Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1385410 | AES69829.1 | 66.758 | 364 | 42 | 6 | 52 | 336 | 26 | 389 | 1.08e-134 | 414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1385410 | sp|Q9GE26|RR7_AMBTC | 93.182 | 132 | 5 | 1 | 144 | 271 | 23 | 154 | 1.07e-81 | 248 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1385410 | G7J101 | 66.758 | 364 | 42 | 6 | 52 | 336 | 26 | 389 | 5.15e-135 | 414 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0095190 | Msa1385410 | 0.802823 | 4.672419e-49 | -8.615850e-47 |
Msa1354320 | Msa1385410 | 0.800547 | 1.369174e-48 | -8.615850e-47 |
Msa1354420 | Msa1385410 | 0.919566 | 3.834179e-87 | -8.615850e-47 |
Msa1354430 | Msa1385410 | 0.857588 | 1.473829e-62 | -8.615850e-47 |
Msa1354480 | Msa1385410 | 0.852677 | 3.946801e-61 | -8.615850e-47 |
Msa1354490 | Msa1385410 | 0.882698 | 8.373558e-71 | -8.615850e-47 |
Msa1354500 | Msa1385410 | 0.878446 | 2.790973e-69 | -8.615850e-47 |
Msa1354550 | Msa1385410 | 0.924507 | 6.428143e-90 | -8.615850e-47 |
Msa1354560 | Msa1385410 | 0.838768 | 2.363950e-57 | -8.615850e-47 |
Msa1354610 | Msa1385410 | 0.853166 | 2.860293e-61 | -8.615850e-47 |
Msa1354620 | Msa1385410 | 0.897010 | 2.127888e-76 | -8.615850e-47 |
Msa1354630 | Msa1385410 | 0.877240 | 7.366953e-69 | -8.615850e-47 |
Msa1354680 | Msa1385410 | 0.879385 | 1.301683e-69 | -8.615850e-47 |
Msa1354690 | Msa1385410 | 0.869354 | 3.296215e-66 | -8.615850e-47 |
Msa1354700 | Msa1385410 | 0.820219 | 7.699065e-53 | -8.615850e-47 |
Msa1354740 | Msa1385410 | 0.846873 | 1.652408e-59 | -8.615850e-47 |
Msa1354750 | Msa1385410 | 0.892889 | 1.046270e-74 | -8.615850e-47 |
Msa1354760 | Msa1385410 | 0.866740 | 2.286559e-65 | -8.615850e-47 |
Msa1354810 | Msa1385410 | 0.933332 | 2.204025e-95 | -8.615850e-47 |
Msa1354820 | Msa1385410 | 0.859146 | 5.061535e-63 | -8.615850e-47 |
Msa1354900 | Msa1385410 | 0.824879 | 6.354985e-54 | -8.615850e-47 |
Msa1354910 | Msa1385410 | 0.850684 | 1.447883e-60 | -8.615850e-47 |
Msa1354920 | Msa1385410 | 0.817319 | 3.507378e-52 | -8.615850e-47 |
Msa1354930 | Msa1385410 | 0.835370 | 1.745646e-56 | -8.615850e-47 |
Msa1354980 | Msa1385410 | 0.908714 | 1.263995e-81 | -8.615850e-47 |
Msa1354990 | Msa1385410 | 0.838249 | 3.216523e-57 | -8.615850e-47 |
Msa1355070 | Msa1385410 | 0.819564 | 1.086834e-52 | -8.615850e-47 |
Msa1355080 | Msa1385410 | 0.837058 | 6.500699e-57 | -8.615850e-47 |
Msa1355090 | Msa1385410 | 0.816752 | 4.702820e-52 | -8.615850e-47 |
Msa1355100 | Msa1385410 | 0.835485 | 1.632630e-56 | -8.615850e-47 |
Msa1365890 | Msa1385410 | 0.927174 | 1.696618e-91 | -8.615850e-47 |
Msa1365900 | Msa1385410 | 0.823355 | 1.448033e-53 | -8.615850e-47 |
Msa1365950 | Msa1385410 | 0.839973 | 1.150185e-57 | -8.615850e-47 |
Msa1365960 | Msa1385410 | 0.854639 | 1.076664e-61 | -8.615850e-47 |
Msa1365970 | Msa1385410 | 0.867936 | 9.470997e-66 | -8.615850e-47 |
Msa1366080 | Msa1385410 | 0.921757 | 2.373705e-88 | -8.615850e-47 |
Msa1366090 | Msa1385410 | 0.829342 | 5.430187e-55 | -8.615850e-47 |
Msa1368230 | Msa1385410 | 0.881828 | 1.735293e-70 | -8.615850e-47 |
Msa1368240 | Msa1385410 | 0.854981 | 8.568481e-62 | -8.615850e-47 |
Msa1380590 | Msa1385410 | 0.807874 | 4.084571e-50 | -8.615850e-47 |
Msa1380600 | Msa1385410 | 0.833520 | 5.086462e-56 | -8.615850e-47 |
Msa1380610 | Msa1385410 | 0.817718 | 2.851286e-52 | -8.615850e-47 |
Msa1380620 | Msa1385410 | 0.847576 | 1.059513e-59 | -8.615850e-47 |
Msa1380680 | Msa1385410 | 0.824826 | 6.538019e-54 | -8.615850e-47 |
Msa1380690 | Msa1385410 | 0.813571 | 2.393251e-51 | -8.615850e-47 |
Msa1385410 | Msa1385420 | 0.832759 | 7.868343e-56 | -8.615850e-47 |
Msa1385410 | Msa1391090 | 0.855122 | 7.797626e-62 | -8.615850e-47 |
Msa1385410 | Msa1391100 | 0.864920 | 8.591105e-65 | -8.615850e-47 |
Msa1385410 | Msa1391110 | 0.857693 | 1.371550e-62 | -8.615850e-47 |
Msa1385410 | Msa1391160 | 0.888343 | 6.421890e-73 | -8.615850e-47 |
Msa1385410 | Msa1391170 | 0.844465 | 7.432649e-59 | -8.615850e-47 |
Msa1385410 | Msa1391220 | 0.863139 | 3.081163e-64 | -8.615850e-47 |
Msa1385410 | Msa1391230 | 0.863479 | 2.417140e-64 | -8.615850e-47 |
Msa1385410 | Msa1391240 | 0.874892 | 4.735116e-68 | -8.615850e-47 |
Msa1385410 | Msa1394030 | 0.829904 | 3.964582e-55 | -8.615850e-47 |
Msa1385410 | Msa1394040 | 0.844525 | 7.161457e-59 | -8.615850e-47 |
Msa1385410 | Msa1394150 | 0.857573 | 1.488684e-62 | -8.615850e-47 |
Msa1385410 | Msa1394160 | 0.831146 | 1.969105e-55 | -8.615850e-47 |
Msa1385410 | Msa1394210 | 0.829879 | 4.021227e-55 | -8.615850e-47 |
Msa1385410 | Msa1394220 | 0.827911 | 1.204092e-54 | -8.615850e-47 |
Msa1385410 | Msa1394230 | 0.830025 | 3.704254e-55 | -8.615850e-47 |
Msa1385410 | Msa1394250 | 0.801714 | 7.902246e-49 | -8.615850e-47 |
Msa1385410 | Msa1460120 | 0.839288 | 1.732885e-57 | -8.615850e-47 |
Msa1385410 | Msa1460130 | 0.852627 | 4.076865e-61 | -8.615850e-47 |
Msa0139800 | Msa1385410 | 0.844337 | 8.047785e-59 | -8.615850e-47 |
Msa0139810 | Msa1385410 | 0.804335 | 2.269670e-49 | -8.615850e-47 |
Msa0202640 | Msa1385410 | 0.819275 | 1.265265e-52 | -8.615850e-47 |
Msa1305090 | Msa1385410 | 0.865798 | 4.546749e-65 | -8.615850e-47 |
Msa0370210 | Msa1385410 | 0.818247 | 2.165508e-52 | -8.615850e-47 |
Msa0398630 | Msa1385410 | 0.831777 | 1.377537e-55 | -8.615850e-47 |
Msa0405420 | Msa1385410 | 0.845248 | 4.571676e-59 | -8.615850e-47 |
Msa0405430 | Msa1385410 | 0.840382 | 8.995910e-58 | -8.615850e-47 |
Msa0405440 | Msa1385410 | 0.856948 | 2.278012e-62 | -8.615850e-47 |
Msa0405510 | Msa1385410 | 0.845054 | 5.157383e-59 | -8.615850e-47 |
Msa0405520 | Msa1385410 | 0.813564 | 2.401545e-51 | -8.615850e-47 |
Msa0405530 | Msa1385410 | 0.842502 | 2.486115e-58 | -8.615850e-47 |
Msa0983630 | Msa1385410 | 0.904634 | 9.993567e-80 | -8.615850e-47 |
Msa0983640 | Msa1385410 | 0.834205 | 3.428798e-56 | -8.615850e-47 |
Msa0983720 | Msa1385410 | 0.823999 | 1.023448e-53 | -8.615850e-47 |
Msa1022050 | Msa1385410 | 0.911465 | 5.901135e-83 | -8.615850e-47 |
Msa1022060 | Msa1385410 | 0.826410 | 2.754462e-54 | -8.615850e-47 |
Msa1064410 | Msa1385410 | 0.837863 | 4.042627e-57 | -8.615850e-47 |
Msa1086070 | Msa1385410 | 0.832759 | 7.868619e-56 | -8.615850e-47 |
Msa1086080 | Msa1385410 | 0.844152 | 9.023102e-59 | -8.615850e-47 |
Msa1086090 | Msa1385410 | 0.808508 | 2.992993e-50 | -8.615850e-47 |
Msa1086100 | Msa1385410 | 0.823849 | 1.109809e-53 | -8.615850e-47 |
Msa1086140 | Msa1385410 | 0.846038 | 2.791256e-59 | -8.615850e-47 |
Msa1086150 | Msa1385410 | 0.835512 | 1.606842e-56 | -8.615850e-47 |
Msa1086180 | Msa1385410 | 0.805473 | 1.312599e-49 | -8.615850e-47 |
Msa1086190 | Msa1385410 | 0.853444 | 2.379629e-61 | -8.615850e-47 |
Msa1086200 | Msa1385410 | 0.826117 | 3.234992e-54 | -8.615850e-47 |
Msa1086210 | Msa1385410 | 0.824116 | 9.608229e-54 | -8.615850e-47 |
Msa1086250 | Msa1385410 | 0.821395 | 4.130707e-53 | -8.615850e-47 |
Msa1086270 | Msa1385410 | 0.841142 | 5.683399e-58 | -8.615850e-47 |
Msa1086280 | Msa1385410 | 0.824350 | 8.464917e-54 | -8.615850e-47 |
Msa1086360 | Msa1385410 | 0.805885 | 1.075328e-49 | -8.615850e-47 |
Msa1086380 | Msa1385410 | 0.832528 | 8.978175e-56 | -8.615850e-47 |
Msa1086430 | Msa1385410 | 0.800318 | 1.524645e-48 | -8.615850e-47 |
Msa1086450 | Msa1385410 | 0.825577 | 4.346112e-54 | -8.615850e-47 |
Msa1086470 | Msa1385410 | 0.834694 | 2.584899e-56 | -8.615850e-47 |
Msa1086550 | Msa1385410 | 0.850265 | 1.898702e-60 | -8.615850e-47 |
Msa1086560 | Msa1385410 | 0.806520 | 7.904452e-50 | -8.615850e-47 |
Msa1086590 | Msa1385410 | 0.870542 | 1.348738e-66 | -8.615850e-47 |
Msa1086600 | Msa1385410 | 0.869359 | 3.285937e-66 | -8.615850e-47 |
Msa1086720 | Msa1385410 | 0.876825 | 1.026229e-68 | -8.615850e-47 |
Msa1086730 | Msa1385410 | 0.875022 | 4.274796e-68 | -8.615850e-47 |
Msa1086740 | Msa1385410 | 0.875523 | 2.882561e-68 | -8.615850e-47 |
Msa1086790 | Msa1385410 | 0.926980 | 2.218756e-91 | -8.615850e-47 |
Msa1086800 | Msa1385410 | 0.847518 | 1.099561e-59 | -8.615850e-47 |
Msa1086860 | Msa1385410 | 0.809979 | 1.447314e-50 | -8.615850e-47 |
Msa1086880 | Msa1385410 | 0.833256 | 5.920677e-56 | -8.615850e-47 |
Msa1086890 | Msa1385410 | 0.845441 | 4.052707e-59 | -8.615850e-47 |
Msa1086900 | Msa1385410 | 0.821412 | 4.094804e-53 | -8.615850e-47 |
Msa1086910 | Msa1385410 | 0.825784 | 3.879867e-54 | -8.615850e-47 |
Msa1086960 | Msa1385410 | 0.893538 | 5.728588e-75 | -8.615850e-47 |
Msa1086970 | Msa1385410 | 0.848483 | 5.957063e-60 | -8.615850e-47 |
Msa1087030 | Msa1385410 | 0.834586 | 2.751051e-56 | -8.615850e-47 |
Msa1087040 | Msa1385410 | 0.873756 | 1.148722e-67 | -8.615850e-47 |
Msa1087050 | Msa1385410 | 0.872861 | 2.295793e-67 | -8.615850e-47 |
Msa1087110 | Msa1385410 | 0.900654 | 5.899724e-78 | -8.615850e-47 |
Msa1087120 | Msa1385410 | 0.847570 | 1.063391e-59 | -8.615850e-47 |
Msa1091700 | Msa1385410 | 0.809951 | 1.467546e-50 | -8.615850e-47 |
Msa0263770 | Msa1385410 | 0.850485 | 1.646888e-60 | -8.615850e-47 |
Msa0268170 | Msa1385410 | 0.834257 | 3.327062e-56 | -8.615850e-47 |
Msa0268250 | Msa1385410 | 0.832808 | 7.650625e-56 | -8.615850e-47 |
Msa0268260 | Msa1385410 | 0.889602 | 2.090692e-73 | -8.615850e-47 |
Msa0268270 | Msa1385410 | 0.894156 | 3.214504e-75 | -8.615850e-47 |
Msa0268300 | Msa1385410 | 0.898354 | 5.758996e-77 | -8.615850e-47 |
Msa0268310 | Msa1385410 | 0.839002 | 2.055590e-57 | -8.615850e-47 |
Msa0268390 | Msa1385410 | 0.840681 | 7.508551e-58 | -8.615850e-47 |
Msa0268400 | Msa1385410 | 0.819154 | 1.347841e-52 | -8.615850e-47 |
Msa0268410 | Msa1385410 | 0.833569 | 4.944940e-56 | -8.615850e-47 |
Msa0268550 | Msa1385410 | 0.829944 | 3.876286e-55 | -8.615850e-47 |
Msa0268560 | Msa1385410 | 0.842411 | 2.628231e-58 | -8.615850e-47 |
Msa0268570 | Msa1385410 | 0.805075 | 1.590463e-49 | -8.615850e-47 |
Msa0268580 | Msa1385410 | 0.859059 | 5.372647e-63 | -8.615850e-47 |
Msa0268610 | Msa1385410 | 0.806004 | 1.015330e-49 | -8.615850e-47 |
Msa0268630 | Msa1385410 | 0.842386 | 2.668843e-58 | -8.615850e-47 |
Msa0268640 | Msa1385410 | 0.817412 | 3.342420e-52 | -8.615850e-47 |
Msa0268740 | Msa1385410 | 0.852942 | 3.314347e-61 | -8.615850e-47 |
Msa0268750 | Msa1385410 | 0.819781 | 9.696206e-53 | -8.615850e-47 |
Msa0268760 | Msa1385410 | 0.810386 | 1.182981e-50 | -8.615850e-47 |
Msa0268830 | Msa1385410 | 0.846581 | 1.985683e-59 | -8.615850e-47 |
Msa0268840 | Msa1385410 | 0.830608 | 2.668737e-55 | -8.615850e-47 |
Msa0268940 | Msa1385410 | 0.827180 | 1.803530e-54 | -8.615850e-47 |
Msa0268950 | Msa1385410 | 0.852468 | 4.526057e-61 | -8.615850e-47 |
Msa0268960 | Msa1385410 | 0.835843 | 1.324920e-56 | -8.615850e-47 |
Msa0269040 | Msa1385410 | 0.850208 | 1.970194e-60 | -8.615850e-47 |
Msa0269050 | Msa1385410 | 0.849333 | 3.459758e-60 | -8.615850e-47 |
Msa0269130 | Msa1385410 | 0.824274 | 8.822371e-54 | -8.615850e-47 |
Msa0269140 | Msa1385410 | 0.903801 | 2.381133e-79 | -8.615850e-47 |
Msa0269150 | Msa1385410 | 0.872829 | 2.353348e-67 | -8.615850e-47 |
Msa0344180 | Msa1385410 | 0.812940 | 3.292136e-51 | -8.615850e-47 |
Msa0344190 | Msa1385410 | 0.835945 | 1.248733e-56 | -8.615850e-47 |
Msa0344300 | Msa1385410 | 0.826814 | 2.207066e-54 | -8.615850e-47 |
Msa0344310 | Msa1385410 | 0.850481 | 1.651436e-60 | -8.615850e-47 |
Msa1143120 | Msa1385410 | 0.860020 | 2.763725e-63 | -8.615850e-47 |
Msa1143130 | Msa1385410 | 0.800448 | 1.434171e-48 | -8.615850e-47 |
Msa1143160 | Msa1385410 | 0.834362 | 3.131339e-56 | -8.615850e-47 |
Msa1143170 | Msa1385410 | 0.809115 | 2.219072e-50 | -8.615850e-47 |
Msa1143180 | Msa1385410 | 0.821371 | 4.183886e-53 | -8.615850e-47 |
Msa0582510 | Msa1385410 | 0.851870 | 6.695616e-61 | -8.615850e-47 |
Msa0582520 | Msa1385410 | 0.816573 | 5.158974e-52 | -8.615850e-47 |
Msa0582630 | Msa1385410 | 0.838476 | 2.810880e-57 | -8.615850e-47 |
Msa0582640 | Msa1385410 | 0.848199 | 7.138462e-60 | -8.615850e-47 |
Msa0582650 | Msa1385410 | 0.801272 | 9.736599e-49 | -8.615850e-47 |
Msa0582660 | Msa1385410 | 0.841317 | 5.113103e-58 | -8.615850e-47 |
Msa0582690 | Msa1385410 | 0.859945 | 2.911343e-63 | -8.615850e-47 |
Msa0582700 | Msa1385410 | 0.830735 | 2.483633e-55 | -8.615850e-47 |
Msa0582750 | Msa1385410 | 0.839006 | 2.051105e-57 | -8.615850e-47 |
Msa0582760 | Msa1385410 | 0.844449 | 7.506652e-59 | -8.615850e-47 |
Msa0582770 | Msa1385410 | 0.802884 | 4.538091e-49 | -8.615850e-47 |
Msa0582780 | Msa1385410 | 0.828454 | 8.910544e-55 | -8.615850e-47 |
Msa0582810 | Msa1385410 | 0.855516 | 5.986615e-62 | -8.615850e-47 |
Msa0582820 | Msa1385410 | 0.828388 | 9.241086e-55 | -8.615850e-47 |
Msa0582910 | Msa1385410 | 0.849362 | 3.394570e-60 | -8.615850e-47 |
Msa0582920 | Msa1385410 | 0.810826 | 9.503899e-51 | -8.615850e-47 |
Msa0582930 | Msa1385410 | 0.837556 | 4.849035e-57 | -8.615850e-47 |
Msa0591290 | Msa1385410 | 0.834857 | 2.350966e-56 | -8.615850e-47 |
Msa0591310 | Msa1385410 | 0.833309 | 5.743403e-56 | -8.615850e-47 |
Msa0591350 | Msa1385410 | 0.876916 | 9.541976e-69 | -8.615850e-47 |
Msa0591360 | Msa1385410 | 0.821410 | 4.097210e-53 | -8.615850e-47 |
Msa0591380 | Msa1385410 | 0.812799 | 3.534922e-51 | -8.615850e-47 |
Msa0867680 | Msa1385410 | 0.896205 | 4.610973e-76 | -8.615850e-47 |
Msa0867690 | Msa1385410 | 0.857404 | 1.670252e-62 | -8.615850e-47 |
Msa0876520 | Msa1385410 | 0.830482 | 2.865426e-55 | -8.615850e-47 |
Msa0908220 | Msa1385410 | 0.856216 | 3.737337e-62 | -8.615850e-47 |
Msa0908230 | Msa1385410 | 0.886571 | 3.044916e-72 | -8.615850e-47 |
Msa0908240 | Msa1385410 | 0.865571 | 5.360122e-65 | -8.615850e-47 |
Msa0908310 | Msa1385410 | 0.907665 | 3.962239e-81 | -8.615850e-47 |
Msa0908320 | Msa1385410 | 0.850851 | 1.299972e-60 | -8.615850e-47 |
Msa0908370 | Msa1385410 | 0.905534 | 3.879623e-80 | -8.615850e-47 |
Msa0908380 | Msa1385410 | 0.820240 | 7.613857e-53 | -8.615850e-47 |
Msa0908430 | Msa1385410 | 0.844107 | 9.278118e-59 | -8.615850e-47 |
Msa0908440 | Msa1385410 | 0.903895 | 2.159679e-79 | -8.615850e-47 |
Msa0908450 | Msa1385410 | 0.883680 | 3.656395e-71 | -8.615850e-47 |
Msa0908480 | Msa1385410 | 0.825351 | 4.915529e-54 | -8.615850e-47 |
Msa0908530 | Msa1385410 | 0.916760 | 1.207652e-85 | -8.615850e-47 |
Msa0908540 | Msa1385410 | 0.851866 | 6.712401e-61 | -8.615850e-47 |
Msa0908590 | Msa1385410 | 0.837950 | 3.841750e-57 | -8.615850e-47 |
Msa0908600 | Msa1385410 | 0.874261 | 7.754392e-68 | -8.615850e-47 |
Msa0908610 | Msa1385410 | 0.848448 | 6.089607e-60 | -8.615850e-47 |
Msa0908650 | Msa1385410 | 0.851908 | 6.529522e-61 | -8.615850e-47 |
Msa0908660 | Msa1385410 | 0.888567 | 5.263554e-73 | -8.615850e-47 |
Msa0908670 | Msa1385410 | 0.884971 | 1.215023e-71 | -8.615850e-47 |
Msa0908720 | Msa1385410 | 0.902944 | 5.773102e-79 | -8.615850e-47 |
Msa0908730 | Msa1385410 | 0.849110 | 3.989782e-60 | -8.615850e-47 |
Msa0911190 | Msa1385410 | 0.867204 | 1.625868e-65 | -8.615850e-47 |
Msa0911200 | Msa1385410 | 0.842448 | 2.569929e-58 | -8.615850e-47 |
Msa0911230 | Msa1385410 | 0.831781 | 1.374078e-55 | -8.615850e-47 |
Msa0924830 | Msa1385410 | 0.812463 | 4.187341e-51 | -8.615850e-47 |
Msa0924870 | Msa1385410 | 0.843424 | 1.413329e-58 | -8.615850e-47 |
Msa0924880 | Msa1385410 | 0.801853 | 7.401668e-49 | -8.615850e-47 |
Msa0924930 | Msa1385410 | 0.869936 | 2.130991e-66 | -8.615850e-47 |
Msa0924940 | Msa1385410 | 0.851245 | 1.006429e-60 | -8.615850e-47 |
Msa0925100 | Msa1385410 | 0.870080 | 1.911521e-66 | -8.615850e-47 |
Msa0925110 | Msa1385410 | 0.844082 | 9.423948e-59 | -8.615850e-47 |
Msa0931070 | Msa1385410 | 0.846465 | 2.135992e-59 | -8.615850e-47 |
Msa0931080 | Msa1385410 | 0.825227 | 5.257768e-54 | -8.615850e-47 |
Msa0931130 | Msa1385410 | 0.848034 | 7.925663e-60 | -8.615850e-47 |
Msa0931140 | Msa1385410 | 0.829161 | 6.009139e-55 | -8.615850e-47 |
Msa0931190 | Msa1385410 | 0.802503 | 5.439468e-49 | -8.615850e-47 |
Msa0931210 | Msa1385410 | 0.808393 | 3.165546e-50 | -8.615850e-47 |
Msa0931220 | Msa1385410 | 0.830285 | 3.199952e-55 | -8.615850e-47 |
Msa0931230 | Msa1385410 | 0.805717 | 1.166515e-49 | -8.615850e-47 |
Msa0931240 | Msa1385410 | 0.824013 | 1.015703e-53 | -8.615850e-47 |
Msa0931260 | Msa1385410 | 0.855419 | 6.390020e-62 | -8.615850e-47 |
Msa0931270 | Msa1385410 | 0.833710 | 4.560533e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1385410 | MtrunA17_CPg0492421 | 88.806 | 134 | 9 | 2 | 144 | 271 | 23 | 156 | 1.71e-76 | 231 |
Msa1385410 | MtrunA17_Chr4g0016101 | 88.806 | 134 | 9 | 2 | 144 | 271 | 23 | 156 | 1.71e-76 | 231 |
Msa1385410 | MtrunA17_Chr3g0090841 | 88.806 | 134 | 9 | 2 | 144 | 271 | 23 | 156 | 1.71e-76 | 231 |
Msa1385410 | MtrunA17_CPg0492431 | 96.875 | 64 | 2 | 0 | 273 | 336 | 4 | 67 | 5.37e-35 | 129 |
Msa1385410 | MtrunA17_Chr3g0090851 | 96.875 | 64 | 2 | 0 | 273 | 336 | 4 | 67 | 5.37e-35 | 129 |
Msa1385410 | MtrunA17_Chr4g0016091 | 96.875 | 64 | 2 | 0 | 273 | 336 | 4 | 67 | 5.37e-35 | 129 |
Msa1385410 | MtrunA17_Chr4g0002541 | 83.333 | 60 | 10 | 0 | 146 | 205 | 1 | 60 | 8.38e-28 | 103 |
Msa1385410 | MtrunA17_Chr4g0057401 | 87.179 | 39 | 5 | 0 | 233 | 271 | 1 | 39 | 6.31e-15 | 68.2 |
Msa1385410 | MtrunA17_CPg0492401 | 78.947 | 38 | 8 | 0 | 52 | 89 | 6 | 43 | 4.76e-14 | 65.9 |
Msa1385410 | MtrunA17_Chr7g0234981 | 82.353 | 34 | 6 | 0 | 110 | 143 | 49 | 82 | 7.44e-12 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1385410 | ATCG00900.1 | 92.424 | 132 | 6 | 1 | 144 | 271 | 23 | 154 | 7.33e-82 | 245 |
Msa1385410 | ATCG01240.1 | 92.424 | 132 | 6 | 1 | 144 | 271 | 23 | 154 | 7.33e-82 | 245 |
Msa1385410 | ATCG00905.1 | 91.176 | 34 | 3 | 0 | 110 | 143 | 41 | 74 | 4.09e-14 | 67.4 |
Msa1385410 | ATCG01230.1 | 91.176 | 34 | 3 | 0 | 110 | 143 | 41 | 74 | 4.09e-14 | 67.4 |
Msa1385410 | ATMG01270.1 | 30.657 | 137 | 87 | 3 | 144 | 273 | 12 | 147 | 1.30e-11 | 62.4 |
Msa1385410 | AT2G07696.1 | 30.657 | 137 | 87 | 3 | 144 | 273 | 12 | 147 | 1.30e-11 | 62.4 |
Find 70 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGGACCATATAATATTTA+TGG | 0.217080 | tig0020748:-99353 | None:intergenic |
CATCAAGTTCCCGTTGAAAT+AGG | 0.307921 | tig0020748:+101540 | Msa1385410:CDS |
AGCGGGGATCTTTCACAAAA+AGG | 0.310040 | tig0020748:+100586 | Msa1385410:CDS |
AAAACGTCCAGGTCGAAATA+TGG | 0.317789 | tig0020748:+101614 | Msa1385410:CDS |
CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | tig0020748:+100232 | Msa1385410:CDS |
AGATCCCCGCTTTCGTGCTT+TGG | 0.334118 | tig0020748:-100574 | None:intergenic |
CAAATTAAGTTCCGAATTAG+TGG | 0.342047 | tig0020748:+101641 | Msa1385410:CDS |
GTTGCATATCGTCATCAAAA+TGG | 0.355659 | tig0020748:+99416 | Msa1385410:CDS |
TGGCGATGCCATACGCAAAA+AGG | 0.366109 | tig0020748:+101680 | Msa1385410:CDS |
CCTTTACTCCGACAGCATCT+AGG | 0.372692 | tig0020748:-101166 | None:intergenic |
AAAAGGATTCCTATTCTAAA+GGG | 0.399720 | tig0020748:+100603 | Msa1385410:CDS |
TTTGGCAGCATCCACTAATT+CGG | 0.404543 | tig0020748:-101652 | None:intergenic |
ACGTATTGCTTGACGTAAAA+CGG | 0.405511 | tig0020748:-101466 | None:intergenic |
CATATTTAGAACGACCTTGT+TGG | 0.411865 | tig0020748:-101193 | None:intergenic |
GCTTGACGTAAAACGGATAG+TGG | 0.418362 | tig0020748:-101459 | None:intergenic |
TAGGACCATATAATATTTAT+GGG | 0.424357 | tig0020748:-99352 | None:intergenic |
GTAAAAGCAAGACGCGTAAA+CGG | 0.427761 | tig0020748:+101510 | Msa1385410:CDS |
TATGGCATCGCCATTCCCTT+TGG | 0.436234 | tig0020748:-101670 | None:intergenic |
TCCCCGCTTTCGTGCTTTGG+TGG | 0.445504 | tig0020748:-100571 | None:intergenic |
GGTTATGCACCCTTTAGAAT+AGG | 0.446599 | tig0020748:-100612 | None:intergenic |
CCCCGCTTTCGTGCTTTGGT+GGG | 0.449392 | tig0020748:-100570 | None:intergenic |
ACCCACCAAAGCACGAAAGC+GGG | 0.461764 | tig0020748:+100569 | Msa1385410:CDS |
CGAATGGATAAGAGGCTTGT+GGG | 0.463465 | tig0020748:-99392 | None:intergenic |
GGGTTGACATAAGGTGGTAT+AGG | 0.464845 | tig0020748:-99371 | None:intergenic |
TGTGTGGATCCTATTTCAAC+GGG | 0.470768 | tig0020748:-101549 | None:intergenic |
AGGCTTGTGGGGTTGACATA+AGG | 0.487369 | tig0020748:-99380 | None:intergenic |
TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | tig0020748:-100224 | None:intergenic |
CTTTACTCCGACAGCATCTA+GGG | 0.502834 | tig0020748:-101165 | None:intergenic |
CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | tig0020748:+101166 | Msa1385410:CDS |
TTATCTATCGAGCTATGAAA+AGG | 0.512086 | tig0020748:+101412 | Msa1385410:CDS |
TTCATGCGCTTCATATTCGC+CGG | 0.514693 | tig0020748:+99320 | Msa1385410:CDS |
ATGCAACGCGAATGGATAAG+AGG | 0.519590 | tig0020748:-99400 | None:intergenic |
GACCCACCAAAGCACGAAAG+CGG | 0.528018 | tig0020748:+100568 | Msa1385410:CDS |
GTGGATGCTGCCAAAGGGAA+TGG | 0.532446 | tig0020748:+101660 | Msa1385410:CDS |
TAATCGATTAGTTAACATGT+TGG | 0.538486 | tig0020748:+101344 | Msa1385410:intron |
GGCGCATCCCGAAAACGTCC+AGG | 0.540732 | tig0020748:+101603 | Msa1385410:intron |
AAAGGAAGAGACTCATAGAA+TGG | 0.548096 | tig0020748:+101698 | Msa1385410:CDS |
TTGTGTGGATCCTATTTCAA+CGG | 0.548545 | tig0020748:-101550 | None:intergenic |
ATGACGATATGCAACGCGAA+TGG | 0.551071 | tig0020748:-99408 | None:intergenic |
ATCGAAAAGAAGCAAATGAA+AGG | 0.561694 | tig0020748:-102043 | None:intergenic |
ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | tig0020748:+101093 | Msa1385410:intron |
TCATGGGTTCTTCTCTCCAT+CGG | 0.567612 | tig0020748:-102212 | None:intergenic |
TAACGGCGCTGTTGTTCCGA+TGG | 0.571426 | tig0020748:+102196 | Msa1385410:CDS |
AATTAGTGGATGCTGCCAAA+GGG | 0.575951 | tig0020748:+101655 | Msa1385410:CDS |
TCATGCGCTTCATATTCGCC+GGG | 0.580793 | tig0020748:+99321 | Msa1385410:CDS |
GAATTAGTGGATGCTGCCAA+AGG | 0.584526 | tig0020748:+101654 | Msa1385410:CDS |
GTGAGATATCACATTGTTCG+AGG | 0.586809 | tig0020748:+101140 | Msa1385410:CDS |
ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | tig0020748:+100240 | Msa1385410:CDS |
TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | tig0020748:+101094 | Msa1385410:intron |
AGAGACTCATAGAATGGCAG+AGG | 0.593635 | tig0020748:+101704 | Msa1385410:CDS |
GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | tig0020748:+101179 | Msa1385410:CDS |
GCGAATGGATAAGAGGCTTG+TGG | 0.602706 | tig0020748:-99393 | None:intergenic |
TTGAAAGCCATATTTCGACC+TGG | 0.605724 | tig0020748:-101621 | None:intergenic |
GGACCATATAATATTTATGG+GGG | 0.609209 | tig0020748:-99350 | None:intergenic |
CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | tig0020748:+101158 | Msa1385410:CDS |
GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | tig0020748:-100214 | None:intergenic |
CCCACCAAAGCACGAAAGCG+GGG | 0.626295 | tig0020748:+100570 | Msa1385410:CDS |
AGGACCATATAATATTTATG+GGG | 0.632114 | tig0020748:-99351 | None:intergenic |
CTTGTGGGGTTGACATAAGG+TGG | 0.633450 | tig0020748:-99377 | None:intergenic |
ATTGTACCATCCTAAAAGCA+AGG | 0.638231 | tig0020748:-100191 | None:intergenic |
GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | tig0020748:+101116 | Msa1385410:CDS |
AAGTTTAGTAATGAGCATAA+CGG | 0.644237 | tig0020748:+102179 | Msa1385410:CDS |
GTTAACCGTATTATGAAACA+CGG | 0.650772 | tig0020748:+101366 | Msa1385410:CDS |
TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | tig0020748:+101095 | Msa1385410:intron |
GACCATATAATATTTATGGG+GGG | 0.666516 | tig0020748:-99349 | None:intergenic |
GAATGGATAAGAGGCTTGTG+GGG | 0.674977 | tig0020748:-99391 | None:intergenic |
ACAATGTGATATCTCACACC+AGG | 0.678462 | tig0020748:-101134 | None:intergenic |
TTTACGTCAAGCAATACGTG+GGG | 0.715577 | tig0020748:+101470 | Msa1385410:CDS |
GTTGAAATAGGATCCACACA+AGG | 0.731975 | tig0020748:+101552 | Msa1385410:CDS |
GTACCATCCTAAAAGCAAGG+AGG | 0.768564 | tig0020748:-100188 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTTTATAATTTATAAATAG+TGG | - | tig0020748:99603-99622 | None:intergenic | 10.0% |
!! | AATTATAAACAACTTAAATT+CGG | + | tig0020748:99612-99631 | Msa1385410:intron | 10.0% |
!!! | AAAAAAATTTACATTTTTCA+GGG | - | tig0020748:99978-99997 | None:intergenic | 10.0% |
!!! | AAAAAAAATTTACATTTTTC+AGG | - | tig0020748:99979-99998 | None:intergenic | 10.0% |
!!! | AAATGTAAATTTTTTTTCTT+AGG | + | tig0020748:99982-100001 | Msa1385410:intron | 10.0% |
!! | ATTATAAACAACTTAAATTC+GGG | + | tig0020748:99613-99632 | Msa1385410:intron | 15.0% |
!! | CATAGAATAGAAAATATTAA+TGG | + | tig0020748:100418-100437 | Msa1385410:intron | 15.0% |
!!! | CATTTTTTTATAACTTATAG+GGG | - | tig0020748:101249-101268 | None:intergenic | 15.0% |
!!! | CCATTTTTTTATAACTTATA+GGG | - | tig0020748:101250-101269 | None:intergenic | 15.0% |
!!! | TCCATTTTTTTATAACTTAT+AGG | - | tig0020748:101251-101270 | None:intergenic | 15.0% |
!! | AATAAATAAAGAGGAATATT+TGG | + | tig0020748:101925-101944 | Msa1385410:intron | 15.0% |
!! | TAGGACCATATAATATTTAT+GGG | - | tig0020748:99355-99374 | None:intergenic | 20.0% |
!! | ATAGGACCATATAATATTTA+TGG | - | tig0020748:99356-99375 | None:intergenic | 20.0% |
!!! | ATGAAAATAATGGACAAAAT+TGG | + | tig0020748:99665-99684 | Msa1385410:intron | 20.0% |
!!! | TTTTTTTAAGAATACTGAGT+CGG | - | tig0020748:99815-99834 | None:intergenic | 20.0% |
!! | ACTCAGTATTCTTAAAAAAA+TGG | + | tig0020748:99815-99834 | Msa1385410:intron | 20.0% |
!!! | TTAATATACAACATAGGTTT+TGG | - | tig0020748:100160-100179 | None:intergenic | 20.0% |
!!! | AAAAAAGAAAAGTGTTCAAT+TGG | + | tig0020748:100779-100798 | Msa1385410:intron | 20.0% |
!!! | AATTACTTCTCGTTATTTTT+CGG | + | tig0020748:100824-100843 | Msa1385410:intron | 20.0% |
!! | CCCTATAAGTTATAAAAAAA+TGG | + | tig0020748:101247-101266 | Msa1385410:intron | 20.0% |
!! | AGAATCAATAGAAAAAGAAT+CGG | + | tig0020748:101822-101841 | Msa1385410:intron | 20.0% |
!! | TTGCTTAAGAATAAATAAAG+AGG | + | tig0020748:101916-101935 | Msa1385410:intron | 20.0% |
!!! | AGGAATATTTGGTATTTTTT+TGG | + | tig0020748:101936-101955 | Msa1385410:intron | 20.0% |
! | AGGACCATATAATATTTATG+GGG | - | tig0020748:99354-99373 | None:intergenic | 25.0% |
!!! | AGTTTTTTTTTTTCTCGAAG+GGG | - | tig0020748:99544-99563 | None:intergenic | 25.0% |
!!! | CAGTTTTTTTTTTTCTCGAA+GGG | - | tig0020748:99545-99564 | None:intergenic | 25.0% |
!!! | TCAGTTTTTTTTTTTCTCGA+AGG | - | tig0020748:99546-99565 | None:intergenic | 25.0% |
! | TCTTACGCATATGAAAATAA+TGG | + | tig0020748:99655-99674 | Msa1385410:intron | 25.0% |
!!! | ATAATGGACAAAATTGGATT+TGG | + | tig0020748:99671-99690 | Msa1385410:intron | 25.0% |
! | ATCCATAGTTAATCCTATTT+CGG | - | tig0020748:99720-99739 | None:intergenic | 25.0% |
! | AAAATCGTCTTTAGTTAGAT+GGG | - | tig0020748:99766-99785 | None:intergenic | 25.0% |
!!! | TTTTTTAAGAATACTGAGTC+GGG | - | tig0020748:99814-99833 | None:intergenic | 25.0% |
! | AAATGGATAAATCAGAACTA+AGG | + | tig0020748:99832-99851 | Msa1385410:intron | 25.0% |
!!! | CACATAAGAACTTTTAGAAT+GGG | - | tig0020748:99937-99956 | None:intergenic | 25.0% |
!!! | ACACATAAGAACTTTTAGAA+TGG | - | tig0020748:99938-99957 | None:intergenic | 25.0% |
! | TTACAAATTCTGTGTTAATG+GGG | - | tig0020748:100058-100077 | None:intergenic | 25.0% |
! | GTTACAAATTCTGTGTTAAT+GGG | - | tig0020748:100059-100078 | None:intergenic | 25.0% |
! | AGTTACAAATTCTGTGTTAA+TGG | - | tig0020748:100060-100079 | None:intergenic | 25.0% |
! | AACCTATGTTGTATATTAAG+AGG | + | tig0020748:100161-100180 | Msa1385410:intron | 25.0% |
! | AACCTCTTAATATACAACAT+AGG | - | tig0020748:100166-100185 | None:intergenic | 25.0% |
! | TAGTATTTAGTTAGTGATCT+CGG | - | tig0020748:100303-100322 | None:intergenic | 25.0% |
!! | GATAGATATCTTTTCAACAT+AGG | + | tig0020748:100526-100545 | Msa1385410:intron | 25.0% |
! | AAAAAGGATTCCTATTCTAA+AGG | + | tig0020748:100602-100621 | Msa1385410:CDS | 25.0% |
! | AAAAGGATTCCTATTCTAAA+GGG | + | tig0020748:100603-100622 | Msa1385410:CDS | 25.0% |
!!! | ATCCAATTGGGATTTTATTT+AGG | + | tig0020748:100670-100689 | Msa1385410:intron | 25.0% |
!!! | GATTTTATTTAGGAGGTATT+GGG | + | tig0020748:100680-100699 | Msa1385410:intron | 25.0% |
!! | GAAGATTATTCTTTTTCTTC+TGG | - | tig0020748:100743-100762 | None:intergenic | 25.0% |
!!! | ATTACTTCTCGTTATTTTTC+GGG | + | tig0020748:100825-100844 | Msa1385410:intron | 25.0% |
! | TTCAATTCTTTCGAAGTAAT+TGG | - | tig0020748:100879-100898 | None:intergenic | 25.0% |
! | CAGAATGTTCTTGTAAATTA+TGG | - | tig0020748:101079-101098 | None:intergenic | 25.0% |
!! | GGGGCTAAAATAATTTATTT+TGG | - | tig0020748:101230-101249 | None:intergenic | 25.0% |
! | ACTAATCGATTACGATAAAT+TGG | - | tig0020748:101336-101355 | None:intergenic | 25.0% |
!! | TAATCGATTAGTTAACATGT+TGG | + | tig0020748:101344-101363 | Msa1385410:intron | 25.0% |
!! | TTTTTCCGTGTTTCATAATA+CGG | - | tig0020748:101374-101393 | None:intergenic | 25.0% |
!! | GATTCTTTTCCAATTATGTA+TGG | - | tig0020748:101808-101827 | None:intergenic | 25.0% |
! | GAAGAATTAGACCAAAAATT+AGG | - | tig0020748:102095-102114 | None:intergenic | 25.0% |
! | AAGTTTAGTAATGAGCATAA+CGG | + | tig0020748:102179-102198 | Msa1385410:CDS | 25.0% |
GACCATATAATATTTATGGG+GGG | - | tig0020748:99352-99371 | None:intergenic | 30.0% | |
GGACCATATAATATTTATGG+GGG | - | tig0020748:99353-99372 | None:intergenic | 30.0% | |
TGGAAAAATTCACATTGCAT+TGG | + | tig0020748:99436-99455 | Msa1385410:CDS | 30.0% | |
GGAAAAATTCACATTGCATT+GGG | + | tig0020748:99437-99456 | Msa1385410:CDS | 30.0% | |
TAGTTAATCCTATTTCGGAT+AGG | - | tig0020748:99715-99734 | None:intergenic | 30.0% | |
ATCCGAAATAGGATTAACTA+TGG | + | tig0020748:99715-99734 | Msa1385410:intron | 30.0% | |
AAATCGTCTTTAGTTAGATG+GGG | - | tig0020748:99765-99784 | None:intergenic | 30.0% | |
CAAAATCGTCTTTAGTTAGA+TGG | - | tig0020748:99767-99786 | None:intergenic | 30.0% | |
!!! | AAGAACTTTTAGAATGGGAA+TGG | - | tig0020748:99932-99951 | None:intergenic | 30.0% |
!!! | ATTTACATTTTTCAGGGTCT+CGG | - | tig0020748:99972-99991 | None:intergenic | 30.0% |
TATCACTACAACAAGCATAA+TGG | + | tig0020748:100026-100045 | Msa1385410:intron | 30.0% | |
AGTGAAAAGGATGATTCATT+CGG | + | tig0020748:100103-100122 | Msa1385410:intron | 30.0% | |
! | CAATTGGATCTAAAATTGAC+GGG | - | tig0020748:100659-100678 | None:intergenic | 30.0% |
! | CCAATTGGATCTAAAATTGA+CGG | - | tig0020748:100660-100679 | None:intergenic | 30.0% |
! | CGTCAATTTTAGATCCAATT+GGG | + | tig0020748:100658-100677 | Msa1385410:intron | 30.0% |
CTCCTAAATAAAATCCCAAT+TGG | - | tig0020748:100675-100694 | None:intergenic | 30.0% | |
!! | CAATTGGGATTTTATTTAGG+AGG | + | tig0020748:100673-100692 | Msa1385410:intron | 30.0% |
!! | GGATTTTATTTAGGAGGTAT+TGG | + | tig0020748:100679-100698 | Msa1385410:intron | 30.0% |
TTGTAAATTATGGCCAATAC+CGG | - | tig0020748:101069-101088 | None:intergenic | 30.0% | |
! | ATTCTGTAGTCTTAGTAAGA+GGG | + | tig0020748:101093-101112 | Msa1385410:intron | 30.0% |
! | AACAAGGTCGTTCTAAATAT+GGG | + | tig0020748:101195-101214 | Msa1385410:intron | 30.0% |
! | ATAAATTGGATCGGATTTTG+CGG | - | tig0020748:101322-101341 | None:intergenic | 30.0% |
TCGATTACGATAAATTGGAT+CGG | - | tig0020748:101331-101350 | None:intergenic | 30.0% | |
GTTAACCGTATTATGAAACA+CGG | + | tig0020748:101366-101385 | Msa1385410:CDS | 30.0% | |
GAAACACGGAAAAAAATCAT+TGG | + | tig0020748:101380-101399 | Msa1385410:CDS | 30.0% | |
TTATCTATCGAGCTATGAAA+AGG | + | tig0020748:101412-101431 | Msa1385410:CDS | 30.0% | |
!! | TCTTGCTTTTACTGCTATAT+CGG | - | tig0020748:101502-101521 | None:intergenic | 30.0% |
CAAATTAAGTTCCGAATTAG+TGG | + | tig0020748:101641-101660 | Msa1385410:CDS | 30.0% | |
ACATAGACCTATGTTATGTA+TGG | + | tig0020748:101780-101799 | Msa1385410:intron | 30.0% | |
TATGGATCCATACATAACAT+AGG | - | tig0020748:101790-101809 | None:intergenic | 30.0% | |
TGTATGGATCCATACATAAT+TGG | + | tig0020748:101796-101815 | Msa1385410:intron | 30.0% | |
GAAAGACGAAATAGAAATGA+TGG | + | tig0020748:101870-101889 | Msa1385410:intron | 30.0% | |
ATCGAAAAGAAGCAAATGAA+AGG | - | tig0020748:102046-102065 | None:intergenic | 30.0% | |
! | TTTCATTTGCTTCTTTTCGA+TGG | + | tig0020748:102045-102064 | Msa1385410:CDS | 30.0% |
!!! | CGATGGAAGTTTTATTTTTC+CGG | + | tig0020748:102062-102081 | Msa1385410:CDS | 30.0% |
CCAAAAATTAGGATCAATTC+CGG | - | tig0020748:102084-102103 | None:intergenic | 30.0% | |
! | AGATAGATCTTTTTGATCAG+AGG | - | tig0020748:102136-102155 | None:intergenic | 30.0% |
CTGATCAAAAAGATCTATCT+TGG | + | tig0020748:102136-102155 | Msa1385410:CDS | 30.0% | |
TGCCCCCCATAAATATTATA+TGG | + | tig0020748:99347-99366 | Msa1385410:CDS | 35.0% | |
GTTGCATATCGTCATCAAAA+TGG | + | tig0020748:99416-99435 | Msa1385410:CDS | 35.0% | |
ATTCACATTGCATTGGGTTT+AGG | + | tig0020748:99443-99462 | Msa1385410:intron | 35.0% | |
TTCACATTGCATTGGGTTTA+GGG | + | tig0020748:99444-99463 | Msa1385410:intron | 35.0% | |
CTGACTAATCCTAAGTCAAA+AGG | + | tig0020748:99562-99581 | Msa1385410:intron | 35.0% | |
AAGAGTAGAGTGTGAAAAGA+AGG | - | tig0020748:99639-99658 | None:intergenic | 35.0% | |
!!! | TTTACATTTTTCAGGGTCTC+GGG | - | tig0020748:99971-99990 | None:intergenic | 35.0% |
TTGCCTAGTATTCAGTGAAA+AGG | + | tig0020748:100090-100109 | Msa1385410:intron | 35.0% | |
! | CATCCTTTTCACTGAATACT+AGG | - | tig0020748:100096-100115 | None:intergenic | 35.0% |
ATTGTACCATCCTAAAAGCA+AGG | - | tig0020748:100194-100213 | None:intergenic | 35.0% | |
! | TCTTTTCTGTATACTCTCTC+TGG | + | tig0020748:100457-100476 | Msa1385410:intron | 35.0% |
TGTAAAGCGTGTGATAGTAA+CGG | - | tig0020748:100485-100504 | None:intergenic | 35.0% | |
! | CCGTCAATTTTAGATCCAAT+TGG | + | tig0020748:100657-100676 | Msa1385410:intron | 35.0% |
TACTTCGAAAGAATTGAACG+AGG | + | tig0020748:100881-100900 | Msa1385410:intron | 35.0% | |
! | CATGAGATTTTCACCTCATA+CGG | - | tig0020748:100909-100928 | None:intergenic | 35.0% |
TGAGGTGAAAATCTCATGTA+CGG | + | tig0020748:100911-100930 | Msa1385410:intron | 35.0% | |
!!! | TGGTTTTTTAGGGGTAATAG+TGG | - | tig0020748:100979-100998 | None:intergenic | 35.0% |
!!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | tig0020748:100989-101008 | None:intergenic | 35.0% |
!!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | tig0020748:100990-101009 | None:intergenic | 35.0% |
GAAATCACTGCTTATATACC+CGG | + | tig0020748:101047-101066 | Msa1385410:intron | 35.0% | |
TGTAAATTATGGCCAATACC+GGG | - | tig0020748:101068-101087 | None:intergenic | 35.0% | |
! | CATTCTGTAGTCTTAGTAAG+AGG | + | tig0020748:101092-101111 | Msa1385410:intron | 35.0% |
! | TTCTGTAGTCTTAGTAAGAG+GGG | + | tig0020748:101094-101113 | Msa1385410:intron | 35.0% |
! | CATATTTAGAACGACCTTGT+TGG | - | tig0020748:101196-101215 | None:intergenic | 35.0% |
! | CAACAAGGTCGTTCTAAATA+TGG | + | tig0020748:101194-101213 | Msa1385410:intron | 35.0% |
! | ACAAGGTCGTTCTAAATATG+GGG | + | tig0020748:101196-101215 | Msa1385410:intron | 35.0% |
ACGTATTGCTTGACGTAAAA+CGG | - | tig0020748:101469-101488 | None:intergenic | 35.0% | |
! | TTTTACGTCAAGCAATACGT+GGG | + | tig0020748:101469-101488 | Msa1385410:CDS | 35.0% |
!! | CTTGCTTTTACTGCTATATC+GGG | - | tig0020748:101501-101520 | None:intergenic | 35.0% |
TTGTGTGGATCCTATTTCAA+CGG | - | tig0020748:101553-101572 | None:intergenic | 35.0% | |
AAAGGAAGAGACTCATAGAA+TGG | + | tig0020748:101698-101717 | Msa1385410:CDS | 35.0% | |
! | ATTTTCGTTAATCCATGAGC+AGG | + | tig0020748:101745-101764 | Msa1385410:intron | 35.0% |
! | CCGGAATTGATCCTAATTTT+TGG | + | tig0020748:102081-102100 | Msa1385410:CDS | 35.0% |
!!! | TTTTTTTCTCGAAGGGGCAA+CGG | - | tig0020748:99538-99557 | None:intergenic | 40.0% |
!!! | GTTTCTCGACCTTTTGACTT+AGG | - | tig0020748:99574-99593 | None:intergenic | 40.0% |
AGAACTAAGGCAAGATGAGA+TGG | + | tig0020748:99845-99864 | Msa1385410:intron | 40.0% | |
ATCGTTGGCACAAGAAAGAA+GGG | - | tig0020748:99876-99895 | None:intergenic | 40.0% | |
TTCGCAAATGGTAAGATCGT+TGG | - | tig0020748:99891-99910 | None:intergenic | 40.0% | |
CTTACCATTTGCGAAGTAAC+TGG | + | tig0020748:99896-99915 | Msa1385410:intron | 40.0% | |
AACTCCAGTTACTTCGCAAA+TGG | - | tig0020748:99903-99922 | None:intergenic | 40.0% | |
!!! | TTACATTTTTCAGGGTCTCG+GGG | - | tig0020748:99970-99989 | None:intergenic | 40.0% |
TTCACTGAATACTAGGCAAG+AGG | - | tig0020748:100089-100108 | None:intergenic | 40.0% | |
! | TTTTGGCAATGCAATGTGGT+TGG | - | tig0020748:100143-100162 | None:intergenic | 40.0% |
!! | TAGGTTTTGGCAATGCAATG+TGG | - | tig0020748:100147-100166 | None:intergenic | 40.0% |
TTTCTTGCGTGATGAACTGT+TGG | - | tig0020748:100268-100287 | None:intergenic | 40.0% | |
AACAGTTCATCACGCAAGAA+AGG | + | tig0020748:100267-100286 | Msa1385410:intron | 40.0% | |
!! | GGTTATGCACCCTTTAGAAT+AGG | - | tig0020748:100615-100634 | None:intergenic | 40.0% |
TTAGTGTGAGCTTATCCATG+CGG | - | tig0020748:100636-100655 | None:intergenic | 40.0% | |
!!! | CTTCTCGTTATTTTTCGGGA+AGG | + | tig0020748:100829-100848 | Msa1385410:intron | 40.0% |
!!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | tig0020748:100988-101007 | None:intergenic | 40.0% |
ACTTTACGTAAGGCAGAGTT+TGG | - | tig0020748:100999-101018 | None:intergenic | 40.0% | |
TACTCTGGCAACTTTACGTA+AGG | - | tig0020748:101009-101028 | None:intergenic | 40.0% | |
AGCAGTGATTTCAAATCCAG+AGG | - | tig0020748:101039-101058 | None:intergenic | 40.0% | |
ACTGCTTATATACCCGGTAT+TGG | + | tig0020748:101053-101072 | Msa1385410:intron | 40.0% | |
! | TCTGTAGTCTTAGTAAGAGG+GGG | + | tig0020748:101095-101114 | Msa1385410:intron | 40.0% |
ACAATGTGATATCTCACACC+AGG | - | tig0020748:101137-101156 | None:intergenic | 40.0% | |
GTGAGATATCACATTGTTCG+AGG | + | tig0020748:101140-101159 | Msa1385410:CDS | 40.0% | |
! | GTTTTACGTCAAGCAATACG+TGG | + | tig0020748:101468-101487 | Msa1385410:CDS | 40.0% |
TTTACGTCAAGCAATACGTG+GGG | + | tig0020748:101470-101489 | Msa1385410:CDS | 40.0% | |
GTAAAAGCAAGACGCGTAAA+CGG | + | tig0020748:101510-101529 | Msa1385410:CDS | 40.0% | |
CATCAAGTTCCCGTTGAAAT+AGG | + | tig0020748:101540-101559 | Msa1385410:CDS | 40.0% | |
TGTGTGGATCCTATTTCAAC+GGG | - | tig0020748:101552-101571 | None:intergenic | 40.0% | |
GTTGAAATAGGATCCACACA+AGG | + | tig0020748:101552-101571 | Msa1385410:CDS | 40.0% | |
! | CTTGCCATTCGTTGGTTATT+AGG | + | tig0020748:101582-101601 | Msa1385410:intron | 40.0% |
! | TATTTCGACCTGGACGTTTT+CGG | - | tig0020748:101614-101633 | None:intergenic | 40.0% |
AAAACGTCCAGGTCGAAATA+TGG | + | tig0020748:101614-101633 | Msa1385410:CDS | 40.0% | |
TTGAAAGCCATATTTCGACC+TGG | - | tig0020748:101624-101643 | None:intergenic | 40.0% | |
TTTGGCAGCATCCACTAATT+CGG | - | tig0020748:101655-101674 | None:intergenic | 40.0% | |
! | AATTAGTGGATGCTGCCAAA+GGG | + | tig0020748:101655-101674 | Msa1385410:CDS | 40.0% |
! | AGTCTCTTCCTTTTTGCGTA+TGG | - | tig0020748:101691-101710 | None:intergenic | 40.0% |
GTGTATATAGATCCTGCTCA+TGG | - | tig0020748:101760-101779 | None:intergenic | 40.0% | |
! | ATGGCTCAACTAAGCACTTT+TGG | + | tig0020748:101889-101908 | Msa1385410:intron | 40.0% |
! | TGGCTCAACTAAGCACTTTT+GGG | + | tig0020748:101890-101909 | Msa1385410:intron | 40.0% |
TTCATGCGCTTCATATTCGC+CGG | + | tig0020748:99320-99339 | Msa1385410:CDS | 45.0% | |
GGGTTGACATAAGGTGGTAT+AGG | - | tig0020748:99374-99393 | None:intergenic | 45.0% | |
GAATGGATAAGAGGCTTGTG+GGG | - | tig0020748:99394-99413 | None:intergenic | 45.0% | |
CGAATGGATAAGAGGCTTGT+GGG | - | tig0020748:99395-99414 | None:intergenic | 45.0% | |
ATGCAACGCGAATGGATAAG+AGG | - | tig0020748:99403-99422 | None:intergenic | 45.0% | |
ATGACGATATGCAACGCGAA+TGG | - | tig0020748:99411-99430 | None:intergenic | 45.0% | |
CAACTGCTCCTATCCGAAAT+AGG | + | tig0020748:99704-99723 | Msa1385410:intron | 45.0% | |
GATCGTTGGCACAAGAAAGA+AGG | - | tig0020748:99877-99896 | None:intergenic | 45.0% | |
!!! | TACATTTTTCAGGGTCTCGG+GGG | - | tig0020748:99969-99988 | None:intergenic | 45.0% |
!! | AGGTTGACCTCCTTGCTTTT+AGG | + | tig0020748:100181-100200 | Msa1385410:CDS | 45.0% |
!! | TGACCTCCTTGCTTTTAGGA+TGG | + | tig0020748:100185-100204 | Msa1385410:CDS | 45.0% |
GTACCATCCTAAAAGCAAGG+AGG | - | tig0020748:100191-100210 | None:intergenic | 45.0% | |
! | TCTTCCATTTTGTCGCTGTG+GGG | - | tig0020748:100239-100258 | None:intergenic | 45.0% |
! | GTCTTCCATTTTGTCGCTGT+GGG | - | tig0020748:100240-100259 | None:intergenic | 45.0% |
! | AGTCTTCCATTTTGTCGCTG+TGG | - | tig0020748:100241-100260 | None:intergenic | 45.0% |
ACAGCGACAAAATGGAAGAC+TGG | + | tig0020748:100240-100259 | Msa1385410:CDS | 45.0% | |
AGCGGGGATCTTTCACAAAA+AGG | + | tig0020748:100586-100605 | Msa1385410:CDS | 45.0% | |
!! | AGGAGGTATTGGGAACGAAT+TGG | + | tig0020748:100690-100709 | Msa1385410:intron | 45.0% |
!!! | CGTTATTTTTCGGGAAGGAG+TGG | + | tig0020748:100834-100853 | Msa1385410:intron | 45.0% |
GAGTGGAGATTATCGAACGA+AGG | + | tig0020748:100851-100870 | Msa1385410:intron | 45.0% | |
TCATGTACGGTTCTGTAGAG+TGG | + | tig0020748:100924-100943 | Msa1385410:intron | 45.0% | |
! | TAGTCTTAGTAAGAGGGGGA+AGG | + | tig0020748:101099-101118 | Msa1385410:intron | 45.0% |
AGTCTTAGTAAGAGGGGGAA+GGG | + | tig0020748:101100-101119 | Msa1385410:intron | 45.0% | |
GGAAGGGTTAAGGATTTACC+TGG | + | tig0020748:101116-101135 | Msa1385410:CDS | 45.0% | |
CTTTACTCCGACAGCATCTA+GGG | - | tig0020748:101168-101187 | None:intergenic | 45.0% | |
! | TCCCTTTTACGCTCATGTCA+CGG | + | tig0020748:101274-101293 | Msa1385410:intron | 45.0% |
GCTTGACGTAAAACGGATAG+TGG | - | tig0020748:101462-101481 | None:intergenic | 45.0% | |
!! | GAAAAGCACTTGCCATTCGT+TGG | + | tig0020748:101574-101593 | Msa1385410:intron | 45.0% |
TGCGCCTAATAACCAACGAA+TGG | - | tig0020748:101589-101608 | None:intergenic | 45.0% | |
! | ATTTCGACCTGGACGTTTTC+GGG | - | tig0020748:101613-101632 | None:intergenic | 45.0% |
! | GAATTAGTGGATGCTGCCAA+AGG | + | tig0020748:101654-101673 | Msa1385410:CDS | 45.0% |
AGAGACTCATAGAATGGCAG+AGG | + | tig0020748:101704-101723 | Msa1385410:CDS | 45.0% | |
! | GGCTCAACTAAGCACTTTTG+GGG | + | tig0020748:101891-101910 | Msa1385410:intron | 45.0% |
TCATGGGTTCTTCTCTCCAT+CGG | - | tig0020748:102215-102234 | None:intergenic | 45.0% | |
TCATGCGCTTCATATTCGCC+GGG | + | tig0020748:99321-99340 | Msa1385410:CDS | 50.0% | |
TATTTATGGGGGGCAACTCC+CGG | - | tig0020748:99342-99361 | None:intergenic | 50.0% | |
CTTGTGGGGTTGACATAAGG+TGG | - | tig0020748:99380-99399 | None:intergenic | 50.0% | |
AGGCTTGTGGGGTTGACATA+AGG | - | tig0020748:99383-99402 | None:intergenic | 50.0% | |
GCGAATGGATAAGAGGCTTG+TGG | - | tig0020748:99396-99415 | None:intergenic | 50.0% | |
TGATGACTTCCACCACGTCA+AGG | + | tig0020748:99483-99502 | Msa1385410:intron | 50.0% | |
! | ACGGAAGGGGTATAACTCAG+CGG | - | tig0020748:99519-99538 | None:intergenic | 50.0% |
!!! | ACATTTTTCAGGGTCTCGGG+GGG | - | tig0020748:99968-99987 | None:intergenic | 50.0% |
! | CTAAAGGGTGCATAACCGCA+TGG | + | tig0020748:100618-100637 | Msa1385410:intron | 50.0% |
ATTGAACGAGGAGCCGTATG+AGG | + | tig0020748:100893-100912 | Msa1385410:intron | 50.0% | |
GGTTCTGTAGAGTGGCAGTA+AGG | + | tig0020748:100932-100951 | Msa1385410:intron | 50.0% | |
TCCAGAGGTTAAGCGTACTC+TGG | - | tig0020748:101024-101043 | None:intergenic | 50.0% | |
AGTAAGAGGGGGAAGGGTTA+AGG | + | tig0020748:101106-101125 | Msa1385410:intron | 50.0% | |
CCTTTACTCCGACAGCATCT+AGG | - | tig0020748:101169-101188 | None:intergenic | 50.0% | |
CCTAGATGCTGTCGGAGTAA+AGG | + | tig0020748:101166-101185 | Msa1385410:CDS | 50.0% | |
GGAGTAAAGGATCGCCAACA+AGG | + | tig0020748:101179-101198 | Msa1385410:CDS | 50.0% | |
GCCGTGACATGAGCGTAAAA+GGG | - | tig0020748:101278-101297 | None:intergenic | 50.0% | |
! | GGCAAGTGCTTTTCCTTGTG+TGG | - | tig0020748:101568-101587 | None:intergenic | 50.0% |
TATGGCATCGCCATTCCCTT+TGG | - | tig0020748:101673-101692 | None:intergenic | 50.0% | |
TGGCGATGCCATACGCAAAA+AGG | + | tig0020748:101680-101699 | Msa1385410:CDS | 50.0% | |
! | AGAGTGTCACCTTGACGTGG+TGG | - | tig0020748:99495-99514 | None:intergenic | 55.0% |
! | GGTAGAGTGTCACCTTGACG+TGG | - | tig0020748:99498-99517 | None:intergenic | 55.0% |
TTCTCGAAGGGGCAACGGAA+GGG | - | tig0020748:99533-99552 | None:intergenic | 55.0% | |
TTTCTCGAAGGGGCAACGGA+AGG | - | tig0020748:99534-99553 | None:intergenic | 55.0% | |
!!! | ATTTTTCAGGGTCTCGGGGG+GGG | - | tig0020748:99966-99985 | None:intergenic | 55.0% |
!!! | CATTTTTCAGGGTCTCGGGG+GGG | - | tig0020748:99967-99986 | None:intergenic | 55.0% |
GACCCACCAAAGCACGAAAG+CGG | + | tig0020748:100568-100587 | Msa1385410:CDS | 55.0% | |
ACCCACCAAAGCACGAAAGC+GGG | + | tig0020748:100569-100588 | Msa1385410:CDS | 55.0% | |
AGATCCCCGCTTTCGTGCTT+TGG | - | tig0020748:100577-100596 | None:intergenic | 55.0% | |
GCCAGAGTACGCTTAACCTC+TGG | + | tig0020748:101020-101039 | Msa1385410:intron | 55.0% | |
CGAGGAACCCTAGATGCTGT+CGG | + | tig0020748:101158-101177 | Msa1385410:CDS | 55.0% | |
CGCCGTGACATGAGCGTAAA+AGG | - | tig0020748:101279-101298 | None:intergenic | 55.0% | |
TTTACGCTCATGTCACGGCG+AGG | + | tig0020748:101279-101298 | Msa1385410:intron | 55.0% | |
GTGGATGCTGCCAAAGGGAA+TGG | + | tig0020748:101660-101679 | Msa1385410:CDS | 55.0% | |
TAACGGCGCTGTTGTTCCGA+TGG | + | tig0020748:102196-102215 | Msa1385410:CDS | 55.0% | |
TCTCGAAGGGGCAACGGAAG+GGG | - | tig0020748:99532-99551 | None:intergenic | 60.0% | |
GCGAGGAGAAAGGCAGCAAG+AGG | - | tig0020748:100217-100236 | None:intergenic | 60.0% | |
! | CATTTTGTCGCTGTGGGGCG+AGG | - | tig0020748:100234-100253 | None:intergenic | 60.0% |
CTCGCCCCACAGCGACAAAA+TGG | + | tig0020748:100232-100251 | Msa1385410:CDS | 60.0% | |
CCCCGCTTTCGTGCTTTGGT+GGG | - | tig0020748:100573-100592 | None:intergenic | 60.0% | |
CCCACCAAAGCACGAAAGCG+GGG | + | tig0020748:100570-100589 | Msa1385410:CDS | 60.0% | |
TCCCCGCTTTCGTGCTTTGG+TGG | - | tig0020748:100574-100593 | None:intergenic | 60.0% | |
TCGCTGTGGGGCGAGGAGAA+AGG | - | tig0020748:100227-100246 | None:intergenic | 65.0% | |
GGCGCATCCCGAAAACGTCC+AGG | + | tig0020748:101603-101622 | Msa1385410:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0020748 | gene | 99306 | 102236 | 99306 | ID=Msa1385410;Name=Msa1385410 |
tig0020748 | mRNA | 99306 | 102236 | 99306 | ID=Msa1385410-mRNA-1;Parent=Msa1385410;Name=Msa1385410-mRNA-1;_AED=0.34;_eAED=0.44;_QI=0|0|0|1|0|0|7|0|336 |
tig0020748 | exon | 99306 | 99458 | 99306 | ID=Msa1385410-mRNA-1:exon:9564;Parent=Msa1385410-mRNA-1 |
tig0020748 | exon | 100181 | 100270 | 100181 | ID=Msa1385410-mRNA-1:exon:9565;Parent=Msa1385410-mRNA-1 |
tig0020748 | exon | 100531 | 100624 | 100531 | ID=Msa1385410-mRNA-1:exon:9566;Parent=Msa1385410-mRNA-1 |
tig0020748 | exon | 101108 | 101200 | 101108 | ID=Msa1385410-mRNA-1:exon:9567;Parent=Msa1385410-mRNA-1 |
tig0020748 | exon | 101355 | 101591 | 101355 | ID=Msa1385410-mRNA-1:exon:9568;Parent=Msa1385410-mRNA-1 |
tig0020748 | exon | 101604 | 101750 | 101604 | ID=Msa1385410-mRNA-1:exon:9569;Parent=Msa1385410-mRNA-1 |
tig0020748 | exon | 102043 | 102236 | 102043 | ID=Msa1385410-mRNA-1:exon:9570;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 99306 | 99458 | 99306 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 100181 | 100270 | 100181 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 100531 | 100624 | 100531 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 101108 | 101200 | 101108 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 101355 | 101591 | 101355 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 101604 | 101750 | 101604 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
tig0020748 | CDS | 102043 | 102236 | 102043 | ID=Msa1385410-mRNA-1:cds;Parent=Msa1385410-mRNA-1 |
Gene Sequence |
Protein sequence |