Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131810 | XP_003591212.1 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131810 | sp|Q9XF98|CALR_PRUAR | 86.881 | 404 | 52 | 1 | 27 | 430 | 1 | 403 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131810 | G7I9H2 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0131810 | 0.840559 | 8.082452e-58 | -8.615850e-47 |
| Msa0018920 | Msa0131810 | 0.811319 | 7.428354e-51 | -8.615850e-47 |
| Msa0021320 | Msa0131810 | 0.803306 | 3.713292e-49 | -8.615850e-47 |
| Msa0027800 | Msa0131810 | 0.815854 | 7.468332e-52 | -8.615850e-47 |
| Msa0030070 | Msa0131810 | 0.823953 | 1.049415e-53 | -8.615850e-47 |
| Msa0032980 | Msa0131810 | 0.809858 | 1.537078e-50 | -8.615850e-47 |
| Msa0036810 | Msa0131810 | 0.807827 | 4.179333e-50 | -8.615850e-47 |
| Msa0038530 | Msa0131810 | 0.804486 | 2.111282e-49 | -8.615850e-47 |
| Msa0045620 | Msa0131810 | 0.819767 | 9.770435e-53 | -8.615850e-47 |
| Msa0050530 | Msa0131810 | 0.826475 | 2.658078e-54 | -8.615850e-47 |
| Msa0063190 | Msa0131810 | 0.807111 | 5.929432e-50 | -8.615850e-47 |
| Msa0080370 | Msa0131810 | 0.984866 | 7.992766e-162 | -8.615850e-47 |
| Msa0080440 | Msa0131810 | 0.967206 | 5.847121e-127 | -8.615850e-47 |
| Msa0091350 | Msa0131810 | 0.832189 | 1.089475e-55 | -8.615850e-47 |
| Msa0094180 | Msa0131810 | 0.808914 | 2.450138e-50 | -8.615850e-47 |
| Msa0100600 | Msa0131810 | 0.855286 | 6.985894e-62 | -8.615850e-47 |
| Msa0100890 | Msa0131810 | 0.846023 | 2.817480e-59 | -8.615850e-47 |
| Msa0108630 | Msa0131810 | 0.810293 | 1.238901e-50 | -8.615850e-47 |
| Msa0125590 | Msa0131810 | 0.835947 | 1.247184e-56 | -8.615850e-47 |
| Msa0127340 | Msa0131810 | 0.830360 | 3.069259e-55 | -8.615850e-47 |
| Msa0131810 | Msa0132700 | 0.810376 | 1.188630e-50 | -8.615850e-47 |
| Msa0131810 | Msa0147680 | 0.809503 | 1.832736e-50 | -8.615850e-47 |
| Msa0131810 | Msa0156090 | 0.809992 | 1.438590e-50 | -8.615850e-47 |
| Msa0131810 | Msa0165830 | 0.803922 | 2.766232e-49 | -8.615850e-47 |
| Msa0131810 | Msa0168380 | 0.831608 | 1.515989e-55 | -8.615850e-47 |
| Msa0131810 | Msa0170070 | 0.801304 | 9.590379e-49 | -8.615850e-47 |
| Msa0131810 | Msa0173250 | 0.929763 | 4.357229e-93 | -8.615850e-47 |
| Msa0131810 | Msa0192050 | 0.809086 | 2.250743e-50 | -8.615850e-47 |
| Msa0131810 | Msa0204970 | 0.831316 | 1.788925e-55 | -8.615850e-47 |
| Msa0131810 | Msa0206370 | 0.818858 | 1.574315e-52 | -8.615850e-47 |
| Msa0131810 | Msa0221180 | 0.809442 | 1.888760e-50 | -8.615850e-47 |
| Msa0131810 | Msa0225800 | 0.820047 | 8.429466e-53 | -8.615850e-47 |
| Msa0131810 | Msa0241040 | 0.807413 | 5.117544e-50 | -8.615850e-47 |
| Msa0131810 | Msa0249870 | 0.814635 | 1.393745e-51 | -8.615850e-47 |
| Msa0131810 | Msa0260630 | 0.810321 | 1.221812e-50 | -8.615850e-47 |
| Msa0131810 | Msa0260980 | 0.833016 | 6.792010e-56 | -8.615850e-47 |
| Msa0131810 | Msa0279000 | 0.804867 | 1.757807e-49 | -8.615850e-47 |
| Msa0131810 | Msa0281540 | 0.830864 | 2.309462e-55 | -8.615850e-47 |
| Msa0131810 | Msa0288400 | 0.810020 | 1.418702e-50 | -8.615850e-47 |
| Msa0131810 | Msa0312740 | 0.811779 | 5.901674e-51 | -8.615850e-47 |
| Msa0131810 | Msa0320580 | 0.831554 | 1.563021e-55 | -8.615850e-47 |
| Msa0131810 | Msa0336430 | 0.802562 | 5.289954e-49 | -8.615850e-47 |
| Msa0131810 | Msa0336520 | 0.819934 | 8.948832e-53 | -8.615850e-47 |
| Msa0131810 | Msa0341680 | 0.804058 | 2.591495e-49 | -8.615850e-47 |
| Msa0131810 | Msa0342220 | 0.808947 | 2.411058e-50 | -8.615850e-47 |
| Msa0131810 | Msa0344110 | 0.833985 | 3.893320e-56 | -8.615850e-47 |
| Msa0131810 | Msa0354840 | 0.807941 | 3.952027e-50 | -8.615850e-47 |
| Msa0131810 | Msa0356640 | 0.813243 | 2.825240e-51 | -8.615850e-47 |
| Msa0131810 | Msa0368920 | 0.815379 | 9.528731e-52 | -8.615850e-47 |
| Msa0131810 | Msa0372100 | 0.818614 | 1.787809e-52 | -8.615850e-47 |
| Msa0131810 | Msa0373170 | 0.839652 | 1.393715e-57 | -8.615850e-47 |
| Msa0131810 | Msa0388250 | 0.860855 | 1.543567e-63 | -8.615850e-47 |
| Msa0131810 | Msa0388620 | 0.822680 | 2.081361e-53 | -8.615850e-47 |
| Msa0131810 | Msa0401060 | 0.834872 | 2.330973e-56 | -8.615850e-47 |
| Msa0131810 | Msa0416210 | 0.847483 | 1.123831e-59 | -8.615850e-47 |
| Msa0131810 | Msa0421750 | 0.837178 | 6.058416e-57 | -8.615850e-47 |
| Msa0131810 | Msa0422820 | 0.829142 | 6.074772e-55 | -8.615850e-47 |
| Msa0131810 | Msa0422900 | 0.807282 | 5.454623e-50 | -8.615850e-47 |
| Msa0131810 | Msa0429970 | 0.811173 | 7.993375e-51 | -8.615850e-47 |
| Msa0131810 | Msa0433630 | 0.833264 | 5.891995e-56 | -8.615850e-47 |
| Msa0131810 | Msa0436100 | 0.810682 | 1.020787e-50 | -8.615850e-47 |
| Msa0131810 | Msa0437480 | 0.817469 | 3.245768e-52 | -8.615850e-47 |
| Msa0131810 | Msa0447870 | 0.819106 | 1.382273e-52 | -8.615850e-47 |
| Msa0131810 | Msa0456670 | 0.806020 | 1.007368e-49 | -8.615850e-47 |
| Msa0131810 | Msa0458100 | 0.843955 | 1.019191e-58 | -8.615850e-47 |
| Msa0131810 | Msa0466520 | 0.814320 | 1.635936e-51 | -8.615850e-47 |
| Msa0131810 | Msa0467690 | 0.838173 | 3.366413e-57 | -8.615850e-47 |
| Msa0131810 | Msa0469060 | 0.837365 | 5.427021e-57 | -8.615850e-47 |
| Msa0131810 | Msa0477480 | 0.801687 | 8.004305e-49 | -8.615850e-47 |
| Msa0131810 | Msa0495620 | 0.819725 | 9.986882e-53 | -8.615850e-47 |
| Msa0131810 | Msa0504720 | 0.812840 | 3.462274e-51 | -8.615850e-47 |
| Msa0131810 | Msa0506750 | 0.839021 | 2.032307e-57 | -8.615850e-47 |
| Msa0131810 | Msa0507810 | 0.801245 | 9.861032e-49 | -8.615850e-47 |
| Msa0131810 | Msa0514020 | 0.844101 | 9.311201e-59 | -8.615850e-47 |
| Msa0131810 | Msa0521510 | 0.821399 | 4.121353e-53 | -8.615850e-47 |
| Msa0131810 | Msa0521530 | 0.818519 | 1.878572e-52 | -8.615850e-47 |
| Msa0131810 | Msa0527850 | 0.830310 | 3.155332e-55 | -8.615850e-47 |
| Msa0131810 | Msa0532160 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0131810 | Msa0541740 | 0.821885 | 3.182965e-53 | -8.615850e-47 |
| Msa0131810 | Msa0544410 | 0.803499 | 3.385759e-49 | -8.615850e-47 |
| Msa0131810 | Msa0553750 | 0.825775 | 3.899857e-54 | -8.615850e-47 |
| Msa0131810 | Msa0554300 | 0.815675 | 8.184795e-52 | -8.615850e-47 |
| Msa0131810 | Msa0564980 | 0.801021 | 1.095907e-48 | -8.615850e-47 |
| Msa0131810 | Msa0572830 | 0.846175 | 2.561753e-59 | -8.615850e-47 |
| Msa0131810 | Msa0574660 | 0.820282 | 7.446557e-53 | -8.615850e-47 |
| Msa0131810 | Msa0582460 | 0.840308 | 9.403024e-58 | -8.615850e-47 |
| Msa0131810 | Msa0586200 | 0.837897 | 3.963263e-57 | -8.615850e-47 |
| Msa0131810 | Msa0590000 | 0.814219 | 1.722441e-51 | -8.615850e-47 |
| Msa0131810 | Msa0607800 | 0.823271 | 1.515001e-53 | -8.615850e-47 |
| Msa0131810 | Msa0620500 | 0.821264 | 4.427816e-53 | -8.615850e-47 |
| Msa0131810 | Msa0623310 | 0.818124 | 2.309003e-52 | -8.615850e-47 |
| Msa0131810 | Msa0625620 | 0.825406 | 4.770830e-54 | -8.615850e-47 |
| Msa0131810 | Msa0630440 | 0.816628 | 5.013553e-52 | -8.615850e-47 |
| Msa0131810 | Msa0640800 | 0.804762 | 1.848780e-49 | -8.615850e-47 |
| Msa0131810 | Msa0647440 | 0.859852 | 3.103763e-63 | -8.615850e-47 |
| Msa0131810 | Msa0648040 | 0.843214 | 1.608152e-58 | -8.615850e-47 |
| Msa0131810 | Msa0648760 | 0.821840 | 3.260030e-53 | -8.615850e-47 |
| Msa0131810 | Msa0654740 | 0.800909 | 1.155408e-48 | -8.615850e-47 |
| Msa0131810 | Msa0657210 | 0.827865 | 1.235458e-54 | -8.615850e-47 |
| Msa0131810 | Msa0660090 | 0.829112 | 6.177137e-55 | -8.615850e-47 |
| Msa0131810 | Msa0661480 | 0.836390 | 9.623142e-57 | -8.615850e-47 |
| Msa0131810 | Msa0663290 | 0.821275 | 4.403456e-53 | -8.615850e-47 |
| Msa0131810 | Msa0664070 | 0.831644 | 1.484949e-55 | -8.615850e-47 |
| Msa0131810 | Msa0687090 | 0.800513 | 1.391300e-48 | -8.615850e-47 |
| Msa0131810 | Msa0687370 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0131810 | Msa0688380 | 0.815685 | 8.142940e-52 | -8.615850e-47 |
| Msa0131810 | Msa0688620 | 0.817171 | 3.785933e-52 | -8.615850e-47 |
| Msa0131810 | Msa0689830 | 0.821511 | 3.884433e-53 | -8.615850e-47 |
| Msa0131810 | Msa0690320 | 0.848899 | 4.567582e-60 | -8.615850e-47 |
| Msa0131810 | Msa0690740 | 0.848567 | 5.646173e-60 | -8.615850e-47 |
| Msa0131810 | Msa0701250 | 0.820793 | 5.685913e-53 | -8.615850e-47 |
| Msa0131810 | Msa0707260 | 0.824551 | 7.592247e-54 | -8.615850e-47 |
| Msa0131810 | Msa0708020 | 0.814475 | 1.511524e-51 | -8.615850e-47 |
| Msa0131810 | Msa0713080 | 0.840107 | 1.061133e-57 | -8.615850e-47 |
| Msa0131810 | Msa0717900 | 0.826685 | 2.368464e-54 | -8.615850e-47 |
| Msa0131810 | Msa0720280 | 0.812946 | 3.281524e-51 | -8.615850e-47 |
| Msa0131810 | Msa0749190 | 0.816904 | 4.346948e-52 | -8.615850e-47 |
| Msa0131810 | Msa0750520 | 0.822589 | 2.185036e-53 | -8.615850e-47 |
| Msa0131810 | Msa0751720 | 0.835525 | 1.595020e-56 | -8.615850e-47 |
| Msa0131810 | Msa0766860 | 0.802274 | 6.062521e-49 | -8.615850e-47 |
| Msa0131810 | Msa0773960 | 0.803323 | 3.682202e-49 | -8.615850e-47 |
| Msa0131810 | Msa0803140 | 0.820751 | 5.811553e-53 | -8.615850e-47 |
| Msa0131810 | Msa0816080 | 0.830918 | 2.240188e-55 | -8.615850e-47 |
| Msa0131810 | Msa0831820 | 0.832630 | 8.471445e-56 | -8.615850e-47 |
| Msa0131810 | Msa0837680 | 0.840731 | 7.288207e-58 | -8.615850e-47 |
| Msa0131810 | Msa0841500 | 0.807598 | 4.674053e-50 | -8.615850e-47 |
| Msa0131810 | Msa0846900 | 0.841457 | 4.697197e-58 | -8.615850e-47 |
| Msa0131810 | Msa0861440 | 0.827674 | 1.372900e-54 | -8.615850e-47 |
| Msa0131810 | Msa0866530 | 0.800004 | 1.765920e-48 | -8.615850e-47 |
| Msa0131810 | Msa0874730 | 0.801741 | 7.803785e-49 | -8.615850e-47 |
| Msa0131810 | Msa0876630 | 0.824426 | 8.122188e-54 | -8.615850e-47 |
| Msa0131810 | Msa0897790 | 0.817894 | 2.602123e-52 | -8.615850e-47 |
| Msa0131810 | Msa0900090 | 0.841450 | 4.716318e-58 | -8.615850e-47 |
| Msa0131810 | Msa0925330 | 0.825632 | 4.216438e-54 | -8.615850e-47 |
| Msa0131810 | Msa0926310 | 0.830242 | 3.279927e-55 | -8.615850e-47 |
| Msa0131810 | Msa0929900 | 0.800310 | 1.530111e-48 | -8.615850e-47 |
| Msa0131810 | Msa0945900 | 0.830469 | 2.885934e-55 | -8.615850e-47 |
| Msa0131810 | Msa0963370 | 0.801926 | 7.148964e-49 | -8.615850e-47 |
| Msa0131810 | Msa0966120 | 0.815072 | 1.114605e-51 | -8.615850e-47 |
| Msa0131810 | Msa0976380 | 0.829593 | 4.720778e-55 | -8.615850e-47 |
| Msa0131810 | Msa0978980 | 0.828451 | 8.924585e-55 | -8.615850e-47 |
| Msa0131810 | Msa0999950 | 0.816005 | 6.908966e-52 | -8.615850e-47 |
| Msa0131810 | Msa1000780 | 0.828875 | 7.048457e-55 | -8.615850e-47 |
| Msa0131810 | Msa1008850 | 0.835855 | 1.316141e-56 | -8.615850e-47 |
| Msa0131810 | Msa1019200 | 0.815306 | 9.892672e-52 | -8.615850e-47 |
| Msa0131810 | Msa1021560 | 0.836812 | 7.514183e-57 | -8.615850e-47 |
| Msa0131810 | Msa1025200 | 0.835256 | 1.865710e-56 | -8.615850e-47 |
| Msa0131810 | Msa1025220 | 0.814354 | 1.607761e-51 | -8.615850e-47 |
| Msa0131810 | Msa1026710 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0131810 | Msa1041370 | 0.819293 | 1.252954e-52 | -8.615850e-47 |
| Msa0131810 | Msa1050260 | 0.846143 | 2.612978e-59 | -8.615850e-47 |
| Msa0131810 | Msa1071410 | 0.823003 | 1.749727e-53 | -8.615850e-47 |
| Msa0131810 | Msa1078860 | 0.810703 | 1.010138e-50 | -8.615850e-47 |
| Msa0131810 | Msa1081270 | 0.828827 | 7.239761e-55 | -8.615850e-47 |
| Msa0131810 | Msa1085680 | 0.803885 | 2.815897e-49 | -8.615850e-47 |
| Msa0131810 | Msa1104110 | 0.812265 | 4.624018e-51 | -8.615850e-47 |
| Msa0131810 | Msa1105540 | 0.818817 | 1.607962e-52 | -8.615850e-47 |
| Msa0131810 | Msa1106220 | 0.815650 | 8.293602e-52 | -8.615850e-47 |
| Msa0131810 | Msa1138800 | 0.812096 | 5.033889e-51 | -8.615850e-47 |
| Msa0131810 | Msa1144990 | 0.810387 | 1.182437e-50 | -8.615850e-47 |
| Msa0131810 | Msa1147700 | 0.825828 | 3.787744e-54 | -8.615850e-47 |
| Msa0131810 | Msa1148630 | 0.809485 | 1.848655e-50 | -8.615850e-47 |
| Msa0131810 | Msa1148930 | 0.823201 | 1.573334e-53 | -8.615850e-47 |
| Msa0131810 | Msa1163180 | 0.808552 | 2.928419e-50 | -8.615850e-47 |
| Msa0131810 | Msa1168310 | 0.801904 | 7.225758e-49 | -8.615850e-47 |
| Msa0131810 | Msa1169690 | 0.802116 | 6.536122e-49 | -8.615850e-47 |
| Msa0131810 | Msa1188340 | 0.811970 | 5.363669e-51 | -8.615850e-47 |
| Msa0131810 | Msa1191000 | 0.801105 | 1.053594e-48 | -8.615850e-47 |
| Msa0131810 | Msa1199850 | 0.806086 | 9.755213e-50 | -8.615850e-47 |
| Msa0131810 | Msa1201780 | 0.835152 | 1.981130e-56 | -8.615850e-47 |
| Msa0131810 | Msa1206040 | 0.837521 | 4.949962e-57 | -8.615850e-47 |
| Msa0131810 | Msa1213830 | 0.808078 | 3.696222e-50 | -8.615850e-47 |
| Msa0131810 | Msa1215980 | 0.821162 | 4.674266e-53 | -8.615850e-47 |
| Msa0131810 | Msa1217890 | 0.836130 | 1.120557e-56 | -8.615850e-47 |
| Msa0131810 | Msa1220580 | 0.820917 | 5.324809e-53 | -8.615850e-47 |
| Msa0131810 | Msa1220720 | 0.809948 | 1.470261e-50 | -8.615850e-47 |
| Msa0131810 | Msa1226370 | 0.848698 | 5.192511e-60 | -8.615850e-47 |
| Msa0131810 | Msa1240940 | 0.831493 | 1.617639e-55 | -8.615850e-47 |
| Msa0131810 | Msa1252790 | 0.807666 | 4.522028e-50 | -8.615850e-47 |
| Msa0131810 | Msa1254420 | 0.841343 | 5.032239e-58 | -8.615850e-47 |
| Msa0131810 | Msa1254540 | 0.800254 | 1.570869e-48 | -8.615850e-47 |
| Msa0131810 | Msa1255830 | 0.809839 | 1.551602e-50 | -8.615850e-47 |
| Msa0131810 | Msa1255850 | 0.811760 | 5.957860e-51 | -8.615850e-47 |
| Msa0131810 | Msa1265570 | 0.816941 | 4.264927e-52 | -8.615850e-47 |
| Msa0131810 | Msa1267930 | 0.821287 | 4.374800e-53 | -8.615850e-47 |
| Msa0131810 | Msa1279120 | 0.804061 | 2.587805e-49 | -8.615850e-47 |
| Msa0131810 | Msa1282300 | 0.831239 | 1.868626e-55 | -8.615850e-47 |
| Msa0131810 | Msa1294280 | 0.824159 | 9.389619e-54 | -8.615850e-47 |
| Msa0131810 | Msa1294460 | 0.822450 | 2.353519e-53 | -8.615850e-47 |
| Msa0131810 | Msa1294790 | 0.856083 | 4.087356e-62 | -8.615850e-47 |
| Msa0131810 | Msa1297070 | 0.836910 | 7.094668e-57 | -8.615850e-47 |
| Msa0131810 | Msa1300460 | 0.803106 | 4.083780e-49 | -8.615850e-47 |
| Msa0131810 | Msa1301820 | 0.815538 | 8.784607e-52 | -8.615850e-47 |
| Msa0131810 | Msa1328280 | 0.838218 | 3.277671e-57 | -8.615850e-47 |
| Msa0131810 | Msa1328870 | 0.829717 | 4.401880e-55 | -8.615850e-47 |
| Msa0131810 | Msa1332950 | 0.810104 | 1.360530e-50 | -8.615850e-47 |
| Msa0131810 | Msa1334560 | 0.828184 | 1.035410e-54 | -8.615850e-47 |
| Msa0131810 | Msa1334670 | 0.820623 | 6.220493e-53 | -8.615850e-47 |
| Msa0131810 | Msa1342760 | 0.815601 | 8.502957e-52 | -8.615850e-47 |
| Msa0131810 | Msa1362590 | 0.807646 | 4.565405e-50 | -8.615850e-47 |
| Msa0131810 | Msa1364680 | 0.801320 | 9.521077e-49 | -8.615850e-47 |
| Msa0131810 | Msa1365230 | 0.818799 | 1.623362e-52 | -8.615850e-47 |
| Msa0131810 | Msa1368170 | 0.809035 | 2.308788e-50 | -8.615850e-47 |
| Msa0131810 | Msa1371800 | 0.827212 | 1.771821e-54 | -8.615850e-47 |
| Msa0131810 | Msa1372030 | 0.827480 | 1.528223e-54 | -8.615850e-47 |
| Msa0131810 | Msa1376310 | 0.826431 | 2.722525e-54 | -8.615850e-47 |
| Msa0131810 | Msa1381800 | 0.822482 | 2.313910e-53 | -8.615850e-47 |
| Msa0131810 | Msa1385570 | 0.825514 | 4.498229e-54 | -8.615850e-47 |
| Msa0131810 | Msa1389820 | 0.842828 | 2.036717e-58 | -8.615850e-47 |
| Msa0131810 | Msa1393560 | 0.827537 | 1.480948e-54 | -8.615850e-47 |
| Msa0131810 | Msa1399190 | 0.810957 | 8.902412e-51 | -8.615850e-47 |
| Msa0131810 | Msa1402010 | 0.914734 | 1.354342e-84 | -8.615850e-47 |
| Msa0131810 | Msa1406720 | 0.805622 | 1.221362e-49 | -8.615850e-47 |
| Msa0131810 | Msa1420830 | 0.804962 | 1.679381e-49 | -8.615850e-47 |
| Msa0131810 | Msa1426320 | 0.841106 | 5.811326e-58 | -8.615850e-47 |
| Msa0131810 | Msa1432520 | 0.800917 | 1.150589e-48 | -8.615850e-47 |
| Msa0131810 | Msa1439920 | 0.802600 | 5.195913e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131810 | MtrunA17_Chr1g0192661 | 99.292 | 424 | 2 | 1 | 27 | 450 | 1 | 423 | 0.0 | 844 |
| Msa0131810 | MtrunA17_Chr7g0249551 | 63.897 | 349 | 124 | 1 | 36 | 382 | 9 | 357 | 3.20e-171 | 487 |
| Msa0131810 | MtrunA17_Chr4g0033731 | 61.538 | 351 | 135 | 0 | 27 | 377 | 1 | 351 | 4.11e-166 | 474 |
| Msa0131810 | MtrunA17_Chr8g0385501 | 38.795 | 415 | 185 | 14 | 27 | 379 | 1 | 408 | 2.70e-62 | 211 |
| Msa0131810 | MtrunA17_Chr3g0131441 | 36.408 | 412 | 196 | 14 | 27 | 379 | 1 | 405 | 5.93e-60 | 204 |
| Msa0131810 | MtrunA17_Chr3g0130481 | 87.755 | 49 | 4 | 2 | 402 | 450 | 30 | 76 | 1.48e-15 | 71.6 |
| Msa0131810 | MtrunA17_Chr3g0130491 | 85.294 | 34 | 5 | 0 | 350 | 383 | 16 | 49 | 1.68e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131810 | AT1G09210.1 | 79.952 | 419 | 82 | 2 | 34 | 450 | 6 | 424 | 0.0 | 623 |
| Msa0131810 | AT1G56340.2 | 84.958 | 359 | 54 | 0 | 33 | 391 | 5 | 363 | 0.0 | 620 |
| Msa0131810 | AT1G56340.1 | 84.533 | 375 | 58 | 0 | 33 | 407 | 5 | 379 | 0.0 | 618 |
| Msa0131810 | AT1G08450.1 | 58.197 | 366 | 153 | 0 | 36 | 401 | 14 | 379 | 3.73e-165 | 472 |
| Msa0131810 | AT1G08450.3 | 52.732 | 366 | 148 | 1 | 36 | 401 | 14 | 354 | 2.04e-143 | 416 |
| Msa0131810 | AT1G08450.2 | 43.243 | 370 | 148 | 3 | 36 | 401 | 14 | 325 | 2.97e-104 | 315 |
| Msa0131810 | AT5G61790.1 | 38.384 | 396 | 185 | 12 | 36 | 379 | 13 | 401 | 1.30e-71 | 235 |
| Msa0131810 | AT5G07340.1 | 37.046 | 413 | 191 | 14 | 45 | 402 | 22 | 420 | 4.64e-57 | 197 |
| Msa0131810 | AT5G07340.2 | 37.592 | 407 | 184 | 15 | 51 | 402 | 37 | 428 | 7.18e-57 | 197 |
Find 151 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCTGGCTTCTTGTCTTC+AGG | 0.169701 | 1_3:+62771109 | None:intergenic |
| TTCCATGGTCCCTTGTACTC+TGG | 0.182700 | 1_3:+62770814 | None:intergenic |
| GTTCATGCTTGACAGAAAAT+TGG | 0.241397 | 1_3:+62771720 | None:intergenic |
| GCTACTTTAAGCTAATTCTT+TGG | 0.257839 | 1_3:+62769524 | None:intergenic |
| TTATCCTTGTTGCTGAATTC+AGG | 0.265305 | 1_3:+62771755 | None:intergenic |
| ATGTACGTCGTCCTCTTTAT+TGG | 0.266525 | 1_3:+62769928 | None:intergenic |
| TTCCACTTTCCACTGTAGTT+GGG | 0.290555 | 1_3:+62770684 | None:intergenic |
| TCAGGATCAGCAACCTCTTT+AGG | 0.312415 | 1_3:+62770982 | None:intergenic |
| TTCCATTGCAATGGCGATTA+GGG | 0.314157 | 1_3:-62773040 | Msa0131810:CDS |
| AGAACGAGAGAGAGAAGGTT+AGG | 0.314409 | 1_3:+62773009 | None:intergenic |
| CTTCCACTTTCCACTGTAGT+TGG | 0.316605 | 1_3:+62770683 | None:intergenic |
| GATGTTGATCAGAAGAAATT+TGG | 0.323562 | 1_3:-62771653 | Msa0131810:CDS |
| GTTGCTAAGTCAGTTGAATT+AGG | 0.324855 | 1_3:-62769326 | Msa0131810:three_prime_UTR |
| CCTCTGGCTTCTTGTCTTCA+GGG | 0.335164 | 1_3:+62771110 | None:intergenic |
| ATTCCATTGCAATGGCGATT+AGG | 0.335328 | 1_3:-62773041 | Msa0131810:CDS |
| CTACTTTAAGCTAATTCTTT+GGG | 0.344293 | 1_3:+62769525 | None:intergenic |
| CAAGGACCCAGAGGCCAAAA+AGG | 0.346525 | 1_3:-62771265 | Msa0131810:intron |
| GGCTTCTTGTCTTCAGGGTC+AGG | 0.351167 | 1_3:+62771115 | None:intergenic |
| TCCTTATCATCCCAATCTTC+TGG | 0.358229 | 1_3:+62771145 | None:intergenic |
| GTACTGTAACCACAGATATC+TGG | 0.359127 | 1_3:+62771489 | None:intergenic |
| TGCTGATCCTGATGCCAAAA+AGG | 0.359945 | 1_3:-62770971 | Msa0131810:intron |
| TTTCAACGGTCTGCTTATCT+AGG | 0.361099 | 1_3:+62769707 | None:intergenic |
| TCCATGGTCCCTTGTACTCT+GGG | 0.365819 | 1_3:+62770815 | None:intergenic |
| TCGCAGAAGCGATGGATAGA+AGG | 0.367240 | 1_3:+62772980 | None:intergenic |
| AATCAGCTGAAACAGTCTAA+TGG | 0.374016 | 1_3:+62769650 | None:intergenic |
| TTAACTTTGCAGGTGAAATC+TGG | 0.376979 | 1_3:-62770400 | Msa0131810:intron |
| TTGTTTGCAGGATGAGCTCT+AGG | 0.388195 | 1_3:-62769826 | Msa0131810:intron |
| ATCAGCTGAAACAGTCTAAT+GGG | 0.397211 | 1_3:+62769651 | None:intergenic |
| TATATATTTACCAGACTTCA+AGG | 0.404034 | 1_3:-62770557 | Msa0131810:intron |
| AGCAACTTGCTTAGCATACT+CGG | 0.412572 | 1_3:+62770342 | None:intergenic |
| AATACTTACAGCCAGAAGAT+TGG | 0.416134 | 1_3:-62771156 | Msa0131810:intron |
| ACGATTTACAGATTCATAAT+CGG | 0.416157 | 1_3:+62769561 | None:intergenic |
| GAACATCCTTCTTGATTAAG+TGG | 0.416832 | 1_3:+62771427 | None:intergenic |
| ATGCCAACATACTTCAACTT+GGG | 0.437777 | 1_3:+62770511 | None:intergenic |
| ATACTTACAGCCAGAAGATT+GGG | 0.440491 | 1_3:-62771155 | Msa0131810:intron |
| TATCCTTGTTGCTGAATTCA+GGG | 0.448897 | 1_3:+62771756 | None:intergenic |
| ATAAAATCTGTAATCTTCAC+TGG | 0.449401 | 1_3:+62771796 | None:intergenic |
| AAACAAACCTTTGGCTTCCA+TGG | 0.453885 | 1_3:+62770799 | None:intergenic |
| AGAGTCATGGCTAACTTCAT+TGG | 0.454725 | 1_3:+62769994 | None:intergenic |
| GAACGAGAGAGAGAAGGTTA+GGG | 0.456719 | 1_3:+62773010 | None:intergenic |
| TAAGTGGTTTGTGTCATTGT+AGG | 0.461585 | 1_3:+62771443 | None:intergenic |
| GCCAGAAGATTGGGATGATA+AGG | 0.462026 | 1_3:-62771146 | Msa0131810:CDS |
| CATTGCCAACCCAGAGTACA+AGG | 0.463149 | 1_3:-62770824 | Msa0131810:CDS |
| TCCACTTTCCACTGTAGTTG+GGG | 0.465244 | 1_3:+62770685 | None:intergenic |
| CTGGTAGTCTTTACTCTGAC+TGG | 0.467326 | 1_3:-62771311 | Msa0131810:CDS |
| CGTTGATTCTGATGCGGAAG+AGG | 0.469655 | 1_3:-62770029 | Msa0131810:CDS |
| TACAACAGTAGCAAGTTAAG+AGG | 0.470157 | 1_3:-62769228 | Msa0131810:three_prime_UTR |
| TTGGGGAAAACATAGATGTC+AGG | 0.470534 | 1_3:+62770529 | None:intergenic |
| GATAATGTGGAGAAGCAAAC+TGG | 0.475988 | 1_3:-62771330 | Msa0131810:CDS |
| AGAAACATGGGGCAAGCAAA+AGG | 0.486201 | 1_3:-62770317 | Msa0131810:CDS |
| AGAAGGATGAGAACTTGGCC+GGG | 0.487362 | 1_3:-62771987 | Msa0131810:CDS |
| ATGAGAACTTGGCCGGGGAG+TGG | 0.492077 | 1_3:-62771981 | Msa0131810:CDS |
| AAAATGCTGTAGGTTGCATC+AGG | 0.493543 | 1_3:+62771357 | None:intergenic |
| CGCAGAAGCGATGGATAGAA+GGG | 0.494372 | 1_3:+62772981 | None:intergenic |
| TCCTCATCATCCCAGTCCTC+AGG | 0.495577 | 1_3:+62770871 | None:intergenic |
| TTCCCCAAGTTGAAGTATGT+TGG | 0.497182 | 1_3:-62770514 | Msa0131810:CDS |
| CTTGTACTCTGGGTTGGCAA+TGG | 0.498402 | 1_3:+62770825 | None:intergenic |
| TAGGGAGTTTGCAAAGCATA+TGG | 0.499383 | 1_3:-62769807 | Msa0131810:three_prime_UTR |
| GAAAACCTTCGCAGAAGCGA+TGG | 0.502839 | 1_3:+62772972 | None:intergenic |
| AGCAAGTTGCTGAAGAAACA+TGG | 0.506018 | 1_3:-62770330 | Msa0131810:CDS |
| TATGTTCTTGCAGGCTGAGA+AGG | 0.508527 | 1_3:-62770215 | Msa0131810:intron |
| TTCTTCGAAGAGCGCTTCGA+AGG | 0.509596 | 1_3:-62772952 | Msa0131810:intron |
| TTCTGATGCGGAAGAGGATG+AGG | 0.510129 | 1_3:-62770023 | Msa0131810:CDS |
| ATGGAAGAAGGATGAGAACT+TGG | 0.515979 | 1_3:-62771992 | Msa0131810:CDS |
| TCTATCCATCGCTTCTGCGA+AGG | 0.516389 | 1_3:-62772977 | Msa0131810:CDS |
| AAGAAGGATGAGAACTTGGC+CGG | 0.516801 | 1_3:-62771988 | Msa0131810:CDS |
| AATGCCAACATACTTCAACT+TGG | 0.516939 | 1_3:+62770510 | None:intergenic |
| GGAACTACACCTCTGGTCAA+TGG | 0.518922 | 1_3:-62771960 | Msa0131810:CDS |
| CTCTTCCGCATCAGAATCAA+CGG | 0.521513 | 1_3:+62770030 | None:intergenic |
| TTCAGGGAACTCAGCAGAGA+TGG | 0.522780 | 1_3:+62771772 | None:intergenic |
| GGTAAAATCTGAATGGAAGA+AGG | 0.524814 | 1_3:-62772004 | Msa0131810:CDS |
| TGGTCCCTTGTACTCTGGGT+TGG | 0.525060 | 1_3:+62770819 | None:intergenic |
| AAACCTGGGTTGTCAATCAA+TGG | 0.532475 | 1_3:+62770657 | None:intergenic |
| ATTGGGTGAGTGCCACGTAC+GGG | 0.532537 | 1_3:+62773238 | None:intergenic |
| TGTTGTGTAGCCTGAGGACT+GGG | 0.537049 | 1_3:-62770881 | Msa0131810:intron |
| CATTGGGTGAGTGCCACGTA+CGG | 0.539643 | 1_3:+62773237 | None:intergenic |
| AACCCTAATCGCCATTGCAA+TGG | 0.540276 | 1_3:+62773038 | None:intergenic |
| TGTGGCAGATTGTGGCCATT+GGG | 0.544843 | 1_3:+62773221 | None:intergenic |
| TCTTCCGCATCAGAATCAAC+GGG | 0.545764 | 1_3:+62770031 | None:intergenic |
| CACAAACCACTTAATCAAGA+AGG | 0.545807 | 1_3:-62771433 | Msa0131810:CDS |
| GGGGAGTGGAACTACACCTC+TGG | 0.546989 | 1_3:-62771967 | Msa0131810:CDS |
| ATGTGGCAGATTGTGGCCAT+TGG | 0.547859 | 1_3:+62773220 | None:intergenic |
| AAAGATATAACTTCCGACTC+CGG | 0.549667 | 1_3:+62769756 | None:intergenic |
| GCAACTTGCTTAGCATACTC+GGG | 0.550973 | 1_3:+62770343 | None:intergenic |
| GAATTAGCTTAAAGTAGCTA+TGG | 0.551620 | 1_3:-62769519 | Msa0131810:three_prime_UTR |
| CTAAAGATGGATGGGAAAGC+CGG | 0.553813 | 1_3:-62772029 | Msa0131810:intron |
| GCCGGTGGGTAAAATCTGAA+TGG | 0.553831 | 1_3:-62772011 | Msa0131810:CDS |
| TGTTTGCAGGATGAGCTCTA+GGG | 0.555016 | 1_3:-62769825 | Msa0131810:intron |
| TGTTGAATGCTAAAGATGGA+TGG | 0.555665 | 1_3:-62772038 | Msa0131810:intron |
| ACCCCAACTACAGTGGAAAG+TGG | 0.558201 | 1_3:-62770686 | Msa0131810:CDS |
| ATTATCAATCAAAATGCTGT+AGG | 0.565497 | 1_3:+62771347 | None:intergenic |
| TTGTTGTGTAGCCTGAGGAC+TGG | 0.566755 | 1_3:-62770882 | Msa0131810:intron |
| ACGTACGGGAAGATTGTCAT+TGG | 0.566797 | 1_3:+62773252 | None:intergenic |
| CAGCGATGAAACCAATAAAG+AGG | 0.572191 | 1_3:-62769939 | Msa0131810:CDS |
| CTTAGCATACTCGGGATCAT+CGG | 0.572247 | 1_3:+62770351 | None:intergenic |
| AGAAAAGAACGAGAGAGAGA+AGG | 0.573982 | 1_3:+62773004 | None:intergenic |
| TGACTCTGATGATGAGTCAA+AGG | 0.575775 | 1_3:-62769978 | Msa0131810:CDS |
| ATACGATGACATTCCTAAAG+AGG | 0.576967 | 1_3:-62770995 | Msa0131810:CDS |
| GATATTATAAATCACCTGTA+GGG | 0.577404 | 1_3:+62771620 | None:intergenic |
| TCTCCCACCAAAGAAAATCA+AGG | 0.577520 | 1_3:-62771283 | Msa0131810:CDS |
| TTGGCGGTGATACTCCCTAC+AGG | 0.578535 | 1_3:-62771634 | Msa0131810:intron |
| GTTGAATGCTAAAGATGGAT+GGG | 0.579079 | 1_3:-62772037 | Msa0131810:intron |
| CAGAAACTTGACTGTGGTGG+TGG | 0.579680 | 1_3:-62771698 | Msa0131810:CDS |
| GTTGATCAGAAGAAATTTGG+CGG | 0.581881 | 1_3:-62771650 | Msa0131810:CDS |
| GGAATATTTCCAGCTAGCAA+TGG | 0.582398 | 1_3:-62769280 | Msa0131810:three_prime_UTR |
| AGAGGTGTAGTTCCACTCCC+CGG | 0.582515 | 1_3:+62771969 | None:intergenic |
| AACTCATTGTCAGGAAACAA+AGG | 0.583402 | 1_3:-62770059 | Msa0131810:intron |
| AGCTGAGAAGAAGAAAGAAG+AGG | 0.584374 | 1_3:-62770179 | Msa0131810:CDS |
| GGTTACATGAAGTTGCTTAG+CGG | 0.587170 | 1_3:-62771677 | Msa0131810:CDS |
| GCAAGTTGCTGAAGAAACAT+GGG | 0.587236 | 1_3:-62770329 | Msa0131810:CDS |
| TGCTGTAGGTTGCATCAGGA+CGG | 0.587388 | 1_3:+62771361 | None:intergenic |
| GATGAGTCAAAGGCAGAAGC+TGG | 0.589511 | 1_3:-62769968 | Msa0131810:CDS |
| GACTGGGATGATGAGGAAGA+TGG | 0.589626 | 1_3:-62770865 | Msa0131810:CDS |
| AGCGAGCGATTCCATTGCAA+TGG | 0.589635 | 1_3:-62773049 | Msa0131810:CDS |
| TGTTGGCATTGAATTGTGGC+AGG | 0.591537 | 1_3:-62770497 | Msa0131810:intron |
| GAAGGATGAGAACTTGGCCG+GGG | 0.593588 | 1_3:-62771986 | Msa0131810:CDS |
| GGACAATATGTGGCAGATTG+TGG | 0.594348 | 1_3:+62773213 | None:intergenic |
| TTGACTCATCATCAGAGTCA+TGG | 0.601599 | 1_3:+62769981 | None:intergenic |
| TACTCTGGGTTGGCAATGGT+AGG | 0.604644 | 1_3:+62770829 | None:intergenic |
| TACACCTCTGGTCAATGGAA+TGG | 0.606107 | 1_3:-62771955 | Msa0131810:CDS |
| CGTACGTGGCACTCACCCAA+TGG | 0.606462 | 1_3:-62773236 | Msa0131810:CDS |
| TGCCAACATACTTCAACTTG+GGG | 0.607807 | 1_3:+62770512 | None:intergenic |
| AAGATGGATGGGAAAGCCGG+TGG | 0.610833 | 1_3:-62772026 | Msa0131810:CDS |
| TTGCTTACGTGGACAATATG+TGG | 0.610903 | 1_3:+62773203 | None:intergenic |
| TGCAAAGCATATGGCATATG+CGG | 0.612393 | 1_3:-62769798 | Msa0131810:three_prime_UTR |
| TGAGAAGAAGAAAGAAGAGG+AGG | 0.621039 | 1_3:-62770176 | Msa0131810:intron |
| GCCTGAGGACTGGGATGATG+AGG | 0.621427 | 1_3:-62770872 | Msa0131810:CDS |
| CAACTACAGTGGAAAGTGGA+AGG | 0.622242 | 1_3:-62770682 | Msa0131810:CDS |
| TGGGGAAAACATAGATGTCA+GGG | 0.628802 | 1_3:+62770530 | None:intergenic |
| ATGTGTAAACATGAGTAAGC+TGG | 0.631281 | 1_3:+62771391 | None:intergenic |
| ATCAAGAACCCCAACTACAG+TGG | 0.637028 | 1_3:-62770693 | Msa0131810:CDS |
| ACCCAGAGTACAAGGGACCA+TGG | 0.641246 | 1_3:-62770816 | Msa0131810:CDS |
| GTAAGCTGGTCAGTCTCACA+AGG | 0.646980 | 1_3:+62771405 | None:intergenic |
| AGTATGTTGGCATTGAATTG+TGG | 0.647006 | 1_3:-62770501 | Msa0131810:CDS |
| ATGATGAGGAAGATGGTGAG+TGG | 0.647034 | 1_3:-62770858 | Msa0131810:CDS |
| AATGGTGACGCTAATGACAA+AGG | 0.650029 | 1_3:-62771937 | Msa0131810:intron |
| ATGTTTGGTCCAGATATCTG+TGG | 0.653875 | 1_3:-62771498 | Msa0131810:CDS |
| AATGACAATCTTCCCGTACG+TGG | 0.655653 | 1_3:-62773250 | Msa0131810:CDS |
| CAAGGGACCATGGAAGCCAA+AGG | 0.658097 | 1_3:-62770806 | Msa0131810:intron |
| TAATTCAACTGACTTAGCAA+CGG | 0.662594 | 1_3:+62769328 | None:intergenic |
| TGATCCCGTTGATTCTGATG+CGG | 0.665412 | 1_3:-62770035 | Msa0131810:CDS |
| GCACCATTGATTGACAACCC+AGG | 0.669589 | 1_3:-62770660 | Msa0131810:intron |
| AAAGAAAATCAAGGACCCAG+AGG | 0.673165 | 1_3:-62771274 | Msa0131810:CDS |
| GTTCCCTGAATTCAGCAACA+AGG | 0.674436 | 1_3:-62771759 | Msa0131810:CDS |
| AGATGGATGGGAAAGCCGGT+GGG | 0.676998 | 1_3:-62772025 | Msa0131810:CDS |
| CCCTGAAGACAAGAAGCCAG+AGG | 0.683823 | 1_3:-62771110 | Msa0131810:intron |
| CAAGTTGCTGAAGAAACATG+GGG | 0.696192 | 1_3:-62770328 | Msa0131810:CDS |
| GTCACCATTCCATTGACCAG+AGG | 0.697163 | 1_3:+62771951 | None:intergenic |
| ATTGCCAACCCAGAGTACAA+GGG | 0.731176 | 1_3:-62770823 | Msa0131810:CDS |
| GAACAGAAACTTGACTGTGG+TGG | 0.776860 | 1_3:-62771701 | Msa0131810:CDS |
| CATGAACAGAAACTTGACTG+TGG | 0.796573 | 1_3:-62771704 | Msa0131810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATATTTGATTTTTTCAA+AGG | - | chr1_3:62773171-62773190 | Msa0131810:intron | 15.0% |
| !! | ATGAAATGAAAAAAGAGATA+TGG | + | chr1_3:62769560-62769579 | None:intergenic | 20.0% |
| !! | ACATTCATGTTTGTAATTTA+TGG | - | chr1_3:62769612-62769631 | Msa0131810:three_prime_UTR | 20.0% |
| !! | AATTTGCAGTGATAATATTA+TGG | + | chr1_3:62770270-62770289 | None:intergenic | 20.0% |
| !! | ATGATTAGAAATTAGAAAGT+AGG | + | chr1_3:62771290-62771309 | None:intergenic | 20.0% |
| !! | ATAATATAATGAGAGATGAA+TGG | + | chr1_3:62771550-62771569 | None:intergenic | 20.0% |
| !! | ATTCATCTCTCATTATATTA+TGG | - | chr1_3:62771549-62771568 | Msa0131810:intron | 20.0% |
| !! | TGATATATTGCAATATGTTT+AGG | - | chr1_3:62771712-62771731 | Msa0131810:CDS | 20.0% |
| !!! | TTGATTTGTTTACTAACTTT+TGG | - | chr1_3:62771737-62771756 | Msa0131810:CDS | 20.0% |
| ! | TGAAAAAAGAGATATGGAAA+TGG | + | chr1_3:62769554-62769573 | None:intergenic | 25.0% |
| !! | TGTGATTGAATTTTCATGAT+CGG | - | chr1_3:62769677-62769696 | Msa0131810:three_prime_UTR | 25.0% |
| ! | GGTTAATTAATCTTTGATCA+TGG | - | chr1_3:62769843-62769862 | Msa0131810:intron | 25.0% |
| ! | GGATTGTAAACAAAATGAAA+TGG | + | chr1_3:62769915-62769934 | None:intergenic | 25.0% |
| !! | CAATCCTTTTAATCTCATTT+CGG | - | chr1_3:62769929-62769948 | Msa0131810:CDS | 25.0% |
| ! | AAAACTAGCATTCTTTAATC+CGG | + | chr1_3:62769988-62770007 | None:intergenic | 25.0% |
| ! | AATTTGATCTAATCCAAACA+AGG | - | chr1_3:62770244-62770263 | Msa0131810:intron | 25.0% |
| ! | ATACTAAATAAACTCGAACA+TGG | + | chr1_3:62770339-62770358 | None:intergenic | 25.0% |
| ! | TCAAAACACAAGTTAGAAAA+GGG | + | chr1_3:62770407-62770426 | None:intergenic | 25.0% |
| ! | ATCAAAACACAAGTTAGAAA+AGG | + | chr1_3:62770408-62770427 | None:intergenic | 25.0% |
| ! | ATTATGTTGAATGCTAAAGA+TGG | - | chr1_3:62770430-62770449 | Msa0131810:intron | 25.0% |
| ! | ATAAAATCTGTAATCTTCAC+TGG | + | chr1_3:62770679-62770698 | None:intergenic | 25.0% |
| ! | GATATTATAAATCACCTGTA+GGG | + | chr1_3:62770855-62770874 | None:intergenic | 25.0% |
| ! | TGAAAGAGATAAAACTAGAA+GGG | + | chr1_3:62770877-62770896 | None:intergenic | 25.0% |
| !! | TAATTTTGCAGTATCATGTT+TGG | - | chr1_3:62770959-62770978 | Msa0131810:intron | 25.0% |
| ! | ATTATCAATCAAAATGCTGT+AGG | + | chr1_3:62771128-62771147 | None:intergenic | 25.0% |
| ! | TACATAAAACAAAAGGAATC+TGG | + | chr1_3:62771265-62771284 | None:intergenic | 25.0% |
| ! | GTAGGAATACATAAAACAAA+AGG | + | chr1_3:62771272-62771291 | None:intergenic | 25.0% |
| ! | ATACAAAAGCTTAGAGTAAA+AGG | + | chr1_3:62771393-62771412 | None:intergenic | 25.0% |
| ! | TATCTAATACACAACATAGT+AGG | + | chr1_3:62771429-62771448 | None:intergenic | 25.0% |
| ! | TATATATTTACCAGACTTCA+AGG | - | chr1_3:62771915-62771934 | Msa0131810:intron | 25.0% |
| !! | TTTCTATTCACTCAATCTTT+TGG | - | chr1_3:62772189-62772208 | Msa0131810:intron | 25.0% |
| !!! | CCATTAAGTTTTATTCCTTA+AGG | + | chr1_3:62772215-62772234 | None:intergenic | 25.0% |
| ! | CCTTAAGGAATAAAACTTAA+TGG | - | chr1_3:62772212-62772231 | Msa0131810:intron | 25.0% |
| ! | ACGATTTACAGATTCATAAT+CGG | + | chr1_3:62772914-62772933 | None:intergenic | 25.0% |
| ! | CTACTTTAAGCTAATTCTTT+GGG | + | chr1_3:62772950-62772969 | None:intergenic | 25.0% |
| ! | TGTTTGGTTAAATCATAACA+TGG | + | chr1_3:62773055-62773074 | None:intergenic | 25.0% |
| ! | GTTATGATTTAACCAAACAA+CGG | - | chr1_3:62773056-62773075 | Msa0131810:intron | 25.0% |
| ! | TGTTTGCTTAAATCATAACA+TGG | + | chr1_3:62773106-62773125 | None:intergenic | 25.0% |
| ! | GGTAAATTTGGTAATTTACG+TGG | + | chr1_3:62769298-62769317 | None:intergenic | 30.0% |
| AATTACACAACAATGCACAA+AGG | + | chr1_3:62769650-62769669 | None:intergenic | 30.0% | |
| !! | ATGTTGGTTTGAAAACGATT+TGG | - | chr1_3:62769809-62769828 | Msa0131810:exon | 30.0% |
| TCTTCCGAAATGAGATTAAA+AGG | + | chr1_3:62769936-62769955 | None:intergenic | 30.0% | |
| ACAATCAGTTCATTAAAAGC+TGG | + | chr1_3:62770088-62770107 | None:intergenic | 30.0% | |
| !! | GATAATATTATGGCCTTGTT+TGG | + | chr1_3:62770260-62770279 | None:intergenic | 30.0% |
| !!! | TTTCTTTCCTTTTTTCGTTG+AGG | - | chr1_3:62770308-62770327 | Msa0131810:intron | 30.0% |
| !! | AAGGGGAAAATATTGATTTG+AGG | + | chr1_3:62770389-62770408 | None:intergenic | 30.0% |
| CAAAACACAAGTTAGAAAAG+GGG | + | chr1_3:62770406-62770425 | None:intergenic | 30.0% | |
| AAACCAGCAACAATAAAACA+AGG | + | chr1_3:62770586-62770605 | None:intergenic | 30.0% | |
| TGAATTGAAAGATGATACTG+AGG | - | chr1_3:62770612-62770631 | Msa0131810:intron | 30.0% | |
| GATGTTGATCAGAAGAAATT+TGG | - | chr1_3:62770819-62770838 | Msa0131810:CDS | 30.0% | |
| GGATATTATAAATCACCTGT+AGG | + | chr1_3:62770856-62770875 | None:intergenic | 30.0% | |
| GTGAAAGAGATAAAACTAGA+AGG | + | chr1_3:62770878-62770897 | None:intergenic | 30.0% | |
| !!! | CAGCATTTTGATTGATAATG+TGG | - | chr1_3:62771129-62771148 | Msa0131810:CDS | 30.0% |
| ACTATAAACGTAGGTGAAAA+GGG | + | chr1_3:62771235-62771254 | None:intergenic | 30.0% | |
| AACTATAAACGTAGGTGAAA+AGG | + | chr1_3:62771236-62771255 | None:intergenic | 30.0% | |
| GGCAATTAAACTATAAACGT+AGG | + | chr1_3:62771244-62771263 | None:intergenic | 30.0% | |
| TCTGACATTCTGTATTTGTA+GGG | - | chr1_3:62771454-62771473 | Msa0131810:CDS | 30.0% | |
| TAACTTCAACTGCAAAAACA+AGG | + | chr1_3:62771850-62771869 | None:intergenic | 30.0% | |
| ACTAAAATGCTCAAATCAAG+TGG | + | chr1_3:62772028-62772047 | None:intergenic | 30.0% | |
| ! | TTAATGGATGTTGATCTCTT+TGG | - | chr1_3:62772228-62772247 | Msa0131810:intron | 30.0% |
| !!! | AGTGAGCAAAAGTTTTATTC+CGG | - | chr1_3:62772697-62772716 | Msa0131810:intron | 30.0% |
| ! | AACAGACAACAATGTCTTTT+TGG | - | chr1_3:62772847-62772866 | Msa0131810:intron | 30.0% |
| ! | GCTACTTTAAGCTAATTCTT+TGG | + | chr1_3:62772951-62772970 | None:intergenic | 30.0% |
| ! | GAATTAGCTTAAAGTAGCTA+TGG | - | chr1_3:62772953-62772972 | Msa0131810:CDS | 30.0% |
| ! | ATGATTTTCTTTCCGTTGTT+TGG | + | chr1_3:62773071-62773090 | None:intergenic | 30.0% |
| ! | TAATTCAACTGACTTAGCAA+CGG | + | chr1_3:62773147-62773166 | None:intergenic | 30.0% |
| ! | ATTGTTTCTTTCAGTGCTGT+GGG | + | chr1_3:62769319-62769338 | None:intergenic | 35.0% |
| !!! | AACGATTTGGCACGTTTTTT+TGG | - | chr1_3:62769822-62769841 | Msa0131810:intron | 35.0% |
| TTTGAATTGTGTTGTGTGTC+CGG | - | chr1_3:62769966-62769985 | Msa0131810:CDS | 35.0% | |
| TTTGTCTCTGTTTGTGTGTA+AGG | - | chr1_3:62770031-62770050 | Msa0131810:CDS | 35.0% | |
| ATGCTATAAGCTGTGACTTA+CGG | + | chr1_3:62770216-62770235 | None:intergenic | 35.0% | |
| TGTTGAATGCTAAAGATGGA+TGG | - | chr1_3:62770434-62770453 | Msa0131810:intron | 35.0% | |
| GTTGAATGCTAAAGATGGAT+GGG | - | chr1_3:62770435-62770454 | Msa0131810:intron | 35.0% | |
| GGTAAAATCTGAATGGAAGA+AGG | - | chr1_3:62770468-62770487 | Msa0131810:intron | 35.0% | |
| !!! | CAACCTTGTTTTATTGTTGC+TGG | - | chr1_3:62770580-62770599 | Msa0131810:intron | 35.0% |
| TTGAAAGATGATACTGAGGT+TGG | - | chr1_3:62770616-62770635 | Msa0131810:intron | 35.0% | |
| CAAATGTTTGATATCTCCAC+AGG | - | chr1_3:62770645-62770664 | Msa0131810:intron | 35.0% | |
| TATCCTTGTTGCTGAATTCA+GGG | + | chr1_3:62770719-62770738 | None:intergenic | 35.0% | |
| TTATCCTTGTTGCTGAATTC+AGG | + | chr1_3:62770720-62770739 | None:intergenic | 35.0% | |
| GTTCATGCTTGACAGAAAAT+TGG | + | chr1_3:62770755-62770774 | None:intergenic | 35.0% | |
| GTTGATCAGAAGAAATTTGG+CGG | - | chr1_3:62770822-62770841 | Msa0131810:CDS | 35.0% | |
| !!! | CAGAATAGCGTGTACTTTTT+TGG | + | chr1_3:62771008-62771027 | None:intergenic | 35.0% |
| ! | TAAGTGGTTTGTGTCATTGT+AGG | + | chr1_3:62771032-62771051 | None:intergenic | 35.0% |
| CACAAACCACTTAATCAAGA+AGG | - | chr1_3:62771039-62771058 | Msa0131810:intron | 35.0% | |
| GAACATCCTTCTTGATTAAG+TGG | + | chr1_3:62771048-62771067 | None:intergenic | 35.0% | |
| ATGTGTAAACATGAGTAAGC+TGG | + | chr1_3:62771084-62771103 | None:intergenic | 35.0% | |
| AATACTTACAGCCAGAAGAT+TGG | - | chr1_3:62771316-62771335 | Msa0131810:CDS | 35.0% | |
| ATACTTACAGCCAGAAGATT+GGG | - | chr1_3:62771317-62771336 | Msa0131810:CDS | 35.0% | |
| !! | AGAGTAAAAGGTATTACCTC+TGG | + | chr1_3:62771381-62771400 | None:intergenic | 35.0% |
| CTAATACACAACATAGTAGG+TGG | + | chr1_3:62771426-62771445 | None:intergenic | 35.0% | |
| CTCTGACATTCTGTATTTGT+AGG | - | chr1_3:62771453-62771472 | Msa0131810:CDS | 35.0% | |
| ATACGATGACATTCCTAAAG+AGG | - | chr1_3:62771477-62771496 | Msa0131810:CDS | 35.0% | |
| ! | TGGGAAACAACTAACCTTTT+TGG | + | chr1_3:62771518-62771537 | None:intergenic | 35.0% |
| AATAATTGTTGTGTAGCCTG+AGG | - | chr1_3:62771585-62771604 | Msa0131810:intron | 35.0% | |
| TTTCCACACAAACAAACCTT+TGG | + | chr1_3:62771685-62771704 | None:intergenic | 35.0% | |
| !!! | TAACTTTTGGTGTTACGTCT+TGG | - | chr1_3:62771750-62771769 | Msa0131810:CDS | 35.0% |
| ATGCCAACATACTTCAACTT+GGG | + | chr1_3:62771964-62771983 | None:intergenic | 35.0% | |
| AATGCCAACATACTTCAACT+TGG | + | chr1_3:62771965-62771984 | None:intergenic | 35.0% | |
| ! | AGTATGTTGGCATTGAATTG+TGG | - | chr1_3:62771971-62771990 | Msa0131810:CDS | 35.0% |
| TTAACTTTGCAGGTGAAATC+TGG | - | chr1_3:62772072-62772091 | Msa0131810:intron | 35.0% | |
| TGGTGAATATATGTTCTTGC+AGG | - | chr1_3:62772248-62772267 | Msa0131810:intron | 35.0% | |
| AACTTCCTTAACTCATTGTC+AGG | - | chr1_3:62772404-62772423 | Msa0131810:intron | 35.0% | |
| TGTTTCCTGACAATGAGTTA+AGG | + | chr1_3:62772412-62772431 | None:intergenic | 35.0% | |
| AACTCATTGTCAGGAAACAA+AGG | - | chr1_3:62772413-62772432 | Msa0131810:intron | 35.0% | |
| !!! | CAAAAGTTTTATTCCGGAGT+CGG | - | chr1_3:62772703-62772722 | Msa0131810:intron | 35.0% |
| AAAGATATAACTTCCGACTC+CGG | + | chr1_3:62772719-62772738 | None:intergenic | 35.0% | |
| ! | TTTTCGCTTGCAGTTTTCAA+CGG | + | chr1_3:62772782-62772801 | None:intergenic | 35.0% |
| ATCAGCTGAAACAGTCTAAT+GGG | + | chr1_3:62772824-62772843 | None:intergenic | 35.0% | |
| AATCAGCTGAAACAGTCTAA+TGG | + | chr1_3:62772825-62772844 | None:intergenic | 35.0% | |
| GTTGCTAAGTCAGTTGAATT+AGG | - | chr1_3:62773146-62773165 | Msa0131810:intron | 35.0% | |
| TAGCAATGGATGAGAAAAAG+TGG | - | chr1_3:62773206-62773225 | Msa0131810:intron | 35.0% | |
| TACAACAGTAGCAAGTTAAG+AGG | - | chr1_3:62773244-62773263 | Msa0131810:CDS | 35.0% | |
| TTGCTTACGTGGACAATATG+TGG | + | chr1_3:62769272-62769291 | None:intergenic | 40.0% | |
| TTCAGTGCTGTGGGTAAATT+TGG | + | chr1_3:62769310-62769329 | None:intergenic | 40.0% | |
| ! | CATTGTTTCTTTCAGTGCTG+TGG | + | chr1_3:62769320-62769339 | None:intergenic | 40.0% |
| AATGAGAGTGAGAGCTACTT+TGG | + | chr1_3:62769385-62769404 | None:intergenic | 40.0% | |
| ATTCCATTGCAATGGCGATT+AGG | - | chr1_3:62769431-62769450 | Msa0131810:intron | 40.0% | |
| TTCCATTGCAATGGCGATTA+GGG | - | chr1_3:62769432-62769451 | Msa0131810:intron | 40.0% | |
| AGAAAAGAACGAGAGAGAGA+AGG | + | chr1_3:62769471-62769490 | None:intergenic | 40.0% | |
| CAAACCAACATCATCACGTT+CGG | + | chr1_3:62769800-62769819 | None:intergenic | 40.0% | |
| GGACTATCCTCAACGAAAAA+AGG | + | chr1_3:62770318-62770337 | None:intergenic | 40.0% | |
| ! | TCCATTCAGATTTTACCCAC+CGG | + | chr1_3:62770465-62770484 | None:intergenic | 40.0% |
| ATGGAAGAAGGATGAGAACT+TGG | - | chr1_3:62770480-62770499 | Msa0131810:intron | 40.0% | |
| ! | AATGGTGACGCTAATGACAA+AGG | - | chr1_3:62770535-62770554 | Msa0131810:CDS | 40.0% |
| !! | TTCACTGGTTTGAATACCTG+TGG | + | chr1_3:62770664-62770683 | None:intergenic | 40.0% |
| CATGAACAGAAACTTGACTG+TGG | - | chr1_3:62770768-62770787 | Msa0131810:intron | 40.0% | |
| GGTTACATGAAGTTGCTTAG+CGG | - | chr1_3:62770795-62770814 | Msa0131810:intron | 40.0% | |
| AGCTAACATGTGTCATGTCT+TGG | - | chr1_3:62770898-62770917 | Msa0131810:intron | 40.0% | |
| ATGTTTGGTCCAGATATCTG+TGG | - | chr1_3:62770974-62770993 | Msa0131810:CDS | 40.0% | |
| GTACTGTAACCACAGATATC+TGG | + | chr1_3:62770986-62771005 | None:intergenic | 40.0% | |
| AAAATGCTGTAGGTTGCATC+AGG | + | chr1_3:62771118-62771137 | None:intergenic | 40.0% | |
| GATAATGTGGAGAAGCAAAC+TGG | - | chr1_3:62771142-62771161 | Msa0131810:CDS | 40.0% | |
| TCTCCCACCAAAGAAAATCA+AGG | - | chr1_3:62771189-62771208 | Msa0131810:intron | 40.0% | |
| ! | GGTCCTTGATTTTCTTTGGT+GGG | + | chr1_3:62771195-62771214 | None:intergenic | 40.0% |
| ! | TCTGGGTCCTTGATTTTCTT+TGG | + | chr1_3:62771199-62771218 | None:intergenic | 40.0% |
| AAAGAAAATCAAGGACCCAG+AGG | - | chr1_3:62771198-62771217 | Msa0131810:intron | 40.0% | |
| !!! | AGGTGAAAAGGGTACCTTTT+TGG | + | chr1_3:62771224-62771243 | None:intergenic | 40.0% |
| TCCTTATCATCCCAATCTTC+TGG | + | chr1_3:62771330-62771349 | None:intergenic | 40.0% | |
| !! | CAACTAACCTTTTTGGCATC+AGG | + | chr1_3:62771511-62771530 | None:intergenic | 40.0% |
| AGATGAATGGACACAGCAAT+GGG | + | chr1_3:62771537-62771556 | None:intergenic | 40.0% | |
| ! | AAACAAACCTTTGGCTTCCA+TGG | + | chr1_3:62771676-62771695 | None:intergenic | 40.0% |
| ! | AAGCCAAAGGTTTGTTTGTG+TGG | - | chr1_3:62771679-62771698 | Msa0131810:CDS | 40.0% |
| TTCCACTTTCCACTGTAGTT+GGG | + | chr1_3:62771791-62771810 | None:intergenic | 40.0% | |
| AAACCTGGGTTGTCAATCAA+TGG | + | chr1_3:62771818-62771837 | None:intergenic | 40.0% | |
| CAAGGATGAAAAGCAAACCT+GGG | + | chr1_3:62771832-62771851 | None:intergenic | 40.0% | |
| ACAAGGATGAAAAGCAAACC+TGG | + | chr1_3:62771833-62771852 | None:intergenic | 40.0% | |
| TGGGGAAAACATAGATGTCA+GGG | + | chr1_3:62771945-62771964 | None:intergenic | 40.0% | |
| TTGGGGAAAACATAGATGTC+AGG | + | chr1_3:62771946-62771965 | None:intergenic | 40.0% | |
| ! | TTCCCCAAGTTGAAGTATGT+TGG | - | chr1_3:62771958-62771977 | Msa0131810:CDS | 40.0% |
| TGCCAACATACTTCAACTTG+GGG | + | chr1_3:62771963-62771982 | None:intergenic | 40.0% | |
| ! | TGCAAAGTTAAGTAGCTTGC+TGG | + | chr1_3:62772063-62772082 | None:intergenic | 40.0% |
| AGCAAGCTACTTAACTTTGC+AGG | - | chr1_3:62772062-62772081 | Msa0131810:intron | 40.0% | |
| ! | AGCAACTTGCTTAGCATACT+CGG | + | chr1_3:62772133-62772152 | None:intergenic | 40.0% |
| AGCAAGTTGCTGAAGAAACA+TGG | - | chr1_3:62772142-62772161 | Msa0131810:intron | 40.0% | |
| GCAAGTTGCTGAAGAAACAT+GGG | - | chr1_3:62772143-62772162 | Msa0131810:intron | 40.0% | |
| CAAGTTGCTGAAGAAACATG+GGG | - | chr1_3:62772144-62772163 | Msa0131810:intron | 40.0% | |
| !!! | CACTCAATCTTTTGGCCTTA+AGG | - | chr1_3:62772197-62772216 | Msa0131810:intron | 40.0% |
| AGCTGAGAAGAAGAAAGAAG+AGG | - | chr1_3:62772293-62772312 | Msa0131810:intron | 40.0% | |
| TGAGAAGAAGAAAGAAGAGG+AGG | - | chr1_3:62772296-62772315 | Msa0131810:intron | 40.0% | |
| AGAGTCATGGCTAACTTCAT+TGG | + | chr1_3:62772481-62772500 | None:intergenic | 40.0% | |
| TTGACTCATCATCAGAGTCA+TGG | + | chr1_3:62772494-62772513 | None:intergenic | 40.0% | |
| ! | TGACTCTGATGATGAGTCAA+AGG | - | chr1_3:62772494-62772513 | Msa0131810:intron | 40.0% |
| CAGCGATGAAACCAATAAAG+AGG | - | chr1_3:62772533-62772552 | Msa0131810:intron | 40.0% | |
| ATGTACGTCGTCCTCTTTAT+TGG | + | chr1_3:62772547-62772566 | None:intergenic | 40.0% | |
| TCATCCTGCAAACAAAAGGA+GGG | + | chr1_3:62772641-62772660 | None:intergenic | 40.0% | |
| TAGGGAGTTTGCAAAGCATA+TGG | - | chr1_3:62772665-62772684 | Msa0131810:intron | 40.0% | |
| TGCAAAGCATATGGCATATG+CGG | - | chr1_3:62772674-62772693 | Msa0131810:intron | 40.0% | |
| TTTCAACGGTCTGCTTATCT+AGG | + | chr1_3:62772768-62772787 | None:intergenic | 40.0% | |
| GGAATATTTCCAGCTAGCAA+TGG | - | chr1_3:62773192-62773211 | Msa0131810:intron | 40.0% | |
| ! | TTTTCTCATCCATTGCTAGC+TGG | + | chr1_3:62773204-62773223 | None:intergenic | 40.0% |
| GGACAATATGTGGCAGATTG+TGG | + | chr1_3:62769262-62769281 | None:intergenic | 45.0% | |
| ! | TTACGTGGATGTTGCTTACG+TGG | + | chr1_3:62769283-62769302 | None:intergenic | 45.0% |
| AACCCTAATCGCCATTGCAA+TGG | + | chr1_3:62769437-62769456 | None:intergenic | 45.0% | |
| GAACGAGAGAGAGAAGGTTA+GGG | + | chr1_3:62769465-62769484 | None:intergenic | 45.0% | |
| AGAACGAGAGAGAGAAGGTT+AGG | + | chr1_3:62769466-62769485 | None:intergenic | 45.0% | |
| TGATCTGAACTGTCGTTGTC+TGG | - | chr1_3:62769752-62769771 | Msa0131810:three_prime_UTR | 45.0% | |
| TAAGCACCTGTGAGACTCTA+TGG | - | chr1_3:62770137-62770156 | Msa0131810:intron | 45.0% | |
| GTTCTTCCATAGAGTCTCAC+AGG | + | chr1_3:62770146-62770165 | None:intergenic | 45.0% | |
| CTAAAGATGGATGGGAAAGC+CGG | - | chr1_3:62770443-62770462 | Msa0131810:intron | 45.0% | |
| AAGAAGGATGAGAACTTGGC+CGG | - | chr1_3:62770484-62770503 | Msa0131810:intron | 45.0% | |
| TACACCTCTGGTCAATGGAA+TGG | - | chr1_3:62770517-62770536 | Msa0131810:CDS | 45.0% | |
| GTTCCCTGAATTCAGCAACA+AGG | - | chr1_3:62770713-62770732 | Msa0131810:intron | 45.0% | |
| GAACAGAAACTTGACTGTGG+TGG | - | chr1_3:62770771-62770790 | Msa0131810:intron | 45.0% | |
| CTGGTAGTCTTTACTCTGAC+TGG | - | chr1_3:62771161-62771180 | Msa0131810:intron | 45.0% | |
| ! | GGGTCCTTGATTTTCTTTGG+TGG | + | chr1_3:62771196-62771215 | None:intergenic | 45.0% |
| GCCAGAAGATTGGGATGATA+AGG | - | chr1_3:62771326-62771345 | Msa0131810:CDS | 45.0% | |
| TCAGGATCAGCAACCTCTTT+AGG | + | chr1_3:62771493-62771512 | None:intergenic | 45.0% | |
| TGCTGATCCTGATGCCAAAA+AGG | - | chr1_3:62771501-62771520 | Msa0131810:CDS | 45.0% | |
| GAGATGAATGGACACAGCAA+TGG | + | chr1_3:62771538-62771557 | None:intergenic | 45.0% | |
| ATGATGAGGAAGATGGTGAG+TGG | - | chr1_3:62771614-62771633 | Msa0131810:intron | 45.0% | |
| ATTGCCAACCCAGAGTACAA+GGG | - | chr1_3:62771649-62771668 | Msa0131810:CDS | 45.0% | |
| ATCAAGAACCCCAACTACAG+TGG | - | chr1_3:62771779-62771798 | Msa0131810:CDS | 45.0% | |
| TCCACTTTCCACTGTAGTTG+GGG | + | chr1_3:62771790-62771809 | None:intergenic | 45.0% | |
| CTTCCACTTTCCACTGTAGT+TGG | + | chr1_3:62771792-62771811 | None:intergenic | 45.0% | |
| CAACTACAGTGGAAAGTGGA+AGG | - | chr1_3:62771790-62771809 | Msa0131810:CDS | 45.0% | |
| ! | TGTTGGCATTGAATTGTGGC+AGG | - | chr1_3:62771975-62771994 | Msa0131810:CDS | 45.0% |
| CTTAGCATACTCGGGATCAT+CGG | + | chr1_3:62772124-62772143 | None:intergenic | 45.0% | |
| ! | GCAACTTGCTTAGCATACTC+GGG | + | chr1_3:62772132-62772151 | None:intergenic | 45.0% |
| AGAAACATGGGGCAAGCAAA+AGG | - | chr1_3:62772155-62772174 | Msa0131810:intron | 45.0% | |
| TATGTTCTTGCAGGCTGAGA+AGG | - | chr1_3:62772257-62772276 | Msa0131810:intron | 45.0% | |
| !! | TGATCCCGTTGATTCTGATG+CGG | - | chr1_3:62772437-62772456 | Msa0131810:intron | 45.0% |
| TCTTCCGCATCAGAATCAAC+GGG | + | chr1_3:62772444-62772463 | None:intergenic | 45.0% | |
| CTCTTCCGCATCAGAATCAA+CGG | + | chr1_3:62772445-62772464 | None:intergenic | 45.0% | |
| !! | TTTCCCCTCCTTTTGTTTGC+AGG | - | chr1_3:62772634-62772653 | Msa0131810:intron | 45.0% |
| CATCCTGCAAACAAAAGGAG+GGG | + | chr1_3:62772640-62772659 | None:intergenic | 45.0% | |
| CTCATCCTGCAAACAAAAGG+AGG | + | chr1_3:62772642-62772661 | None:intergenic | 45.0% | |
| GAGCTCATCCTGCAAACAAA+AGG | + | chr1_3:62772645-62772664 | None:intergenic | 45.0% | |
| TTGTTTGCAGGATGAGCTCT+AGG | - | chr1_3:62772646-62772665 | Msa0131810:intron | 45.0% | |
| TGTTTGCAGGATGAGCTCTA+GGG | - | chr1_3:62772647-62772666 | Msa0131810:intron | 45.0% | |
| TGTGGCAGATTGTGGCCATT+GGG | + | chr1_3:62769254-62769273 | None:intergenic | 50.0% | |
| ATGTGGCAGATTGTGGCCAT+TGG | + | chr1_3:62769255-62769274 | None:intergenic | 50.0% | |
| AGCGAGCGATTCCATTGCAA+TGG | - | chr1_3:62769423-62769442 | Msa0131810:intron | 50.0% | |
| CGCAGAAGCGATGGATAGAA+GGG | + | chr1_3:62769494-62769513 | None:intergenic | 50.0% | |
| TCGCAGAAGCGATGGATAGA+AGG | + | chr1_3:62769495-62769514 | None:intergenic | 50.0% | |
| TCTATCCATCGCTTCTGCGA+AGG | - | chr1_3:62769495-62769514 | Msa0131810:three_prime_UTR | 50.0% | |
| GAAAACCTTCGCAGAAGCGA+TGG | + | chr1_3:62769503-62769522 | None:intergenic | 50.0% | |
| !! | TTCTTCGAAGAGCGCTTCGA+AGG | - | chr1_3:62769520-62769539 | Msa0131810:three_prime_UTR | 50.0% |
| ! | TGCACCGAACGTGATGATGT+TGG | - | chr1_3:62769793-62769812 | Msa0131810:three_prime_UTR | 50.0% |
| GCCGGTGGGTAAAATCTGAA+TGG | - | chr1_3:62770461-62770480 | Msa0131810:intron | 50.0% | |
| AGAAGGATGAGAACTTGGCC+GGG | - | chr1_3:62770485-62770504 | Msa0131810:intron | 50.0% | |
| GGAACTACACCTCTGGTCAA+TGG | - | chr1_3:62770512-62770531 | Msa0131810:CDS | 50.0% | |
| GTCACCATTCCATTGACCAG+AGG | + | chr1_3:62770524-62770543 | None:intergenic | 50.0% | |
| TTCAGGGAACTCAGCAGAGA+TGG | + | chr1_3:62770703-62770722 | None:intergenic | 50.0% | |
| CAGAAACTTGACTGTGGTGG+TGG | - | chr1_3:62770774-62770793 | Msa0131810:intron | 50.0% | |
| GTAAGCTGGTCAGTCTCACA+AGG | + | chr1_3:62771070-62771089 | None:intergenic | 50.0% | |
| TGCTGTAGGTTGCATCAGGA+CGG | + | chr1_3:62771114-62771133 | None:intergenic | 50.0% | |
| !! | AGGGTACCTTTTTGGCCTCT+GGG | + | chr1_3:62771216-62771235 | None:intergenic | 50.0% |
| !!! | AAGGGTACCTTTTTGGCCTC+TGG | + | chr1_3:62771217-62771236 | None:intergenic | 50.0% |
| ! | CCTCTGGCTTCTTGTCTTCA+GGG | + | chr1_3:62771365-62771384 | None:intergenic | 50.0% |
| ! | ACCTCTGGCTTCTTGTCTTC+AGG | + | chr1_3:62771366-62771385 | None:intergenic | 50.0% |
| TTGTTGTGTAGCCTGAGGAC+TGG | - | chr1_3:62771590-62771609 | Msa0131810:intron | 50.0% | |
| TGTTGTGTAGCCTGAGGACT+GGG | - | chr1_3:62771591-62771610 | Msa0131810:intron | 50.0% | |
| GACTGGGATGATGAGGAAGA+TGG | - | chr1_3:62771607-62771626 | Msa0131810:intron | 50.0% | |
| !! | TACTCTGGGTTGGCAATGGT+AGG | + | chr1_3:62771646-62771665 | None:intergenic | 50.0% |
| !! | CTTGTACTCTGGGTTGGCAA+TGG | + | chr1_3:62771650-62771669 | None:intergenic | 50.0% |
| CATTGCCAACCCAGAGTACA+AGG | - | chr1_3:62771648-62771667 | Msa0131810:CDS | 50.0% | |
| TCCATGGTCCCTTGTACTCT+GGG | + | chr1_3:62771660-62771679 | None:intergenic | 50.0% | |
| TTCCATGGTCCCTTGTACTC+TGG | + | chr1_3:62771661-62771680 | None:intergenic | 50.0% | |
| ACCCCAACTACAGTGGAAAG+TGG | - | chr1_3:62771786-62771805 | Msa0131810:CDS | 50.0% | |
| ! | GCACCATTGATTGACAACCC+AGG | - | chr1_3:62771812-62771831 | Msa0131810:intron | 50.0% |
| !! | GTAGCTTGCTGGTCAGAGTT+TGG | + | chr1_3:62772052-62772071 | None:intergenic | 50.0% |
| !! | CGTTGATTCTGATGCGGAAG+AGG | - | chr1_3:62772443-62772462 | Msa0131810:intron | 50.0% |
| TTCTGATGCGGAAGAGGATG+AGG | - | chr1_3:62772449-62772468 | Msa0131810:intron | 50.0% | |
| GATGAGTCAAAGGCAGAAGC+TGG | - | chr1_3:62772504-62772523 | Msa0131810:intron | 50.0% | |
| ATTGGGTGAGTGCCACGTAC+GGG | + | chr1_3:62769237-62769256 | None:intergenic | 55.0% | |
| CATTGGGTGAGTGCCACGTA+CGG | + | chr1_3:62769238-62769257 | None:intergenic | 55.0% | |
| AAGATGGATGGGAAAGCCGG+TGG | - | chr1_3:62770446-62770465 | Msa0131810:intron | 55.0% | |
| AGATGGATGGGAAAGCCGGT+GGG | - | chr1_3:62770447-62770466 | Msa0131810:intron | 55.0% | |
| GAAGGATGAGAACTTGGCCG+GGG | - | chr1_3:62770486-62770505 | Msa0131810:intron | 55.0% | |
| ! | AGAGGTGTAGTTCCACTCCC+CGG | + | chr1_3:62770506-62770525 | None:intergenic | 55.0% |
| TTGGCGGTGATACTCCCTAC+AGG | - | chr1_3:62770838-62770857 | Msa0131810:CDS | 55.0% | |
| CAAGGACCCAGAGGCCAAAA+AGG | - | chr1_3:62771207-62771226 | Msa0131810:intron | 55.0% | |
| GGCTTCTTGTCTTCAGGGTC+AGG | + | chr1_3:62771360-62771379 | None:intergenic | 55.0% | |
| CCCTGAAGACAAGAAGCCAG+AGG | - | chr1_3:62771362-62771381 | Msa0131810:CDS | 55.0% | |
| TCCTCATCATCCCAGTCCTC+AGG | + | chr1_3:62771604-62771623 | None:intergenic | 55.0% | |
| TGGTCCCTTGTACTCTGGGT+TGG | + | chr1_3:62771656-62771675 | None:intergenic | 55.0% | |
| ACCCAGAGTACAAGGGACCA+TGG | - | chr1_3:62771656-62771675 | Msa0131810:CDS | 55.0% | |
| CAAGGGACCATGGAAGCCAA+AGG | - | chr1_3:62771666-62771685 | Msa0131810:CDS | 55.0% | |
| TCAGGGTCGTCCTTGAAGTC+TGG | + | chr1_3:62771928-62771947 | None:intergenic | 55.0% | |
| CGTACGTGGCACTCACCCAA+TGG | - | chr1_3:62769236-62769255 | Msa0131810:three_prime_UTR | 60.0% | |
| ATGAGAACTTGGCCGGGGAG+TGG | - | chr1_3:62770491-62770510 | Msa0131810:intron | 60.0% | |
| GGGGAGTGGAACTACACCTC+TGG | - | chr1_3:62770505-62770524 | Msa0131810:CDS | 60.0% | |
| GCCTGAGGACTGGGATGATG+AGG | - | chr1_3:62771600-62771619 | Msa0131810:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 62769223 | 62773271 | 62769223 | ID=Msa0131810;Name=Msa0131810 |
| chr1_3 | mRNA | 62769223 | 62773271 | 62769223 | ID=Msa0131810-mRNA-1;Parent=Msa0131810;Name=Msa0131810-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.92|0.86|1|0.92|0.86|15|553|450 |
| chr1_3 | exon | 62769223 | 62769387 | 62769223 | ID=Msa0131810-mRNA-1:exon:20969;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62769439 | 62769838 | 62769439 | ID=Msa0131810-mRNA-1:exon:20968;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62769928 | 62770068 | 62769928 | ID=Msa0131810-mRNA-1:exon:20967;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62770177 | 62770224 | 62770177 | ID=Msa0131810-mRNA-1:exon:20966;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62770315 | 62770410 | 62770315 | ID=Msa0131810-mRNA-1:exon:20965;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62770498 | 62770565 | 62770498 | ID=Msa0131810-mRNA-1:exon:20964;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62770661 | 62770718 | 62770661 | ID=Msa0131810-mRNA-1:exon:20963;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62770807 | 62770893 | 62770807 | ID=Msa0131810-mRNA-1:exon:20962;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62770972 | 62771019 | 62770972 | ID=Msa0131810-mRNA-1:exon:20961;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62771111 | 62771167 | 62771111 | ID=Msa0131810-mRNA-1:exon:20960;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62771266 | 62771524 | 62771266 | ID=Msa0131810-mRNA-1:exon:20959;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62771635 | 62771827 | 62771635 | ID=Msa0131810-mRNA-1:exon:20958;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62771938 | 62772045 | 62771938 | ID=Msa0131810-mRNA-1:exon:20957;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62772953 | 62773069 | 62772953 | ID=Msa0131810-mRNA-1:exon:20956;Parent=Msa0131810-mRNA-1 |
| chr1_3 | exon | 62773211 | 62773271 | 62773211 | ID=Msa0131810-mRNA-1:exon:20955;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62773211 | 62773271 | 62773211 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62772953 | 62773069 | 62772953 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62771938 | 62772045 | 62771938 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62771635 | 62771827 | 62771635 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62771266 | 62771524 | 62771266 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62771111 | 62771167 | 62771111 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62770972 | 62771019 | 62770972 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62770807 | 62770893 | 62770807 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62770661 | 62770718 | 62770661 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62770498 | 62770565 | 62770498 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62770315 | 62770410 | 62770315 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62770177 | 62770224 | 62770177 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62769928 | 62770068 | 62769928 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | CDS | 62769827 | 62769838 | 62769827 | ID=Msa0131810-mRNA-1:cds;Parent=Msa0131810-mRNA-1 |
| chr1_3 | three_prime_UTR | 62769439 | 62769826 | 62769439 | ID=Msa0131810-mRNA-1:three_prime_utr;Parent=Msa0131810-mRNA-1 |
| chr1_3 | three_prime_UTR | 62769223 | 62769387 | 62769223 | ID=Msa0131810-mRNA-1:three_prime_utr;Parent=Msa0131810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
