chr1_4:35996523-35996542 None:intergenic 25.0%
! ATTCATTGGACTGATATATA+TGG + chr1_4:35996524-35996543 None:intergenic 25.0%
! ATATATATCAGTCCAATGAA+TGG - chr1_4:35996523-35996542 Msa0161230:intron 25.0%
! TATATATCAGTCCAATGAAT+GGG - chr1_4:35996524-35996543 Msa0161230:intron 25.0%
! GCATATAAACAATATGAGTA+AGG - chr1_4:35996685-35996704 Msa0161230:intron 25.0%
!! TTTTGGATATCTAAACAACT+TGG + chr1_4:35996930-35996949 None:intergenic 25.0%
!! CAAAGTTCACAAAGAAATTT+TGG + chr1_4:35996947-35996966 None:intergenic 25.0%
! CAAACAAGAATAAGAAACTT+AGG - chr1_4:35997037-35997056 Msa0161230:intron 25.0%
! TAAGAAACTTAGGAATCATT+AGG - chr1_4:35997047-35997066 Msa0161230:intron 25.0%
! AAAACTGGTCAAATTGAAAA+GGG + chr1_4:35997153-35997172 None:intergenic 25.0%
! AAAAACTGGTCAAATTGAAA+AGG + chr1_4:35997154-35997173 None:intergenic 25.0%
!!! ATTTGACCAGTTTTTAGTTT+TGG - chr1_4:35997159-35997178 Msa0161230:intron 25.0%
! TACTAGCATATTGAAAAAGT+TGG + chr1_4:35997313-35997332 None:intergenic 25.0%
!! AGTCAGTTGATTTAAATTAC+TGG - chr1_4:35997451-35997470 Msa0161230:CDS 25.0%
CTAAAAAACTTGCATCTACT+TGG + chr1_4:35989797-35989816 None:intergenic 30.0%
!!! CAAGTAGATGCAAGTTTTTT+AGG - chr1_4:35989795-35989814 Msa0161230:CDS 30.0%
! TTGAGATTCATGTGAGTTTT+TGG + chr1_4:35989853-35989872 None:intergenic 30.0%
! GATGATGAAGAAGATTTTGA+TGG + chr1_4:35989905-35989924 None:intergenic 30.0%
! CATGACCATCAAATTTCTTT+TGG - chr1_4:35989963-35989982 Msa0161230:intron 30.0%
GATTCAAGTGCTTATGATTT+AGG - chr1_4:35990261-35990280 Msa0161230:intron 30.0%
TGCTTATGATTTAGGTGAAT+TGG - chr1_4:35990269-35990288 Msa0161230:intron 30.0%
!!! GCATTTTTTTTGTATCTGGA+TGG - chr1_4:35990297-35990316 Msa0161230:intron 30.0%
TTTGGTCAAATTCAGTAAGA+TGG - chr1_4:35990434-35990453 Msa0161230:intron 30.0%
TTGGTCAAATTCAGTAAGAT+GGG - chr1_4:35990435-35990454 Msa0161230:intron 30.0%
TCATGACATATAACAAACCT+TGG - chr1_4:35990718-35990737 Msa0161230:intron 30.0%
CCCATAATTAAGATAAGACT+TGG - chr1_4:35990883-35990902 Msa0161230:intron 30.0%
TATACCTTTGAATTAGATGG+TGG + chr1_4:35991052-35991071 None:intergenic 30.0%
ATTATGAGATTGTCAACTCA+AGG + chr1_4:35991138-35991157 None:intergenic 30.0%
TATTTGGTATAGGTTAGCAT+GGG - chr1_4:35991229-35991248 Msa0161230:intron 30.0%
!!! TTGTTTTTAGGTCCTATTGT+TGG + chr1_4:35992294-35992313 None:intergenic 30.0%
TCATAGAAATTGGAATTCCT+TGG + chr1_4:35992374-35992393 None:intergenic 30.0%
ATGAACACTTGCATGAAAAT+GGG - chr1_4:35992584-35992603 Msa0161230:intron 30.0%
!! TTCTAGCTAGAACATTTTTG+AGG + chr1_4:35992660-35992679 None:intergenic 30.0%
TTTACCTTAATGAGTTCAGA+TGG + chr1_4:35992760-35992779 None:intergenic 30.0%
!! ACCTAGCCTTATAGAAATAT+TGG - chr1_4:35992801-35992820 Msa0161230:intron 30.0%
! ACCAATATTTCTATAAGGCT+AGG + chr1_4:35992805-35992824 None:intergenic 30.0%
GGAATATGTGATCAAAATTG+CGG - chr1_4:35993093-35993112 Msa0161230:intron 30.0%
! TGTGCAATCTAAAATGATGA+TGG - chr1_4:35993155-35993174 Msa0161230:intron 30.0%
!! TATAGATCACCCTTTTGTTT+TGG + chr1_4:35993240-35993259 None:intergenic 30.0%
GAGTTCCCAAAGTAAATTTA+AGG - chr1_4:35993382-35993401 Msa0161230:intron 30.0%
TTTGATGTCATGAATGAATG+TGG - chr1_4:35993413-35993432 Msa0161230:intron 30.0%
!! ATCAGAAAAATGGACTAAGA+TGG - chr1_4:35993521-35993540 Msa0161230:intron 30.0%
AGATGGAAATAGAAGAAAAG+TGG - chr1_4:35993538-35993557 Msa0161230:intron 30.0%
!!! ACTTGTTTTACACGAGTTTA+TGG + chr1_4:35993630-35993649 None:intergenic 30.0%
ACCAAATACTTGGTATATGT+GGG - chr1_4:35994004-35994023 Msa0161230:intron 30.0%
! TTATAGTCTCTGAAAGAGAT+TGG + chr1_4:35994089-35994108 None:intergenic 30.0%
TTTAAGCAATCCTCCTAATA+TGG - chr1_4:35994119-35994138 Msa0161230:intron 30.0%
TCTCACAAAACTTTCAATAG+TGG + chr1_4:35994187-35994206 None:intergenic 30.0%
!! TATTGAAAGTTTTGTGAGAC+AGG - chr1_4:35994188-35994207 Msa0161230:intron 30.0%
CCCAACTTAGTAATTAAGTA+AGG + chr1_4:35994476-35994495 None:intergenic 30.0%
CATGGTATAAATTGCAGTTA+CGG + chr1_4:35994554-35994573 None:intergenic 30.0%
TTGTGAATATTGTGTGATCT+TGG - chr1_4:35994642-35994661 Msa0161230:intron 30.0%
!!! ATCTTGGTTAACTAGTTTTG+TGG - chr1_4:35994658-35994677 Msa0161230:intron 30.0%
CTAGGTAAAAAATTTCAAGG+GGG + chr1_4:35994685-35994704 None:intergenic 30.0%
GTTATGGACTTATAGTAACT+AGG + chr1_4:35994703-35994722 None:intergenic 30.0%
ATCTGTTCCTTCAATCATAT+GGG - chr1_4:35994753-35994772 Msa0161230:CDS 30.0%
AAATCTAGACTTACATTTGG+TGG + chr1_4:35995143-35995162 None:intergenic 30.0%
GAAAAAGATTAGCAAAGGTA+AGG - chr1_4:35995271-35995290 Msa0161230:intron 30.0%
GGGTTTCAAAAATGTATCTT+TGG + chr1_4:35995483-35995502 None:intergenic 30.0%
AGCTAAAAAGCAACAAGTTA+TGG + chr1_4:35995564-35995583 None:intergenic 30.0%
!!! TTGGGTTGGCTTATTTATTT+TGG - chr1_4:35995605-35995624 Msa0161230:intron 30.0%
TTACAAACAAAGACAAGTGA+AGG - chr1_4:35995711-35995730 Msa0161230:intron 30.0%
ATCTTAGGCAAATATGTGTT+TGG + chr1_4:35995897-35995916 None:intergenic 30.0%
!! ATGTTGAAAAGTACCATAAG+AGG - chr1_4:35996124-35996143 Msa0161230:intron 30.0%
TTTATTGGAAACACCTCTTA+TGG + chr1_4:35996140-35996159 None:intergenic 30.0%
! AATAACGGGAATTAAGATAG+TGG - chr1_4:35996206-35996225 Msa0161230:CDS 30.0%
GGGACAAAAAAATTCTCAAA+AGG - chr1_4:35996416-35996435 Msa0161230:CDS 30.0%
! CTCAAAAGGGTCTTATAATT+AGG - chr1_4:35996430-35996449 Msa0161230:CDS 30.0%
GGTATACCAAAACTAAAAAC+TGG + chr1_4:35997168-35997187 None:intergenic 30.0%
AATTCAAACTCAAACTAGAG+AGG + chr1_4:35997765-35997784 None:intergenic 30.0%
! TTAATTTGAAAACTCACTGC+AGG - chr1_4:35997828-35997847 Msa0161230:CDS 30.0%
!! GATGTTGATTCTGTTGTTGT+TGG + chr1_4:35989929-35989948 None:intergenic 35.0%
ATAGAGGATGAAGATGAAGA+TGG + chr1_4:35989996-35990015 None:intergenic 35.0%
AAAACTCACAAGTAGTTGCT+AGG + chr1_4:35990020-35990039 None:intergenic 35.0%
TTCATAAGAAACTGGCATGT+TGG + chr1_4:35990142-35990161 None:intergenic 35.0%
CTTTGATCTTGAACACTAGA+AGG + chr1_4:35990339-35990358 None:intergenic 35.0%
GTCATGATCTCCTTAGAAAA+AGG - chr1_4:35990742-35990761 Msa0161230:intron 35.0%
ATGATCTCCTTAGAAAAAGG+TGG - chr1_4:35990745-35990764 Msa0161230:intron 35.0%
! GCATATACCACCTTTTTCTA+AGG + chr1_4:35990755-35990774 None:intergenic 35.0%
!! AAAATGTTAAGAGTTGGTGG+TGG + chr1_4:35991001-35991020 None:intergenic 35.0%
GATGGGAAAATGTTAAGAGT+TGG + chr1_4:35991007-35991026 None:intergenic 35.0%
GTATTTGGTATAGGTTAGCA+TGG - chr1_4:35991228-35991247 Msa0161230:intron 35.0%
TTAACCTCTCCAATAACAAG+TGG - chr1_4:35991253-35991272 Msa0161230:intron 35.0%
!!! TTTTTGGAGCCACTTGTTAT+TGG + chr1_4:35991265-35991284 None:intergenic 35.0%
TATAATGTACCTACCTTGAC+AGG + chr1_4:35991358-35991377 None:intergenic 35.0%
!! ACTTCAAGTTCTGAACATGA+AGG - chr1_4:35991512-35991531 Msa0161230:intron 35.0%
AAAAAGCAGGCTTAGGAAAA+AGG - chr1_4:35991673-35991692 Msa0161230:intron 35.0%
! TTTGAACCTCTCTTTTTCTC+AGG - chr1_4:35991821-35991840 Msa0161230:intron 35.0%
TCGTGTTAAAAATTCACGAC+TGG - chr1_4:35992036-35992055 Msa0161230:intron 35.0%
ATCCATCTTGATCCAACAAT+AGG - chr1_4:35992279-35992298 Msa0161230:intron 35.0%
!!! TCATTTTTAGGGCGTGTTAA+TGG - chr1_4:35992323-35992342 Msa0161230:intron 35.0%
!!! CATTTTTAGGGCGTGTTAAT+GGG - chr1_4:35992324-35992343 Msa0161230:intron 35.0%
TCTATGAATAGCATTAGCTC+AGG - chr1_4:35992387-35992406 Msa0161230:intron 35.0%
CAATGTTTGATGTGGAGTAT+GGG - chr1_4:35992509-35992528 Msa0161230:intron 35.0%
GATGAACACTTGCATGAAAA+TGG - chr1_4:35992583-35992602 Msa0161230:intron 35.0%
! AAATGGGCTTAGGTTATATG+TGG - chr1_4:35992600-35992619 Msa0161230:intron 35.0%
!!! GATGTGTTCCATCTTGTTTT+TGG - chr1_4:35992682-35992701 Msa0161230:intron 35.0%
!!! TCCATCTTGTTTTTGGAATG+TGG - chr1_4:35992689-35992708 Msa0161230:intron 35.0%
TCCACATTCCAAAAACAAGA+TGG + chr1_4:35992693-35992712 None:intergenic 35.0%
TTTAAATTGCCGTTACAGTC+AGG - chr1_4:35992825-35992844 Msa0161230:intron 35.0%
TTAAATTGCCGTTACAGTCA+GGG - chr1_4:35992826-35992845 Msa0161230:intron 35.0%
ATATGGACCCCAAAGATTTA+GGG + chr1_4:35992891-35992910 None:intergenic 35.0%
AATATGGACCCCAAAGATTT+AGG + chr1_4:35992892-35992911 None:intergenic 35.0%
GGGAAATGTTTCGAGAAATT+TGG + chr1_4:35993053-35993072 None:intergenic 35.0%
!! AGTGAAAGGTATGGCTTTAT+GGG + chr1_4:35993485-35993504 None:intergenic 35.0%
! TAGTGAAAGGTATGGCTTTA+TGG + chr1_4:35993486-35993505 None:intergenic 35.0%
GAAATAGAAGAAAAGTGGCA+CGG - chr1_4:35993543-35993562 Msa0161230:CDS 35.0%
AAATAGAAGAAAAGTGGCAC+GGG - chr1_4:35993544-35993563 Msa0161230:CDS 35.0%
TCTCTATCTCTCATTGTCTA+TGG - chr1_4:35993567-35993586 Msa0161230:CDS 35.0%
CTCTATCTCTCATTGTCTAT+GGG - chr1_4:35993568-35993587 Msa0161230:CDS 35.0%
ACGAGTTTATGGTCAATTAG+GGG + chr1_4:35993619-35993638 None:intergenic 35.0%
CACGAGTTTATGGTCAATTA+GGG + chr1_4:35993620-35993639 None:intergenic 35.0%
ACACGAGTTTATGGTCAATT+AGG + chr1_4:35993621-35993640 None:intergenic 35.0%
ACTTCTTCTTACACCCTATT+CGG - chr1_4:35993655-35993674 Msa0161230:CDS 35.0%
AAGTCAAATTGAGCCTCTTA+CGG - chr1_4:35993978-35993997 Msa0161230:intron 35.0%
CACCAAATACTTGGTATATG+TGG - chr1_4:35994003-35994022 Msa0161230:intron 35.0%
ACCCACATATACCAAGTATT+TGG + chr1_4:35994008-35994027 None:intergenic 35.0%
ATGTAGTTAGCCATATTAGG+AGG + chr1_4:35994132-35994151 None:intergenic 35.0%
TCCTAATATGGCTAACTACA+TGG - chr1_4:35994131-35994150 Msa0161230:intron 35.0%
CCTAATATGGCTAACTACAT+GGG - chr1_4:35994132-35994151 Msa0161230:intron 35.0%
CGTAACTGCAATTTATACCA+TGG - chr1_4:35994552-35994571 Msa0161230:intron 35.0%
TTCCTTCAATCATATGGGTA+GGG - chr1_4:35994758-35994777 Msa0161230:CDS 35.0%
TATAATGTGAGGGTTGGAAT+TGG + chr1_4:35994787-35994806 None:intergenic 35.0%
GTAGTTTATAATGTGAGGGT+TGG + chr1_4:35994793-35994812 None:intergenic 35.0%
TTACATAGAATCTACGAACC+TGG - chr1_4:35994846-35994865 Msa0161230:intron 35.0%
GGAGTCACATTATAAAATCC+AGG + chr1_4:35994867-35994886 None:intergenic 35.0%
AAGATATACACAGCTAGAGA+GGG - chr1_4:35994976-35994995 Msa0161230:intron 35.0%
!! GGCCTTTAAGATATCTTTCA+TGG - chr1_4:35995305-35995324 Msa0161230:intron 35.0%
ATCATAAACACGTGAGACTA+TGG - chr1_4:35995423-35995442 Msa0161230:intron 35.0%
AAAAGCAACAAGTTATGGTG+AGG + chr1_4:35995559-35995578 None:intergenic 35.0%
!! TCTAGAACACAAACACGTTT+TGG - chr1_4:35995586-35995605 Msa0161230:intron 35.0%
! CTAGAACACAAACACGTTTT+GGG - chr1_4:35995587-35995606 Msa0161230:intron 35.0%
TATGAAGTGAGTGTGTGAAT+TGG + chr1_4:35995813-35995832 None:intergenic 35.0%
AGTCATTGGCCAAACAATAT+TGG + chr1_4:35995855-35995874 None:intergenic 35.0%
TAGGCAAATATGTGTTTGGT+CGG + chr1_4:35995893-35995912 None:intergenic 35.0%
AAAGGTCCTATAATTAGGGA+CGG + chr1_4:35996179-35996198 None:intergenic 35.0%
! AAGGGTCTTATAATTAGGGA+TGG - chr1_4:35996435-35996454 Msa0161230:CDS 35.0%
ATTGGACTGATATATATGGG+TGG + chr1_4:35996520-35996539 None:intergenic 35.0%
TAGTTACCTCTCGATAGATT+CGG - chr1_4:35996624-35996643 Msa0161230:intron 35.0%
! AGGAATTGGGAGAGAATTTT+CGG - chr1_4:35996652-35996671 Msa0161230:intron 35.0%
!!! GAGAATTTTCGGGTTTTAAG+AGG - chr1_4:35996663-35996682 Msa0161230:intron 35.0%
! CAACTTGGTCAATTTTGCTA+CGG + chr1_4:35996915-35996934 None:intergenic 35.0%
GCATATTGAAAAAGTTGGAC+AGG + chr1_4:35997308-35997327 None:intergenic 35.0%
AGAACTTGACTGAGAAAAGA+AGG - chr1_4:35997598-35997617 Msa0161230:intron 35.0%
TGATGGTCATGCATATGATG+AGG + chr1_4:35989954-35989973 None:intergenic 40.0%
!! CTCTGTCTAAGGGTTTGTTT+TGG - chr1_4:35990501-35990520 Msa0161230:intron 40.0%
ACAGAGAACTCATCATCATC+AGG - chr1_4:35990968-35990987 Msa0161230:intron 40.0%
GGGAAAATGTTAAGAGTTGG+TGG + chr1_4:35991004-35991023 None:intergenic 40.0%
!! CTACATGCATTGGTTGAGAT+GGG + chr1_4:35991024-35991043 None:intergenic 40.0%
ACCACCACCATCTAATTCAA+AGG - chr1_4:35991045-35991064 Msa0161230:intron 40.0%
! ACCTTTGAATTAGATGGTGG+TGG + chr1_4:35991049-35991068 None:intergenic 40.0%
! CAGAAGGGTTTTCATTTCGT+TGG + chr1_4:35991318-35991337 None:intergenic 40.0%
ACCAAAAACACCAGATCCTA+AGG - chr1_4:35991535-35991554 Msa0161230:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+TGG + chr1_4:35991539-35991558 None:intergenic 40.0%
! AAGACTTGCTCAGAATAGAG+AGG - chr1_4:35991643-35991662 Msa0161230:intron 40.0%
CATAAGCCTGAGAAAAAGAG+AGG + chr1_4:35991830-35991849 None:intergenic 40.0%
TTCAGCAGCTAGAAACAAGT+AGG - chr1_4:35991850-35991869 Msa0161230:intron 40.0%
ACGACTAGTACGATTCTCTA+CGG - chr1_4:35991963-35991982 Msa0161230:intron 40.0%
GTCCTATTGTTGGATCAAGA+TGG + chr1_4:35992284-35992303 None:intergenic 40.0%
GCAATGTTTGATGTGGAGTA+TGG - chr1_4:35992508-35992527 Msa0161230:intron 40.0%
! ACTTGCATGAAAATGGGCTT+AGG - chr1_4:35992590-35992609 Msa0161230:intron 40.0%
CAGACCATCTGAACTCATTA+AGG - chr1_4:35992753-35992772 Msa0161230:intron 40.0%
ATTTGGACCCCAAAGATTTG+AGG + chr1_4:35993036-35993055 None:intergenic 40.0%
TTAGGGGGAAAATTGGGTAT+TGG + chr1_4:35993603-35993622 None:intergenic 40.0%
GGTCAATTAGGGGGAAAATT+GGG + chr1_4:35993609-35993628 None:intergenic 40.0%
TGGTCAATTAGGGGGAAAAT+TGG + chr1_4:35993610-35993629 None:intergenic 40.0%
CGAGTTTATGGTCAATTAGG+GGG + chr1_4:35993618-35993637 None:intergenic 40.0%
GTTGCAACAATCAACACAAG+AGG - chr1_4:35994026-35994045 Msa0161230:intron 40.0%
CCCATGTAGTTAGCCATATT+AGG + chr1_4:35994135-35994154 None:intergenic 40.0%
! AATAGTGGAGAGCTTGTTCA+TGG + chr1_4:35994172-35994191 None:intergenic 40.0%
GCTCACATCACATATTGCAT+CGG - chr1_4:35994445-35994464 Msa0161230:intron 40.0%
CTCACATCACATATTGCATC+GGG - chr1_4:35994446-35994465 Msa0161230:intron 40.0%
TAAGTCCATAACTGATCTCG+TGG - chr1_4:35994711-35994730 Msa0161230:intron 40.0%
AAGTCCATAACTGATCTCGT+GGG - chr1_4:35994712-35994731 Msa0161230:intron 40.0%
GTTCCTTCAATCATATGGGT+AGG - chr1_4:35994757-35994776 Msa0161230:CDS 40.0%
CAAGATATACACAGCTAGAG+AGG - chr1_4:35994975-35994994 Msa0161230:intron 40.0%
AGATATACACAGCTAGAGAG+GGG - chr1_4:35994977-35994996 Msa0161230:intron 40.0%
AAAGGTAAGGACAAGTTGCA+CGG - chr1_4:35995284-35995303 Msa0161230:intron 40.0%
CCATGACATCACACAGATAT+GGG + chr1_4:35995503-35995522 None:intergenic 40.0%
ACCATGACATCACACAGATA+TGG + chr1_4:35995504-35995523 None:intergenic 40.0%
!! AACACAAACACGTTTTGGGT+TGG - chr1_4:35995591-35995610 Msa0161230:intron 40.0%
ATATGTGTTTGGTCGGTCTT+GGG + chr1_4:35995886-35995905 None:intergenic 40.0%
AATATGTGTTTGGTCGGTCT+TGG + chr1_4:35995887-35995906 None:intergenic 40.0%
! TATCCTTTAAGAGAGAGGGT+TGG - chr1_4:35996275-35996294 Msa0161230:intron 40.0%
! GGTCTTATAATTAGGGATGG+AGG - chr1_4:35996438-35996457 Msa0161230:CDS 40.0%
TAGGGATGGAGGTAGTATAT+AGG - chr1_4:35996449-35996468 Msa0161230:CDS 40.0%
ACTGATATATATGGGTGGTC+AGG + chr1_4:35996515-35996534 None:intergenic 40.0%
ATCAGTCCAATGAATGGGAT+TGG - chr1_4:35996529-35996548 Msa0161230:intron 40.0%
TCAGAACCAATCCCATTCAT+TGG + chr1_4:35996538-35996557 None:intergenic 40.0%
AGTTACCTCTCGATAGATTC+GGG - chr1_4:35996625-35996644 Msa0161230:intron 40.0%
TAGATTCGGGGTTTAGGAAT+TGG - chr1_4:35996638-35996657 Msa0161230:intron 40.0%
AGATTCGGGGTTTAGGAATT+GGG - chr1_4:35996639-35996658 Msa0161230:intron 40.0%
! GGAATTGGGAGAGAATTTTC+GGG - chr1_4:35996653-35996672 Msa0161230:intron 40.0%
CAAGTAGTTGCTAGGCATAG+AGG + chr1_4:35990012-35990031 None:intergenic 45.0%
CTAAGGAGATCATGACACCA+AGG + chr1_4:35990738-35990757 None:intergenic 45.0%
!! GCTACATGCATTGGTTGAGA+TGG + chr1_4:35991025-35991044 None:intergenic 45.0%
!!! GGACGGTTGAGATGGTTTTT+TGG + chr1_4:35991281-35991300 None:intergenic 45.0%
AAAACCATCTCAACCGTCCA+TGG - chr1_4:35991282-35991301 Msa0161230:intron 45.0%
! GTACCTACCTTGACAGGTTT+TGG + chr1_4:35991352-35991371 None:intergenic 45.0%
GCAGAAAGAGAACAATCGCA+AGG - chr1_4:35991484-35991503 Msa0161230:intron 45.0%
CAGCAAGAAAAAGCAGGCTT+AGG - chr1_4:35991666-35991685 Msa0161230:intron 45.0%
CAATCTACTGCAGCAAACTC+AGG - chr1_4:35991999-35992018 Msa0161230:intron 45.0%
TGCAGCAAACTCAGGAGAAT+CGG - chr1_4:35992007-35992026 Msa0161230:intron 45.0%
!!! TTTTAGGGCGTGTTAATGGG+TGG - chr1_4:35992327-35992346 Msa0161230:intron 45.0%
AGAGGCTGCAATGTTTGATG+TGG - chr1_4:35992501-35992520 Msa0161230:intron 45.0%
TGTTTGATGTGGAGTATGGG+AGG - chr1_4:35992512-35992531 Msa0161230:intron 45.0%
ACATGAAGCAACGTTCAGCT+GGG + chr1_4:35992720-35992739 None:intergenic 45.0%
GAACGTTGCTTCATGTGGAT+TGG - chr1_4:35992724-35992743 Msa0161230:intron 45.0%
!! AGTATTTGGTGCTCCGTAAG+AGG + chr1_4:35993994-35994013 None:intergenic 45.0%
! CTTACGGAGCACCAAATACT+TGG - chr1_4:35993994-35994013 Msa0161230:intron 45.0%
ATCAACACAAGAGGCAGAAG+AGG - chr1_4:35994035-35994054 Msa0161230:intron 45.0%
GGCTAACTACATGGGACAAA+TGG - chr1_4:35994140-35994159 Msa0161230:intron 45.0%
AGTCCATAACTGATCTCGTG+GGG - chr1_4:35994713-35994732 Msa0161230:intron 45.0%
GTCCCTACCCATATGATTGA+AGG + chr1_4:35994763-35994782 None:intergenic 45.0%
ATGCATTCCTCACTCTCATG+AGG - chr1_4:35994820-35994839 Msa0161230:intron 45.0%
GTAACAACCTCATGAGAGTG+AGG + chr1_4:35994830-35994849 None:intergenic 45.0%
GAGACTATGGCAGATTAGTG+TGG - chr1_4:35995436-35995455 Msa0161230:intron 45.0%
CCCATATCTGTGTGATGTCA+TGG - chr1_4:35995500-35995519 Msa0161230:intron 45.0%
CTTGGGGGTTGTTAAGTCAT+TGG + chr1_4:35995869-35995888 None:intergenic 45.0%
TATGTGTTTGGTCGGTCTTG+GGG + chr1_4:35995885-35995904 None:intergenic 45.0%
CTACCTCCGTCCCTAATTAT+AGG - chr1_4:35996170-35996189 Msa0161230:intron 45.0%
CAACCAACCCTCTCTCTTAA+AGG + chr1_4:35996281-35996300 None:intergenic 45.0%
GGATGGAGGTAGTATATAGG+AGG - chr1_4:35996452-35996471 Msa0161230:CDS 45.0%
!! AGGAGGTCAAAGTGTTGCTT+TGG - chr1_4:35996469-35996488 Msa0161230:CDS 45.0%
!! AGGTCAAAGTGTTGCTTTGG+TGG - chr1_4:35996472-35996491 Msa0161230:CDS 45.0%
! TTGGTGGTCTTACCCTTTAG+CGG - chr1_4:35996488-35996507 Msa0161230:CDS 45.0%
GTTACCTCTCGATAGATTCG+GGG - chr1_4:35996626-35996645 Msa0161230:intron 45.0%
TAAACCCCGAATCTATCGAG+AGG + chr1_4:35996633-35996652 None:intergenic 45.0%
TCTCGATAGATTCGGGGTTT+AGG - chr1_4:35996632-35996651 Msa0161230:intron 45.0%
! CTTGGTCAATTTTGCTACGG+TGG + chr1_4:35996912-35996931 None:intergenic 45.0%
GATGCAGACGATGAACTGTT+TGG + chr1_4:35997870-35997889 None:intergenic 45.0%
TCGTCAAGCTGCAAGATGTT+TGG - chr1_4:35997903-35997922 Msa0161230:CDS 45.0%
!! TTCGAGCATTGAGTTCTCTC+TGG - chr1_4:35997953-35997972 Msa0161230:CDS 45.0%
!! TTAAAATGATAAAATAAATT+TGG + chr1_4:35990174-35990193 None:intergenic 5.0%
!! AAAATTAATAAAATCAAAAT+TGG + chr1_4:35990670-35990689 None:intergenic 5.0%
!! TAAAAAAAAAATAAAAATAG+AGG + chr1_4:35991936-35991955 None:intergenic 5.0%
!! TTATATATTTATACTATATA+TGG - chr1_4:35995655-35995674 Msa0161230:intron 5.0%
!! GGAGCCACTTGTTATTGGAG+AGG + chr1_4:35991260-35991279 None:intergenic 50.0%
AACTCCATGGACGGTTGAGA+TGG + chr1_4:35991289-35991308 None:intergenic 50.0%
ATCTCAACCGTCCATGGAGT+TGG - chr1_4:35991288-35991307 Msa0161230:intron 50.0%
! TGGTTTGCCAACTCCATGGA+CGG + chr1_4:35991298-35991317 None:intergenic 50.0%
!! TCGTTGGTTTGCCAACTCCA+TGG + chr1_4:35991302-35991321 None:intergenic 50.0%
!!! TTGACAGGTTTTGGTGGTGC+AGG + chr1_4:35991343-35991362 None:intergenic 50.0%
TGCACCACCAAAACCTGTCA+AGG - chr1_4:35991342-35991361 Msa0161230:intron 50.0%
!! CCTACCTTGACAGGTTTTGG+TGG + chr1_4:35991349-35991368 None:intergenic 50.0%
CCACCAAAACCTGTCAAGGT+AGG - chr1_4:35991346-35991365 Msa0161230:intron 50.0%
GAGAGGCAGCAAGAAAAAGC+AGG - chr1_4:35991660-35991679 Msa0161230:intron 50.0%
! GGTGCTGTGAATTCCCTTAC+AGG - chr1_4:35991694-35991713 Msa0161230:intron 50.0%
AGCGTGCTAGAGCTCAAGTA+AGG - chr1_4:35991904-35991923 Msa0161230:intron 50.0%
GATTCTCTACGGTGACTGCA+CGG - chr1_4:35991974-35991993 Msa0161230:intron 50.0%
GTGCAATCACCGCAGAGAAT+CGG + chr1_4:35992064-35992083 None:intergenic 50.0%
GATTCTCTGCGGTGATTGCA+CGG - chr1_4:35992063-35992082 Msa0161230:intron 50.0%
GGAATCTACTGCAGAGTCGT+TGG - chr1_4:35992087-35992106 Msa0161230:intron 50.0%
!! AATGGGTGGAGGTGCACTTT+TGG - chr1_4:35992341-35992360 Msa0161230:intron 50.0%
!! ATGGGTGGAGGTGCACTTTT+GGG - chr1_4:35992342-35992361 Msa0161230:intron 50.0%
TTGATGTGGAGTATGGGAGG+TGG - chr1_4:35992515-35992534 Msa0161230:intron 50.0%
CATGAAGCAACGTTCAGCTG+GGG + chr1_4:35992719-35992738 None:intergenic 50.0%
CACATGAAGCAACGTTCAGC+TGG + chr1_4:35992721-35992740 None:intergenic 50.0%
CAGCTGAACGTTGCTTCATG+TGG - chr1_4:35992719-35992738 Msa0161230:intron 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - chr1_4:35992727-35992746 Msa0161230:intron 50.0%
! CAAAGATTTGAGGCCAAGGG+CGG + chr1_4:35993026-35993045 None:intergenic 50.0%
GCCCTTGGCCTCAAATCTTT+GGG - chr1_4:35993025-35993044 Msa0161230:intron 50.0%
! CCCCAAAGATTTGAGGCCAA+GGG + chr1_4:35993029-35993048 None:intergenic 50.0%
CCCTTGGCCTCAAATCTTTG+GGG - chr1_4:35993026-35993045 Msa0161230:intron 50.0%
! ACCCCAAAGATTTGAGGCCA+AGG + chr1_4:35993030-35993049 None:intergenic 50.0%
!! CAGAAGAGGCACTTTCCCAA+GGG - chr1_4:35994049-35994068 Msa0161230:intron 50.0%
GTTGAGTGCATCAAGCCCTT+GGG + chr1_4:35994067-35994086 None:intergenic 50.0%
GATCCCCACGAGATCAGTTA+TGG + chr1_4:35994719-35994738 None:intergenic 50.0%
TAACTGATCTCGTGGGGATC+AGG - chr1_4:35994719-35994738 Msa0161230:intron 50.0%
ATGTGTTTGGTCGGTCTTGG+GGG + chr1_4:35995884-35995903 None:intergenic 50.0%
GGTCCTATAATTAGGGACGG+AGG + chr1_4:35996176-35996195 None:intergenic 50.0%
! TGGTGGTCTTACCCTTTAGC+GGG - chr1_4:35996489-35996508 Msa0161230:CDS 50.0%
! GTTGGAGGGTTAGGTTCTGA+TGG + chr1_4:35996598-35996617 None:intergenic 50.0%
GGTAACTACCTCTCGTTGGA+GGG + chr1_4:35996612-35996631 None:intergenic 50.0%
AGGTAACTACCTCTCGTTGG+AGG + chr1_4:35996613-35996632 None:intergenic 50.0%
GAGAGGTAACTACCTCTCGT+TGG + chr1_4:35996616-35996635 None:intergenic 50.0%
CACTGCAGGCAGATAATCTG+AGG - chr1_4:35997842-35997861 Msa0161230:CDS 50.0%
!! GGTGGTGGTGCTACATGCAT+TGG + chr1_4:35991034-35991053 None:intergenic 55.0%
!! TTGGTGGTGCAGGTGCAGAA+GGG + chr1_4:35991333-35991352 None:intergenic 55.0%
!! TTTGGTGGTGCAGGTGCAGA+AGG + chr1_4:35991334-35991353 None:intergenic 55.0%
!! CGACTGGTACCGATTCTCTG+CGG - chr1_4:35992052-35992071 Msa0161230:intron 55.0%
! TAGGGCGTGTTAATGGGTGG+AGG - chr1_4:35992330-35992349 Msa0161230:intron 55.0%
!! GCACTTTTGGGAGGAGACCA+AGG - chr1_4:35992354-35992373 Msa0161230:intron 55.0%
GGAGTATGGGAGGTGGTTAG+AGG - chr1_4:35992522-35992541 Msa0161230:intron 55.0%
!! GGTGGTTAGAGGAGCATCAC+AGG - chr1_4:35992533-35992552 Msa0161230:intron 55.0%
ATTGCCGTTACAGTCAGGGC+CGG - chr1_4:35992830-35992849 Msa0161230:intron 55.0%
! CAAAGATTTAGGGCCCTGGG+CGG + chr1_4:35992881-35992900 None:intergenic 55.0%
GCCCAGGGCCCTAAATCTTT+GGG - chr1_4:35992880-35992899 Msa0161230:intron 55.0%
! CCCCAAAGATTTAGGGCCCT+GGG + chr1_4:35992884-35992903 None:intergenic 55.0%
CCCAGGGCCCTAAATCTTTG+GGG - chr1_4:35992881-35992900 Msa0161230:intron 55.0%
! ACCCCAAAGATTTAGGGCCC+TGG + chr1_4:35992885-35992904 None:intergenic 55.0%
GATGCCGTTACGATTAGCGC+CGG - chr1_4:35992975-35992994 Msa0161230:intron 55.0%
CGCCCTTGGCCTCAAATCTT+TGG - chr1_4:35993024-35993043 Msa0161230:intron 55.0%
!! GCAGAAGAGGCACTTTCCCA+AGG - chr1_4:35994048-35994067 Msa0161230:intron 55.0%
GGTTGAGTGCATCAAGCCCT+TGG + chr1_4:35994068-35994087 None:intergenic 55.0%
TGATCTCGTGGGGATCAGGT+AGG - chr1_4:35994723-35994742 Msa0161230:intron 55.0%
GAACCTAACCCTCCAACGAG+AGG - chr1_4:35996601-35996620 Msa0161230:intron 55.0%
CTACCTCTCGTTGGAGGGTT+AGG + chr1_4:35996607-35996626 None:intergenic 55.0%
TCTCTGCGGTGATTGCACGG+TGG - chr1_4:35992066-35992085 Msa0161230:intron 60.0%
!! GGTGGAGGTGCACTTTTGGG+AGG - chr1_4:35992345-35992364 Msa0161230:intron 60.0%
AGCTCACCTTGCACGCCCAT+CGG + chr1_4:35992857-35992876 None:intergenic 60.0%
CGCCCAGGGCCCTAAATCTT+TGG - chr1_4:35992879-35992898 Msa0161230:intron 60.0%
TGGGCCGGCGCTAATCGTAA+CGG + chr1_4:35992982-35993001 None:intergenic 60.0%
!! TACGATTAGCGCCGGCCCAA+TGG - chr1_4:35992983-35993002 Msa0161230:intron 60.0%
!! ACGATTAGCGCCGGCCCAAT+GGG - chr1_4:35992984-35993003 Msa0161230:intron 60.0%
GCTCACCTTGCACGCCCATT+GGG + chr1_4:35993001-35993020 None:intergenic 60.0%
! AGATTTGAGGCCAAGGGCGG+TGG + chr1_4:35993023-35993042 None:intergenic 60.0%
GCTCACCTTGCACGCCCATC+GGG + chr1_4:35992856-35992875 None:intergenic 65.0%
TGCAAGGTGAGCTACCGCCC+AGG - chr1_4:35992864-35992883 Msa0161230:intron 65.0%
GCAAGGTGAGCTACCGCCCA+GGG - chr1_4:35992865-35992884 Msa0161230:intron 65.0%
ACCTTGCACGCCCATTGGGC+CGG + chr1_4:35992997-35993016 None:intergenic 65.0%
GGCTCACCTTGCACGCCCAT+TGG + chr1_4:35993002-35993021 None:intergenic 65.0%
GGGTGGTCAGGCCCGCTAAA+GGG + chr1_4:35996503-35996522 None:intergenic 65.0%
TGGGTGGTCAGGCCCGCTAA+AGG + chr1_4:35996504-35996523 None:intergenic 65.0%
CGGGCCGGCCCTGACTGTAA+CGG + chr1_4:35992837-35992856 None:intergenic 70.0%
TACAGTCAGGGCCGGCCCGA+TGG - chr1_4:35992838-35992857 Msa0161230:intron 70.0%
ACAGTCAGGGCCGGCCCGAT+GGG - chr1_4:35992839-35992858 Msa0161230:intron 70.0%
ACCTTGCACGCCCATCGGGC+CGG + chr1_4:35992852-35992871 None:intergenic 70.0%
GCAAGGTGAGCCACCGCCCT+TGG - chr1_4:35993010-35993029 Msa0161230:intron 70.0%
GCCGGCCCAATGGGCGTGCA+AGG - chr1_4:35992993-35993012 Msa0161230:intron 75.0%
! GCCGGCCCGATGGGCGTGCA+AGG - chr1_4:35992848-35992867 Msa0161230:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 35989753 35997999 35989753 ID=Msa0161230;Name=Msa0161230
chr1_4 mRNA 35989753 35997999 35989753 ID=Msa0161230-mRNA-1;Parent=Msa0161230;Name=Msa0161230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|12|0|537
chr1_4 exon 35997722 35997999 35997722 ID=Msa0161230-mRNA-1:exon:10701;Parent=Msa0161230-mRNA-1
chr1_4 exon 35997392 35997498 35997392 ID=Msa0161230-mRNA-1:exon:10700;Parent=Msa0161230-mRNA-1
chr1_4 exon 35996686 35996780 35996686 ID=Msa0161230-mRNA-1:exon:10699;Parent=Msa0161230-mRNA-1
chr1_4 exon 35996389 35996511 35996389 ID=Msa0161230-mRNA-1:exon:10698;Parent=Msa0161230-mRNA-1
chr1_4 exon 35996196 35996264 35996196 ID=Msa0161230-mRNA-1:exon:10697;Parent=Msa0161230-mRNA-1
chr1_4 exon 35996058 35996117 35996058 ID=Msa0161230-mRNA-1:exon:10696;Parent=Msa0161230-mRNA-1
chr1_4 exon 35995832 35995909 35995832 ID=Msa0161230-mRNA-1:exon:10695;Parent=Msa0161230-mRNA-1
chr1_4 exon 35995344 35995419 35995344 ID=Msa0161230-mRNA-1:exon:10694;Parent=Msa0161230-mRNA-1
chr1_4 exon 35994978 35995249 35994978 ID=Msa0161230-mRNA-1:exon:10693;Parent=Msa0161230-mRNA-1
chr1_4 exon 35994738 35994803 35994738 ID=Msa0161230-mRNA-1:exon:10692;Parent=Msa0161230-mRNA-1
chr1_4 exon 35993543 35993782 35993543 ID=Msa0161230-mRNA-1:exon:10691;Parent=Msa0161230-mRNA-1
chr1_4 exon 35989753 35989902 35989753 ID=Msa0161230-mRNA-1:exon:10690;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35997722 35997999 35997722 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35997392 35997498 35997392 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35996686 35996780 35996686 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35996389 35996511 35996389 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35996196 35996264 35996196 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35996058 35996117 35996058 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35995832 35995909 35995832 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35995344 35995419 35995344 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35994978 35995249 35994978 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35994738 35994803 35994738 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35993543 35993782 35993543 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
chr1_4 CDS 35989753 35989902 35989753 ID=Msa0161230-mRNA-1:cds;Parent=Msa0161230-mRNA-1
Gene Sequence

>Msa0161230

ATGGGGTTTTCTTTGGCTTTTGAAGAAGCTGAACAACAAGACCAAGTAGATGCAAGTTTTTTAGGTACCAATAATAACAATTCTATGCTCATGGCTTCCAAAAACTCACATGAATCTCAACATGAATCTCTTCAACAACAACAACAAAACCATCAAAATCTTCTTCATCATCACCAACAACAACAGAATCAACATCATCCTCATCATATGCATGACCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATGCCTAGCAACTACTTAAACAAAGATTCAAGTGCTTATGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTGGATGGACAAGCACAAGCTGATCCTTCTAGTGTTCAAGATCAAAGACAGAACTCATCATCATCAGGAATGAAGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTAGCACCACCACCATCTAATTCAAAGGTTAGCATGGGATTAACCTCTCCAATAACAAGTGGCTCCAAAAAACCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAAACCCTTCTGCACCTGCACCACCAAAACCTGTCAAGAAAGAGAACAATCGCAAGGCTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGAAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTACAGCGTGCTAGAGCTCAAGGCGTGTTAATGGGTGGAGGTGCACTTTTGGGAGGAGACCAAGGAATTCCAATTTCTATGAATAGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAGTATGGGAGGTGGTTAGAGGAGCATCACAGGCTAGTGTGTGAGCTAAGAGCAGCAGTAGATGAACACTTGCATGAAAATGGGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAACCTCAAAAATGTTCTAGCTAGAACAGATGTGTTCCATCTTGTTTTTGGAATGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGGAATATGTAATCAAAATTGCAGTTATGATGCCGTTACGATTAGCGCCGGCCCAATGGGCGTGCAAGATAATTGTAAGTCAAATTGAGCCTCTTACGGAGCACCAAATACTTGGTATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCACTTTCCCAAGGGCTTGATGCACTCAACCAATCTCTTTCAGAGACTATAACATCAGACTCTTTAAGCAATCCTCCTAATATGGCTAACTACATGGGACAAATGGCTCTTGCCATGAACAAGCTCTCCACTATTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAGTTCATCGTCTGCATCAGTTGTTAACAGTTCGTCAAGCTGCAAGATGTTTGGTTGCAATGTCTGAGTACTTTCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGTCCTCGCCAAGAATAG

Protein sequence

>Msa0161230

MGFSLAFEEAEQQDQVDASFLGTNNNNSMLMASKNSHESQHESLQQQQQNHQNLLHHHQQQQNQHHPHHMHDHQISFGMMPSSSSSSMPSNYLNKDSSAYDLGELDQAFFLYLDGQAQADPSSVQDQRQNSSSSGMKPPPTLNIFPSQPMHVAPPPSNSKVSMGLTSPITSGSKKPSQPSMELANQRNENPSAPAPPKPVKKENNRKATTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGVLMGGGALLGGDQGIPISMNSISSEAAMFDVEYGRWLEEHHRLVCELRAAVDEHLHENGLRLYVENCLAHYDQVINLKNVLARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKEYVIKIAVMMPLRLAPAQWACKIIVSQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSNPPNMANYMGQMALAMNKLSTIESFVRQADNLRHQTVHRLHQLLTVRQAARCLVAMSEYFHRLRALSSLWLTRPRQE*