AlfalfaGEDB | Msa1391230

M. sativa cultivar zhongmu-4 / Msa1391230

KEGG: K02992
GO: GO:0000028 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009579 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042274 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00177.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1391230	YP_009141653.1	100.000	131	0	0	1	131	25	155	1.21e-90	269

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1391230	sp\|P07135\|RR7_SOYBN	96.947	131	4	0	1	131	25	155	1.13e-90	262

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1391230	A0A0F6NLW0	100.000	131	0	0	1	131	25	155	5.78e-91	269

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0095190	Msa1391230	0.800315	1.526804e-48	-8.615850e-47
Msa1354420	Msa1391230	0.888152	7.606421e-73	-8.615850e-47
Msa1354430	Msa1391230	0.838009	3.708530e-57	-8.615850e-47
Msa1354480	Msa1391230	0.847977	8.217621e-60	-8.615850e-47
Msa1354490	Msa1391230	0.905237	5.304795e-80	-8.615850e-47
Msa1354500	Msa1391230	0.840348	9.177563e-58	-8.615850e-47
Msa1354550	Msa1391230	0.887246	1.688685e-72	-8.615850e-47
Msa1354560	Msa1391230	0.838646	2.541294e-57	-8.615850e-47
Msa1354610	Msa1391230	0.852171	5.499162e-61	-8.615850e-47
Msa1354620	Msa1391230	0.910796	1.254546e-82	-8.615850e-47
Msa1354630	Msa1391230	0.841556	4.422563e-58	-8.615850e-47
Msa1354680	Msa1391230	0.828705	7.747306e-55	-8.615850e-47
Msa1354690	Msa1391230	0.900699	5.639284e-78	-8.615850e-47
Msa1354700	Msa1391230	0.842556	2.405926e-58	-8.615850e-47
Msa1354740	Msa1391230	0.837114	6.289904e-57	-8.615850e-47
Msa1354750	Msa1391230	0.910709	1.382054e-82	-8.615850e-47
Msa1354760	Msa1391230	0.829872	4.037316e-55	-8.615850e-47
Msa1354810	Msa1391230	0.870324	1.590061e-66	-8.615850e-47
Msa1354820	Msa1391230	0.839003	2.054148e-57	-8.615850e-47
Msa1354900	Msa1391230	0.831432	1.674971e-55	-8.615850e-47
Msa1354910	Msa1391230	0.817367	3.421752e-52	-8.615850e-47
Msa1354930	Msa1391230	0.822134	2.786819e-53	-8.615850e-47
Msa1354980	Msa1391230	0.875494	2.948932e-68	-8.615850e-47
Msa1354990	Msa1391230	0.850064	2.162138e-60	-8.615850e-47
Msa1355070	Msa1391230	0.814858	1.243633e-51	-8.615850e-47
Msa1355080	Msa1391230	0.818697	1.711923e-52	-8.615850e-47
Msa1355100	Msa1391230	0.816742	4.728350e-52	-8.615850e-47
Msa1365890	Msa1391230	0.859358	4.370775e-63	-8.615850e-47
Msa1365900	Msa1391230	0.855599	5.662237e-62	-8.615850e-47
Msa1365950	Msa1391230	0.842916	1.929884e-58	-8.615850e-47
Msa1365960	Msa1391230	0.909933	3.290680e-82	-8.615850e-47
Msa1365970	Msa1391230	0.858003	1.109873e-62	-8.615850e-47
Msa1366080	Msa1391230	0.874557	6.154541e-68	-8.615850e-47
Msa1366090	Msa1391230	0.828814	7.294809e-55	-8.615850e-47
Msa1368230	Msa1391230	0.893134	8.335008e-75	-8.615850e-47
Msa1368240	Msa1391230	0.820924	5.304329e-53	-8.615850e-47
Msa1368290	Msa1391230	0.807085	6.003373e-50	-8.615850e-47
Msa1380590	Msa1391230	0.807534	4.821973e-50	-8.615850e-47
Msa1380600	Msa1391230	0.816080	6.648305e-52	-8.615850e-47
Msa1380620	Msa1391230	0.815641	8.330719e-52	-8.615850e-47
Msa1380680	Msa1391230	0.808819	2.567969e-50	-8.615850e-47
Msa1380690	Msa1391230	0.803306	3.712586e-49	-8.615850e-47
Msa1385410	Msa1391230	0.863479	2.417140e-64	-8.615850e-47
Msa1385420	Msa1391230	0.819671	1.027346e-52	-8.615850e-47
Msa1391090	Msa1391230	0.857278	1.819711e-62	-8.615850e-47
Msa1391100	Msa1391230	0.920409	1.327109e-87	-8.615850e-47
Msa1391110	Msa1391230	0.836213	1.067424e-56	-8.615850e-47
Msa1391160	Msa1391230	0.868199	7.799145e-66	-8.615850e-47
Msa1391170	Msa1391230	0.846238	2.463044e-59	-8.615850e-47
Msa1391220	Msa1391230	0.859306	4.530381e-63	-8.615850e-47
Msa1391230	Msa1391240	0.846145	2.610681e-59	-8.615850e-47
Msa1391230	Msa1394040	0.828702	7.763419e-55	-8.615850e-47
Msa1391230	Msa1394150	0.814124	1.807405e-51	-8.615850e-47
Msa1391230	Msa1394170	0.800714	1.265937e-48	-8.615850e-47
Msa1391230	Msa1394210	0.805664	1.196856e-49	-8.615850e-47
Msa1391230	Msa1394220	0.805953	1.040541e-49	-8.615850e-47
Msa1391230	Msa1460120	0.832336	1.001921e-55	-8.615850e-47
Msa1391230	Msa1460130	0.846488	2.104748e-59	-8.615850e-47
Msa0727020	Msa1391230	0.804416	2.182844e-49	-8.615850e-47
Msa0202640	Msa1391230	0.815123	1.086202e-51	-8.615850e-47
Msa1305090	Msa1391230	0.843177	1.644811e-58	-8.615850e-47
Msa0370210	Msa1391230	0.818080	2.361882e-52	-8.615850e-47
Msa0398630	Msa1391230	0.804766	1.845493e-49	-8.615850e-47
Msa0405420	Msa1391230	0.829628	4.628202e-55	-8.615850e-47
Msa0405430	Msa1391230	0.873413	1.499495e-67	-8.615850e-47
Msa0405440	Msa1391230	0.813846	2.081962e-51	-8.615850e-47
Msa0405510	Msa1391230	0.844462	7.448788e-59	-8.615850e-47
Msa0405520	Msa1391230	0.871058	9.121737e-67	-8.615850e-47
Msa0405530	Msa1391230	0.811835	5.737689e-51	-8.615850e-47
Msa0983630	Msa1391230	0.870615	1.276935e-66	-8.615850e-47
Msa0983640	Msa1391230	0.847528	1.092365e-59	-8.615850e-47
Msa0983720	Msa1391230	0.805563	1.256919e-49	-8.615850e-47
Msa1022050	Msa1391230	0.871745	5.406774e-67	-8.615850e-47
Msa1022060	Msa1391230	0.824272	8.831228e-54	-8.615850e-47
Msa1064410	Msa1391230	0.820466	6.758286e-53	-8.615850e-47
Msa1086070	Msa1391230	0.810843	9.424311e-51	-8.615850e-47
Msa1086080	Msa1391230	0.818328	2.076288e-52	-8.615850e-47
Msa1086100	Msa1391230	0.818418	1.980234e-52	-8.615850e-47
Msa1086140	Msa1391230	0.827783	1.292839e-54	-8.615850e-47
Msa1086180	Msa1391230	0.804916	1.717056e-49	-8.615850e-47
Msa1086190	Msa1391230	0.815485	9.026185e-52	-8.615850e-47
Msa1086210	Msa1391230	0.816650	4.956602e-52	-8.615850e-47
Msa1086260	Msa1391230	0.802058	6.717645e-49	-8.615850e-47
Msa1086270	Msa1391230	0.805048	1.610730e-49	-8.615850e-47
Msa1086380	Msa1391230	0.806123	9.584762e-50	-8.615850e-47
Msa1086450	Msa1391230	0.805751	1.147578e-49	-8.615850e-47
Msa1086550	Msa1391230	0.833282	5.831179e-56	-8.615850e-47
Msa1086560	Msa1391230	0.835268	1.852742e-56	-8.615850e-47
Msa1086590	Msa1391230	0.886683	2.763990e-72	-8.615850e-47
Msa1086600	Msa1391230	0.841470	4.661688e-58	-8.615850e-47
Msa1086720	Msa1391230	0.839368	1.652348e-57	-8.615850e-47
Msa1086730	Msa1391230	0.887323	1.578770e-72	-8.615850e-47
Msa1086740	Msa1391230	0.840328	9.291701e-58	-8.615850e-47
Msa1086790	Msa1391230	0.874065	9.034019e-68	-8.615850e-47
Msa1086800	Msa1391230	0.860012	2.777497e-63	-8.615850e-47
Msa1086880	Msa1391230	0.810487	1.124893e-50	-8.615850e-47
Msa1086890	Msa1391230	0.809758	1.615034e-50	-8.615850e-47
Msa1086910	Msa1391230	0.814921	1.204112e-51	-8.615850e-47
Msa1086960	Msa1391230	0.849757	2.634525e-60	-8.615850e-47
Msa1086970	Msa1391230	0.847252	1.300439e-59	-8.615850e-47
Msa1087030	Msa1391230	0.834065	3.718511e-56	-8.615850e-47
Msa1087040	Msa1391230	0.915945	3.216677e-85	-8.615850e-47
Msa1087050	Msa1391230	0.858196	9.726142e-63	-8.615850e-47
Msa1087110	Msa1391230	0.870132	1.838430e-66	-8.615850e-47
Msa1087120	Msa1391230	0.822696	2.063336e-53	-8.615850e-47
Msa0263770	Msa1391230	0.829326	5.480063e-55	-8.615850e-47
Msa0268250	Msa1391230	0.853991	1.656959e-61	-8.615850e-47
Msa0268260	Msa1391230	0.903090	4.966023e-79	-8.615850e-47
Msa0268270	Msa1391230	0.842532	2.441794e-58	-8.615850e-47
Msa0268300	Msa1391230	0.861616	9.054596e-64	-8.615850e-47
Msa0268310	Msa1391230	0.851049	1.142728e-60	-8.615850e-47
Msa0268390	Msa1391230	0.822814	1.936272e-53	-8.615850e-47
Msa0268410	Msa1391230	0.806491	8.015460e-50	-8.615850e-47
Msa0268550	Msa1391230	0.817665	2.931140e-52	-8.615850e-47
Msa0268560	Msa1391230	0.823517	1.327284e-53	-8.615850e-47
Msa0268580	Msa1391230	0.823850	1.109087e-53	-8.615850e-47
Msa0268630	Msa1391230	0.807059	6.080375e-50	-8.615850e-47
Msa0268640	Msa1391230	0.811944	5.433428e-51	-8.615850e-47
Msa0268740	Msa1391230	0.814468	1.517595e-51	-8.615850e-47
Msa0268760	Msa1391230	0.817883	2.617008e-52	-8.615850e-47
Msa0268830	Msa1391230	0.825918	3.607518e-54	-8.615850e-47
Msa0268840	Msa1391230	0.801725	7.863232e-49	-8.615850e-47
Msa0268940	Msa1391230	0.809326	1.999625e-50	-8.615850e-47
Msa0269040	Msa1391230	0.830871	2.300268e-55	-8.615850e-47
Msa0269050	Msa1391230	0.814174	1.762535e-51	-8.615850e-47
Msa0269130	Msa1391230	0.845697	3.453983e-59	-8.615850e-47
Msa0269140	Msa1391230	0.907739	3.657934e-81	-8.615850e-47
Msa0269150	Msa1391230	0.855845	4.800308e-62	-8.615850e-47
Msa0344180	Msa1391230	0.817923	2.563568e-52	-8.615850e-47
Msa0344300	Msa1391230	0.800377	1.483369e-48	-8.615850e-47
Msa0344310	Msa1391230	0.836039	1.181666e-56	-8.615850e-47
Msa1143120	Msa1391230	0.829460	5.084610e-55	-8.615850e-47
Msa1143130	Msa1391230	0.804681	1.922082e-49	-8.615850e-47
Msa1143160	Msa1391230	0.800504	1.397183e-48	-8.615850e-47
Msa1143180	Msa1391230	0.837352	5.467864e-57	-8.615850e-47
Msa0582510	Msa1391230	0.828712	7.719901e-55	-8.615850e-47
Msa0582630	Msa1391230	0.808555	2.923370e-50	-8.615850e-47
Msa0582640	Msa1391230	0.836044	1.178123e-56	-8.615850e-47
Msa0582660	Msa1391230	0.823721	1.189362e-53	-8.615850e-47
Msa0582690	Msa1391230	0.817502	3.190641e-52	-8.615850e-47
Msa0582700	Msa1391230	0.805122	1.554349e-49	-8.615850e-47
Msa0582750	Msa1391230	0.813874	2.052371e-51	-8.615850e-47
Msa0582760	Msa1391230	0.828541	8.491784e-55	-8.615850e-47
Msa0582780	Msa1391230	0.826781	2.246787e-54	-8.615850e-47
Msa0582810	Msa1391230	0.816505	5.341787e-52	-8.615850e-47
Msa0582910	Msa1391230	0.819490	1.130150e-52	-8.615850e-47
Msa0582930	Msa1391230	0.832301	1.022036e-55	-8.615850e-47
Msa0591290	Msa1391230	0.835566	1.557873e-56	-8.615850e-47
Msa0591310	Msa1391230	0.825542	4.429479e-54	-8.615850e-47
Msa0591350	Msa1391230	0.853344	2.543019e-61	-8.615850e-47
Msa0591360	Msa1391230	0.817577	3.067945e-52	-8.615850e-47
Msa0591370	Msa1391230	0.808852	2.526232e-50	-8.615850e-47
Msa0591380	Msa1391230	0.814313	1.641524e-51	-8.615850e-47
Msa0867680	Msa1391230	0.868451	6.466267e-66	-8.615850e-47
Msa0867690	Msa1391230	0.833150	6.292916e-56	-8.615850e-47
Msa0908220	Msa1391230	0.862031	6.755524e-64	-8.615850e-47
Msa0908230	Msa1391230	0.890466	9.601994e-74	-8.615850e-47
Msa0908240	Msa1391230	0.830648	2.608795e-55	-8.615850e-47
Msa0908310	Msa1391230	0.883228	5.356449e-71	-8.615850e-47
Msa0908320	Msa1391230	0.831233	1.875179e-55	-8.615850e-47
Msa0908370	Msa1391230	0.874442	6.733254e-68	-8.615850e-47
Msa0908380	Msa1391230	0.806784	6.953888e-50	-8.615850e-47
Msa0908430	Msa1391230	0.821406	4.106691e-53	-8.615850e-47
Msa0908440	Msa1391230	0.915491	5.524300e-85	-8.615850e-47
Msa0908450	Msa1391230	0.848458	6.052501e-60	-8.615850e-47
Msa0908530	Msa1391230	0.884847	1.351834e-71	-8.615850e-47
Msa0908540	Msa1391230	0.843842	1.092607e-58	-8.615850e-47
Msa0908590	Msa1391230	0.822645	2.120439e-53	-8.615850e-47
Msa0908600	Msa1391230	0.897771	1.017925e-76	-8.615850e-47
Msa0908650	Msa1391230	0.845951	2.947579e-59	-8.615850e-47
Msa0908660	Msa1391230	0.898810	3.684368e-77	-8.615850e-47
Msa0908670	Msa1391230	0.841624	4.244398e-58	-8.615850e-47
Msa0908720	Msa1391230	0.866336	3.071942e-65	-8.615850e-47
Msa0908730	Msa1391230	0.837987	3.757421e-57	-8.615850e-47
Msa0911200	Msa1391230	0.842243	2.913120e-58	-8.615850e-47
Msa0924830	Msa1391230	0.814054	1.872988e-51	-8.615850e-47
Msa0924870	Msa1391230	0.810012	1.424467e-50	-8.615850e-47
Msa0924890	Msa1391230	0.803563	3.284051e-49	-8.615850e-47
Msa0924930	Msa1391230	0.892223	1.934231e-74	-8.615850e-47
Msa0924940	Msa1391230	0.862961	3.496281e-64	-8.615850e-47
Msa0925100	Msa1391230	0.839284	1.736973e-57	-8.615850e-47
Msa0925110	Msa1391230	0.852513	4.395970e-61	-8.615850e-47
Msa0931070	Msa1391230	0.827648	1.393118e-54	-8.615850e-47
Msa0931080	Msa1391230	0.809912	1.496875e-50	-8.615850e-47
Msa0931130	Msa1391230	0.820978	5.154466e-53	-8.615850e-47
Msa0931140	Msa1391230	0.801482	8.818007e-49	-8.615850e-47
Msa0931220	Msa1391230	0.825150	5.483536e-54	-8.615850e-47
Msa0931240	Msa1391230	0.810438	1.152411e-50	-8.615850e-47
Msa0931260	Msa1391230	0.835001	2.162805e-56	-8.615850e-47
Msa0931270	Msa1391230	0.815287	9.986276e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1391230	MtrunA17_CPg0492421	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa1391230	MtrunA17_Chr4g0016101	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa1391230	MtrunA17_Chr3g0090841	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa1391230	MtrunA17_Chr4g0002541	83.333	60	10	0	1	60	1	60	3.60e-30	103
Msa1391230	MtrunA17_Chr4g0057401	87.500	40	5	0	92	131	1	40	1.06e-17	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1391230	ATCG00900.1	95.420	131	6	0	1	131	25	155	7.02e-91	260
Msa1391230	ATCG01240.1	95.420	131	6	0	1	131	25	155	7.02e-91	260
Msa1391230	ATMG01270.1	33.824	136	80	3	2	131	15	146	3.86e-18	75.5
Msa1391230	AT2G07696.1	33.824	136	80	3	2	131	15	146	3.86e-18	75.5

Find 25 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCCATTCGTTGGTTATT+AGG	0.268444	tig0021410:-106359	Msa1391230:CDS
CATCAAGTTCCCGTTGAAAT+AGG	0.307921	tig0021410:-106401	Msa1391230:CDS
AAAACGTCCAGGTCGAAATA+TGG	0.317789	tig0021410:-106327	Msa1391230:CDS
CAAATTAAGTTCCGAATTAG+TGG	0.342047	tig0021410:-106300	Msa1391230:CDS
TGGCGATGCCATACGCAAAA+AGG	0.366109	tig0021410:-106261	Msa1391230:CDS
TTTGGCAGCATCCACTAATT+CGG	0.404543	tig0021410:+106289	None:intergenic
ACGTATTGCTTGACGTAAAA+CGG	0.405511	tig0021410:+106475	None:intergenic
GCTTGACGTAAAACGGATAG+TGG	0.418362	tig0021410:+106482	None:intergenic
GTAAAAGCAAGACGCGTAAA+CGG	0.427761	tig0021410:-106431	Msa1391230:CDS
TATGGCATCGCCATTCCCTT+TGG	0.436234	tig0021410:+106271	None:intergenic
TGTGTGGATCCTATTTCAAC+GGG	0.470768	tig0021410:+106392	None:intergenic
TTATCTATCGAGCTATGAAA+AGG	0.512086	tig0021410:-106529	Msa1391230:CDS
GAAAAGCACTTGCCATTCGT+TGG	0.526859	tig0021410:-106367	Msa1391230:CDS
GTGGATGCTGCCAAAGGGAA+TGG	0.532446	tig0021410:-106281	Msa1391230:CDS
GGCGCATCCCGAAAACGTCC+AGG	0.540732	tig0021410:-106338	Msa1391230:CDS
AAAGGAAGAGACTCATAGAA+TGG	0.548096	tig0021410:-106243	Msa1391230:CDS
TTGTGTGGATCCTATTTCAA+CGG	0.548545	tig0021410:+106391	None:intergenic
AATTAGTGGATGCTGCCAAA+GGG	0.575951	tig0021410:-106286	Msa1391230:CDS
GAATTAGTGGATGCTGCCAA+AGG	0.584526	tig0021410:-106287	Msa1391230:CDS
AGAGACTCATAGAATGGCAG+AGG	0.593635	tig0021410:-106237	Msa1391230:CDS
TTGAAAGCCATATTTCGACC+TGG	0.605724	tig0021410:+106320	None:intergenic
TGCGCCTAATAACCAACGAA+TGG	0.620213	tig0021410:+106355	None:intergenic
GTTAACCGTATTATGAAACA+CGG	0.650772	tig0021410:-106575	Msa1391230:CDS
TTTACGTCAAGCAATACGTG+GGG	0.715577	tig0021410:-106471	Msa1391230:CDS
GTTGAAATAGGATCCACACA+AGG	0.731975	tig0021410:-106389	Msa1391230:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTTTCCGTGTTTCATAATA+CGG	+	tig0021410:106222-106241	None:intergenic	25.0%
	GTTAACCGTATTATGAAACA+CGG	-	tig0021410:106214-106233	Msa1391230:CDS	30.0%
	GAAACACGGAAAAAAATCAT+TGG	-	tig0021410:106228-106247	Msa1391230:CDS	30.0%
	TTATCTATCGAGCTATGAAA+AGG	-	tig0021410:106260-106279	Msa1391230:CDS	30.0%
!!	TCTTGCTTTTACTGCTATAT+CGG	+	tig0021410:106350-106369	None:intergenic	30.0%
	CAAATTAAGTTCCGAATTAG+TGG	-	tig0021410:106489-106508	Msa1391230:CDS	30.0%
	ACGTATTGCTTGACGTAAAA+CGG	+	tig0021410:106317-106336	None:intergenic	35.0%
!	TTTTACGTCAAGCAATACGT+GGG	-	tig0021410:106317-106336	Msa1391230:CDS	35.0%
!!	CTTGCTTTTACTGCTATATC+GGG	+	tig0021410:106349-106368	None:intergenic	35.0%
	TTGTGTGGATCCTATTTCAA+CGG	+	tig0021410:106401-106420	None:intergenic	35.0%
	AAAGGAAGAGACTCATAGAA+TGG	-	tig0021410:106546-106565	Msa1391230:CDS	35.0%
!	GTTTTACGTCAAGCAATACG+TGG	-	tig0021410:106316-106335	Msa1391230:CDS	40.0%
	TTTACGTCAAGCAATACGTG+GGG	-	tig0021410:106318-106337	Msa1391230:CDS	40.0%
	GTAAAAGCAAGACGCGTAAA+CGG	-	tig0021410:106358-106377	Msa1391230:CDS	40.0%
	CATCAAGTTCCCGTTGAAAT+AGG	-	tig0021410:106388-106407	Msa1391230:CDS	40.0%
	TGTGTGGATCCTATTTCAAC+GGG	+	tig0021410:106400-106419	None:intergenic	40.0%
	GTTGAAATAGGATCCACACA+AGG	-	tig0021410:106400-106419	Msa1391230:CDS	40.0%
!	CTTGCCATTCGTTGGTTATT+AGG	-	tig0021410:106430-106449	Msa1391230:CDS	40.0%
!	TATTTCGACCTGGACGTTTT+CGG	+	tig0021410:106462-106481	None:intergenic	40.0%
	AAAACGTCCAGGTCGAAATA+TGG	-	tig0021410:106462-106481	Msa1391230:CDS	40.0%
	TTGAAAGCCATATTTCGACC+TGG	+	tig0021410:106472-106491	None:intergenic	40.0%
	TTTGGCAGCATCCACTAATT+CGG	+	tig0021410:106503-106522	None:intergenic	40.0%
!	AATTAGTGGATGCTGCCAAA+GGG	-	tig0021410:106503-106522	Msa1391230:CDS	40.0%
!	AGTCTCTTCCTTTTTGCGTA+TGG	+	tig0021410:106539-106558	None:intergenic	40.0%
	GCTTGACGTAAAACGGATAG+TGG	+	tig0021410:106310-106329	None:intergenic	45.0%
!!	GAAAAGCACTTGCCATTCGT+TGG	-	tig0021410:106422-106441	Msa1391230:CDS	45.0%
	TGCGCCTAATAACCAACGAA+TGG	+	tig0021410:106437-106456	None:intergenic	45.0%
!	ATTTCGACCTGGACGTTTTC+GGG	+	tig0021410:106461-106480	None:intergenic	45.0%
!	GAATTAGTGGATGCTGCCAA+AGG	-	tig0021410:106502-106521	Msa1391230:CDS	45.0%
	AGAGACTCATAGAATGGCAG+AGG	-	tig0021410:106552-106571	Msa1391230:CDS	45.0%
!	GGCAAGTGCTTTTCCTTGTG+TGG	+	tig0021410:106416-106435	None:intergenic	50.0%
	TATGGCATCGCCATTCCCTT+TGG	+	tig0021410:106521-106540	None:intergenic	50.0%
	TGGCGATGCCATACGCAAAA+AGG	-	tig0021410:106528-106547	Msa1391230:CDS	50.0%
	GTGGATGCTGCCAAAGGGAA+TGG	-	tig0021410:106508-106527	Msa1391230:CDS	55.0%
	GGCGCATCCCGAAAACGTCC+AGG	-	tig0021410:106451-106470	Msa1391230:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0021410	gene	106208	106603	106208	ID=Msa1391230;Name=Msa1391230
tig0021410	mRNA	106208	106603	106208	ID=Msa1391230-mRNA-1;Parent=Msa1391230;Name=Msa1391230-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|131
tig0021410	exon	106208	106603	106208	ID=Msa1391230-mRNA-1:exon:12541;Parent=Msa1391230-mRNA-1
tig0021410	CDS	106208	106603	106208	ID=Msa1391230-mRNA-1:cds;Parent=Msa1391230-mRNA-1

Gene Sequence

>Msa1391230

ATGTTGGTTAACCGTATTATGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCTATGAAAAGGATTCAACAAAAGACAGAAACAAATCCACTATCCGTTTTACGTCAAGCAATACGTGGGGTAACTCCCGATATAGCAGTAAAAGCAAGACGCGTAAACGGATCGACTCATCAAGTTCCCGTTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGCGCATCCCGAAAACGTCCAGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAATGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

>Msa1391230

MLVNRIMKHGKKSLAYQIIYRAMKRIQQKTETNPLSVLRQAIRGVTPDIAVKARRVNGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGNGDAIRKKEETHRMAEANRAFAHFR*