Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908440 | YP_009141653.1 | 100.000 | 155 | 0 | 0 | 1 | 155 | 1 | 155 | 3.73e-109 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908440 | sp|Q9B1A1|RR7_LOTJA | 96.774 | 155 | 5 | 0 | 1 | 155 | 1 | 155 | 3.68e-109 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095190 | Msa0908440 | 0.808908 | 2.457899e-50 | -8.615850e-47 |
| Msa0139800 | Msa0908440 | 0.807871 | 4.090567e-50 | -8.615850e-47 |
| Msa0202640 | Msa0908440 | 0.832674 | 8.261049e-56 | -8.615850e-47 |
| Msa0370210 | Msa0908440 | 0.821891 | 3.172131e-53 | -8.615850e-47 |
| Msa0398630 | Msa0908440 | 0.813296 | 2.750322e-51 | -8.615850e-47 |
| Msa0405420 | Msa0908440 | 0.853075 | 3.036880e-61 | -8.615850e-47 |
| Msa0405430 | Msa0908440 | 0.889689 | 1.934876e-73 | -8.615850e-47 |
| Msa0405440 | Msa0908440 | 0.871919 | 4.733328e-67 | -8.615850e-47 |
| Msa0405510 | Msa0908440 | 0.864521 | 1.145065e-64 | -8.615850e-47 |
| Msa0405520 | Msa0908440 | 0.863159 | 3.036804e-64 | -8.615850e-47 |
| Msa0405530 | Msa0908440 | 0.864081 | 1.571530e-64 | -8.615850e-47 |
| Msa0263770 | Msa0908440 | 0.846622 | 1.935345e-59 | -8.615850e-47 |
| Msa0268170 | Msa0908440 | 0.821774 | 3.375593e-53 | -8.615850e-47 |
| Msa0268250 | Msa0908440 | 0.857680 | 1.383786e-62 | -8.615850e-47 |
| Msa0268260 | Msa0908440 | 0.921544 | 3.122054e-88 | -8.615850e-47 |
| Msa0268270 | Msa0908440 | 0.882253 | 1.216081e-70 | -8.615850e-47 |
| Msa0268300 | Msa0908440 | 0.881612 | 2.076735e-70 | -8.615850e-47 |
| Msa0268310 | Msa0908440 | 0.879521 | 1.164199e-69 | -8.615850e-47 |
| Msa0268390 | Msa0908440 | 0.831363 | 1.741683e-55 | -8.615850e-47 |
| Msa0268400 | Msa0908440 | 0.810078 | 1.378538e-50 | -8.615850e-47 |
| Msa0268410 | Msa0908440 | 0.840053 | 1.096051e-57 | -8.615850e-47 |
| Msa0268550 | Msa0908440 | 0.832375 | 9.799762e-56 | -8.615850e-47 |
| Msa0268560 | Msa0908440 | 0.838692 | 2.473287e-57 | -8.615850e-47 |
| Msa0268570 | Msa0908440 | 0.816811 | 4.560737e-52 | -8.615850e-47 |
| Msa0268580 | Msa0908440 | 0.830367 | 3.056917e-55 | -8.615850e-47 |
| Msa0268630 | Msa0908440 | 0.821845 | 3.251084e-53 | -8.615850e-47 |
| Msa0268640 | Msa0908440 | 0.830594 | 2.689907e-55 | -8.615850e-47 |
| Msa0268740 | Msa0908440 | 0.846633 | 1.921605e-59 | -8.615850e-47 |
| Msa0268750 | Msa0908440 | 0.822519 | 2.268049e-53 | -8.615850e-47 |
| Msa0268760 | Msa0908440 | 0.815694 | 8.108398e-52 | -8.615850e-47 |
| Msa0268830 | Msa0908440 | 0.845167 | 4.808824e-59 | -8.615850e-47 |
| Msa0268840 | Msa0908440 | 0.828585 | 8.286116e-55 | -8.615850e-47 |
| Msa0268940 | Msa0908440 | 0.820287 | 7.427392e-53 | -8.615850e-47 |
| Msa0268950 | Msa0908440 | 0.830010 | 3.735375e-55 | -8.615850e-47 |
| Msa0268960 | Msa0908440 | 0.840510 | 8.323753e-58 | -8.615850e-47 |
| Msa0269040 | Msa0908440 | 0.852337 | 4.931343e-61 | -8.615850e-47 |
| Msa0269050 | Msa0908440 | 0.840608 | 7.846464e-58 | -8.615850e-47 |
| Msa0269130 | Msa0908440 | 0.835333 | 1.783461e-56 | -8.615850e-47 |
| Msa0269140 | Msa0908440 | 0.928496 | 2.659993e-92 | -8.615850e-47 |
| Msa0269150 | Msa0908440 | 0.897922 | 8.780328e-77 | -8.615850e-47 |
| Msa0344180 | Msa0908440 | 0.813316 | 2.721863e-51 | -8.615850e-47 |
| Msa0344190 | Msa0908440 | 0.824701 | 6.998410e-54 | -8.615850e-47 |
| Msa0344300 | Msa0908440 | 0.801195 | 1.009811e-48 | -8.615850e-47 |
| Msa0344310 | Msa0908440 | 0.844834 | 5.914452e-59 | -8.615850e-47 |
| Msa0582510 | Msa0908440 | 0.847004 | 1.520682e-59 | -8.615850e-47 |
| Msa0582520 | Msa0908440 | 0.812176 | 4.837514e-51 | -8.615850e-47 |
| Msa0582630 | Msa0908440 | 0.842392 | 2.659513e-58 | -8.615850e-47 |
| Msa0582640 | Msa0908440 | 0.852794 | 3.653630e-61 | -8.615850e-47 |
| Msa0582650 | Msa0908440 | 0.816709 | 4.809238e-52 | -8.615850e-47 |
| Msa0582660 | Msa0908440 | 0.826872 | 2.137643e-54 | -8.615850e-47 |
| Msa0582690 | Msa0908440 | 0.850483 | 1.649044e-60 | -8.615850e-47 |
| Msa0582700 | Msa0908440 | 0.829447 | 5.120500e-55 | -8.615850e-47 |
| Msa0582750 | Msa0908440 | 0.840256 | 9.702897e-58 | -8.615850e-47 |
| Msa0582760 | Msa0908440 | 0.844168 | 8.932409e-59 | -8.615850e-47 |
| Msa0582770 | Msa0908440 | 0.812610 | 3.887646e-51 | -8.615850e-47 |
| Msa0582780 | Msa0908440 | 0.832664 | 8.307863e-56 | -8.615850e-47 |
| Msa0582810 | Msa0908440 | 0.849603 | 2.908749e-60 | -8.615850e-47 |
| Msa0582820 | Msa0908440 | 0.823815 | 1.130239e-53 | -8.615850e-47 |
| Msa0582910 | Msa0908440 | 0.849244 | 3.662247e-60 | -8.615850e-47 |
| Msa0582920 | Msa0908440 | 0.820130 | 8.070776e-53 | -8.615850e-47 |
| Msa0582930 | Msa0908440 | 0.831345 | 1.760056e-55 | -8.615850e-47 |
| Msa0591290 | Msa0908440 | 0.851074 | 1.124226e-60 | -8.615850e-47 |
| Msa0591310 | Msa0908440 | 0.855868 | 4.727007e-62 | -8.615850e-47 |
| Msa0591350 | Msa0908440 | 0.903694 | 2.661102e-79 | -8.615850e-47 |
| Msa0591360 | Msa0908440 | 0.828200 | 1.025993e-54 | -8.615850e-47 |
| Msa0591380 | Msa0908440 | 0.823491 | 1.346107e-53 | -8.615850e-47 |
| Msa0867680 | Msa0908440 | 0.906509 | 1.375518e-80 | -8.615850e-47 |
| Msa0867690 | Msa0908440 | 0.861379 | 1.069701e-63 | -8.615850e-47 |
| Msa0876520 | Msa0908440 | 0.808939 | 2.420594e-50 | -8.615850e-47 |
| Msa0908220 | Msa0908440 | 0.862309 | 5.553829e-64 | -8.615850e-47 |
| Msa0908230 | Msa0908440 | 0.943807 | 6.169854e-103 | -8.615850e-47 |
| Msa0908240 | Msa0908440 | 0.874097 | 8.812338e-68 | -8.615850e-47 |
| Msa0908310 | Msa0908440 | 0.907021 | 7.945968e-81 | -8.615850e-47 |
| Msa0908320 | Msa0908440 | 0.852657 | 3.998849e-61 | -8.615850e-47 |
| Msa0908370 | Msa0908440 | 0.910847 | 1.184880e-82 | -8.615850e-47 |
| Msa0908380 | Msa0908440 | 0.833825 | 4.269276e-56 | -8.615850e-47 |
| Msa0908430 | Msa0908440 | 0.851303 | 9.690991e-61 | -8.615850e-47 |
| Msa0908440 | Msa0908450 | 0.905850 | 2.773936e-80 | -8.615850e-47 |
| Msa0908440 | Msa0908480 | 0.829404 | 5.245540e-55 | -8.615850e-47 |
| Msa0908440 | Msa0908530 | 0.932034 | 1.559435e-94 | -8.615850e-47 |
| Msa0908440 | Msa0908540 | 0.884013 | 2.754299e-71 | -8.615850e-47 |
| Msa0908440 | Msa0908590 | 0.868910 | 4.594806e-66 | -8.615850e-47 |
| Msa0908440 | Msa0908600 | 0.933711 | 1.236435e-95 | -8.615850e-47 |
| Msa0908440 | Msa0908610 | 0.854685 | 1.043749e-61 | -8.615850e-47 |
| Msa0908440 | Msa0908650 | 0.861512 | 9.740383e-64 | -8.615850e-47 |
| Msa0908440 | Msa0908660 | 0.935997 | 3.506512e-97 | -8.615850e-47 |
| Msa0908440 | Msa0908670 | 0.902733 | 7.165325e-79 | -8.615850e-47 |
| Msa0908440 | Msa0908720 | 0.905331 | 4.807746e-80 | -8.615850e-47 |
| Msa0908440 | Msa0908730 | 0.856287 | 3.561468e-62 | -8.615850e-47 |
| Msa0908440 | Msa0911190 | 0.868131 | 8.200703e-66 | -8.615850e-47 |
| Msa0908440 | Msa0911200 | 0.846227 | 2.478794e-59 | -8.615850e-47 |
| Msa0908440 | Msa0911230 | 0.825261 | 5.161393e-54 | -8.615850e-47 |
| Msa0908440 | Msa0924830 | 0.825685 | 4.096590e-54 | -8.615850e-47 |
| Msa0908440 | Msa0924870 | 0.814887 | 1.225618e-51 | -8.615850e-47 |
| Msa0908440 | Msa0924880 | 0.810043 | 1.402594e-50 | -8.615850e-47 |
| Msa0908440 | Msa0924930 | 0.889549 | 2.193686e-73 | -8.615850e-47 |
| Msa0908440 | Msa0924940 | 0.857018 | 2.172317e-62 | -8.615850e-47 |
| Msa0908440 | Msa0925100 | 0.887765 | 1.070131e-72 | -8.615850e-47 |
| Msa0908440 | Msa0925110 | 0.867166 | 1.672147e-65 | -8.615850e-47 |
| Msa0908440 | Msa0931070 | 0.831554 | 1.563355e-55 | -8.615850e-47 |
| Msa0908440 | Msa0931080 | 0.820693 | 5.995360e-53 | -8.615850e-47 |
| Msa0908440 | Msa0931130 | 0.840766 | 7.135566e-58 | -8.615850e-47 |
| Msa0908440 | Msa0931140 | 0.818235 | 2.178804e-52 | -8.615850e-47 |
| Msa0908440 | Msa0931220 | 0.821923 | 3.118531e-53 | -8.615850e-47 |
| Msa0908440 | Msa0931240 | 0.825993 | 3.461508e-54 | -8.615850e-47 |
| Msa0908440 | Msa0931260 | 0.858585 | 7.448676e-63 | -8.615850e-47 |
| Msa0908440 | Msa0931270 | 0.831072 | 2.053015e-55 | -8.615850e-47 |
| Msa0908440 | Msa0983630 | 0.916471 | 1.710853e-85 | -8.615850e-47 |
| Msa0908440 | Msa0983640 | 0.862708 | 4.185209e-64 | -8.615850e-47 |
| Msa0908440 | Msa0983720 | 0.808017 | 3.808587e-50 | -8.615850e-47 |
| Msa0908440 | Msa1022050 | 0.896920 | 2.319914e-76 | -8.615850e-47 |
| Msa0908440 | Msa1022060 | 0.846223 | 2.485521e-59 | -8.615850e-47 |
| Msa0908440 | Msa1064410 | 0.842581 | 2.369361e-58 | -8.615850e-47 |
| Msa0908440 | Msa1086070 | 0.823098 | 1.663041e-53 | -8.615850e-47 |
| Msa0908440 | Msa1086080 | 0.829702 | 4.441433e-55 | -8.615850e-47 |
| Msa0908440 | Msa1086090 | 0.830554 | 2.751186e-55 | -8.615850e-47 |
| Msa0908440 | Msa1086100 | 0.822259 | 2.606103e-53 | -8.615850e-47 |
| Msa0908440 | Msa1086140 | 0.837005 | 6.708465e-57 | -8.615850e-47 |
| Msa0908440 | Msa1086150 | 0.817539 | 3.129830e-52 | -8.615850e-47 |
| Msa0908440 | Msa1086180 | 0.816361 | 5.753883e-52 | -8.615850e-47 |
| Msa0908440 | Msa1086190 | 0.840048 | 1.099572e-57 | -8.615850e-47 |
| Msa0908440 | Msa1086200 | 0.831460 | 1.648399e-55 | -8.615850e-47 |
| Msa0908440 | Msa1086210 | 0.824628 | 7.283108e-54 | -8.615850e-47 |
| Msa0908440 | Msa1086250 | 0.804757 | 1.853413e-49 | -8.615850e-47 |
| Msa0908440 | Msa1086270 | 0.822704 | 2.054050e-53 | -8.615850e-47 |
| Msa0908440 | Msa1086280 | 0.814915 | 1.207968e-51 | -8.615850e-47 |
| Msa0908440 | Msa1086360 | 0.802972 | 4.353273e-49 | -8.615850e-47 |
| Msa0908440 | Msa1086380 | 0.827883 | 1.222973e-54 | -8.615850e-47 |
| Msa0908440 | Msa1086430 | 0.803150 | 3.999793e-49 | -8.615850e-47 |
| Msa0908440 | Msa1086450 | 0.817938 | 2.543802e-52 | -8.615850e-47 |
| Msa0908440 | Msa1086470 | 0.822153 | 2.757956e-53 | -8.615850e-47 |
| Msa0908440 | Msa1086550 | 0.834003 | 3.852734e-56 | -8.615850e-47 |
| Msa0908440 | Msa1086560 | 0.845679 | 3.493524e-59 | -8.615850e-47 |
| Msa0908440 | Msa1086590 | 0.884557 | 1.732689e-71 | -8.615850e-47 |
| Msa0908440 | Msa1086600 | 0.871235 | 7.975720e-67 | -8.615850e-47 |
| Msa0908440 | Msa1086720 | 0.871842 | 5.019982e-67 | -8.615850e-47 |
| Msa0908440 | Msa1086730 | 0.922000 | 1.735369e-88 | -8.615850e-47 |
| Msa0908440 | Msa1086740 | 0.876312 | 1.543145e-68 | -8.615850e-47 |
| Msa0908440 | Msa1086790 | 0.907281 | 6.005766e-81 | -8.615850e-47 |
| Msa0908440 | Msa1086800 | 0.866584 | 2.561981e-65 | -8.615850e-47 |
| Msa0908440 | Msa1086880 | 0.828852 | 7.140501e-55 | -8.615850e-47 |
| Msa0908440 | Msa1086890 | 0.833386 | 5.495865e-56 | -8.615850e-47 |
| Msa0908440 | Msa1086900 | 0.821368 | 4.190261e-53 | -8.615850e-47 |
| Msa0908440 | Msa1086910 | 0.811550 | 6.621042e-51 | -8.615850e-47 |
| Msa0908440 | Msa1086960 | 0.899831 | 1.341387e-77 | -8.615850e-47 |
| Msa0908440 | Msa1086970 | 0.859184 | 4.929314e-63 | -8.615850e-47 |
| Msa0908440 | Msa1087030 | 0.852331 | 4.952832e-61 | -8.615850e-47 |
| Msa0908440 | Msa1087040 | 0.907694 | 3.840116e-81 | -8.615850e-47 |
| Msa0908440 | Msa1087050 | 0.887885 | 9.627037e-73 | -8.615850e-47 |
| Msa0908440 | Msa1087110 | 0.904605 | 1.031139e-79 | -8.615850e-47 |
| Msa0908440 | Msa1087120 | 0.851153 | 1.068213e-60 | -8.615850e-47 |
| Msa0908440 | Msa1143120 | 0.837674 | 4.523072e-57 | -8.615850e-47 |
| Msa0908440 | Msa1143130 | 0.808840 | 2.541397e-50 | -8.615850e-47 |
| Msa0908440 | Msa1143160 | 0.831983 | 1.224777e-55 | -8.615850e-47 |
| Msa0908440 | Msa1143170 | 0.816534 | 5.264088e-52 | -8.615850e-47 |
| Msa0908440 | Msa1143180 | 0.828906 | 6.930092e-55 | -8.615850e-47 |
| Msa0908440 | Msa1305090 | 0.854029 | 1.615430e-61 | -8.615850e-47 |
| Msa0908440 | Msa1354420 | 0.925825 | 1.084942e-90 | -8.615850e-47 |
| Msa0908440 | Msa1354430 | 0.855233 | 7.237383e-62 | -8.615850e-47 |
| Msa0908440 | Msa1354480 | 0.865096 | 7.566917e-65 | -8.615850e-47 |
| Msa0908440 | Msa1354490 | 0.927285 | 1.454397e-91 | -8.615850e-47 |
| Msa0908440 | Msa1354500 | 0.887651 | 1.183722e-72 | -8.615850e-47 |
| Msa0908440 | Msa1354550 | 0.928240 | 3.818598e-92 | -8.615850e-47 |
| Msa0908440 | Msa1354560 | 0.849234 | 3.684891e-60 | -8.615850e-47 |
| Msa0908440 | Msa1354610 | 0.871718 | 5.521219e-67 | -8.615850e-47 |
| Msa0908440 | Msa1354620 | 0.944038 | 4.050619e-103 | -8.615850e-47 |
| Msa0908440 | Msa1354630 | 0.887127 | 1.874301e-72 | -8.615850e-47 |
| Msa0908440 | Msa1354680 | 0.875002 | 4.340333e-68 | -8.615850e-47 |
| Msa0908440 | Msa1354690 | 0.924314 | 8.308073e-90 | -8.615850e-47 |
| Msa0908440 | Msa1354700 | 0.839680 | 1.370867e-57 | -8.615850e-47 |
| Msa0908440 | Msa1354740 | 0.860060 | 2.687874e-63 | -8.615850e-47 |
| Msa0908440 | Msa1354750 | 0.930049 | 2.881053e-93 | -8.615850e-47 |
| Msa0908440 | Msa1354760 | 0.885648 | 6.781497e-72 | -8.615850e-47 |
| Msa0908440 | Msa1354810 | 0.933108 | 3.097690e-95 | -8.615850e-47 |
| Msa0908440 | Msa1354820 | 0.867862 | 1.000433e-65 | -8.615850e-47 |
| Msa0908440 | Msa1354900 | 0.823883 | 1.089768e-53 | -8.615850e-47 |
| Msa0908440 | Msa1354910 | 0.827563 | 1.460136e-54 | -8.615850e-47 |
| Msa0908440 | Msa1354920 | 0.826006 | 3.437536e-54 | -8.615850e-47 |
| Msa0908440 | Msa1354930 | 0.827532 | 1.485692e-54 | -8.615850e-47 |
| Msa0908440 | Msa1354980 | 0.932862 | 4.496762e-95 | -8.615850e-47 |
| Msa0908440 | Msa1354990 | 0.864808 | 9.314130e-65 | -8.615850e-47 |
| Msa0908440 | Msa1355070 | 0.810717 | 1.003057e-50 | -8.615850e-47 |
| Msa0908440 | Msa1355080 | 0.827727 | 1.333847e-54 | -8.615850e-47 |
| Msa0908440 | Msa1355090 | 0.824353 | 8.452755e-54 | -8.615850e-47 |
| Msa0908440 | Msa1355100 | 0.822861 | 1.888284e-53 | -8.615850e-47 |
| Msa0908440 | Msa1365890 | 0.907134 | 7.033119e-81 | -8.615850e-47 |
| Msa0908440 | Msa1365900 | 0.851160 | 1.063563e-60 | -8.615850e-47 |
| Msa0908440 | Msa1365950 | 0.863959 | 1.714467e-64 | -8.615850e-47 |
| Msa0908440 | Msa1365960 | 0.886809 | 2.475410e-72 | -8.615850e-47 |
| Msa0908440 | Msa1365970 | 0.875128 | 3.932435e-68 | -8.615850e-47 |
| Msa0908440 | Msa1366080 | 0.926947 | 2.325244e-91 | -8.615850e-47 |
| Msa0908440 | Msa1366090 | 0.840437 | 8.703017e-58 | -8.615850e-47 |
| Msa0908440 | Msa1368230 | 0.920925 | 6.896610e-88 | -8.615850e-47 |
| Msa0908440 | Msa1368240 | 0.867736 | 1.098074e-65 | -8.615850e-47 |
| Msa0908440 | Msa1380590 | 0.816598 | 5.093180e-52 | -8.615850e-47 |
| Msa0908440 | Msa1380600 | 0.820128 | 8.077159e-53 | -8.615850e-47 |
| Msa0908440 | Msa1380620 | 0.833153 | 6.280370e-56 | -8.615850e-47 |
| Msa0908440 | Msa1380680 | 0.819501 | 1.123595e-52 | -8.615850e-47 |
| Msa0908440 | Msa1380690 | 0.812802 | 3.529399e-51 | -8.615850e-47 |
| Msa0908440 | Msa1385410 | 0.903895 | 2.159679e-79 | -8.615850e-47 |
| Msa0908440 | Msa1385420 | 0.828521 | 8.583784e-55 | -8.615850e-47 |
| Msa0908440 | Msa1391090 | 0.872368 | 3.355999e-67 | -8.615850e-47 |
| Msa0908440 | Msa1391100 | 0.922311 | 1.159774e-88 | -8.615850e-47 |
| Msa0908440 | Msa1391110 | 0.871868 | 4.923241e-67 | -8.615850e-47 |
| Msa0908440 | Msa1391160 | 0.910310 | 2.160988e-82 | -8.615850e-47 |
| Msa0908440 | Msa1391170 | 0.846480 | 2.115013e-59 | -8.615850e-47 |
| Msa0908440 | Msa1391220 | 0.871736 | 5.446439e-67 | -8.615850e-47 |
| Msa0908440 | Msa1391230 | 0.915491 | 5.524300e-85 | -8.615850e-47 |
| Msa0908440 | Msa1391240 | 0.877230 | 7.422322e-69 | -8.615850e-47 |
| Msa0908440 | Msa1394030 | 0.825335 | 4.958460e-54 | -8.615850e-47 |
| Msa0908440 | Msa1394040 | 0.848639 | 5.390770e-60 | -8.615850e-47 |
| Msa0908440 | Msa1394150 | 0.846357 | 2.285529e-59 | -8.615850e-47 |
| Msa0908440 | Msa1394160 | 0.826098 | 3.268746e-54 | -8.615850e-47 |
| Msa0908440 | Msa1394210 | 0.826192 | 3.104050e-54 | -8.615850e-47 |
| Msa0908440 | Msa1394230 | 0.808174 | 3.525674e-50 | -8.615850e-47 |
| Msa0908440 | Msa1460120 | 0.847579 | 1.057427e-59 | -8.615850e-47 |
| Msa0908440 | Msa1460130 | 0.856993 | 2.209481e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908440 | MtrunA17_CPg0492421 | 92.994 | 157 | 9 | 1 | 1 | 155 | 1 | 157 | 3.39e-104 | 294 |
| Msa0908440 | MtrunA17_Chr4g0016101 | 92.994 | 157 | 9 | 1 | 1 | 155 | 1 | 157 | 3.39e-104 | 294 |
| Msa0908440 | MtrunA17_Chr3g0090841 | 92.994 | 157 | 9 | 1 | 1 | 155 | 1 | 157 | 3.39e-104 | 294 |
| Msa0908440 | MtrunA17_Chr4g0002541 | 83.333 | 60 | 10 | 0 | 25 | 84 | 1 | 60 | 7.63e-30 | 103 |
| Msa0908440 | MtrunA17_Chr4g0057401 | 87.500 | 40 | 5 | 0 | 116 | 155 | 1 | 40 | 2.03e-17 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908440 | ATCG00900.1 | 95.484 | 155 | 7 | 0 | 1 | 155 | 1 | 155 | 3.40e-109 | 307 |
| Msa0908440 | ATCG01240.1 | 95.484 | 155 | 7 | 0 | 1 | 155 | 1 | 155 | 3.40e-109 | 307 |
| Msa0908440 | ATMG01270.1 | 33.571 | 140 | 83 | 3 | 22 | 155 | 11 | 146 | 1.72e-18 | 77.4 |
| Msa0908440 | AT2G07696.1 | 33.571 | 140 | 83 | 3 | 22 | 155 | 11 | 146 | 1.72e-18 | 77.4 |
Find 29 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAATCGATTACGATAAAT+TGG | 0.238141 | 6_2:+9606652 | None:intergenic |
| CTTGCCATTCGTTGGTTATT+AGG | 0.268444 | 6_2:-9606403 | Msa0908440:CDS |
| CATCAAGTTCCCGTTGAAAT+AGG | 0.307921 | 6_2:-9606445 | Msa0908440:CDS |
| AAAACGTCCAGGTCGAAATA+TGG | 0.317789 | 6_2:-9606371 | Msa0908440:CDS |
| CAAATTAAGTTCCGAATTAG+TGG | 0.342047 | 6_2:-9606344 | Msa0908440:CDS |
| TGGCGATGCCATACGCAAAA+AGG | 0.366109 | 6_2:-9606305 | Msa0908440:CDS |
| TTTGGCAGCATCCACTAATT+CGG | 0.404543 | 6_2:+9606333 | None:intergenic |
| ACGTATTGCTTGACGTAAAA+CGG | 0.405511 | 6_2:+9606519 | None:intergenic |
| GCTTGACGTAAAACGGATAG+TGG | 0.418362 | 6_2:+9606526 | None:intergenic |
| GTAAAAGCAAGACGCGTAAA+CGG | 0.427761 | 6_2:-9606475 | Msa0908440:CDS |
| TATGGCATCGCCATTCCCTT+TGG | 0.436234 | 6_2:+9606315 | None:intergenic |
| TGTGTGGATCCTATTTCAAC+GGG | 0.470768 | 6_2:+9606436 | None:intergenic |
| TTATCTATCGAGCTATGAAA+AGG | 0.512086 | 6_2:-9606573 | Msa0908440:CDS |
| GAAAAGCACTTGCCATTCGT+TGG | 0.526859 | 6_2:-9606411 | Msa0908440:CDS |
| GTGGATGCTGCCAAAGGGAA+TGG | 0.532446 | 6_2:-9606325 | Msa0908440:CDS |
| TAATCGATTAGTTAACATGT+TGG | 0.538486 | 6_2:-9606641 | Msa0908440:CDS |
| GGCGCATCCCGAAAACGTCC+AGG | 0.540732 | 6_2:-9606382 | Msa0908440:CDS |
| AAAGGAAGAGACTCATAGAA+TGG | 0.548096 | 6_2:-9606287 | Msa0908440:CDS |
| TTGTGTGGATCCTATTTCAA+CGG | 0.548545 | 6_2:+9606435 | None:intergenic |
| AATTAGTGGATGCTGCCAAA+GGG | 0.575951 | 6_2:-9606330 | Msa0908440:CDS |
| GAATTAGTGGATGCTGCCAA+AGG | 0.584526 | 6_2:-9606331 | Msa0908440:CDS |
| AGAGACTCATAGAATGGCAG+AGG | 0.593635 | 6_2:-9606281 | Msa0908440:CDS |
| TTGAAAGCCATATTTCGACC+TGG | 0.605724 | 6_2:+9606364 | None:intergenic |
| TGCGCCTAATAACCAACGAA+TGG | 0.620213 | 6_2:+9606399 | None:intergenic |
| TCGATTACGATAAATTGGAT+CGG | 0.627987 | 6_2:+9606657 | None:intergenic |
| GTTAACCGTATTATGAAACA+CGG | 0.650772 | 6_2:-9606619 | Msa0908440:CDS |
| TTTACGCTCATGTCACGGCG+AGG | 0.672550 | 6_2:-9606706 | None:intergenic |
| TTTACGTCAAGCAATACGTG+GGG | 0.715577 | 6_2:-9606515 | Msa0908440:CDS |
| GTTGAAATAGGATCCACACA+AGG | 0.731975 | 6_2:-9606433 | Msa0908440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACTAATCGATTACGATAAAT+TGG | + | chr6_2:9606300-9606319 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | - | chr6_2:9606308-9606327 | Msa0908440:CDS | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | + | chr6_2:9606338-9606357 | None:intergenic | 25.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | + | chr6_2:9606286-9606305 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | + | chr6_2:9606295-9606314 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | - | chr6_2:9606330-9606349 | Msa0908440:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | - | chr6_2:9606344-9606363 | Msa0908440:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | - | chr6_2:9606376-9606395 | Msa0908440:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | + | chr6_2:9606466-9606485 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | - | chr6_2:9606605-9606624 | Msa0908440:CDS | 30.0% | |
| ACGTATTGCTTGACGTAAAA+CGG | + | chr6_2:9606433-9606452 | None:intergenic | 35.0% | |
| ! | TTTTACGTCAAGCAATACGT+GGG | - | chr6_2:9606433-9606452 | Msa0908440:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | + | chr6_2:9606465-9606484 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | + | chr6_2:9606517-9606536 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | - | chr6_2:9606662-9606681 | Msa0908440:CDS | 35.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | - | chr6_2:9606432-9606451 | Msa0908440:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | - | chr6_2:9606434-9606453 | Msa0908440:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | - | chr6_2:9606474-9606493 | Msa0908440:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | - | chr6_2:9606504-9606523 | Msa0908440:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | + | chr6_2:9606516-9606535 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | - | chr6_2:9606516-9606535 | Msa0908440:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | - | chr6_2:9606546-9606565 | Msa0908440:CDS | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | + | chr6_2:9606578-9606597 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | - | chr6_2:9606578-9606597 | Msa0908440:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | + | chr6_2:9606588-9606607 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | + | chr6_2:9606619-9606638 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | - | chr6_2:9606619-9606638 | Msa0908440:CDS | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | + | chr6_2:9606655-9606674 | None:intergenic | 40.0% |
| GCTTGACGTAAAACGGATAG+TGG | + | chr6_2:9606426-9606445 | None:intergenic | 45.0% | |
| !! | GAAAAGCACTTGCCATTCGT+TGG | - | chr6_2:9606538-9606557 | Msa0908440:CDS | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | + | chr6_2:9606553-9606572 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | + | chr6_2:9606577-9606596 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | - | chr6_2:9606618-9606637 | Msa0908440:CDS | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | - | chr6_2:9606668-9606687 | Msa0908440:CDS | 45.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | + | chr6_2:9606532-9606551 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | + | chr6_2:9606637-9606656 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | - | chr6_2:9606644-9606663 | Msa0908440:CDS | 50.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | - | chr6_2:9606624-9606643 | Msa0908440:CDS | 55.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | - | chr6_2:9606567-9606586 | Msa0908440:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 9606252 | 9606719 | 9606252 | ID=Msa0908440;Name=Msa0908440 |
| chr6_2 | mRNA | 9606252 | 9606719 | 9606252 | ID=Msa0908440-mRNA-1;Parent=Msa0908440;Name=Msa0908440-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|155 |
| chr6_2 | exon | 9606252 | 9606719 | 9606252 | ID=Msa0908440-mRNA-1:exon:2341;Parent=Msa0908440-mRNA-1 |
| chr6_2 | CDS | 9606252 | 9606719 | 9606252 | ID=Msa0908440-mRNA-1:cds;Parent=Msa0908440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
