Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452920 | sp|Q41160|LCB3_ROBPS | 53.818 | 275 | 118 | 4 | 5 | 273 | 1 | 272 | 8.09e-95 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452920 | A0A072VPS3 | 69.455 | 275 | 80 | 2 | 1 | 272 | 1 | 274 | 2.36e-127 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012820 | Msa1452920 | 0.816841 | 4.490752e-52 | -8.615850e-47 |
| Msa0036230 | Msa1452920 | 0.870128 | 1.844049e-66 | -8.615850e-47 |
| Msa0036580 | Msa1452920 | 0.809335 | 1.991113e-50 | -8.615850e-47 |
| Msa0048950 | Msa1452920 | 0.801044 | 1.083875e-48 | -8.615850e-47 |
| Msa0061600 | Msa1452920 | 0.821659 | 3.590225e-53 | -8.615850e-47 |
| Msa0084150 | Msa1452920 | 0.873085 | 1.931713e-67 | -8.615850e-47 |
| Msa0084160 | Msa1452920 | 0.857287 | 1.808435e-62 | -8.615850e-47 |
| Msa0106130 | Msa1452920 | 0.829477 | 5.037323e-55 | -8.615850e-47 |
| Msa1357490 | Msa1452920 | 0.824408 | 8.202121e-54 | -8.615850e-47 |
| Msa1363690 | Msa1452920 | 0.804935 | 1.701330e-49 | -8.615850e-47 |
| Msa1365230 | Msa1452920 | 0.800300 | 1.537573e-48 | -8.615850e-47 |
| Msa1376070 | Msa1452920 | 0.822723 | 2.033100e-53 | -8.615850e-47 |
| Msa1377520 | Msa1452920 | 0.800272 | 1.557764e-48 | -8.615850e-47 |
| Msa1378950 | Msa1452920 | 0.855254 | 7.138435e-62 | -8.615850e-47 |
| Msa1380490 | Msa1452920 | 0.818904 | 1.536207e-52 | -8.615850e-47 |
| Msa1386260 | Msa1452920 | 0.814420 | 1.555105e-51 | -8.615850e-47 |
| Msa1393440 | Msa1452920 | 0.811445 | 6.977731e-51 | -8.615850e-47 |
| Msa1395690 | Msa1452920 | 0.811331 | 7.387066e-51 | -8.615850e-47 |
| Msa1396550 | Msa1452920 | 0.813367 | 2.653562e-51 | -8.615850e-47 |
| Msa1409600 | Msa1452920 | 0.825560 | 4.386933e-54 | -8.615850e-47 |
| Msa1411550 | Msa1452920 | 0.804567 | 2.030502e-49 | -8.615850e-47 |
| Msa1417220 | Msa1452920 | 0.814703 | 1.345862e-51 | -8.615850e-47 |
| Msa1421120 | Msa1452920 | 0.806398 | 8.386776e-50 | -8.615850e-47 |
| Msa1426420 | Msa1452920 | 0.807005 | 6.241812e-50 | -8.615850e-47 |
| Msa1447790 | Msa1452920 | 0.806221 | 9.138510e-50 | -8.615850e-47 |
| Msa1452920 | Msa1459610 | 0.809836 | 1.554192e-50 | -8.615850e-47 |
| Msa0604200 | Msa1452920 | 0.805536 | 1.273314e-49 | -8.615850e-47 |
| Msa0605460 | Msa1452920 | 0.835661 | 1.473789e-56 | -8.615850e-47 |
| Msa0605480 | Msa1452920 | 0.818468 | 1.930166e-52 | -8.615850e-47 |
| Msa0623750 | Msa1452920 | 0.813122 | 3.002548e-51 | -8.615850e-47 |
| Msa0629720 | Msa1452920 | 0.810917 | 9.078823e-51 | -8.615850e-47 |
| Msa0640290 | Msa1452920 | 0.823585 | 1.279622e-53 | -8.615850e-47 |
| Msa0643840 | Msa1452920 | 0.804972 | 1.670743e-49 | -8.615850e-47 |
| Msa0645120 | Msa1452920 | 0.817543 | 3.122352e-52 | -8.615850e-47 |
| Msa0646040 | Msa1452920 | 0.811058 | 8.463089e-51 | -8.615850e-47 |
| Msa0646440 | Msa1452920 | 0.817447 | 3.282071e-52 | -8.615850e-47 |
| Msa0667600 | Msa1452920 | 0.829787 | 4.232852e-55 | -8.615850e-47 |
| Msa0667620 | Msa1452920 | 0.812553 | 4.001181e-51 | -8.615850e-47 |
| Msa0670220 | Msa1452920 | 0.813440 | 2.556611e-51 | -8.615850e-47 |
| Msa0670360 | Msa1452920 | 0.824593 | 7.419967e-54 | -8.615850e-47 |
| Msa0671400 | Msa1452920 | 0.810207 | 1.292642e-50 | -8.615850e-47 |
| Msa0684600 | Msa1452920 | 0.807973 | 3.890863e-50 | -8.615850e-47 |
| Msa0716980 | Msa1452920 | 0.810867 | 9.308712e-51 | -8.615850e-47 |
| Msa0728610 | Msa1452920 | 0.822853 | 1.896753e-53 | -8.615850e-47 |
| Msa0758150 | Msa1452920 | 0.848690 | 5.220568e-60 | -8.615850e-47 |
| Msa0814230 | Msa1452920 | 0.807001 | 6.256101e-50 | -8.615850e-47 |
| Msa0816140 | Msa1452920 | 0.802483 | 5.492783e-49 | -8.615850e-47 |
| Msa0817100 | Msa1452920 | 0.852326 | 4.966904e-61 | -8.615850e-47 |
| Msa0824850 | Msa1452920 | 0.803202 | 3.902083e-49 | -8.615850e-47 |
| Msa0839130 | Msa1452920 | 0.818492 | 1.905742e-52 | -8.615850e-47 |
| Msa0139270 | Msa1452920 | 0.820529 | 6.536664e-53 | -8.615850e-47 |
| Msa0176620 | Msa1452920 | 0.812759 | 3.606637e-51 | -8.615850e-47 |
| Msa0184390 | Msa1452920 | 0.806314 | 8.736557e-50 | -8.615850e-47 |
| Msa0218060 | Msa1452920 | 0.801451 | 8.949593e-49 | -8.615850e-47 |
| Msa1233620 | Msa1452920 | 0.826912 | 2.090597e-54 | -8.615850e-47 |
| Msa1255710 | Msa1452920 | 0.825984 | 3.478786e-54 | -8.615850e-47 |
| Msa1269050 | Msa1452920 | 0.814419 | 1.555673e-51 | -8.615850e-47 |
| Msa1275840 | Msa1452920 | 0.827272 | 1.714816e-54 | -8.615850e-47 |
| Msa1300610 | Msa1452920 | 0.809152 | 2.178691e-50 | -8.615850e-47 |
| Msa1314020 | Msa1452920 | 0.827080 | 1.906211e-54 | -8.615850e-47 |
| Msa1323080 | Msa1452920 | 0.803490 | 3.400596e-49 | -8.615850e-47 |
| Msa1329740 | Msa1452920 | 0.814596 | 1.421452e-51 | -8.615850e-47 |
| Msa1336100 | Msa1452920 | 0.801321 | 9.512697e-49 | -8.615850e-47 |
| Msa1339490 | Msa1452920 | 0.930547 | 1.396217e-93 | -8.615850e-47 |
| Msa0414480 | Msa1452920 | 0.814904 | 1.214938e-51 | -8.615850e-47 |
| Msa0449360 | Msa1452920 | 0.800867 | 1.178263e-48 | -8.615850e-47 |
| Msa0469550 | Msa1452920 | 0.823532 | 1.316586e-53 | -8.615850e-47 |
| Msa0985700 | Msa1452920 | 0.801032 | 1.090223e-48 | -8.615850e-47 |
| Msa0987640 | Msa1452920 | 0.802008 | 6.877493e-49 | -8.615850e-47 |
| Msa1006940 | Msa1452920 | 0.843633 | 1.243105e-58 | -8.615850e-47 |
| Msa1021620 | Msa1452920 | 0.802154 | 6.417754e-49 | -8.615850e-47 |
| Msa1024480 | Msa1452920 | 0.803578 | 3.260073e-49 | -8.615850e-47 |
| Msa1036020 | Msa1452920 | 0.808490 | 3.018764e-50 | -8.615850e-47 |
| Msa1037350 | Msa1452920 | 0.810969 | 8.847771e-51 | -8.615850e-47 |
| Msa1061670 | Msa1452920 | 0.828493 | 8.719537e-55 | -8.615850e-47 |
| Msa1061760 | Msa1452920 | 0.803163 | 3.973604e-49 | -8.615850e-47 |
| Msa1064940 | Msa1452920 | 0.812893 | 3.371244e-51 | -8.615850e-47 |
| Msa1075030 | Msa1452920 | 0.803328 | 3.673417e-49 | -8.615850e-47 |
| Msa1076830 | Msa1452920 | 0.806837 | 6.775214e-50 | -8.615850e-47 |
| Msa1099640 | Msa1452920 | 0.815802 | 7.670563e-52 | -8.615850e-47 |
| Msa1106960 | Msa1452920 | 0.821509 | 3.888076e-53 | -8.615850e-47 |
| Msa0243970 | Msa1452920 | 0.805970 | 1.031910e-49 | -8.615850e-47 |
| Msa0243990 | Msa1452920 | 0.814656 | 1.378549e-51 | -8.615850e-47 |
| Msa0244310 | Msa1452920 | 0.802537 | 5.352154e-49 | -8.615850e-47 |
| Msa0258010 | Msa1452920 | 0.820848 | 5.522144e-53 | -8.615850e-47 |
| Msa0266740 | Msa1452920 | 0.824785 | 6.687568e-54 | -8.615850e-47 |
| Msa0269720 | Msa1452920 | 0.832826 | 7.575775e-56 | -8.615850e-47 |
| Msa0278940 | Msa1452920 | 0.847165 | 1.374501e-59 | -8.615850e-47 |
| Msa0335340 | Msa1452920 | 0.804197 | 2.425303e-49 | -8.615850e-47 |
| Msa0356200 | Msa1452920 | 0.815759 | 7.842605e-52 | -8.615850e-47 |
| Msa0356250 | Msa1452920 | 0.828634 | 8.060379e-55 | -8.615850e-47 |
| Msa0356320 | Msa1452920 | 0.835512 | 1.607252e-56 | -8.615850e-47 |
| Msa0356380 | Msa1452920 | 0.801149 | 1.032003e-48 | -8.615850e-47 |
| Msa0356410 | Msa1452920 | 0.806784 | 6.951407e-50 | -8.615850e-47 |
| Msa1115900 | Msa1452920 | 0.802880 | 4.547926e-49 | -8.615850e-47 |
| Msa1123010 | Msa1452920 | 0.811923 | 5.491981e-51 | -8.615850e-47 |
| Msa1155630 | Msa1452920 | 0.800117 | 1.675232e-48 | -8.615850e-47 |
| Msa1160540 | Msa1452920 | 0.815074 | 1.113753e-51 | -8.615850e-47 |
| Msa1164240 | Msa1452920 | 0.818887 | 1.550365e-52 | -8.615850e-47 |
| Msa1179190 | Msa1452920 | 0.834867 | 2.337418e-56 | -8.615850e-47 |
| Msa1220720 | Msa1452920 | 0.803353 | 3.629510e-49 | -8.615850e-47 |
| Msa0487100 | Msa1452920 | 0.810805 | 9.600394e-51 | -8.615850e-47 |
| Msa0491760 | Msa1452920 | 0.806172 | 9.359922e-50 | -8.615850e-47 |
| Msa0515260 | Msa1452920 | 0.830200 | 3.358224e-55 | -8.615850e-47 |
| Msa0531030 | Msa1452920 | 0.816119 | 6.517850e-52 | -8.615850e-47 |
| Msa0531080 | Msa1452920 | 0.821386 | 4.149588e-53 | -8.615850e-47 |
| Msa0535570 | Msa1452920 | 0.815131 | 1.081850e-51 | -8.615850e-47 |
| Msa0548760 | Msa1452920 | 0.806874 | 6.654028e-50 | -8.615850e-47 |
| Msa0549170 | Msa1452920 | 0.804403 | 2.196867e-49 | -8.615850e-47 |
| Msa0549970 | Msa1452920 | 0.831121 | 1.997892e-55 | -8.615850e-47 |
| Msa0587920 | Msa1452920 | 0.832933 | 7.124434e-56 | -8.615850e-47 |
| Msa0589460 | Msa1452920 | 0.831920 | 1.269812e-55 | -8.615850e-47 |
| Msa0589720 | Msa1452920 | 0.800269 | 1.560157e-48 | -8.615850e-47 |
| Msa0591490 | Msa1452920 | 0.813914 | 2.011040e-51 | -8.615850e-47 |
| Msa0863840 | Msa1452920 | 0.803389 | 3.568793e-49 | -8.615850e-47 |
| Msa0886370 | Msa1452920 | 0.805116 | 1.559496e-49 | -8.615850e-47 |
| Msa0893840 | Msa1452920 | 0.816628 | 5.012906e-52 | -8.615850e-47 |
| Msa0896920 | Msa1452920 | 0.814445 | 1.535074e-51 | -8.615850e-47 |
| Msa0896950 | Msa1452920 | 0.804790 | 1.823988e-49 | -8.615850e-47 |
| Msa0910830 | Msa1452920 | 0.806881 | 6.631184e-50 | -8.615850e-47 |
| Msa0913500 | Msa1452920 | 0.804980 | 1.664974e-49 | -8.615850e-47 |
| Msa0913550 | Msa1452920 | 0.827601 | 1.429873e-54 | -8.615850e-47 |
| Msa0951150 | Msa1452920 | 0.811752 | 5.981785e-51 | -8.615850e-47 |
| Msa0960090 | Msa1452920 | 0.800731 | 1.255818e-48 | -8.615850e-47 |
| Msa0971880 | Msa1452920 | 0.805235 | 1.472349e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452920 | MtrunA17_Chr1g0197801 | 59.786 | 281 | 70 | 4 | 1 | 272 | 1 | 247 | 6.19e-105 | 305 |
| Msa1452920 | MtrunA17_Chr3g0095851 | 50.714 | 280 | 129 | 3 | 1 | 273 | 2 | 279 | 2.03e-90 | 269 |
| Msa1452920 | MtrunA17_Chr3g0095861 | 50.714 | 280 | 129 | 3 | 1 | 273 | 1 | 278 | 2.73e-90 | 269 |
| Msa1452920 | MtrunA17_Chr3g0096161 | 52.222 | 270 | 127 | 2 | 1 | 269 | 1 | 269 | 1.00e-88 | 265 |
| Msa1452920 | MtrunA17_Chr3g0100011 | 56.170 | 235 | 100 | 2 | 21 | 255 | 44 | 275 | 9.62e-88 | 266 |
| Msa1452920 | MtrunA17_Chr3g0100031 | 53.942 | 241 | 108 | 2 | 21 | 261 | 17 | 254 | 7.87e-87 | 259 |
| Msa1452920 | MtrunA17_Chr3g0100021 | 52.743 | 237 | 107 | 3 | 21 | 255 | 5 | 238 | 1.03e-80 | 244 |
| Msa1452920 | MtrunA17_Chr1g0197771 | 49.603 | 252 | 123 | 3 | 14 | 264 | 15 | 263 | 4.10e-71 | 220 |
| Msa1452920 | MtrunA17_Chr3g0087611 | 47.826 | 276 | 126 | 11 | 1 | 264 | 1 | 270 | 1.01e-66 | 209 |
| Msa1452920 | MtrunA17_Chr1g0197791 | 43.357 | 286 | 130 | 10 | 1 | 275 | 1 | 265 | 5.29e-58 | 186 |
| Msa1452920 | MtrunA17_Chr1g0197761 | 43.066 | 274 | 137 | 10 | 1 | 265 | 1 | 264 | 8.63e-58 | 186 |
| Msa1452920 | MtrunA17_Chr8g0367061 | 40.755 | 265 | 129 | 11 | 14 | 262 | 10 | 262 | 4.47e-48 | 160 |
| Msa1452920 | MtrunA17_Chr1g0197821 | 68.750 | 112 | 35 | 0 | 1 | 112 | 1 | 112 | 1.16e-47 | 156 |
| Msa1452920 | MtrunA17_Chr1g0197821 | 77.778 | 63 | 11 | 1 | 213 | 272 | 114 | 176 | 1.99e-22 | 91.3 |
| Msa1452920 | MtrunA17_Chr8g0367051 | 39.630 | 270 | 129 | 12 | 14 | 262 | 10 | 266 | 9.55e-47 | 157 |
| Msa1452920 | MtrunA17_Chr1g0197751 | 48.000 | 175 | 85 | 4 | 94 | 265 | 16 | 187 | 1.85e-44 | 149 |
| Msa1452920 | MtrunA17_Chr5g0411771 | 38.194 | 288 | 138 | 13 | 6 | 261 | 8 | 287 | 3.22e-44 | 151 |
| Msa1452920 | MtrunA17_Chr5g0411751 | 40.964 | 249 | 118 | 11 | 35 | 261 | 38 | 279 | 6.13e-43 | 147 |
| Msa1452920 | MtrunA17_Chr5g0411741 | 39.919 | 248 | 121 | 10 | 35 | 261 | 38 | 278 | 2.06e-42 | 146 |
| Msa1452920 | MtrunA17_Chr4g0027601 | 36.940 | 268 | 125 | 7 | 2 | 265 | 6 | 233 | 3.38e-41 | 142 |
| Msa1452920 | MtrunA17_Chr5g0411761 | 36.585 | 287 | 144 | 13 | 5 | 261 | 8 | 286 | 4.52e-41 | 143 |
| Msa1452920 | MtrunA17_Chr8g0367031 | 39.662 | 237 | 126 | 8 | 36 | 259 | 25 | 257 | 1.32e-40 | 141 |
| Msa1452920 | MtrunA17_Chr8g0345451 | 38.806 | 268 | 148 | 10 | 1 | 261 | 1 | 259 | 2.72e-39 | 138 |
| Msa1452920 | MtrunA17_Chr8g0367041 | 37.553 | 237 | 131 | 8 | 36 | 259 | 25 | 257 | 1.37e-38 | 136 |
| Msa1452920 | MtrunA17_Chr8g0367071 | 36.765 | 272 | 151 | 10 | 11 | 269 | 18 | 281 | 3.44e-38 | 142 |
| Msa1452920 | MtrunA17_Chr4g0011021 | 38.819 | 237 | 133 | 8 | 30 | 262 | 35 | 263 | 1.61e-34 | 125 |
| Msa1452920 | MtrunA17_Chr4g0049601 | 35.926 | 270 | 143 | 12 | 17 | 268 | 17 | 274 | 6.44e-33 | 127 |
| Msa1452920 | MtrunA17_Chr8g0367021 | 39.732 | 224 | 119 | 9 | 49 | 261 | 40 | 258 | 7.40e-32 | 118 |
| Msa1452920 | MtrunA17_Chr4g0027651 | 34.586 | 266 | 130 | 10 | 2 | 261 | 19 | 246 | 3.33e-31 | 117 |
| Msa1452920 | MtrunA17_Chr5g0411731 | 34.553 | 246 | 135 | 11 | 37 | 261 | 35 | 275 | 1.32e-29 | 112 |
| Msa1452920 | MtrunA17_Chr5g0411721 | 32.922 | 243 | 143 | 8 | 35 | 261 | 44 | 282 | 1.15e-28 | 110 |
| Msa1452920 | MtrunA17_Chr8g0366941 | 35.510 | 245 | 143 | 8 | 35 | 268 | 30 | 270 | 1.86e-28 | 110 |
| Msa1452920 | MtrunA17_Chr8g0367011 | 34.657 | 277 | 150 | 13 | 8 | 261 | 27 | 295 | 3.31e-28 | 109 |
| Msa1452920 | MtrunA17_Chr7g0274651 | 32.157 | 255 | 152 | 9 | 23 | 262 | 24 | 272 | 1.79e-27 | 111 |
| Msa1452920 | MtrunA17_Chr7g0274661 | 31.071 | 280 | 170 | 8 | 4 | 266 | 11 | 284 | 2.49e-27 | 110 |
| Msa1452920 | MtrunA17_Chr8g0366991 | 35.366 | 246 | 144 | 8 | 35 | 268 | 124 | 366 | 1.50e-25 | 105 |
| Msa1452920 | MtrunA17_Chr4g0049611 | 32.819 | 259 | 147 | 12 | 19 | 262 | 19 | 265 | 9.04e-25 | 103 |
| Msa1452920 | MtrunA17_Chr4g0049551 | 32.830 | 265 | 156 | 8 | 5 | 254 | 3 | 260 | 2.31e-24 | 102 |
| Msa1452920 | MtrunA17_Chr4g0049581 | 31.801 | 261 | 160 | 9 | 15 | 262 | 30 | 285 | 5.64e-23 | 98.2 |
| Msa1452920 | MtrunA17_Chr3g0104481 | 29.368 | 269 | 136 | 7 | 11 | 269 | 6 | 230 | 3.28e-20 | 87.0 |
| Msa1452920 | MtrunA17_Chr8g0366981 | 30.827 | 266 | 135 | 11 | 9 | 268 | 4 | 226 | 2.68e-19 | 87.4 |
| Msa1452920 | MtrunA17_Chr1g0197811 | 48.000 | 75 | 38 | 1 | 103 | 177 | 2 | 75 | 2.71e-19 | 80.1 |
| Msa1452920 | MtrunA17_Chr4g0049561 | 32.773 | 238 | 142 | 11 | 36 | 257 | 27 | 262 | 1.48e-18 | 85.1 |
| Msa1452920 | MtrunA17_Chr8g0366961 | 35.669 | 157 | 94 | 4 | 35 | 186 | 43 | 197 | 1.09e-17 | 79.3 |
| Msa1452920 | MtrunA17_Chr5g0428851 | 31.295 | 278 | 153 | 13 | 13 | 259 | 7 | 277 | 2.01e-17 | 82.0 |
| Msa1452920 | MtrunA17_Chr1g0170201 | 29.744 | 195 | 117 | 6 | 77 | 259 | 93 | 279 | 2.88e-15 | 75.5 |
| Msa1452920 | MtrunA17_Chr7g0239321 | 28.571 | 266 | 149 | 11 | 22 | 260 | 7 | 258 | 2.53e-13 | 69.7 |
| Msa1452920 | MtrunA17_Chr5g0407721 | 28.000 | 200 | 119 | 7 | 76 | 255 | 87 | 281 | 6.74e-13 | 68.6 |
| Msa1452920 | MtrunA17_Chr5g0433941 | 31.797 | 217 | 125 | 8 | 59 | 263 | 49 | 254 | 8.99e-13 | 68.2 |
| Msa1452920 | MtrunA17_Chr7g0239261 | 28.044 | 271 | 167 | 10 | 16 | 265 | 1 | 264 | 1.69e-11 | 64.3 |
| Msa1452920 | MtrunA17_Chr2g0324171 | 29.688 | 256 | 150 | 11 | 41 | 272 | 29 | 278 | 2.32e-11 | 63.9 |
| Msa1452920 | MtrunA17_Chr7g0239371 | 31.646 | 237 | 123 | 11 | 50 | 260 | 36 | 259 | 7.51e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452920 | AT5G10530.1 | 39.837 | 246 | 121 | 13 | 35 | 262 | 19 | 255 | 2.20e-31 | 122 |
| Msa1452920 | AT5G65600.1 | 34.081 | 223 | 128 | 9 | 35 | 241 | 35 | 254 | 7.47e-23 | 98.2 |
| Msa1452920 | AT5G06740.1 | 31.227 | 269 | 143 | 12 | 16 | 258 | 5 | 257 | 6.46e-18 | 84.0 |
| Msa1452920 | AT5G06740.2 | 31.227 | 269 | 143 | 12 | 16 | 258 | 17 | 269 | 6.76e-18 | 84.0 |
| Msa1452920 | AT5G55830.1 | 31.390 | 223 | 130 | 8 | 57 | 260 | 49 | 267 | 1.20e-15 | 77.0 |
| Msa1452920 | AT5G03140.1 | 29.762 | 252 | 159 | 9 | 17 | 255 | 11 | 257 | 2.47e-14 | 73.2 |
| Msa1452920 | AT4G02410.1 | 27.757 | 263 | 151 | 11 | 31 | 266 | 22 | 272 | 2.78e-13 | 70.1 |
| Msa1452920 | AT3G53810.1 | 28.287 | 251 | 157 | 7 | 29 | 260 | 18 | 264 | 7.51e-13 | 68.9 |
| Msa1452920 | AT4G04960.2 | 30.172 | 232 | 130 | 8 | 36 | 244 | 21 | 243 | 8.23e-13 | 68.6 |
| Msa1452920 | AT4G04960.1 | 30.172 | 232 | 130 | 9 | 36 | 244 | 21 | 243 | 1.07e-12 | 68.2 |
| Msa1452920 | AT4G02420.1 | 27.820 | 266 | 162 | 11 | 17 | 260 | 6 | 263 | 4.80e-12 | 66.2 |
| Msa1452920 | AT5G01560.1 | 30.000 | 250 | 142 | 10 | 38 | 259 | 30 | 274 | 6.89e-12 | 65.9 |
| Msa1452920 | AT2G37710.1 | 26.000 | 250 | 160 | 8 | 31 | 260 | 20 | 264 | 8.53e-12 | 65.5 |
| Msa1452920 | AT4G29050.2 | 27.753 | 227 | 128 | 9 | 60 | 260 | 59 | 275 | 1.31e-11 | 65.1 |
| Msa1452920 | AT4G29050.1 | 27.753 | 227 | 128 | 9 | 60 | 260 | 45 | 261 | 1.37e-11 | 65.1 |
Find 75 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCCAACATGTGTGTATT+TGG | 0.093315 | tig0034309:+13412 | Msa1452920:intergenic |
| GAAAAGCTTGCAATATTATT+TGG | 0.099570 | tig0034309:+13110 | Msa1452920:intergenic |
| TTTCTTTAAAGAAAATAAAA+TGG | 0.247146 | tig0034309:-13373 | Msa1452920:CDS |
| AAAAGCTTGCAATATTATTT+GGG | 0.253456 | tig0034309:+13111 | Msa1452920:intergenic |
| ACTTCCTTGTAGGGAAATTA+TGG | 0.265257 | tig0034309:+13763 | Msa1452920:intergenic |
| ATTCAGCACCGGTGCCCATT+TGG | 0.272619 | tig0034309:-13664 | Msa1452920:CDS |
| CCCAACAGATCCAAACTATT+TGG | 0.303319 | tig0034309:-13702 | Msa1452920:CDS |
| TTCAGCACCGGTGCCCATTT+GGG | 0.316239 | tig0034309:-13663 | Msa1452920:CDS |
| TAAAGAAAATAAAATGGAAT+AGG | 0.318424 | tig0034309:-13367 | Msa1452920:CDS |
| AGTTGAGTTGCTAGGAATAT+TGG | 0.321296 | tig0034309:+13523 | Msa1452920:intergenic |
| ATTCCAACATGTGTGTATTT+GGG | 0.336887 | tig0034309:+13413 | Msa1452920:intergenic |
| CATCAGATGTGACAAACTTT+TGG | 0.346785 | tig0034309:+13579 | Msa1452920:intergenic |
| TGAGTAACACAACAGAAAAT+AGG | 0.348280 | tig0034309:+13879 | Msa1452920:intergenic |
| GCCCGACCAGCCAAATAGTT+TGG | 0.378898 | tig0034309:+13692 | Msa1452920:intergenic |
| GCCAAATAGTTTGGATCTGT+TGG | 0.383215 | tig0034309:+13701 | Msa1452920:intergenic |
| GCCAGTGGTTTCATCCCAAA+TGG | 0.385140 | tig0034309:+13649 | Msa1452920:intergenic |
| AAATTGAGGCACTTCCTTGT+AGG | 0.404967 | tig0034309:+13753 | Msa1452920:intergenic |
| TGGGCACCGGTGCTGAATAC+AGG | 0.408005 | tig0034309:+13669 | Msa1452920:intergenic |
| GGATTTACTATTACTGAAGT+TGG | 0.409756 | tig0034309:+13784 | Msa1452920:intergenic |
| AAAGAAAATAAAATGGAATA+GGG | 0.416250 | tig0034309:-13366 | Msa1452920:CDS |
| AGCTAAACAACCTCCATTCA+TGG | 0.418791 | tig0034309:-13163 | Msa1452920:CDS |
| TTGACTTGAAAGACCATGAA+TGG | 0.422733 | tig0034309:+13150 | Msa1452920:intergenic |
| CAAAAGTTTGTCACATCTGA+TGG | 0.426781 | tig0034309:-13578 | Msa1452920:CDS |
| AATTGAGGCACTTCCTTGTA+GGG | 0.429899 | tig0034309:+13754 | Msa1452920:intergenic |
| GTCGATCAAACCAAATCATA+TGG | 0.434983 | tig0034309:+13085 | Msa1452920:intergenic |
| AAACCAATCCTTACGGTGTT+CGG | 0.435951 | tig0034309:+13215 | Msa1452920:intergenic |
| ATAGTTGAAAAGGTACCATC+TGG | 0.449708 | tig0034309:+13269 | Msa1452920:intergenic |
| TCCGCATACAATCCATTTGT+TGG | 0.449749 | tig0034309:-13470 | Msa1452920:CDS |
| GTATTTGGGATCCCACCTAT+TGG | 0.452286 | tig0034309:+13427 | Msa1452920:intergenic |
| CCAAATAGTTTGGATCTGTT+GGG | 0.452907 | tig0034309:+13702 | Msa1452920:intergenic |
| TCCAAACTATTTGGCTGGTC+GGG | 0.455927 | tig0034309:-13693 | Msa1452920:CDS |
| ATGGTCTTTCAAGTCAAACT+TGG | 0.459323 | tig0034309:-13144 | Msa1452920:CDS |
| AGTTTGATAGTTATGCCAAT+AGG | 0.461031 | tig0034309:-13442 | Msa1452920:CDS |
| CTTCCGAACACCGTAAGGAT+TGG | 0.469222 | tig0034309:-13218 | Msa1452920:CDS |
| TCAAACTCTACACCAACAAA+TGG | 0.477349 | tig0034309:+13458 | Msa1452920:intergenic |
| GACTTGAGCAATAGTTGAAA+AGG | 0.492838 | tig0034309:+13259 | Msa1452920:intergenic |
| TGTCTTAGAGAGATTGTCAT+AGG | 0.497716 | tig0034309:+13313 | Msa1452920:intergenic |
| ATAAAATGGAATAGGGTGAA+TGG | 0.502888 | tig0034309:-13359 | Msa1452920:CDS |
| AACTCAACTGGTGGAAACCT+TGG | 0.508020 | tig0034309:-13509 | Msa1452920:CDS |
| GGCTATATCCAAGATTCCAT+TGG | 0.512019 | tig0034309:+13727 | Msa1452920:intergenic |
| GATTCCATTGGATAAAATTG+AGG | 0.512081 | tig0034309:+13739 | Msa1452920:intergenic |
| ATCCAAACTATTTGGCTGGT+CGG | 0.513232 | tig0034309:-13694 | Msa1452920:CDS |
| CCAGTGGTTTCATCCCAAAT+GGG | 0.521697 | tig0034309:+13650 | Msa1452920:intergenic |
| TTTCCACCAGTTGAGTTGCT+AGG | 0.525423 | tig0034309:+13515 | Msa1452920:intergenic |
| ATGGAGGTTGTTTAGCTGAC+CGG | 0.532538 | tig0034309:+13169 | Msa1452920:intergenic |
| AATATTCCTAGCAACTCAAC+TGG | 0.536663 | tig0034309:-13521 | Msa1452920:CDS |
| GGAATATTGGCTCGATCTTG+TGG | 0.539230 | tig0034309:+13536 | Msa1452920:intergenic |
| TCGGGCCCTGTATTCAGCAC+CGG | 0.539297 | tig0034309:-13675 | Msa1452920:CDS |
| ACAGATCCAAACTATTTGGC+TGG | 0.541475 | tig0034309:-13698 | Msa1452920:CDS |
| GGGCACCGGTGCTGAATACA+GGG | 0.542627 | tig0034309:+13670 | Msa1452920:intergenic |
| TTGATAGTTATGCCAATAGG+TGG | 0.543485 | tig0034309:-13439 | Msa1452920:CDS |
| CCCATTTGGGATGAAACCAC+TGG | 0.547396 | tig0034309:-13650 | Msa1452920:CDS |
| ATAGTTTGGATCTGTTGGGT+TGG | 0.547533 | tig0034309:+13706 | Msa1452920:intergenic |
| GAATAGGGTGAATGGCGCCT+TGG | 0.550930 | tig0034309:-13351 | Msa1452920:CDS |
| GCTTGCAATATTATTTGGGG+TGG | 0.556881 | tig0034309:+13115 | Msa1452920:intergenic |
| AAAGCTTGCAATATTATTTG+GGG | 0.560702 | tig0034309:+13112 | Msa1452920:intergenic |
| CAGAGCTTCCGAACACCGTA+AGG | 0.561999 | tig0034309:-13223 | Msa1452920:CDS |
| GCTGCCACATCAAGAGGTGC+CGG | 0.566269 | tig0034309:-13188 | Msa1452920:CDS |
| GTCATGCACTCTGAATGAAA+AGG | 0.571753 | tig0034309:+13604 | Msa1452920:intergenic |
| GATCCCAAATACACACATGT+TGG | 0.576936 | tig0034309:-13416 | Msa1452920:CDS |
| AAATCCATAATTTCCCTACA+AGG | 0.579177 | tig0034309:-13767 | Msa1452920:CDS |
| ATTCCTAGCAACTCAACTGG+TGG | 0.582588 | tig0034309:-13518 | Msa1452920:CDS |
| ACTGAAGTTGGTGATGTCGA+AGG | 0.592142 | tig0034309:+13796 | Msa1452920:intergenic |
| GAAGCTCGCCACGTTGCCAG+TGG | 0.595816 | tig0034309:+13634 | Msa1452920:intergenic |
| GTTTCATCCCAAATGGGCAC+CGG | 0.596050 | tig0034309:+13656 | Msa1452920:intergenic |
| TGATAGTTATGCCAATAGGT+GGG | 0.619156 | tig0034309:-13438 | Msa1452920:CDS |
| ATTTGTTGGAAAGAAAGCCA+TGG | 0.619705 | tig0034309:+13907 | Msa1452920:intergenic |
| GTGGTTGTATCTTACCCAGA+TGG | 0.625936 | tig0034309:-13284 | Msa1452920:CDS |
| CTGACCGGCACCTCTTGATG+TGG | 0.630323 | tig0034309:+13184 | Msa1452920:intergenic |
| TAGTTGAAAAGGTACCATCT+GGG | 0.650948 | tig0034309:+13270 | Msa1452920:intergenic |
| TCTCTCTAAGACATTGAATG+TGG | 0.660926 | tig0034309:-13303 | Msa1452920:CDS |
| ACCAACAAATGGATTGTATG+CGG | 0.667112 | tig0034309:+13469 | Msa1452920:intergenic |
| ACTTGAAAGACCATGAATGG+AGG | 0.674593 | tig0034309:+13153 | Msa1452920:intergenic |
| GGAGATATTAACATCGACCA+AGG | 0.682054 | tig0034309:+13334 | Msa1452920:intergenic |
| GGATGAAACCACTGGCAACG+TGG | 0.707919 | tig0034309:-13642 | Msa1452920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTAAAGAAAATAAAA+TGG | - | tig0034309:13632-13651 | Msa1452920:CDS | 10.0% |
| !!! | TTTCTTTAAAGAAAATAAAA+TGG | - | tig0034309:13632-13651 | Msa1452920:CDS | 10.0% |
| !! | TAAAGAAAATAAAATGGAAT+AGG | - | tig0034309:13638-13657 | Msa1452920:CDS | 15.0% |
| !! | AAAGAAAATAAAATGGAATA+GGG | - | tig0034309:13639-13658 | Msa1452920:CDS | 15.0% |
| !! | TAAAGAAAATAAAATGGAAT+AGG | - | tig0034309:13638-13657 | Msa1452920:CDS | 15.0% |
| !! | AAAGAAAATAAAATGGAATA+GGG | - | tig0034309:13639-13658 | Msa1452920:CDS | 15.0% |
| !! | AAAAGCTTGCAATATTATTT+GGG | + | tig0034309:13897-13916 | Msa1452920:intergenic | 20.0% |
| !! | AAAAGCTTGCAATATTATTT+GGG | + | tig0034309:13897-13916 | Msa1452920:intergenic | 20.0% |
| !!! | GAAAATAGGTTTTGATTTGT+TGG | + | tig0034309:13115-13134 | None:intergenic | 25.0% |
| !! | AATTTTATCCAATGGAATCT+TGG | - | tig0034309:13270-13289 | Msa1452920:CDS | 25.0% |
| !! | AGTTTTCATTAACAATTCCA+AGG | + | tig0034309:13516-13535 | Msa1452920:intergenic | 25.0% |
| ! | AAAGCTTGCAATATTATTTG+GGG | + | tig0034309:13896-13915 | Msa1452920:intergenic | 25.0% |
| ! | GAAAAGCTTGCAATATTATT+TGG | + | tig0034309:13898-13917 | Msa1452920:intergenic | 25.0% |
| !!! | GAAAATAGGTTTTGATTTGT+TGG | + | tig0034309:13115-13134 | Msa1452920:intergenic | 25.0% |
| !! | AATTTTATCCAATGGAATCT+TGG | - | tig0034309:13270-13289 | Msa1452920:CDS | 25.0% |
| !! | AGTTTTCATTAACAATTCCA+AGG | + | tig0034309:13516-13535 | Msa1452920:intergenic | 25.0% |
| ! | AAAGCTTGCAATATTATTTG+GGG | + | tig0034309:13896-13915 | Msa1452920:intergenic | 25.0% |
| ! | GAAAAGCTTGCAATATTATT+TGG | + | tig0034309:13898-13917 | Msa1452920:intergenic | 25.0% |
| TGAGTAACACAACAGAAAAT+AGG | + | tig0034309:13129-13148 | None:intergenic | 30.0% | |
| GGATTTACTATTACTGAAGT+TGG | + | tig0034309:13224-13243 | None:intergenic | 30.0% | |
| AAATCCATAATTTCCCTACA+AGG | - | tig0034309:13238-13257 | Msa1452920:CDS | 30.0% | |
| GATTCCATTGGATAAAATTG+AGG | + | tig0034309:13269-13288 | Msa1452920:intergenic | 30.0% | |
| ! | AGTTTGATAGTTATGCCAAT+AGG | - | tig0034309:13563-13582 | Msa1452920:CDS | 30.0% |
| ATTCCAACATGTGTGTATTT+GGG | + | tig0034309:13595-13614 | Msa1452920:intergenic | 30.0% | |
| AATTCCAACATGTGTGTATT+TGG | + | tig0034309:13596-13615 | Msa1452920:intergenic | 30.0% | |
| ATAAAATGGAATAGGGTGAA+TGG | - | tig0034309:13646-13665 | Msa1452920:CDS | 30.0% | |
| TGAGTAACACAACAGAAAAT+AGG | + | tig0034309:13129-13148 | Msa1452920:intergenic | 30.0% | |
| GGATTTACTATTACTGAAGT+TGG | + | tig0034309:13224-13243 | Msa1452920:intergenic | 30.0% | |
| AAATCCATAATTTCCCTACA+AGG | - | tig0034309:13238-13257 | Msa1452920:CDS | 30.0% | |
| GATTCCATTGGATAAAATTG+AGG | + | tig0034309:13269-13288 | Msa1452920:intergenic | 30.0% | |
| ! | AGTTTGATAGTTATGCCAAT+AGG | - | tig0034309:13563-13582 | Msa1452920:CDS | 30.0% |
| ATTCCAACATGTGTGTATTT+GGG | + | tig0034309:13595-13614 | Msa1452920:intergenic | 30.0% | |
| AATTCCAACATGTGTGTATT+TGG | + | tig0034309:13596-13615 | Msa1452920:intergenic | 30.0% | |
| ATAAAATGGAATAGGGTGAA+TGG | - | tig0034309:13646-13665 | Msa1452920:CDS | 30.0% | |
| !!! | GAAGGAAACTGTTTTTTGTG+AGG | + | tig0034309:13194-13213 | None:intergenic | 35.0% |
| ACTTCCTTGTAGGGAAATTA+TGG | + | tig0034309:13245-13264 | Msa1452920:intergenic | 35.0% | |
| ! | AGTGCCTCAATTTTATCCAA+TGG | - | tig0034309:13262-13281 | Msa1452920:CDS | 35.0% |
| CCAAATAGTTTGGATCTGTT+GGG | + | tig0034309:13306-13325 | Msa1452920:intergenic | 35.0% | |
| ! | CATCAGATGTGACAAACTTT+TGG | + | tig0034309:13429-13448 | Msa1452920:intergenic | 35.0% |
| CAAAAGTTTGTCACATCTGA+TGG | - | tig0034309:13427-13446 | Msa1452920:CDS | 35.0% | |
| ! | AGTTGAGTTGCTAGGAATAT+TGG | + | tig0034309:13485-13504 | Msa1452920:intergenic | 35.0% |
| AATATTCCTAGCAACTCAAC+TGG | - | tig0034309:13484-13503 | Msa1452920:CDS | 35.0% | |
| !! | ACCAACAAATGGATTGTATG+CGG | + | tig0034309:13539-13558 | Msa1452920:intergenic | 35.0% |
| TCAAACTCTACACCAACAAA+TGG | + | tig0034309:13550-13569 | Msa1452920:intergenic | 35.0% | |
| ! | TTGATAGTTATGCCAATAGG+TGG | - | tig0034309:13566-13585 | Msa1452920:CDS | 35.0% |
| TGATAGTTATGCCAATAGGT+GGG | - | tig0034309:13567-13586 | Msa1452920:CDS | 35.0% | |
| TGTCTTAGAGAGATTGTCAT+AGG | + | tig0034309:13695-13714 | Msa1452920:intergenic | 35.0% | |
| !! | TCTCTCTAAGACATTGAATG+TGG | - | tig0034309:13702-13721 | Msa1452920:CDS | 35.0% |
| !! | TAGTTGAAAAGGTACCATCT+GGG | + | tig0034309:13738-13757 | Msa1452920:intergenic | 35.0% |
| !! | ATAGTTGAAAAGGTACCATC+TGG | + | tig0034309:13739-13758 | Msa1452920:intergenic | 35.0% |
| GACTTGAGCAATAGTTGAAA+AGG | + | tig0034309:13749-13768 | Msa1452920:intergenic | 35.0% | |
| AGCAGAAAAACCAATCCTTA+CGG | + | tig0034309:13800-13819 | Msa1452920:intergenic | 35.0% | |
| ! | TTGACTTGAAAGACCATGAA+TGG | + | tig0034309:13858-13877 | Msa1452920:intergenic | 35.0% |
| ! | ATGGTCTTTCAAGTCAAACT+TGG | - | tig0034309:13861-13880 | Msa1452920:CDS | 35.0% |
| !!! | GAAGGAAACTGTTTTTTGTG+AGG | + | tig0034309:13194-13213 | Msa1452920:intergenic | 35.0% |
| ACTTCCTTGTAGGGAAATTA+TGG | + | tig0034309:13245-13264 | Msa1452920:intergenic | 35.0% | |
| ! | AGTGCCTCAATTTTATCCAA+TGG | - | tig0034309:13262-13281 | Msa1452920:CDS | 35.0% |
| CCAAATAGTTTGGATCTGTT+GGG | + | tig0034309:13306-13325 | Msa1452920:intergenic | 35.0% | |
| ! | CATCAGATGTGACAAACTTT+TGG | + | tig0034309:13429-13448 | Msa1452920:intergenic | 35.0% |
| CAAAAGTTTGTCACATCTGA+TGG | - | tig0034309:13427-13446 | Msa1452920:CDS | 35.0% | |
| ! | AGTTGAGTTGCTAGGAATAT+TGG | + | tig0034309:13485-13504 | Msa1452920:intergenic | 35.0% |
| AATATTCCTAGCAACTCAAC+TGG | - | tig0034309:13484-13503 | Msa1452920:CDS | 35.0% | |
| !! | ACCAACAAATGGATTGTATG+CGG | + | tig0034309:13539-13558 | Msa1452920:intergenic | 35.0% |
| TCAAACTCTACACCAACAAA+TGG | + | tig0034309:13550-13569 | Msa1452920:intergenic | 35.0% | |
| ! | TTGATAGTTATGCCAATAGG+TGG | - | tig0034309:13566-13585 | Msa1452920:CDS | 35.0% |
| TGATAGTTATGCCAATAGGT+GGG | - | tig0034309:13567-13586 | Msa1452920:CDS | 35.0% | |
| TGTCTTAGAGAGATTGTCAT+AGG | + | tig0034309:13695-13714 | Msa1452920:intergenic | 35.0% | |
| !! | TCTCTCTAAGACATTGAATG+TGG | - | tig0034309:13702-13721 | Msa1452920:CDS | 35.0% |
| !! | TAGTTGAAAAGGTACCATCT+GGG | + | tig0034309:13738-13757 | Msa1452920:intergenic | 35.0% |
| !! | ATAGTTGAAAAGGTACCATC+TGG | + | tig0034309:13739-13758 | Msa1452920:intergenic | 35.0% |
| GACTTGAGCAATAGTTGAAA+AGG | + | tig0034309:13749-13768 | Msa1452920:intergenic | 35.0% | |
| AGCAGAAAAACCAATCCTTA+CGG | + | tig0034309:13800-13819 | Msa1452920:intergenic | 35.0% | |
| ! | TTGACTTGAAAGACCATGAA+TGG | + | tig0034309:13858-13877 | Msa1452920:intergenic | 35.0% |
| ! | ATGGTCTTTCAAGTCAAACT+TGG | - | tig0034309:13861-13880 | Msa1452920:CDS | 35.0% |
| ! | AATTGAGGCACTTCCTTGTA+GGG | + | tig0034309:13254-13273 | Msa1452920:intergenic | 40.0% |
| ! | AAATTGAGGCACTTCCTTGT+AGG | + | tig0034309:13255-13274 | Msa1452920:intergenic | 40.0% |
| GGCTATATCCAAGATTCCAT+TGG | + | tig0034309:13281-13300 | Msa1452920:intergenic | 40.0% | |
| ATAGTTTGGATCTGTTGGGT+TGG | + | tig0034309:13302-13321 | Msa1452920:intergenic | 40.0% | |
| CCCAACAGATCCAAACTATT+TGG | - | tig0034309:13303-13322 | Msa1452920:CDS | 40.0% | |
| GCCAAATAGTTTGGATCTGT+TGG | + | tig0034309:13307-13326 | Msa1452920:intergenic | 40.0% | |
| ACAGATCCAAACTATTTGGC+TGG | - | tig0034309:13307-13326 | Msa1452920:CDS | 40.0% | |
| ATCCAAACTATTTGGCTGGT+CGG | - | tig0034309:13311-13330 | Msa1452920:CDS | 40.0% | |
| GTCATGCACTCTGAATGAAA+AGG | + | tig0034309:13404-13423 | Msa1452920:intergenic | 40.0% | |
| TCCGCATACAATCCATTTGT+TGG | - | tig0034309:13535-13554 | Msa1452920:CDS | 40.0% | |
| GATCCCAAATACACACATGT+TGG | - | tig0034309:13589-13608 | Msa1452920:CDS | 40.0% | |
| GGAGATATTAACATCGACCA+AGG | + | tig0034309:13674-13693 | Msa1452920:intergenic | 40.0% | |
| AAACCAATCCTTACGGTGTT+CGG | + | tig0034309:13793-13812 | Msa1452920:intergenic | 40.0% | |
| AGCTAAACAACCTCCATTCA+TGG | - | tig0034309:13842-13861 | Msa1452920:CDS | 40.0% | |
| ACTTGAAAGACCATGAATGG+AGG | + | tig0034309:13855-13874 | Msa1452920:intergenic | 40.0% | |
| GCTTGCAATATTATTTGGGG+TGG | + | tig0034309:13893-13912 | Msa1452920:intergenic | 40.0% | |
| ! | AATTGAGGCACTTCCTTGTA+GGG | + | tig0034309:13254-13273 | Msa1452920:intergenic | 40.0% |
| ! | AAATTGAGGCACTTCCTTGT+AGG | + | tig0034309:13255-13274 | Msa1452920:intergenic | 40.0% |
| GGCTATATCCAAGATTCCAT+TGG | + | tig0034309:13281-13300 | Msa1452920:intergenic | 40.0% | |
| ATAGTTTGGATCTGTTGGGT+TGG | + | tig0034309:13302-13321 | Msa1452920:intergenic | 40.0% | |
| CCCAACAGATCCAAACTATT+TGG | - | tig0034309:13303-13322 | Msa1452920:CDS | 40.0% | |
| GCCAAATAGTTTGGATCTGT+TGG | + | tig0034309:13307-13326 | Msa1452920:intergenic | 40.0% | |
| ACAGATCCAAACTATTTGGC+TGG | - | tig0034309:13307-13326 | Msa1452920:CDS | 40.0% | |
| ATCCAAACTATTTGGCTGGT+CGG | - | tig0034309:13311-13330 | Msa1452920:CDS | 40.0% | |
| GTCATGCACTCTGAATGAAA+AGG | + | tig0034309:13404-13423 | Msa1452920:intergenic | 40.0% | |
| TCCGCATACAATCCATTTGT+TGG | - | tig0034309:13535-13554 | Msa1452920:CDS | 40.0% | |
| GATCCCAAATACACACATGT+TGG | - | tig0034309:13589-13608 | Msa1452920:CDS | 40.0% | |
| GGAGATATTAACATCGACCA+AGG | + | tig0034309:13674-13693 | Msa1452920:intergenic | 40.0% | |
| AAACCAATCCTTACGGTGTT+CGG | + | tig0034309:13793-13812 | Msa1452920:intergenic | 40.0% | |
| AGCTAAACAACCTCCATTCA+TGG | - | tig0034309:13842-13861 | Msa1452920:CDS | 40.0% | |
| ACTTGAAAGACCATGAATGG+AGG | + | tig0034309:13855-13874 | Msa1452920:intergenic | 40.0% | |
| GCTTGCAATATTATTTGGGG+TGG | + | tig0034309:13893-13912 | Msa1452920:intergenic | 40.0% | |
| !! | ACTGAAGTTGGTGATGTCGA+AGG | + | tig0034309:13212-13231 | None:intergenic | 45.0% |
| ! | TCCAAACTATTTGGCTGGTC+GGG | - | tig0034309:13312-13331 | Msa1452920:CDS | 45.0% |
| CCAGTGGTTTCATCCCAAAT+GGG | + | tig0034309:13358-13377 | Msa1452920:intergenic | 45.0% | |
| !! | GGAATATTGGCTCGATCTTG+TGG | + | tig0034309:13472-13491 | Msa1452920:intergenic | 45.0% |
| ATTCCTAGCAACTCAACTGG+TGG | - | tig0034309:13487-13506 | Msa1452920:CDS | 45.0% | |
| ! | TTTCCACCAGTTGAGTTGCT+AGG | + | tig0034309:13493-13512 | Msa1452920:intergenic | 45.0% |
| AACTCAACTGGTGGAAACCT+TGG | - | tig0034309:13496-13515 | Msa1452920:CDS | 45.0% | |
| ! | GTATTTGGGATCCCACCTAT+TGG | + | tig0034309:13581-13600 | Msa1452920:intergenic | 45.0% |
| GTGGTTGTATCTTACCCAGA+TGG | - | tig0034309:13721-13740 | Msa1452920:CDS | 45.0% | |
| ! | TTTTCTGCTGCCACATCAAG+AGG | - | tig0034309:13811-13830 | Msa1452920:CDS | 45.0% |
| ATGGAGGTTGTTTAGCTGAC+CGG | + | tig0034309:13839-13858 | Msa1452920:intergenic | 45.0% | |
| !! | ACTGAAGTTGGTGATGTCGA+AGG | + | tig0034309:13212-13231 | Msa1452920:intergenic | 45.0% |
| ! | TCCAAACTATTTGGCTGGTC+GGG | - | tig0034309:13312-13331 | Msa1452920:CDS | 45.0% |
| CCAGTGGTTTCATCCCAAAT+GGG | + | tig0034309:13358-13377 | Msa1452920:intergenic | 45.0% | |
| !! | GGAATATTGGCTCGATCTTG+TGG | + | tig0034309:13472-13491 | Msa1452920:intergenic | 45.0% |
| ATTCCTAGCAACTCAACTGG+TGG | - | tig0034309:13487-13506 | Msa1452920:CDS | 45.0% | |
| ! | TTTCCACCAGTTGAGTTGCT+AGG | + | tig0034309:13493-13512 | Msa1452920:intergenic | 45.0% |
| AACTCAACTGGTGGAAACCT+TGG | - | tig0034309:13496-13515 | Msa1452920:CDS | 45.0% | |
| ! | GTATTTGGGATCCCACCTAT+TGG | + | tig0034309:13581-13600 | Msa1452920:intergenic | 45.0% |
| GTGGTTGTATCTTACCCAGA+TGG | - | tig0034309:13721-13740 | Msa1452920:CDS | 45.0% | |
| ! | TTTTCTGCTGCCACATCAAG+AGG | - | tig0034309:13811-13830 | Msa1452920:CDS | 45.0% |
| ATGGAGGTTGTTTAGCTGAC+CGG | + | tig0034309:13839-13858 | Msa1452920:intergenic | 45.0% | |
| GTTTCATCCCAAATGGGCAC+CGG | + | tig0034309:13352-13371 | Msa1452920:intergenic | 50.0% | |
| ! | CCCATTTGGGATGAAACCAC+TGG | - | tig0034309:13355-13374 | Msa1452920:CDS | 50.0% |
| GCCAGTGGTTTCATCCCAAA+TGG | + | tig0034309:13359-13378 | Msa1452920:intergenic | 50.0% | |
| CTTCCGAACACCGTAAGGAT+TGG | - | tig0034309:13787-13806 | Msa1452920:CDS | 50.0% | |
| GTTTCATCCCAAATGGGCAC+CGG | + | tig0034309:13352-13371 | Msa1452920:intergenic | 50.0% | |
| ! | CCCATTTGGGATGAAACCAC+TGG | - | tig0034309:13355-13374 | Msa1452920:CDS | 50.0% |
| GCCAGTGGTTTCATCCCAAA+TGG | + | tig0034309:13359-13378 | Msa1452920:intergenic | 50.0% | |
| CTTCCGAACACCGTAAGGAT+TGG | - | tig0034309:13787-13806 | Msa1452920:CDS | 50.0% | |
| GCCCGACCAGCCAAATAGTT+TGG | + | tig0034309:13316-13335 | Msa1452920:intergenic | 55.0% | |
| !! | ATTCAGCACCGGTGCCCATT+TGG | - | tig0034309:13341-13360 | Msa1452920:CDS | 55.0% |
| !! | TTCAGCACCGGTGCCCATTT+GGG | - | tig0034309:13342-13361 | Msa1452920:CDS | 55.0% |
| GGATGAAACCACTGGCAACG+TGG | - | tig0034309:13363-13382 | Msa1452920:CDS | 55.0% | |
| GAATAGGGTGAATGGCGCCT+TGG | - | tig0034309:13654-13673 | Msa1452920:CDS | 55.0% | |
| CAGAGCTTCCGAACACCGTA+AGG | - | tig0034309:13782-13801 | Msa1452920:CDS | 55.0% | |
| GCCCGACCAGCCAAATAGTT+TGG | + | tig0034309:13316-13335 | Msa1452920:intergenic | 55.0% | |
| !! | ATTCAGCACCGGTGCCCATT+TGG | - | tig0034309:13341-13360 | Msa1452920:CDS | 55.0% |
| !! | TTCAGCACCGGTGCCCATTT+GGG | - | tig0034309:13342-13361 | Msa1452920:CDS | 55.0% |
| GGATGAAACCACTGGCAACG+TGG | - | tig0034309:13363-13382 | Msa1452920:CDS | 55.0% | |
| GAATAGGGTGAATGGCGCCT+TGG | - | tig0034309:13654-13673 | Msa1452920:CDS | 55.0% | |
| CAGAGCTTCCGAACACCGTA+AGG | - | tig0034309:13782-13801 | Msa1452920:CDS | 55.0% | |
| TCGGGCCCTGTATTCAGCAC+CGG | - | tig0034309:13330-13349 | Msa1452920:CDS | 60.0% | |
| !! | GGGCACCGGTGCTGAATACA+GGG | + | tig0034309:13338-13357 | Msa1452920:intergenic | 60.0% |
| !! | TGGGCACCGGTGCTGAATAC+AGG | + | tig0034309:13339-13358 | Msa1452920:intergenic | 60.0% |
| ! | GCTGCCACATCAAGAGGTGC+CGG | - | tig0034309:13817-13836 | Msa1452920:CDS | 60.0% |
| CTGACCGGCACCTCTTGATG+TGG | + | tig0034309:13824-13843 | Msa1452920:intergenic | 60.0% | |
| TCGGGCCCTGTATTCAGCAC+CGG | - | tig0034309:13330-13349 | Msa1452920:CDS | 60.0% | |
| !! | GGGCACCGGTGCTGAATACA+GGG | + | tig0034309:13338-13357 | Msa1452920:intergenic | 60.0% |
| !! | TGGGCACCGGTGCTGAATAC+AGG | + | tig0034309:13339-13358 | Msa1452920:intergenic | 60.0% |
| ! | GCTGCCACATCAAGAGGTGC+CGG | - | tig0034309:13817-13836 | Msa1452920:CDS | 60.0% |
| CTGACCGGCACCTCTTGATG+TGG | + | tig0034309:13824-13843 | Msa1452920:intergenic | 60.0% | |
| GAAGCTCGCCACGTTGCCAG+TGG | + | tig0034309:13374-13393 | Msa1452920:intergenic | 65.0% | |
| GAAGCTCGCCACGTTGCCAG+TGG | + | tig0034309:13374-13393 | Msa1452920:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034309 | gene | 13100 | 13927 | 13100 | ID=Msa1452920;Name=Msa1452920 |
| tig0034309 | mRNA | 13100 | 13927 | 13100 | ID=Msa1452920-mRNA-1;Parent=Msa1452920;Name=Msa1452920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|275 |
| tig0034309 | exon | 13100 | 13927 | 13100 | ID=Msa1452920-mRNA-1:exon:18880;Parent=Msa1452920-mRNA-1 |
| tig0034309 | CDS | 13100 | 13927 | 13100 | ID=Msa1452920-mRNA-1:cds;Parent=Msa1452920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
