Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061284.t1 | XP_003605973.1 | 97 | 132 | 1 | 1 | 1 | 132 | 51 | 179 | 4.30E-64 | 253.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061284.t1 | Q9XFB0 | 55.1 | 136 | 48 | 5 | 5 | 132 | 54 | 184 | 1.6e-27 | 123.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061284.t1 | G7JER5 | 97.0 | 132 | 1 | 1 | 1 | 132 | 51 | 179 | 3.1e-64 | 253.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene061284.t1 | TF | C2C2-YABBY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049260 | MS.gene061284 | 0.819943 | 8.91E-53 | -1.69E-46 |
MS.gene049284 | MS.gene061284 | 0.820969 | 5.18E-53 | -1.69E-46 |
MS.gene049346 | MS.gene061284 | 0.815831 | 7.56E-52 | -1.69E-46 |
MS.gene049351 | MS.gene061284 | 0.855513 | 6.00E-62 | -1.69E-46 |
MS.gene049356 | MS.gene061284 | 0.813864 | 2.06E-51 | -1.69E-46 |
MS.gene049369 | MS.gene061284 | 0.811775 | 5.91E-51 | -1.69E-46 |
MS.gene049389 | MS.gene061284 | 0.804134 | 2.50E-49 | -1.69E-46 |
MS.gene049491 | MS.gene061284 | 0.847208 | 1.34E-59 | -1.69E-46 |
MS.gene049599 | MS.gene061284 | -0.810454 | 1.14E-50 | -1.69E-46 |
MS.gene049614 | MS.gene061284 | 0.814539 | 1.46E-51 | -1.69E-46 |
MS.gene049661 | MS.gene061284 | 0.864075 | 1.58E-64 | -1.69E-46 |
MS.gene049662 | MS.gene061284 | 0.861064 | 1.33E-63 | -1.69E-46 |
MS.gene049758 | MS.gene061284 | 0.888016 | 8.58E-73 | -1.69E-46 |
MS.gene050076 | MS.gene061284 | 0.836805 | 7.55E-57 | -1.69E-46 |
MS.gene050099 | MS.gene061284 | 0.839385 | 1.64E-57 | -1.69E-46 |
MS.gene050128 | MS.gene061284 | 0.887412 | 1.46E-72 | -1.69E-46 |
MS.gene050301 | MS.gene061284 | 0.886799 | 2.50E-72 | -1.69E-46 |
MS.gene050397 | MS.gene061284 | 0.876107 | 1.82E-68 | -1.69E-46 |
MS.gene050404 | MS.gene061284 | 0.849072 | 4.09E-60 | -1.69E-46 |
MS.gene050406 | MS.gene061284 | 0.839145 | 1.89E-57 | -1.69E-46 |
MS.gene050432 | MS.gene061284 | 0.826396 | 2.78E-54 | -1.69E-46 |
MS.gene050464 | MS.gene061284 | 0.838762 | 2.37E-57 | -1.69E-46 |
MS.gene050529 | MS.gene061284 | 0.860335 | 2.22E-63 | -1.69E-46 |
MS.gene05053 | MS.gene061284 | 0.805373 | 1.38E-49 | -1.69E-46 |
MS.gene050670 | MS.gene061284 | 0.802742 | 4.86E-49 | -1.69E-46 |
MS.gene050767 | MS.gene061284 | 0.826605 | 2.48E-54 | -1.69E-46 |
MS.gene050770 | MS.gene061284 | 0.829121 | 6.15E-55 | -1.69E-46 |
MS.gene050971 | MS.gene061284 | 0.8444 | 7.74E-59 | -1.69E-46 |
MS.gene05101 | MS.gene061284 | 0.867282 | 1.54E-65 | -1.69E-46 |
MS.gene05105 | MS.gene061284 | 0.822686 | 2.07E-53 | -1.69E-46 |
MS.gene051471 | MS.gene061284 | 0.873043 | 2.00E-67 | -1.69E-46 |
MS.gene051663 | MS.gene061284 | 0.811628 | 6.37E-51 | -1.69E-46 |
MS.gene051692 | MS.gene061284 | 0.804342 | 2.26E-49 | -1.69E-46 |
MS.gene051860 | MS.gene061284 | 0.837205 | 5.96E-57 | -1.69E-46 |
MS.gene051877 | MS.gene061284 | 0.810941 | 8.97E-51 | -1.69E-46 |
MS.gene052077 | MS.gene061284 | 0.817598 | 3.04E-52 | -1.69E-46 |
MS.gene052078 | MS.gene061284 | 0.897942 | 8.61E-77 | -1.69E-46 |
MS.gene052178 | MS.gene061284 | 0.908873 | 1.06E-81 | -1.69E-46 |
MS.gene052188 | MS.gene061284 | 0.875398 | 3.18E-68 | -1.69E-46 |
MS.gene052253 | MS.gene061284 | 0.842387 | 2.67E-58 | -1.69E-46 |
MS.gene052287 | MS.gene061284 | 0.825019 | 5.89E-54 | -1.69E-46 |
MS.gene052290 | MS.gene061284 | 0.83803 | 3.66E-57 | -1.69E-46 |
MS.gene052310 | MS.gene061284 | 0.875716 | 2.47E-68 | -1.69E-46 |
MS.gene052322 | MS.gene061284 | 0.841643 | 4.20E-58 | -1.69E-46 |
MS.gene052326 | MS.gene061284 | 0.852294 | 5.07E-61 | -1.69E-46 |
MS.gene052340 | MS.gene061284 | 0.883157 | 5.69E-71 | -1.69E-46 |
MS.gene052484 | MS.gene061284 | 0.807857 | 4.12E-50 | -1.69E-46 |
MS.gene052485 | MS.gene061284 | 0.834365 | 3.13E-56 | -1.69E-46 |
MS.gene053073 | MS.gene061284 | 0.828996 | 6.59E-55 | -1.69E-46 |
MS.gene053103 | MS.gene061284 | 0.814345 | 1.62E-51 | -1.69E-46 |
MS.gene05316 | MS.gene061284 | 0.83104 | 2.09E-55 | -1.69E-46 |
MS.gene053181 | MS.gene061284 | 0.818881 | 1.56E-52 | -1.69E-46 |
MS.gene053209 | MS.gene061284 | 0.882754 | 7.99E-71 | -1.69E-46 |
MS.gene053322 | MS.gene061284 | 0.809743 | 1.63E-50 | -1.69E-46 |
MS.gene053557 | MS.gene061284 | 0.88089 | 3.78E-70 | -1.69E-46 |
MS.gene053758 | MS.gene061284 | 0.811932 | 5.47E-51 | -1.69E-46 |
MS.gene053836 | MS.gene061284 | 0.860823 | 1.58E-63 | -1.69E-46 |
MS.gene053928 | MS.gene061284 | 0.829681 | 4.49E-55 | -1.69E-46 |
MS.gene054010 | MS.gene061284 | 0.833328 | 5.68E-56 | -1.69E-46 |
MS.gene054011 | MS.gene061284 | 0.859238 | 4.75E-63 | -1.69E-46 |
MS.gene054012 | MS.gene061284 | 0.849994 | 2.26E-60 | -1.69E-46 |
MS.gene054013 | MS.gene061284 | 0.847189 | 1.35E-59 | -1.69E-46 |
MS.gene054123 | MS.gene061284 | 0.849724 | 2.69E-60 | -1.69E-46 |
MS.gene054184 | MS.gene061284 | 0.817125 | 3.88E-52 | -1.69E-46 |
MS.gene054185 | MS.gene061284 | 0.817067 | 4.00E-52 | -1.69E-46 |
MS.gene054214 | MS.gene061284 | 0.830315 | 3.15E-55 | -1.69E-46 |
MS.gene054349 | MS.gene061284 | 0.81758 | 3.06E-52 | -1.69E-46 |
MS.gene054376 | MS.gene061284 | 0.838817 | 2.29E-57 | -1.69E-46 |
MS.gene054473 | MS.gene061284 | 0.803347 | 3.64E-49 | -1.69E-46 |
MS.gene054618 | MS.gene061284 | 0.800756 | 1.24E-48 | -1.69E-46 |
MS.gene054802 | MS.gene061284 | 0.809152 | 2.18E-50 | -1.69E-46 |
MS.gene054803 | MS.gene061284 | 0.807248 | 5.55E-50 | -1.69E-46 |
MS.gene054804 | MS.gene061284 | 0.810063 | 1.39E-50 | -1.69E-46 |
MS.gene054955 | MS.gene061284 | 0.814287 | 1.66E-51 | -1.69E-46 |
MS.gene055116 | MS.gene061284 | 0.854776 | 9.83E-62 | -1.69E-46 |
MS.gene055133 | MS.gene061284 | 0.83511 | 2.03E-56 | -1.69E-46 |
MS.gene055254 | MS.gene061284 | 0.856663 | 2.76E-62 | -1.69E-46 |
MS.gene055277 | MS.gene061284 | 0.898644 | 4.34E-77 | -1.69E-46 |
MS.gene055390 | MS.gene061284 | 0.854278 | 1.37E-61 | -1.69E-46 |
MS.gene055397 | MS.gene061284 | 0.802152 | 6.43E-49 | -1.69E-46 |
MS.gene055422 | MS.gene061284 | 0.892876 | 1.06E-74 | -1.69E-46 |
MS.gene055428 | MS.gene061284 | 0.869584 | 2.78E-66 | -1.69E-46 |
MS.gene055499 | MS.gene061284 | 0.804766 | 1.84E-49 | -1.69E-46 |
MS.gene055604 | MS.gene061284 | 0.860972 | 1.42E-63 | -1.69E-46 |
MS.gene055712 | MS.gene061284 | 0.81682 | 4.54E-52 | -1.69E-46 |
MS.gene055896 | MS.gene061284 | 0.805318 | 1.41E-49 | -1.69E-46 |
MS.gene056191 | MS.gene061284 | 0.872627 | 2.75E-67 | -1.69E-46 |
MS.gene056314 | MS.gene061284 | 0.844619 | 6.76E-59 | -1.69E-46 |
MS.gene056407 | MS.gene061284 | 0.81855 | 1.85E-52 | -1.69E-46 |
MS.gene056410 | MS.gene061284 | 0.861657 | 8.80E-64 | -1.69E-46 |
MS.gene056609 | MS.gene061284 | 0.869257 | 3.55E-66 | -1.69E-46 |
MS.gene056612 | MS.gene061284 | 0.869719 | 2.51E-66 | -1.69E-46 |
MS.gene056659 | MS.gene061284 | 0.83392 | 4.04E-56 | -1.69E-46 |
MS.gene056719 | MS.gene061284 | 0.815895 | 7.31E-52 | -1.69E-46 |
MS.gene056796 | MS.gene061284 | 0.832151 | 1.11E-55 | -1.69E-46 |
MS.gene056902 | MS.gene061284 | 0.809599 | 1.75E-50 | -1.69E-46 |
MS.gene05702 | MS.gene061284 | 0.881742 | 1.86E-70 | -1.69E-46 |
MS.gene057121 | MS.gene061284 | 0.806679 | 7.32E-50 | -1.69E-46 |
MS.gene057123 | MS.gene061284 | 0.803485 | 3.41E-49 | -1.69E-46 |
MS.gene057124 | MS.gene061284 | 0.805295 | 1.43E-49 | -1.69E-46 |
MS.gene057129 | MS.gene061284 | 0.805637 | 1.21E-49 | -1.69E-46 |
MS.gene057245 | MS.gene061284 | 0.807644 | 4.57E-50 | -1.69E-46 |
MS.gene057295 | MS.gene061284 | 0.852761 | 3.74E-61 | -1.69E-46 |
MS.gene05733 | MS.gene061284 | 0.868781 | 5.06E-66 | -1.69E-46 |
MS.gene057396 | MS.gene061284 | 0.806971 | 6.35E-50 | -1.69E-46 |
MS.gene057439 | MS.gene061284 | 0.832374 | 9.81E-56 | -1.69E-46 |
MS.gene057448 | MS.gene061284 | 0.83468 | 2.61E-56 | -1.69E-46 |
MS.gene057449 | MS.gene061284 | 0.8298 | 4.20E-55 | -1.69E-46 |
MS.gene057450 | MS.gene061284 | 0.847116 | 1.42E-59 | -1.69E-46 |
MS.gene057749 | MS.gene061284 | 0.806324 | 8.69E-50 | -1.69E-46 |
MS.gene057754 | MS.gene061284 | 0.804452 | 2.15E-49 | -1.69E-46 |
MS.gene057779 | MS.gene061284 | 0.818125 | 2.31E-52 | -1.69E-46 |
MS.gene057794 | MS.gene061284 | 0.842904 | 1.94E-58 | -1.69E-46 |
MS.gene057796 | MS.gene061284 | 0.882035 | 1.46E-70 | -1.69E-46 |
MS.gene057823 | MS.gene061284 | 0.806758 | 7.04E-50 | -1.69E-46 |
MS.gene058002 | MS.gene061284 | 0.861122 | 1.28E-63 | -1.69E-46 |
MS.gene058082 | MS.gene061284 | 0.879468 | 1.22E-69 | -1.69E-46 |
MS.gene05811 | MS.gene061284 | 0.88439 | 2.00E-71 | -1.69E-46 |
MS.gene058142 | MS.gene061284 | 0.816435 | 5.54E-52 | -1.69E-46 |
MS.gene058233 | MS.gene061284 | 0.830913 | 2.25E-55 | -1.69E-46 |
MS.gene058276 | MS.gene061284 | 0.801286 | 9.67E-49 | -1.69E-46 |
MS.gene058293 | MS.gene061284 | 0.839855 | 1.23E-57 | -1.69E-46 |
MS.gene058365 | MS.gene061284 | 0.832743 | 7.94E-56 | -1.69E-46 |
MS.gene05842 | MS.gene061284 | 0.801427 | 9.05E-49 | -1.69E-46 |
MS.gene058660 | MS.gene061284 | 0.882105 | 1.38E-70 | -1.69E-46 |
MS.gene058710 | MS.gene061284 | 0.807739 | 4.36E-50 | -1.69E-46 |
MS.gene058749 | MS.gene061284 | 0.813458 | 2.53E-51 | -1.69E-46 |
MS.gene058787 | MS.gene061284 | 0.857164 | 1.97E-62 | -1.69E-46 |
MS.gene058845 | MS.gene061284 | 0.828486 | 8.75E-55 | -1.69E-46 |
MS.gene058928 | MS.gene061284 | 0.866703 | 2.35E-65 | -1.69E-46 |
MS.gene058993 | MS.gene061284 | 0.806465 | 8.12E-50 | -1.69E-46 |
MS.gene05907 | MS.gene061284 | 0.869501 | 2.95E-66 | -1.69E-46 |
MS.gene059228 | MS.gene061284 | 0.827018 | 1.97E-54 | -1.69E-46 |
MS.gene059285 | MS.gene061284 | 0.831205 | 1.90E-55 | -1.69E-46 |
MS.gene059294 | MS.gene061284 | 0.887077 | 1.96E-72 | -1.69E-46 |
MS.gene059326 | MS.gene061284 | 0.824232 | 9.03E-54 | -1.69E-46 |
MS.gene059342 | MS.gene061284 | 0.828795 | 7.37E-55 | -1.69E-46 |
MS.gene059366 | MS.gene061284 | 0.817812 | 2.72E-52 | -1.69E-46 |
MS.gene059518 | MS.gene061284 | 0.88177 | 1.82E-70 | -1.69E-46 |
MS.gene059536 | MS.gene061284 | 0.81164 | 6.33E-51 | -1.69E-46 |
MS.gene059597 | MS.gene061284 | 0.86301 | 3.38E-64 | -1.69E-46 |
MS.gene05959 | MS.gene061284 | 0.833631 | 4.77E-56 | -1.69E-46 |
MS.gene059676 | MS.gene061284 | 0.855296 | 6.94E-62 | -1.69E-46 |
MS.gene059688 | MS.gene061284 | 0.858351 | 8.75E-63 | -1.69E-46 |
MS.gene059692 | MS.gene061284 | 0.879475 | 1.21E-69 | -1.69E-46 |
MS.gene059695 | MS.gene061284 | 0.874263 | 7.74E-68 | -1.69E-46 |
MS.gene059708 | MS.gene061284 | 0.847797 | 9.21E-60 | -1.69E-46 |
MS.gene059807 | MS.gene061284 | 0.802699 | 4.96E-49 | -1.69E-46 |
MS.gene05984 | MS.gene061284 | 0.880938 | 3.63E-70 | -1.69E-46 |
MS.gene059894 | MS.gene061284 | 0.90558 | 3.70E-80 | -1.69E-46 |
MS.gene059960 | MS.gene061284 | 0.80567 | 1.19E-49 | -1.69E-46 |
MS.gene059974 | MS.gene061284 | 0.876963 | 9.19E-69 | -1.69E-46 |
MS.gene060005 | MS.gene061284 | 0.84432 | 8.13E-59 | -1.69E-46 |
MS.gene06037 | MS.gene061284 | 0.895609 | 8.15E-76 | -1.69E-46 |
MS.gene060407 | MS.gene061284 | 0.815532 | 8.81E-52 | -1.69E-46 |
MS.gene060476 | MS.gene061284 | 0.838684 | 2.49E-57 | -1.69E-46 |
MS.gene060495 | MS.gene061284 | 0.82443 | 8.11E-54 | -1.69E-46 |
MS.gene060496 | MS.gene061284 | 0.81546 | 9.14E-52 | -1.69E-46 |
MS.gene060800 | MS.gene061284 | 0.81463 | 1.40E-51 | -1.69E-46 |
MS.gene060804 | MS.gene061284 | 0.80511 | 1.56E-49 | -1.69E-46 |
MS.gene060818 | MS.gene061284 | 0.820608 | 6.27E-53 | -1.69E-46 |
MS.gene06090 | MS.gene061284 | 0.800142 | 1.66E-48 | -1.69E-46 |
MS.gene061041 | MS.gene061284 | 0.810208 | 1.29E-50 | -1.69E-46 |
MS.gene061049 | MS.gene061284 | 0.912554 | 1.71E-83 | -1.69E-46 |
MS.gene061051 | MS.gene061284 | -0.852537 | 4.33E-61 | -1.69E-46 |
MS.gene061112 | MS.gene061284 | 0.814996 | 1.16E-51 | -1.69E-46 |
MS.gene061154 | MS.gene061284 | 0.801559 | 8.50E-49 | -1.69E-46 |
MS.gene061200 | MS.gene061284 | 0.802851 | 4.61E-49 | -1.69E-46 |
MS.gene061265 | MS.gene061284 | 0.814536 | 1.47E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061284.t1 | MTR_4g050300 | 96.970 | 132 | 1 | 1 | 1 | 132 | 51 | 179 | 8.55e-90 | 258 |
MS.gene061284.t1 | MTR_2g087740 | 65.972 | 144 | 35 | 6 | 1 | 132 | 54 | 195 | 3.42e-50 | 158 |
MS.gene061284.t1 | MTR_4g114730 | 71.250 | 80 | 22 | 1 | 34 | 112 | 84 | 163 | 1.84e-30 | 108 |
MS.gene061284.t1 | MTR_4g025900 | 92.000 | 50 | 4 | 0 | 63 | 112 | 135 | 184 | 4.97e-28 | 102 |
MS.gene061284.t1 | MTR_4g101660 | 63.291 | 79 | 20 | 2 | 63 | 132 | 130 | 208 | 2.16e-27 | 101 |
MS.gene061284.t1 | MTR_5g034030 | 48.421 | 95 | 39 | 2 | 18 | 107 | 73 | 162 | 1.48e-21 | 85.9 |
MS.gene061284.t1 | MTR_5g046230 | 70.909 | 55 | 14 | 1 | 54 | 106 | 101 | 155 | 4.88e-20 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061284.t1 | AT1G08465 | 55.147 | 136 | 48 | 5 | 5 | 132 | 54 | 184 | 1.81e-39 | 131 |
MS.gene061284.t1 | AT2G45190 | 60.952 | 105 | 30 | 3 | 39 | 132 | 49 | 153 | 1.37e-33 | 115 |
MS.gene061284.t1 | AT2G45190 | 61.538 | 104 | 29 | 3 | 40 | 132 | 114 | 217 | 4.50e-33 | 116 |
MS.gene061284.t1 | AT2G26580 | 65.591 | 93 | 26 | 2 | 31 | 118 | 72 | 163 | 5.60e-30 | 106 |
MS.gene061284.t1 | AT2G26580 | 65.591 | 93 | 26 | 2 | 31 | 118 | 72 | 163 | 5.60e-30 | 106 |
MS.gene061284.t1 | AT4G00180 | 67.089 | 79 | 17 | 1 | 63 | 132 | 120 | 198 | 3.53e-29 | 105 |
MS.gene061284.t1 | AT4G00180 | 67.089 | 79 | 17 | 1 | 63 | 132 | 151 | 229 | 7.53e-29 | 105 |
MS.gene061284.t1 | AT1G23420 | 70.588 | 51 | 15 | 0 | 60 | 110 | 130 | 180 | 1.52e-18 | 78.6 |
MS.gene061284.t1 | AT1G69180 | 66.667 | 48 | 16 | 0 | 59 | 106 | 109 | 156 | 1.76e-18 | 77.4 |
MS.gene061284.t1 | AT1G23420 | 70.588 | 51 | 15 | 0 | 60 | 110 | 161 | 211 | 4.13e-18 | 77.8 |
Find 36 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGCTGATATCTGGATTAC+TGG | 0.287474 | 4.2:+51333311 | None:intergenic |
GCCTCCCTGTGGCTGATATC+TGG | 0.289400 | 4.2:+51333303 | None:intergenic |
GAAGCAAGCAGCAAGGAAAT+TGG | 0.345303 | 4.2:-51334885 | MS.gene061284:CDS |
GGAGGAAATTCAAAGGATTA+AGG | 0.377485 | 4.2:-51333334 | MS.gene061284:CDS |
CATTTCCCTCATATTCACTT+TGG | 0.399992 | 4.2:-51331666 | MS.gene061284:CDS |
ATTTCCCTCATATTCACTTT+GGG | 0.416154 | 4.2:-51331665 | MS.gene061284:CDS |
AAATAACTTACTTAATGAAC+CGG | 0.422652 | 4.2:+51333755 | None:intergenic |
GGGAGTTGAGGAGGAGGAAA+TGG | 0.440779 | 4.2:+51336779 | None:intergenic |
TGCTTCCCAAAGTGAATATG+AGG | 0.444364 | 4.2:+51331660 | None:intergenic |
GGGACTCGTGAAAAGACTAA+TGG | 0.445379 | 4.2:-51331612 | MS.gene061284:CDS |
CGACGAATGGGAGGAATCCT+AGG | 0.445790 | 4.2:+51334801 | None:intergenic |
GTGTTCCTTCTGCTTACAAC+CGG | 0.449198 | 4.2:-51333774 | MS.gene061284:CDS |
TGGGAAGCAGCAAGCAAAGT+TGG | 0.453770 | 4.2:-51331646 | MS.gene061284:CDS |
TCCTCCTCCTCAACTCCCTC+AGG | 0.474865 | 4.2:-51336774 | MS.gene061284:intron |
CAACAAAATAGCATCATTTG+AGG | 0.493091 | 4.2:-51334844 | MS.gene061284:CDS |
AGAGTGTGACTCACGACGAA+TGG | 0.516345 | 4.2:+51334788 | None:intergenic |
TAGTAGAGCACGAACATCCT+AGG | 0.516780 | 4.2:-51334818 | MS.gene061284:CDS |
GAGTGTGACTCACGACGAAT+GGG | 0.531160 | 4.2:+51334789 | None:intergenic |
ACCTGAGGGAGTTGAGGAGG+AGG | 0.539948 | 4.2:+51336773 | None:intergenic |
TGAATTATGTGCTGTTTCTG+TGG | 0.544740 | 4.2:+51334912 | None:intergenic |
GGAGGAAATGGCTGAAGTAA+TGG | 0.547935 | 4.2:+51336791 | None:intergenic |
CAGCAAGCAAAGTTGGATCA+TGG | 0.562735 | 4.2:-51331639 | MS.gene061284:CDS |
GCAAAGTTGGATCATGGTGA+AGG | 0.573037 | 4.2:-51331633 | MS.gene061284:CDS |
AAACATACCTGAGGGAGTTG+AGG | 0.577695 | 4.2:+51336767 | None:intergenic |
ATGAACCGGTTGTAAGCAGA+AGG | 0.582569 | 4.2:+51333769 | None:intergenic |
GTAATCCAGATATCAGCCAC+AGG | 0.588300 | 4.2:-51333308 | MS.gene061284:CDS |
CAAAGTTGGATCATGGTGAA+GGG | 0.606710 | 4.2:-51331632 | MS.gene061284:CDS |
TTTGCAGGGAGGAAATTCAA+AGG | 0.611419 | 4.2:-51333341 | MS.gene061284:intron |
CTGAGCTGAAAGCCTCCCTG+TGG | 0.623676 | 4.2:+51333292 | None:intergenic |
CAGGGAGGCTTTCAGCTCAG+CGG | 0.634037 | 4.2:-51333289 | MS.gene061284:CDS |
CATACCTGAGGGAGTTGAGG+AGG | 0.635233 | 4.2:+51336770 | None:intergenic |
TGTGACTCACGACGAATGGG+AGG | 0.645995 | 4.2:+51334792 | None:intergenic |
TCATGAAGAAGCAAGCAGCA+AGG | 0.659976 | 4.2:-51334892 | MS.gene061284:CDS |
GCTTCCCAAAGTGAATATGA+GGG | 0.661736 | 4.2:+51331661 | None:intergenic |
TCCAGATATCAGCCACAGGG+AGG | 0.683704 | 4.2:-51333304 | MS.gene061284:CDS |
TAATCCAGATATCAGCCACA+GGG | 0.696359 | 4.2:-51333307 | MS.gene061284:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAATTTATAAA+AGG | + | chr4.2:51332224-51332243 | None:intergenic | 0.0% |
!!! | ATAAATTTTTTTTTTTTTTT+AGG | - | chr4.2:51332227-51332246 | MS.gene061284:intron | 0.0% |
!!! | TTTTATATATAAAAAAAAAA+AGG | + | chr4.2:51332798-51332817 | None:intergenic | 0.0% |
!! | AAATAAATAAATAGAAACAT+TGG | + | chr4.2:51334946-51334965 | None:intergenic | 10.0% |
!! | CTATTAAAAAAACATAAATT+AGG | + | chr4.2:51332522-51332541 | None:intergenic | 10.0% |
!! | TAAAATAAATAAATTAGCTA+TGG | - | chr4.2:51332404-51332423 | MS.gene061284:intron | 10.0% |
!! | TGATATTATATTAAAAATAG+TGG | - | chr4.2:51335333-51335352 | MS.gene061284:intron | 10.0% |
!!! | AATTTGTTACTTAAAAATAA+TGG | + | chr4.2:51333928-51333947 | None:intergenic | 10.0% |
!!! | ATTTTTTTTTTTTTTTAGGA+TGG | - | chr4.2:51332231-51332250 | MS.gene061284:intron | 10.0% |
!!! | CAAAATTTTTTATAAAAAAC+TGG | + | chr4.2:51333142-51333161 | None:intergenic | 10.0% |
!!! | TAATTTTTGTATTAACTTTT+TGG | - | chr4.2:51333636-51333655 | MS.gene061284:intron | 10.0% |
!!! | TGTTTTGTATATATTTATAT+AGG | - | chr4.2:51333954-51333973 | MS.gene061284:intron | 10.0% |
!!! | TTAATAGTAAAAATGATTTT+TGG | - | chr4.2:51332535-51332554 | MS.gene061284:intron | 10.0% |
!!! | TTTTTTTTTTTGACAAATAA+AGG | - | chr4.2:51335465-51335484 | MS.gene061284:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTAGGAT+GGG | - | chr4.2:51332232-51332251 | MS.gene061284:intron | 10.0% |
!! | AATTAGCAATAGATTAATTA+AGG | + | chr4.2:51333465-51333484 | None:intergenic | 15.0% |
!! | ATGACTAAAAAAAAATCTAA+AGG | - | chr4.2:51336496-51336515 | MS.gene061284:intron | 15.0% |
!! | ATTTATATACACAAATTCTA+TGG | - | chr4.2:51332744-51332763 | MS.gene061284:intron | 15.0% |
!! | GTAAATATCGTAAAAAAAAA+AGG | - | chr4.2:51335310-51335329 | MS.gene061284:intron | 15.0% |
!! | TCAACTAAAACTATAATATA+TGG | + | chr4.2:51336656-51336675 | None:intergenic | 15.0% |
!!! | AAATTAGTAAGTACATATTT+TGG | + | chr4.2:51332009-51332028 | None:intergenic | 15.0% |
!!! | AGCTAATTTATTTATTTTAG+TGG | + | chr4.2:51332403-51332422 | None:intergenic | 15.0% |
!!! | ATTTTTGGTAAAAACAAAAA+GGG | - | chr4.2:51332550-51332569 | MS.gene061284:intron | 15.0% |
!!! | GTAAAAATAGTTTTTTTTTG+TGG | + | chr4.2:51333112-51333131 | None:intergenic | 15.0% |
!!! | TATACTGAAGTTTTATTTTT+TGG | - | chr4.2:51332679-51332698 | MS.gene061284:intron | 15.0% |
!!! | TGTTATTTGCTTTAATTAAA+CGG | + | chr4.2:51335022-51335041 | None:intergenic | 15.0% |
!!! | TTATTTTTCTGTTAATTAGT+GGG | + | chr4.2:51336575-51336594 | None:intergenic | 15.0% |
!!! | TTTAAGTCTTTTTGTTTTTA+CGG | - | chr4.2:51335512-51335531 | MS.gene061284:intron | 15.0% |
!!! | TTTTATTTAATTGTGTCATT+TGG | + | chr4.2:51333229-51333248 | None:intergenic | 15.0% |
!!! | TTTTTCTTCATCAATTTATT+TGG | - | chr4.2:51333995-51334014 | MS.gene061284:intron | 15.0% |
!!! | TTTTTTTTTTTTTTAGGATG+GGG | - | chr4.2:51332233-51332252 | MS.gene061284:intron | 15.0% |
!! | AAAATAATTTCTTCCTCTAT+CGG | - | chr4.2:51335689-51335708 | MS.gene061284:intron | 20.0% |
!! | AAACTATAATATATGGCATA+TGG | + | chr4.2:51336649-51336668 | None:intergenic | 20.0% |
!! | AAATAACTTACTTAATGAAC+CGG | + | chr4.2:51334650-51334669 | None:intergenic | 20.0% |
!! | AAGAAAAAAAATTCCCAAAT+TGG | + | chr4.2:51333983-51334002 | None:intergenic | 20.0% |
!! | AATGACATAAAAGAGATATT+TGG | + | chr4.2:51332878-51332897 | None:intergenic | 20.0% |
!! | ACTAAAAAAAAATCTAAAGG+TGG | - | chr4.2:51336499-51336518 | MS.gene061284:intron | 20.0% |
!! | AGAAAAAAAATTCCCAAATT+GGG | + | chr4.2:51333982-51334001 | None:intergenic | 20.0% |
!! | ATATGTTTATATATATGCAG+TGG | - | chr4.2:51336710-51336729 | MS.gene061284:intron | 20.0% |
!! | CATTACATCAAATTATTATG+CGG | - | chr4.2:51335547-51335566 | MS.gene061284:intron | 20.0% |
!! | CTAAATTTGAATAAACAAAG+AGG | - | chr4.2:51333687-51333706 | MS.gene061284:intron | 20.0% |
!! | GTATATAGTTGAACTTATTA+AGG | - | chr4.2:51332193-51332212 | MS.gene061284:intron | 20.0% |
!! | GTGTATTTAATACATTGAAA+AGG | + | chr4.2:51332048-51332067 | None:intergenic | 20.0% |
!! | TATGTTTATATATATGCAGT+GGG | - | chr4.2:51336711-51336730 | MS.gene061284:intron | 20.0% |
!! | TGACATTGTTATAATCTTAA+AGG | + | chr4.2:51332334-51332353 | None:intergenic | 20.0% |
!! | TGCAATATTAATGTTCAAAT+GGG | - | chr4.2:51336461-51336480 | MS.gene061284:intron | 20.0% |
!! | TGGTAATTAATTATTGACAT+TGG | - | chr4.2:51334156-51334175 | MS.gene061284:intron | 20.0% |
!! | TGTTTCATATTCATCTTATT+TGG | - | chr4.2:51331653-51331672 | MS.gene061284:CDS | 20.0% |
!! | TTTGTGTATATAAATTAGAG+TGG | + | chr4.2:51332739-51332758 | None:intergenic | 20.0% |
!!! | AAAATAGTTTTTTTTTGTGG+TGG | + | chr4.2:51333109-51333128 | None:intergenic | 20.0% |
!!! | AAATTATTTTGTTGGAAGTT+AGG | + | chr4.2:51335679-51335698 | None:intergenic | 20.0% |
!!! | AACTTCAGTATAATTTTTGA+AGG | + | chr4.2:51332671-51332690 | None:intergenic | 20.0% |
!!! | ACACTCAAATACTATTTTTA+CGG | - | chr4.2:51333014-51333033 | MS.gene061284:intron | 20.0% |
!!! | AGTCTACTTTTAAATTAGTT+TGG | + | chr4.2:51335276-51335295 | None:intergenic | 20.0% |
!!! | ATAGAAACATTGGTAAATTT+TGG | + | chr4.2:51334936-51334955 | None:intergenic | 20.0% |
!!! | ATATTTATTTTTGAGAGTCA+TGG | - | chr4.2:51334136-51334155 | MS.gene061284:intron | 20.0% |
!!! | ATTTTAGAGTACTTTTCTTT+AGG | - | chr4.2:51334984-51335003 | MS.gene061284:intron | 20.0% |
!!! | CTACATGATTATTTTTAGAA+AGG | + | chr4.2:51331749-51331768 | None:intergenic | 20.0% |
!!! | CTATTAGGTCTTTTTTTATA+CGG | + | chr4.2:51335212-51335231 | None:intergenic | 20.0% |
!!! | CTTATTTTTCTGTTAATTAG+TGG | + | chr4.2:51336576-51336595 | None:intergenic | 20.0% |
!!! | GAGTAAAAACTTTTTTTAGA+AGG | - | chr4.2:51332826-51332845 | MS.gene061284:intron | 20.0% |
!!! | GATTTTTGGTAAAAACAAAA+AGG | - | chr4.2:51332549-51332568 | MS.gene061284:intron | 20.0% |
!!! | GCTTATATGTATTTTTTGTA+GGG | + | chr4.2:51334858-51334877 | None:intergenic | 20.0% |
!!! | TATTAGGTCTTTTTTTATAC+GGG | + | chr4.2:51335211-51335230 | None:intergenic | 20.0% |
!!! | TGATTTTTAGTAGAATACAA+TGG | - | chr4.2:51336528-51336547 | MS.gene061284:intron | 20.0% |
!!! | TGCTTATATGTATTTTTTGT+AGG | + | chr4.2:51334859-51334878 | None:intergenic | 20.0% |
!!! | TTAAAAAGCTTTTGATAACA+TGG | - | chr4.2:51336366-51336385 | MS.gene061284:intron | 20.0% |
!!! | TTAATTAGTGGGTAATATAT+GGG | + | chr4.2:51336564-51336583 | None:intergenic | 20.0% |
!!! | TTGCTTTTTATTTGAAGAAA+GGG | - | chr4.2:51334820-51334839 | MS.gene061284:CDS | 20.0% |
!!! | TTGGTAAAGAATCTAATTTT+GGG | - | chr4.2:51336172-51336191 | MS.gene061284:intron | 20.0% |
!!! | TTTGCTTTTTATTTGAAGAA+AGG | - | chr4.2:51334819-51334838 | MS.gene061284:CDS | 20.0% |
!!! | TTTGGTAAAGAATCTAATTT+TGG | - | chr4.2:51336171-51336190 | MS.gene061284:intron | 20.0% |
! | AAACACAATGAATACGAATA+CGG | - | chr4.2:51336275-51336294 | MS.gene061284:intron | 25.0% |
! | AAACCATTTGATCATATTGT+AGG | - | chr4.2:51335842-51335861 | MS.gene061284:intron | 25.0% |
! | AAATAATTTCTTCCTCTATC+GGG | - | chr4.2:51335690-51335709 | MS.gene061284:intron | 25.0% |
! | ATCGTCTATAATTTAACTCT+TGG | - | chr4.2:51336391-51336410 | MS.gene061284:intron | 25.0% |
! | ATTTATATAGGTTCCCAATT+TGG | - | chr4.2:51333966-51333985 | MS.gene061284:intron | 25.0% |
! | CGCATAATAATTTGATGTAA+TGG | + | chr4.2:51335549-51335568 | None:intergenic | 25.0% |
! | CGTATAAAAAAAGACCTAAT+AGG | - | chr4.2:51335210-51335229 | MS.gene061284:intron | 25.0% |
! | CTATAATTTAACTCTTGGTA+AGG | - | chr4.2:51336396-51336415 | MS.gene061284:intron | 25.0% |
! | CTTGAAGAAATGGTTAATTT+AGG | + | chr4.2:51334295-51334314 | None:intergenic | 25.0% |
! | GTGCAATATTAATGTTCAAA+TGG | - | chr4.2:51336460-51336479 | MS.gene061284:intron | 25.0% |
! | TAAGTTCAACTATATACACT+AGG | + | chr4.2:51332190-51332209 | None:intergenic | 25.0% |
! | TATAGAATGAATACAAAGCT+TGG | - | chr4.2:51335630-51335649 | MS.gene061284:intron | 25.0% |
! | TATGGTTGAGCAAATTAAAA+CGG | + | chr4.2:51336631-51336650 | None:intergenic | 25.0% |
! | TGATGCTTAATTTATTGAGT+CGG | - | chr4.2:51333899-51333918 | MS.gene061284:intron | 25.0% |
! | TGGTAATTGTAAACTATTAC+TGG | - | chr4.2:51334176-51334195 | MS.gene061284:intron | 25.0% |
! | TGTTATAATCTTAAAGGTGA+AGG | + | chr4.2:51332328-51332347 | None:intergenic | 25.0% |
! | TTGAGATATATTGCATCTAA+TGG | + | chr4.2:51335990-51336009 | None:intergenic | 25.0% |
! | TTTATATAGGTTCCCAATTT+GGG | - | chr4.2:51333967-51333986 | MS.gene061284:intron | 25.0% |
! | TTTGACAAACTAGTAGATTA+AGG | + | chr4.2:51334423-51334442 | None:intergenic | 25.0% |
!! | ATCAAATGGTTTTTGATCAA+AGG | + | chr4.2:51335834-51335853 | None:intergenic | 25.0% |
!! | ATTTTATGTGTAAGAACCAA+TGG | - | chr4.2:51332582-51332601 | MS.gene061284:intron | 25.0% |
!! | CTTTCTCATTTTCTCATTAT+AGG | - | chr4.2:51332441-51332460 | MS.gene061284:intron | 25.0% |
!! | GATAGTGAAATAATGCTTTT+AGG | - | chr4.2:51333391-51333410 | MS.gene061284:intron | 25.0% |
!! | GTTAATTAGTGGGTAATATA+TGG | + | chr4.2:51336565-51336584 | None:intergenic | 25.0% |
!! | TAATTAGTGGGTAATATATG+GGG | + | chr4.2:51336563-51336582 | None:intergenic | 25.0% |
!! | TACTAGTTTGTCAAAAAATG+AGG | - | chr4.2:51334428-51334447 | MS.gene061284:intron | 25.0% |
!! | TGGTAAAGAATCTAATTTTG+GGG | - | chr4.2:51336173-51336192 | MS.gene061284:intron | 25.0% |
!! | TTTTGATCAAAGGTTTAAGA+TGG | + | chr4.2:51335824-51335843 | None:intergenic | 25.0% |
!!! | AAATAATGCTTTTAGGAGTT+AGG | - | chr4.2:51333398-51333417 | MS.gene061284:intron | 25.0% |
!!! | AGAGGAAGAAATTATTTTGT+TGG | + | chr4.2:51335687-51335706 | None:intergenic | 25.0% |
!!! | ATGGTTAATTTAGGTTTTCT+TGG | + | chr4.2:51334286-51334305 | None:intergenic | 25.0% |
!!! | CGTATTCATTGTGTTTTTAT+CGG | + | chr4.2:51336271-51336290 | None:intergenic | 25.0% |
!!! | GAATATAAGTTTTAAGACTG+AGG | + | chr4.2:51335741-51335760 | None:intergenic | 25.0% |
!!! | GTGGAATATTTTTTCCTATT+AGG | + | chr4.2:51335227-51335246 | None:intergenic | 25.0% |
!!! | GTTTTGAGTTTGAAGATTAA+AGG | - | chr4.2:51335432-51335451 | MS.gene061284:intron | 25.0% |
!!! | TATTTATTTTAGTGGTGTGT+TGG | + | chr4.2:51332395-51332414 | None:intergenic | 25.0% |
!!! | TGTTTTTTCTCATTTCATGA+AGG | + | chr4.2:51335967-51335986 | None:intergenic | 25.0% |
!!! | TTTTTTGACATTGAACCATA+TGG | - | chr4.2:51333272-51333291 | MS.gene061284:intron | 25.0% |
!!! | TTTTTTTAGAAGGAAAACGA+AGG | - | chr4.2:51332836-51332855 | MS.gene061284:intron | 25.0% |
AACACAATGAATACGAATAC+GGG | - | chr4.2:51336276-51336295 | MS.gene061284:intron | 30.0% | |
AATTACATTCAATGCAGACA+CGG | - | chr4.2:51335771-51335790 | MS.gene061284:intron | 30.0% | |
ACATGCAGTTGCTATAATAA+AGG | - | chr4.2:51331889-51331908 | MS.gene061284:intron | 30.0% | |
ATCTTCAAGAATTATCACGA+AGG | + | chr4.2:51331922-51331941 | None:intergenic | 30.0% | |
ATGAATATGAAACATACCTG+AGG | + | chr4.2:51331647-51331666 | None:intergenic | 30.0% | |
ATGCAATATATCTCAAAACG+AGG | - | chr4.2:51335994-51336013 | MS.gene061284:intron | 30.0% | |
ATGCATAAAATATGCAAGGT+TGG | - | chr4.2:51333069-51333088 | MS.gene061284:intron | 30.0% | |
ATTAAAACACAACATTGCCA+TGG | - | chr4.2:51336029-51336048 | MS.gene061284:intron | 30.0% | |
ATTTCCCTCATATTCACTTT+GGG | - | chr4.2:51336737-51336756 | MS.gene061284:intron | 30.0% | |
ATTTGTCTTGCTTGAAGAAA+TGG | + | chr4.2:51334305-51334324 | None:intergenic | 30.0% | |
CAACAAAATAGCATCATTTG+AGG | - | chr4.2:51333558-51333577 | MS.gene061284:intron | 30.0% | |
CAATGTCAAAAAAGCTTCTA+AGG | + | chr4.2:51333265-51333284 | None:intergenic | 30.0% | |
GACAATGCATAAAATATGCA+AGG | - | chr4.2:51333065-51333084 | MS.gene061284:intron | 30.0% | |
GCATATTTCATACTTTCATG+AGG | - | chr4.2:51335408-51335427 | MS.gene061284:intron | 30.0% | |
GGAAGTTAGGATACAAAATT+TGG | + | chr4.2:51335666-51335685 | None:intergenic | 30.0% | |
GTATTCTACTAAAAATCACG+AGG | + | chr4.2:51336526-51336545 | None:intergenic | 30.0% | |
TACCTAAAGAAACAAACCAT+TGG | + | chr4.2:51332601-51332620 | None:intergenic | 30.0% | |
TATTATAGCAACTGCATGTA+TGG | + | chr4.2:51331888-51331907 | None:intergenic | 30.0% | |
TCTCCTACAATATGATCAAA+TGG | + | chr4.2:51335848-51335867 | None:intergenic | 30.0% | |
TCTTCAAGCAAGACAAATAA+AGG | - | chr4.2:51334307-51334326 | MS.gene061284:intron | 30.0% | |
TGAATATGAAACATACCTGA+GGG | + | chr4.2:51331646-51331665 | None:intergenic | 30.0% | |
TGCATAAAATATGCAAGGTT+GGG | - | chr4.2:51333070-51333089 | MS.gene061284:intron | 30.0% | |
TTAGGGAGAGAAATTTAGAA+CGG | + | chr4.2:51332504-51332523 | None:intergenic | 30.0% | |
TTGATACCACATCAATTTGT+TGG | + | chr4.2:51331833-51331852 | None:intergenic | 30.0% | |
TTGGACTTTAATTCAATGAG+AGG | + | chr4.2:51332376-51332395 | None:intergenic | 30.0% | |
TTTGTCATGTTCATGTAACA+TGG | + | chr4.2:51332147-51332166 | None:intergenic | 30.0% | |
! | AATTAGTGGGTAATATATGG+GGG | + | chr4.2:51336562-51336581 | None:intergenic | 30.0% |
! | TTGATTTCATAGGCATTTTC+AGG | - | chr4.2:51335925-51335944 | MS.gene061284:intron | 30.0% |
! | TTTTAATATTGTGCCTTCTC+AGG | + | chr4.2:51335592-51335611 | None:intergenic | 30.0% |
!! | AACCAATGGTTTGTTTCTTT+AGG | - | chr4.2:51332596-51332615 | MS.gene061284:intron | 30.0% |
!! | AGAATCTAATTTTGGGGATT+AGG | - | chr4.2:51336179-51336198 | MS.gene061284:intron | 30.0% |
!! | AGACACGGTTTGATTTTTAA+TGG | - | chr4.2:51335786-51335805 | MS.gene061284:intron | 30.0% |
!! | AGTACATATTTTGGAAGTCA+CGG | + | chr4.2:51332000-51332019 | None:intergenic | 30.0% |
!! | GAATCTAATTTTGGGGATTA+GGG | - | chr4.2:51336180-51336199 | MS.gene061284:intron | 30.0% |
!!! | ATTGTGGTTGAATCCTTTTT+TGG | + | chr4.2:51335875-51335894 | None:intergenic | 30.0% |
!!! | TCTTTGGAATGAAAGCTTTT+TGG | - | chr4.2:51336153-51336172 | MS.gene061284:intron | 30.0% |
!!! | TTTTTTTTTAGGATGGGGAA+GGG | - | chr4.2:51332238-51332257 | MS.gene061284:intron | 30.0% |
!!! | TTTTTTTTTTAGGATGGGGA+AGG | - | chr4.2:51332237-51332256 | MS.gene061284:intron | 30.0% |
AATTAACACGCCTTCATGTA+GGG | - | chr4.2:51336438-51336457 | MS.gene061284:intron | 35.0% | |
ACACAATGAATACGAATACG+GGG | - | chr4.2:51336277-51336296 | MS.gene061284:intron | 35.0% | |
ACACTATCCCAATACAAAGA+GGG | - | chr4.2:51332115-51332134 | MS.gene061284:intron | 35.0% | |
AGAATGAATACAAAGCTTGG+AGG | - | chr4.2:51335633-51335652 | MS.gene061284:intron | 35.0% | |
AGGATGACAGCAATGAATTA+AGG | + | chr4.2:51334067-51334086 | None:intergenic | 35.0% | |
ATGTGTGATTGTTGTCATTC+AGG | + | chr4.2:51333732-51333751 | None:intergenic | 35.0% | |
ATTTCCTCTAACCTCAAAGA+GGG | + | chr4.2:51331681-51331700 | None:intergenic | 35.0% | |
CAAGACAAATAAAGGACTCT+GGG | - | chr4.2:51334315-51334334 | MS.gene061284:intron | 35.0% | |
CATTTCCCTCATATTCACTT+TGG | - | chr4.2:51336736-51336755 | MS.gene061284:intron | 35.0% | |
CTCCTAACAAAAGTGGTAAA+TGG | + | chr4.2:51333311-51333330 | None:intergenic | 35.0% | |
CTTCATCAATTTATTTGGCC+CGG | - | chr4.2:51334000-51334019 | MS.gene061284:intron | 35.0% | |
GACAGCAATGAATTAAGGAT+GGG | + | chr4.2:51334062-51334081 | None:intergenic | 35.0% | |
GCATAAAATATGCAAGGTTG+GGG | - | chr4.2:51333071-51333090 | MS.gene061284:intron | 35.0% | |
GGAGGAAATTCAAAGGATTA+AGG | - | chr4.2:51335068-51335087 | MS.gene061284:intron | 35.0% | |
GGAGTATATACACATCCATA+TGG | + | chr4.2:51333290-51333309 | None:intergenic | 35.0% | |
GGATGAATCGGAAAAATCTT+TGG | - | chr4.2:51336137-51336156 | MS.gene061284:intron | 35.0% | |
GGTAAAGATGTTTGAGAAAC+AGG | - | chr4.2:51336240-51336259 | MS.gene061284:intron | 35.0% | |
GGTGAAGGTTCAAATATTCA+AGG | + | chr4.2:51332313-51332332 | None:intergenic | 35.0% | |
TAATATTGCACCCTACATGA+AGG | + | chr4.2:51336451-51336470 | None:intergenic | 35.0% | |
TAGCTAGAATAGAGTAGCAT+AGG | - | chr4.2:51333801-51333820 | MS.gene061284:intron | 35.0% | |
TCAAATTATTATGCGGTGCT+AGG | - | chr4.2:51335554-51335573 | MS.gene061284:intron | 35.0% | |
TCTTTGCGAGAGACATATTA+AGG | - | chr4.2:51335379-51335398 | MS.gene061284:intron | 35.0% | |
TGACAGCAATGAATTAAGGA+TGG | + | chr4.2:51334063-51334082 | None:intergenic | 35.0% | |
TGCAACTAGCAAACAAGATT+GGG | + | chr4.2:51334722-51334741 | None:intergenic | 35.0% | |
TGTGTGATTGTTGTCATTCA+GGG | + | chr4.2:51333731-51333750 | None:intergenic | 35.0% | |
TTAGGACACTCATTAGCAAA+AGG | + | chr4.2:51331969-51331988 | None:intergenic | 35.0% | |
! | AAGAGTTCAAGTTAAAGGTG+TGG | + | chr4.2:51335363-51335382 | None:intergenic | 35.0% |
! | ACTCTTCTATCACTGTCTTT+TGG | + | chr4.2:51335250-51335269 | None:intergenic | 35.0% |
! | ATGTCTTTTCTCTATAGCTG+TGG | + | chr4.2:51334607-51334626 | None:intergenic | 35.0% |
! | CAAATTATTATGCGGTGCTA+GGG | - | chr4.2:51335555-51335574 | MS.gene061284:intron | 35.0% |
! | CTCTTCTATCACTGTCTTTT+GGG | + | chr4.2:51335249-51335268 | None:intergenic | 35.0% |
! | GTTGAAAACATCGATTGACA+CGG | - | chr4.2:51336219-51336238 | MS.gene061284:intron | 35.0% |
! | TCGCAAAGAGTTCAAGTTAA+AGG | + | chr4.2:51335368-51335387 | None:intergenic | 35.0% |
!! | AAAGGACTCTGGGATAAAAT+TGG | - | chr4.2:51334325-51334344 | MS.gene061284:intron | 35.0% |
!! | CTCCATTTACCACTTTTGTT+AGG | - | chr4.2:51333306-51333325 | MS.gene061284:CDS | 35.0% |
!! | TCAACACTACTATTTTCGAG+TGG | - | chr4.2:51334769-51334788 | MS.gene061284:intron | 35.0% |
!! | TGAATTATGTGCTGTTTCTG+TGG | + | chr4.2:51333493-51333512 | None:intergenic | 35.0% |
!! | TGTTGGCATGTTGATTTCAT+AGG | - | chr4.2:51335915-51335934 | MS.gene061284:intron | 35.0% |
!!! | AGTTTTTTTTTGTGGTGGCT+GGG | + | chr4.2:51333104-51333123 | None:intergenic | 35.0% |
!!! | TAGTTTTTTTTTGTGGTGGC+TGG | + | chr4.2:51333105-51333124 | None:intergenic | 35.0% |
AAAACACAACATTGCCATGG+TGG | - | chr4.2:51336032-51336051 | MS.gene061284:intron | 40.0% | |
AACTGCATGTATGGTAAGTG+GGG | + | chr4.2:51331879-51331898 | None:intergenic | 40.0% | |
ATATTGTGCCTTCTCAGGAA+TGG | + | chr4.2:51335587-51335606 | None:intergenic | 40.0% | |
ATGCATGCATGTGTTCTACT+AGG | + | chr4.2:51334094-51334113 | None:intergenic | 40.0% | |
ATTAGGGTCGAAAGCGATTT+GGG | - | chr4.2:51336196-51336215 | MS.gene061284:intron | 40.0% | |
CAAAGAGGCAACTACTAACT+AGG | - | chr4.2:51333702-51333721 | MS.gene061284:intron | 40.0% | |
CAAAGTTGGATCATGGTGAA+GGG | - | chr4.2:51336770-51336789 | MS.gene061284:intron | 40.0% | |
CAACTGCATGTATGGTAAGT+GGG | + | chr4.2:51331880-51331899 | None:intergenic | 40.0% | |
CAATTAACACGCCTTCATGT+AGG | - | chr4.2:51336437-51336456 | MS.gene061284:intron | 40.0% | |
CATCACTCTCCTAACAAAAG+TGG | + | chr4.2:51333318-51333337 | None:intergenic | 40.0% | |
CATTTCCTCTAACCTCAAAG+AGG | + | chr4.2:51331682-51331701 | None:intergenic | 40.0% | |
CTATCAACAAGATCCAGATG+CGG | - | chr4.2:51336104-51336123 | MS.gene061284:intron | 40.0% | |
CTGCAACTAGCAAACAAGAT+TGG | + | chr4.2:51334723-51334742 | None:intergenic | 40.0% | |
CTGGTACTTCAGTTAGTGAT+CGG | - | chr4.2:51334195-51334214 | MS.gene061284:intron | 40.0% | |
GACACTATCCCAATACAAAG+AGG | - | chr4.2:51332114-51332133 | MS.gene061284:intron | 40.0% | |
GCAAGACAAATAAAGGACTC+TGG | - | chr4.2:51334314-51334333 | MS.gene061284:intron | 40.0% | |
GCATCTGGATCTTGTTGATA+GGG | + | chr4.2:51336105-51336124 | None:intergenic | 40.0% | |
GCTTCCCAAAGTGAATATGA+GGG | + | chr4.2:51336744-51336763 | None:intergenic | 40.0% | |
GTCTACTCCCTCTTTGTATT+GGG | + | chr4.2:51332125-51332144 | None:intergenic | 40.0% | |
GTGTGATTGTTGTCATTCAG+GGG | + | chr4.2:51333730-51333749 | None:intergenic | 40.0% | |
GTTACGTAACGTCACAATCT+TGG | + | chr4.2:51334031-51334050 | None:intergenic | 40.0% | |
TAATCCAGATATCAGCCACA+GGG | - | chr4.2:51335095-51335114 | MS.gene061284:intron | 40.0% | |
TATTGTGCCTTCTCAGGAAT+GGG | + | chr4.2:51335586-51335605 | None:intergenic | 40.0% | |
TCACGACCAACAAATTGATG+TGG | - | chr4.2:51331824-51331843 | MS.gene061284:intron | 40.0% | |
TCCCTGCAAACAACACAATA+GGG | + | chr4.2:51335051-51335070 | None:intergenic | 40.0% | |
TGAGGTTAGAGGAAATGGAA+TGG | - | chr4.2:51331685-51331704 | MS.gene061284:intron | 40.0% | |
TGCATGCATGTGTTCTACTA+GGG | + | chr4.2:51334093-51334112 | None:intergenic | 40.0% | |
TGCTTCCCAAAGTGAATATG+AGG | + | chr4.2:51336745-51336764 | None:intergenic | 40.0% | |
TGTAGGAGAGTAGCCAAAAA+AGG | - | chr4.2:51335859-51335878 | MS.gene061284:intron | 40.0% | |
TGTATTGGGATAGTGTCTCT+TGG | + | chr4.2:51332111-51332130 | None:intergenic | 40.0% | |
TGTGAACTCATCTATGTTCG+CGG | + | chr4.2:51332084-51332103 | None:intergenic | 40.0% | |
TGTGATTGTTGTCATTCAGG+GGG | + | chr4.2:51333729-51333748 | None:intergenic | 40.0% | |
TTTGCAGGGAGGAAATTCAA+AGG | - | chr4.2:51335061-51335080 | MS.gene061284:intron | 40.0% | |
! | ATCCAGTACCTTTTTGGACA+GGG | + | chr4.2:51332771-51332790 | None:intergenic | 40.0% |
! | CAATCTTGTTTGCTAGTTGC+AGG | - | chr4.2:51334721-51334740 | MS.gene061284:intron | 40.0% |
! | CTTATTTGGTTCCCTCTTTG+AGG | - | chr4.2:51331667-51331686 | MS.gene061284:CDS | 40.0% |
! | TCTATGTTCGCGGAGATTTT+AGG | + | chr4.2:51332074-51332093 | None:intergenic | 40.0% |
! | TGAGCTTAACTCAGTTGGTA+TGG | - | chr4.2:51333043-51333062 | MS.gene061284:intron | 40.0% |
! | TTCTATCACTGTCTTTTGGG+TGG | + | chr4.2:51335246-51335265 | None:intergenic | 40.0% |
!! | CTCTTTGAGGTTAGAGGAAA+TGG | - | chr4.2:51331680-51331699 | MS.gene061284:intron | 40.0% |
!! | GCTTTTAGGAGTTAGGACTT+AGG | - | chr4.2:51333405-51333424 | MS.gene061284:intron | 40.0% |
!! | TCCCTATTGTGTTGTTTGCA+GGG | - | chr4.2:51335047-51335066 | MS.gene061284:intron | 40.0% |
!! | TTCCCTATTGTGTTGTTTGC+AGG | - | chr4.2:51335046-51335065 | MS.gene061284:intron | 40.0% |
!!! | GTTTTTTTTTGTGGTGGCTG+GGG | + | chr4.2:51333103-51333122 | None:intergenic | 40.0% |
AAACATACCTGAGGGAGTTG+AGG | + | chr4.2:51331638-51331657 | None:intergenic | 45.0% | |
ACGTAACGTCACAATCTTGG+AGG | + | chr4.2:51334028-51334047 | None:intergenic | 45.0% | |
ATGAACCGGTTGTAAGCAGA+AGG | + | chr4.2:51334636-51334655 | None:intergenic | 45.0% | |
ATTGTGCCTTCTCAGGAATG+GGG | + | chr4.2:51335585-51335604 | None:intergenic | 45.0% | |
CAATGAATACGAATACGGGG+AGG | - | chr4.2:51336280-51336299 | MS.gene061284:intron | 45.0% | |
CAGCAAGCAAAGTTGGATCA+TGG | - | chr4.2:51336763-51336782 | MS.gene061284:intron | 45.0% | |
CATGTGTTCTACTAGGGCAT+AGG | + | chr4.2:51334087-51334106 | None:intergenic | 45.0% | |
CGCATCTGGATCTTGTTGAT+AGG | + | chr4.2:51336106-51336125 | None:intergenic | 45.0% | |
CGTAACGTCACAATCTTGGA+GGG | + | chr4.2:51334027-51334046 | None:intergenic | 45.0% | |
CTCCCTGCAAACAACACAAT+AGG | + | chr4.2:51335052-51335071 | None:intergenic | 45.0% | |
GAAGCAAGCAGCAAGGAAAT+TGG | - | chr4.2:51333517-51333536 | MS.gene061284:intron | 45.0% | |
GAAGTCACGGACAATGTCTT+AGG | + | chr4.2:51331987-51332006 | None:intergenic | 45.0% | |
GATTAGGGTCGAAAGCGATT+TGG | - | chr4.2:51336195-51336214 | MS.gene061284:intron | 45.0% | |
GCAAAGTTGGATCATGGTGA+AGG | - | chr4.2:51336769-51336788 | MS.gene061284:intron | 45.0% | |
GCAACTGCATGTATGGTAAG+TGG | + | chr4.2:51331881-51331900 | None:intergenic | 45.0% | |
GGAGGAAATGGCTGAAGTAA+TGG | + | chr4.2:51331614-51331633 | None:intergenic | 45.0% | |
GGGACTCGTGAAAAGACTAA+TGG | - | chr4.2:51336790-51336809 | MS.gene061284:CDS | 45.0% | |
GGTCTACTCCCTCTTTGTAT+TGG | + | chr4.2:51332126-51332145 | None:intergenic | 45.0% | |
GTAACGTCACAATCTTGGAG+GGG | + | chr4.2:51334026-51334045 | None:intergenic | 45.0% | |
GTAATCCAGATATCAGCCAC+AGG | - | chr4.2:51335094-51335113 | MS.gene061284:intron | 45.0% | |
GTGATTGTTGTCATTCAGGG+GGG | + | chr4.2:51333728-51333747 | None:intergenic | 45.0% | |
GTGGCTGATATCTGGATTAC+TGG | + | chr4.2:51335094-51335113 | None:intergenic | 45.0% | |
GTGTTCCTTCTGCTTACAAC+CGG | - | chr4.2:51334628-51334647 | MS.gene061284:intron | 45.0% | |
TAGTAGAGCACGAACATCCT+AGG | - | chr4.2:51333584-51333603 | MS.gene061284:intron | 45.0% | |
TCATGAAGAAGCAAGCAGCA+AGG | - | chr4.2:51333510-51333529 | MS.gene061284:intron | 45.0% | |
TCTATGGTCCCTGTCCAAAA+AGG | - | chr4.2:51332760-51332779 | MS.gene061284:intron | 45.0% | |
TGATAGGGCTGTCATCTCAA+TGG | + | chr4.2:51336090-51336109 | None:intergenic | 45.0% | |
TTAGGGTCGAAAGCGATTTG+GGG | - | chr4.2:51336197-51336216 | MS.gene061284:intron | 45.0% | |
TTTCTTCCTCTATCGGGTCT+TGG | - | chr4.2:51335696-51335715 | MS.gene061284:intron | 45.0% | |
! | ATTGCCATGGTGGTTTTCGA+GGG | - | chr4.2:51336042-51336061 | MS.gene061284:intron | 45.0% |
! | GATCCAGTACCTTTTTGGAC+AGG | + | chr4.2:51332772-51332791 | None:intergenic | 45.0% |
! | GGATCGATCCAGTACCTTTT+TGG | + | chr4.2:51332777-51332796 | None:intergenic | 45.0% |
!! | CTATTGTGTTGTTTGCAGGG+AGG | - | chr4.2:51335050-51335069 | MS.gene061284:intron | 45.0% |
!! | AAAAATAAAACAAATAAAAA+AGG | - | chr4.2:51331853-51331872 | MS.gene061284:intron | 5.0% |
!! | TATTAAAAAAACATAAATTA+GGG | + | chr4.2:51332521-51332540 | None:intergenic | 5.0% |
!! | TTTGAATATTAAATTTATAT+TGG | + | chr4.2:51334558-51334577 | None:intergenic | 5.0% |
AGAGTGTGACTCACGACGAA+TGG | + | chr4.2:51333617-51333636 | None:intergenic | 50.0% | |
ATGAGGGAGTGGCGCAATTA+AGG | - | chr4.2:51336341-51336360 | MS.gene061284:intron | 50.0% | |
CCAACTGAGTTAAGCTCACG+AGG | + | chr4.2:51333041-51333060 | None:intergenic | 50.0% | |
CCTCGTGAGCTTAACTCAGT+TGG | - | chr4.2:51333038-51333057 | MS.gene061284:intron | 50.0% | |
CTATGTCCAAGACCCGATAG+AGG | + | chr4.2:51335705-51335724 | None:intergenic | 50.0% | |
GAGTGTGACTCACGACGAAT+GGG | + | chr4.2:51333616-51333635 | None:intergenic | 50.0% | |
TGGGAAGCAGCAAGCAAAGT+TGG | - | chr4.2:51336756-51336775 | MS.gene061284:intron | 50.0% | |
! | CATTGCCATGGTGGTTTTCG+AGG | - | chr4.2:51336041-51336060 | MS.gene061284:intron | 50.0% |
! | GTCCCTGTCCAAAAAGGTAC+TGG | - | chr4.2:51332766-51332785 | MS.gene061284:intron | 50.0% |
!! | GGTTCCCTCTTTGAGGTTAG+AGG | - | chr4.2:51331674-51331693 | MS.gene061284:CDS | 50.0% |
!! | TTGCCATGGTGGTTTTCGAG+GGG | - | chr4.2:51336043-51336062 | MS.gene061284:intron | 50.0% |
AAACCCTAGCCGAGGGAATG+AGG | - | chr4.2:51336324-51336343 | MS.gene061284:intron | 55.0% | |
AACCCTAGCCGAGGGAATGA+GGG | - | chr4.2:51336325-51336344 | MS.gene061284:intron | 55.0% | |
AGATCCAGATGCGGCGAATG+TGG | - | chr4.2:51336113-51336132 | MS.gene061284:intron | 55.0% | |
ATTCCCTCGGCTAGGGTTTG+AGG | + | chr4.2:51336323-51336342 | None:intergenic | 55.0% | |
CATACCTGAGGGAGTTGAGG+AGG | + | chr4.2:51331635-51331654 | None:intergenic | 55.0% | |
CGACGAATGGGAGGAATCCT+AGG | + | chr4.2:51333604-51333623 | None:intergenic | 55.0% | |
GGCATTCCCCATTCCTGAGA+AGG | - | chr4.2:51335576-51335595 | MS.gene061284:intron | 55.0% | |
GGCTAGGGTTTGAGGGAGAA+TGG | + | chr4.2:51336315-51336334 | None:intergenic | 55.0% | |
GGGAGTTGAGGAGGAGGAAA+TGG | + | chr4.2:51331626-51331645 | None:intergenic | 55.0% | |
TCCAGATATCAGCCACAGGG+AGG | - | chr4.2:51335098-51335117 | MS.gene061284:intron | 55.0% | |
TGTGACTCACGACGAATGGG+AGG | + | chr4.2:51333613-51333632 | None:intergenic | 55.0% | |
TTCCCTCGGCTAGGGTTTGA+GGG | + | chr4.2:51336322-51336341 | None:intergenic | 55.0% | |
!! | GGCGAATGTGGCGGATGAAT+CGG | - | chr4.2:51336125-51336144 | MS.gene061284:intron | 55.0% |
!! | TGCCATGGTGGTTTTCGAGG+GGG | - | chr4.2:51336044-51336063 | MS.gene061284:intron | 55.0% |
ACCCCCCTCGAAAACCACCA+TGG | + | chr4.2:51336049-51336068 | None:intergenic | 60.0% | |
ACCTGAGGGAGTTGAGGAGG+AGG | + | chr4.2:51331632-51331651 | None:intergenic | 60.0% | |
ACTCCCTCATTCCCTCGGCT+AGG | + | chr4.2:51336331-51336350 | None:intergenic | 60.0% | |
CAGGGAGGCTTTCAGCTCAG+CGG | - | chr4.2:51335113-51335132 | MS.gene061284:intron | 60.0% | |
CGTCACAATCTTGGAGGGGC+CGG | + | chr4.2:51334022-51334041 | None:intergenic | 60.0% | |
CTCCCTCAAACCCTAGCCGA+GGG | - | chr4.2:51336317-51336336 | MS.gene061284:intron | 60.0% | |
CTCCCTCATTCCCTCGGCTA+GGG | + | chr4.2:51336330-51336349 | None:intergenic | 60.0% | |
CTGAGCTGAAAGCCTCCCTG+TGG | + | chr4.2:51335113-51335132 | None:intergenic | 60.0% | |
GCCTCCCTGTGGCTGATATC+TGG | + | chr4.2:51335102-51335121 | None:intergenic | 60.0% | |
GTCACAATCTTGGAGGGGCC+GGG | + | chr4.2:51334021-51334040 | None:intergenic | 60.0% | |
TAGCCGAGGGAATGAGGGAG+TGG | - | chr4.2:51336330-51336349 | MS.gene061284:intron | 60.0% | |
TCCAGATGCGGCGAATGTGG+CGG | - | chr4.2:51336116-51336135 | MS.gene061284:intron | 60.0% | |
TCCTCCTCCTCAACTCCCTC+AGG | - | chr4.2:51331628-51331647 | MS.gene061284:CDS | 60.0% | |
TCTCCCTCAAACCCTAGCCG+AGG | - | chr4.2:51336316-51336335 | MS.gene061284:intron | 60.0% | |
!! | GCCATGGTGGTTTTCGAGGG+GGG | - | chr4.2:51336045-51336064 | MS.gene061284:intron | 60.0% |
!!! | TGGTTTTCGAGGGGGGTGCT+CGG | - | chr4.2:51336052-51336071 | MS.gene061284:intron | 60.0% |
GCGCCACTCCCTCATTCCCT+CGG | + | chr4.2:51336336-51336355 | None:intergenic | 65.0% | |
TCCGCCACATTCGCCGCATC+TGG | + | chr4.2:51336120-51336139 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 51331602 | 51336822 | 51331602 | ID=MS.gene061284 |
chr4.2 | mRNA | 51331602 | 51336822 | 51331602 | ID=MS.gene061284.t1;Parent=MS.gene061284 |
chr4.2 | exon | 51336775 | 51336822 | 51336775 | ID=MS.gene061284.t1.exon1;Parent=MS.gene061284.t1 |
chr4.2 | CDS | 51336775 | 51336822 | 51336775 | ID=cds.MS.gene061284.t1;Parent=MS.gene061284.t1 |
chr4.2 | exon | 51334802 | 51334934 | 51334802 | ID=MS.gene061284.t1.exon2;Parent=MS.gene061284.t1 |
chr4.2 | CDS | 51334802 | 51334934 | 51334802 | ID=cds.MS.gene061284.t1;Parent=MS.gene061284.t1 |
chr4.2 | exon | 51333766 | 51333814 | 51333766 | ID=MS.gene061284.t1.exon3;Parent=MS.gene061284.t1 |
chr4.2 | CDS | 51333766 | 51333814 | 51333766 | ID=cds.MS.gene061284.t1;Parent=MS.gene061284.t1 |
chr4.2 | exon | 51333281 | 51333356 | 51333281 | ID=MS.gene061284.t1.exon4;Parent=MS.gene061284.t1 |
chr4.2 | CDS | 51333281 | 51333356 | 51333281 | ID=cds.MS.gene061284.t1;Parent=MS.gene061284.t1 |
chr4.2 | exon | 51331602 | 51331694 | 51331602 | ID=MS.gene061284.t1.exon5;Parent=MS.gene061284.t1 |
chr4.2 | CDS | 51331602 | 51331694 | 51331602 | ID=cds.MS.gene061284.t1;Parent=MS.gene061284.t1 |
Gene Sequence |
Protein sequence |