Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46516.t1 | XP_013448235.1 | 91 | 222 | 18 | 1 | 1 | 222 | 1 | 220 | 6.20E-108 | 400.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46516.t1 | Q9FV54 | 64.7 | 215 | 75 | 1 | 7 | 221 | 32 | 245 | 7.3e-73 | 275.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46516.t1 | A0A072TZF3 | 91.0 | 222 | 18 | 1 | 1 | 222 | 1 | 220 | 4.5e-108 | 400.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene46516 | 0.847482 | 1.12E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene46516 | 0.86896 | 4.43E-66 | -1.69E-46 |
| MS.gene049217 | MS.gene46516 | 0.84769 | 9.86E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene46516 | 0.855353 | 6.68E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene46516 | 0.876639 | 1.19E-68 | -1.69E-46 |
| MS.gene049320 | MS.gene46516 | 0.852638 | 4.05E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene46516 | 0.845685 | 3.48E-59 | -1.69E-46 |
| MS.gene049615 | MS.gene46516 | 0.825739 | 3.98E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene46516 | 0.84102 | 6.12E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene46516 | 0.841801 | 3.81E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene46516 | 0.824857 | 6.43E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene46516 | 0.843369 | 1.46E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene46516 | 0.818243 | 2.17E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene46516 | 0.83486 | 2.35E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene46516 | 0.848236 | 6.97E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene46516 | 0.850485 | 1.65E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene46516 | 0.822577 | 2.20E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene46516 | 0.837186 | 6.03E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene46516 | 0.832208 | 1.08E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene46516 | 0.825103 | 5.63E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene46516 | 0.80749 | 4.93E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene46516 | 0.852779 | 3.69E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene46516 | 0.8708 | 1.11E-66 | -1.69E-46 |
| MS.gene050772 | MS.gene46516 | 0.866456 | 2.81E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene46516 | 0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene46516 | 0.859748 | 3.34E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene46516 | 0.805512 | 1.29E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene46516 | 0.857545 | 1.52E-62 | -1.69E-46 |
| MS.gene051387 | MS.gene46516 | 0.854499 | 1.18E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene46516 | 0.830188 | 3.38E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene46516 | 0.860476 | 2.01E-63 | -1.69E-46 |
| MS.gene051694 | MS.gene46516 | 0.861204 | 1.21E-63 | -1.69E-46 |
| MS.gene051858 | MS.gene46516 | 0.83353 | 5.06E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene46516 | 0.808849 | 2.53E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene46516 | 0.816153 | 6.40E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene46516 | 0.818016 | 2.44E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene46516 | 0.833282 | 5.83E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene46516 | 0.827003 | 1.99E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene46516 | 0.816596 | 5.10E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene46516 | 0.839202 | 1.82E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene46516 | 0.801376 | 9.27E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene46516 | 0.815117 | 1.09E-51 | -1.69E-46 |
| MS.gene052605 | MS.gene46516 | 0.80968 | 1.68E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene46516 | 0.82197 | 3.04E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene46516 | 0.808921 | 2.44E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene46516 | 0.810693 | 1.02E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene46516 | 0.829192 | 5.90E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene46516 | 0.831183 | 1.93E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene46516 | 0.803515 | 3.36E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene46516 | 0.823205 | 1.57E-53 | -1.69E-46 |
| MS.gene053107 | MS.gene46516 | 0.830521 | 2.80E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene46516 | 0.831475 | 1.64E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene46516 | 0.82711 | 1.87E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene46516 | 0.875948 | 2.06E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene46516 | 0.871196 | 8.22E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene46516 | 0.852671 | 3.96E-61 | -1.69E-46 |
| MS.gene053436 | MS.gene46516 | 0.851303 | 9.69E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene46516 | 0.812613 | 3.88E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene46516 | 0.848305 | 6.67E-60 | -1.69E-46 |
| MS.gene053626 | MS.gene46516 | 0.835423 | 1.69E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene46516 | 0.850414 | 1.72E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene46516 | 0.819819 | 9.51E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene46516 | 0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene46516 | 0.84658 | 1.99E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene46516 | 0.841901 | 3.59E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene46516 | 0.845987 | 2.88E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene46516 | 0.863436 | 2.49E-64 | -1.69E-46 |
| MS.gene05470 | MS.gene46516 | 0.816422 | 5.58E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene46516 | 0.829281 | 5.62E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene46516 | 0.84292 | 1.93E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene46516 | 0.835627 | 1.50E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene46516 | 0.820391 | 7.03E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene46516 | 0.801044 | 1.08E-48 | -1.69E-46 |
| MS.gene055289 | MS.gene46516 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene46516 | 0.857954 | 1.15E-62 | -1.69E-46 |
| MS.gene055502 | MS.gene46516 | 0.860475 | 2.01E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene46516 | 0.841375 | 4.94E-58 | -1.69E-46 |
| MS.gene055647 | MS.gene46516 | 0.825554 | 4.40E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene46516 | 0.838452 | 2.85E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene46516 | 0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene46516 | 0.817604 | 3.03E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene46516 | 0.801455 | 8.93E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene46516 | 0.831209 | 1.90E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene46516 | 0.833726 | 4.52E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene46516 | 0.812689 | 3.74E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene46516 | 0.830515 | 2.81E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene46516 | 0.86639 | 2.95E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene46516 | 0.809058 | 2.28E-50 | -1.69E-46 |
| MS.gene056510 | MS.gene46516 | 0.831998 | 1.21E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene46516 | 0.847455 | 1.14E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene46516 | 0.852013 | 6.10E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene46516 | 0.840991 | 6.23E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene46516 | 0.836501 | 9.02E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene46516 | 0.837191 | 6.01E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene46516 | 0.830115 | 3.52E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene46516 | 0.835569 | 1.55E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene46516 | 0.889843 | 1.68E-73 | -1.69E-46 |
| MS.gene057658 | MS.gene46516 | 0.828435 | 9.01E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene46516 | 0.840627 | 7.76E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene46516 | 0.814085 | 1.84E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene46516 | 0.837562 | 4.83E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene46516 | 0.808159 | 3.55E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene46516 | 0.837181 | 6.05E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene46516 | 0.844361 | 7.93E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene46516 | 0.870687 | 1.21E-66 | -1.69E-46 |
| MS.gene058544 | MS.gene46516 | 0.867358 | 1.45E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene46516 | 0.853511 | 2.28E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene46516 | 0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene05883 | MS.gene46516 | 0.806744 | 7.09E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene46516 | 0.838524 | 2.73E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene46516 | 0.862129 | 6.31E-64 | -1.69E-46 |
| MS.gene05934 | MS.gene46516 | 0.834917 | 2.27E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene46516 | 0.825252 | 5.19E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene46516 | 0.851622 | 7.87E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene46516 | 0.863297 | 2.75E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene46516 | 0.836773 | 7.69E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene46516 | 0.824703 | 6.99E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene46516 | 0.831505 | 1.61E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene46516 | 0.844572 | 6.96E-59 | -1.69E-46 |
| MS.gene060193 | MS.gene46516 | 0.809198 | 2.13E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene46516 | 0.813587 | 2.37E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene46516 | 0.822551 | 2.23E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene46516 | 0.847062 | 1.47E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene46516 | 0.803707 | 3.07E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene46516 | 0.890008 | 1.45E-73 | -1.69E-46 |
| MS.gene061150 | MS.gene46516 | 0.882609 | 9.02E-71 | -1.69E-46 |
| MS.gene061171 | MS.gene46516 | 0.807394 | 5.16E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene46516 | 0.851099 | 1.11E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46516.t1 | MTR_7g035310 | 89.189 | 222 | 22 | 1 | 1 | 222 | 1 | 220 | 1.05e-141 | 395 |
| MS.gene46516.t1 | MTR_7g035310 | 89.189 | 222 | 22 | 1 | 1 | 222 | 1 | 220 | 1.62e-141 | 395 |
| MS.gene46516.t1 | MTR_4g011040 | 31.953 | 169 | 98 | 2 | 66 | 217 | 82 | 250 | 1.24e-23 | 95.5 |
| MS.gene46516.t1 | MTR_2g103430 | 28.708 | 209 | 131 | 3 | 27 | 218 | 33 | 240 | 6.90e-21 | 88.2 |
| MS.gene46516.t1 | MTR_2g103420 | 32.515 | 163 | 93 | 2 | 65 | 210 | 81 | 243 | 2.27e-19 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46516.t1 | AT5G14660 | 67.157 | 204 | 62 | 2 | 19 | 222 | 42 | 240 | 1.46e-94 | 278 |
| MS.gene46516.t1 | AT5G14660 | 67.157 | 204 | 62 | 2 | 19 | 222 | 42 | 240 | 1.46e-94 | 278 |
| MS.gene46516.t1 | AT5G14660 | 67.157 | 204 | 62 | 2 | 19 | 222 | 42 | 240 | 1.46e-94 | 278 |
| MS.gene46516.t1 | AT1G15390 | 33.918 | 171 | 96 | 3 | 64 | 217 | 82 | 252 | 3.13e-24 | 97.4 |
Find 47 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAATTAATGTTCAACTTA+TGG | 0.242265 | 7.1:+59940741 | MS.gene46516:CDS |
| TAGTATTCGTGGACAGTTAC+AGG | 0.295514 | 7.1:+59942900 | MS.gene46516:CDS |
| GCATCAATCTTCACAGATTC+TGG | 0.306156 | 7.1:-59941562 | None:intergenic |
| TTGTACAGAACTGATGGTAT+TGG | 0.415936 | 7.1:+59940700 | MS.gene46516:intron |
| GGCTGGAGGAGGAGAGAGTC+AGG | 0.424664 | 7.1:-59938309 | None:intergenic |
| GTCAGGTGGAAGAAGCGGTT+TGG | 0.434099 | 7.1:-59938292 | None:intergenic |
| TTGAACATTAATTCCTACTT+GGG | 0.445401 | 7.1:-59940734 | None:intergenic |
| AACCCTCATTGAAGAGTGTT+CGG | 0.455481 | 7.1:-59940843 | None:intergenic |
| AAAAGCGGACTTGGTGCGGC+TGG | 0.456550 | 7.1:-59938326 | None:intergenic |
| GTTGAACATTAATTCCTACT+TGG | 0.459640 | 7.1:-59940735 | None:intergenic |
| ATTGAGTATTTACTAACTCT+AGG | 0.463945 | 7.1:-59940817 | None:intergenic |
| CAAGTGCAGAACAGCGGTGG+TGG | 0.467569 | 7.1:-59938261 | None:intergenic |
| AATATCCAGACCCCAAGTTA+AGG | 0.468504 | 7.1:+59938506 | MS.gene46516:CDS |
| GGACTTGGTGCGGCTGGAGG+AGG | 0.469407 | 7.1:-59938320 | None:intergenic |
| CCTTCACCACGTTCGCCTAC+CGG | 0.476721 | 7.1:-59940772 | None:intergenic |
| CAGTCATTCTCTCAAAGAAA+AGG | 0.478584 | 7.1:-59942864 | None:intergenic |
| GAAGTTCTTGATAGTATTCG+TGG | 0.485870 | 7.1:+59942889 | MS.gene46516:CDS |
| CGGCATTAATGCTGACGTAA+AGG | 0.490802 | 7.1:+59940879 | MS.gene46516:CDS |
| TCATGTTGAAATATCCGTGC+TGG | 0.495228 | 7.1:-59941631 | None:intergenic |
| TTGAGTATTTACTAACTCTA+GGG | 0.500021 | 7.1:-59940816 | None:intergenic |
| TTTACGTCAGCATTAATGCC+GGG | 0.511687 | 7.1:-59940877 | None:intergenic |
| ACATGAATTTGACCATCTAC+AGG | 0.526666 | 7.1:+59941648 | MS.gene46516:CDS |
| TTTCTTAAGATTATCATCAA+AGG | 0.537118 | 7.1:-59938551 | None:intergenic |
| CTTTACGTCAGCATTAATGC+CGG | 0.542608 | 7.1:-59940878 | None:intergenic |
| AGCGGACTTGGTGCGGCTGG+AGG | 0.547910 | 7.1:-59938323 | None:intergenic |
| CCGGTAGGCGAACGTGGTGA+AGG | 0.552415 | 7.1:+59940772 | MS.gene46516:CDS |
| CAGAACAGCGGTGGTGGTGT+TGG | 0.560731 | 7.1:-59938255 | None:intergenic |
| GAGGGTTGTCTATCTTTCCC+CGG | 0.565473 | 7.1:+59940859 | MS.gene46516:CDS |
| TTCAATCCGGTAGGCGAACG+TGG | 0.572000 | 7.1:+59940766 | MS.gene46516:CDS |
| GTGGAAGAAGCGGTTTGGAA+TGG | 0.573783 | 7.1:-59938287 | None:intergenic |
| AGAGAGTCAGGTGGAAGAAG+CGG | 0.574880 | 7.1:-59938297 | None:intergenic |
| TAATGATGAAGAAGATGACT+TGG | 0.576162 | 7.1:-59938232 | None:intergenic |
| GATTGATGCACGTGATGTCA+AGG | 0.593167 | 7.1:+59941576 | MS.gene46516:CDS |
| GGTCTTTCAGCACCCCAAGT+AGG | 0.597078 | 7.1:+59940721 | MS.gene46516:CDS |
| CACGTGATGTCAAGGGAACA+CGG | 0.600242 | 7.1:+59941584 | MS.gene46516:CDS |
| GTTTGTCTGGCCTTCCAGCA+CGG | 0.600965 | 7.1:+59941617 | MS.gene46516:CDS |
| CAGCAAGTGCAGAACAGCGG+TGG | 0.606678 | 7.1:-59938264 | None:intergenic |
| GTTGAAATATCCGTGCTGGA+AGG | 0.611276 | 7.1:-59941627 | None:intergenic |
| TGAACATTAATTCCTACTTG+GGG | 0.618628 | 7.1:-59940733 | None:intergenic |
| AATGATGAAGAAGATGACTT+GGG | 0.622365 | 7.1:-59938231 | None:intergenic |
| AACCGAACACTCTTCAATGA+GGG | 0.628227 | 7.1:+59940841 | MS.gene46516:CDS |
| ATTGATGCACGTGATGTCAA+GGG | 0.634587 | 7.1:+59941577 | MS.gene46516:CDS |
| GATGAAGAAGATGACTTGGG+AGG | 0.636397 | 7.1:-59938228 | None:intergenic |
| GAACCGAACACTCTTCAATG+AGG | 0.639867 | 7.1:+59940840 | MS.gene46516:CDS |
| TTACGTCAGCATTAATGCCG+GGG | 0.640683 | 7.1:-59940876 | None:intergenic |
| TGGCAGCAAGTGCAGAACAG+CGG | 0.685500 | 7.1:-59938267 | None:intergenic |
| TGGAGGAGGAGAGAGTCAGG+TGG | 0.687629 | 7.1:-59938306 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAAAATAAATCAAAA+AGG | - | chr7.1:59941309-59941328 | None:intergenic | 10.0% |
| !! | TACATAAACAAAAAAAATTT+CGG | - | chr7.1:59941392-59941411 | None:intergenic | 10.0% |
| !!! | ATTTTTCTTATTAAGATTAA+AGG | - | chr7.1:59939254-59939273 | None:intergenic | 10.0% |
| !!! | TTCTAATTTTGTATTAATTA+GGG | - | chr7.1:59942710-59942729 | None:intergenic | 10.0% |
| !!! | TTTTTCTTATTAAGATTAAA+GGG | - | chr7.1:59939253-59939272 | None:intergenic | 10.0% |
| !! | AAAATTGCAAATATAATAGA+TGG | - | chr7.1:59941009-59941028 | None:intergenic | 15.0% |
| !! | AAATATTTAATGAACCTAAA+AGG | - | chr7.1:59941200-59941219 | None:intergenic | 15.0% |
| !! | AAATTGCAAATATAATAGAT+GGG | - | chr7.1:59941008-59941027 | None:intergenic | 15.0% |
| !! | ATATAATTGTTATATCTACA+GGG | + | chr7.1:59942838-59942857 | MS.gene46516:intron | 15.0% |
| !! | GTCAAAATAAATTGTTAATA+AGG | - | chr7.1:59939672-59939691 | None:intergenic | 15.0% |
| !! | TATATAATTGTTATATCTAC+AGG | + | chr7.1:59942837-59942856 | MS.gene46516:intron | 15.0% |
| !! | TTGAGTTATTTATAAACTTA+TGG | + | chr7.1:59942378-59942397 | MS.gene46516:intron | 15.0% |
| !!! | ATGTTTTTATAAAACAAGAT+TGG | + | chr7.1:59939858-59939877 | MS.gene46516:intron | 15.0% |
| !!! | GTTCTAATTTTGTATTAATT+AGG | - | chr7.1:59942711-59942730 | None:intergenic | 15.0% |
| !!! | TACTTTTACTATTAGAATAA+GGG | - | chr7.1:59939824-59939843 | None:intergenic | 15.0% |
| !!! | TTTTCTTATTAAGATTAAAG+GGG | - | chr7.1:59939252-59939271 | None:intergenic | 15.0% |
| !! | AAAACAATAGAGAAACAAAA+AGG | + | chr7.1:59940392-59940411 | MS.gene46516:intron | 20.0% |
| !! | AAATGTTGTAAAACAATAGA+AGG | - | chr7.1:59940590-59940609 | None:intergenic | 20.0% |
| !! | AACAGTCTTAATTATATGAA+AGG | - | chr7.1:59942773-59942792 | None:intergenic | 20.0% |
| !! | ATCTATAAGTGATCTTAATA+TGG | - | chr7.1:59942733-59942752 | None:intergenic | 20.0% |
| !! | ATTAAGAAGAGAAAAAGATA+AGG | - | chr7.1:59940367-59940386 | None:intergenic | 20.0% |
| !! | ATTCAAACCTATAAATAGAA+AGG | + | chr7.1:59941844-59941863 | MS.gene46516:intron | 20.0% |
| !! | TATGATTTAAGCATTCAATT+AGG | + | chr7.1:59939611-59939630 | MS.gene46516:intron | 20.0% |
| !! | TTATAACTTCATTTCATCTT+TGG | - | chr7.1:59938636-59938655 | None:intergenic | 20.0% |
| !! | TTCATACTAAGTTCAAAAAT+TGG | - | chr7.1:59940979-59940998 | None:intergenic | 20.0% |
| !! | TTTCTTAAGATTATCATCAA+AGG | - | chr7.1:59938554-59938573 | None:intergenic | 20.0% |
| !!! | AAAGAAAGTGTTTAAAAACA+CGG | - | chr7.1:59942054-59942073 | None:intergenic | 20.0% |
| !!! | AATAAGTTGAAAATAGCTTA+TGG | + | chr7.1:59938679-59938698 | MS.gene46516:intron | 20.0% |
| !!! | AGTTTAATGTTTTGATTTAG+AGG | + | chr7.1:59942430-59942449 | MS.gene46516:intron | 20.0% |
| !!! | ATTTTGAATCTAGCTTTTTT+TGG | + | chr7.1:59940935-59940954 | MS.gene46516:intron | 20.0% |
| !!! | ATTTTTGAACTTAGTATGAA+TGG | + | chr7.1:59940979-59940998 | MS.gene46516:intron | 20.0% |
| !!! | ATTTTTTAAAGTTGTTGAGA+TGG | + | chr7.1:59939710-59939729 | MS.gene46516:intron | 20.0% |
| !!! | CGTGTTTTATTTTCTTTTAT+TGG | + | chr7.1:59941415-59941434 | MS.gene46516:intron | 20.0% |
| !!! | GAGCTAATTTTAAAATCATA+GGG | - | chr7.1:59939775-59939794 | None:intergenic | 20.0% |
| !!! | GTACTTTTACTATTAGAATA+AGG | - | chr7.1:59939825-59939844 | None:intergenic | 20.0% |
| !!! | TAATTTCTTGTTATAGTTCT+TGG | + | chr7.1:59940033-59940052 | MS.gene46516:intron | 20.0% |
| !!! | TCAACTTTTTTCTGTTATAT+TGG | - | chr7.1:59940241-59940260 | None:intergenic | 20.0% |
| !!! | TGAGCTAATTTTAAAATCAT+AGG | - | chr7.1:59939776-59939795 | None:intergenic | 20.0% |
| !!! | TTATTCTTTTTCCTTAACTT+GGG | - | chr7.1:59938520-59938539 | None:intergenic | 20.0% |
| !!! | TTCTATTGTTTTACAACATT+TGG | + | chr7.1:59940589-59940608 | MS.gene46516:intron | 20.0% |
| !!! | TTGTTTTTTTTGAATGAAGT+TGG | + | chr7.1:59938448-59938467 | MS.gene46516:intron | 20.0% |
| !!! | TTTATAAACTTATGGATTGA+TGG | + | chr7.1:59942386-59942405 | MS.gene46516:intron | 20.0% |
| !!! | TTTATTCTTTTTCCTTAACT+TGG | - | chr7.1:59938521-59938540 | None:intergenic | 20.0% |
| !!! | TTTTGAATCTAGCTTTTTTT+GGG | + | chr7.1:59940936-59940955 | MS.gene46516:intron | 20.0% |
| !!! | TTTTTTAAAGTTGTTGAGAT+GGG | + | chr7.1:59939711-59939730 | MS.gene46516:intron | 20.0% |
| ! | AAGATAGTTGTAAGACTATT+TGG | - | chr7.1:59938735-59938754 | None:intergenic | 25.0% |
| ! | AAGATTAAAGGGGTAAAATT+TGG | - | chr7.1:59939242-59939261 | None:intergenic | 25.0% |
| ! | AAGGAACTCAAATAAATTAC+AGG | - | chr7.1:59941223-59941242 | None:intergenic | 25.0% |
| ! | AAGTCATAGATAGATACTTA+TGG | - | chr7.1:59938398-59938417 | None:intergenic | 25.0% |
| ! | ACTTAACAATTCTTTCAGAA+AGG | - | chr7.1:59941242-59941261 | None:intergenic | 25.0% |
| ! | AGAAGAGGATAACAAAATAA+GGG | - | chr7.1:59941056-59941075 | None:intergenic | 25.0% |
| ! | AGGAATTAATGTTCAACTTA+TGG | + | chr7.1:59940741-59940760 | MS.gene46516:CDS | 25.0% |
| ! | AGTCTTACAACTATCTTATA+AGG | + | chr7.1:59938738-59938757 | MS.gene46516:intron | 25.0% |
| ! | ATAGCTTATGGATATTTCAT+AGG | + | chr7.1:59938691-59938710 | MS.gene46516:intron | 25.0% |
| ! | ATTGAGTATTTACTAACTCT+AGG | - | chr7.1:59940820-59940839 | None:intergenic | 25.0% |
| ! | ATTTAATGAACCTAAAAGGA+TGG | - | chr7.1:59941196-59941215 | None:intergenic | 25.0% |
| ! | CATATAACAAGTGTTATGAT+AGG | + | chr7.1:59941785-59941804 | MS.gene46516:intron | 25.0% |
| ! | CATGATTCAAATAACATTGA+GGG | + | chr7.1:59940544-59940563 | MS.gene46516:intron | 25.0% |
| ! | CTATAAATAGAAAGGATCTA+GGG | + | chr7.1:59941852-59941871 | MS.gene46516:intron | 25.0% |
| ! | GTCTTACAACTATCTTATAA+GGG | + | chr7.1:59938739-59938758 | MS.gene46516:intron | 25.0% |
| ! | GTTATAGTTCTTGGATATTA+GGG | + | chr7.1:59940042-59940061 | MS.gene46516:intron | 25.0% |
| ! | TATAAATAGAAAGGATCTAG+GGG | + | chr7.1:59941853-59941872 | MS.gene46516:intron | 25.0% |
| ! | TATATATAACCAACAAGTAG+TGG | - | chr7.1:59942800-59942819 | None:intergenic | 25.0% |
| ! | TGACAATTACCAAACAAATA+GGG | - | chr7.1:59939126-59939145 | None:intergenic | 25.0% |
| ! | TGACTAGGAAATATTTGTTT+GGG | + | chr7.1:59938816-59938835 | MS.gene46516:intron | 25.0% |
| ! | TGTTATAGTTCTTGGATATT+AGG | + | chr7.1:59940041-59940060 | MS.gene46516:intron | 25.0% |
| ! | TTGAACATTAATTCCTACTT+GGG | - | chr7.1:59940737-59940756 | None:intergenic | 25.0% |
| ! | TTGACTAGGAAATATTTGTT+TGG | + | chr7.1:59938815-59938834 | MS.gene46516:intron | 25.0% |
| ! | TTGAGTATTTACTAACTCTA+GGG | - | chr7.1:59940819-59940838 | None:intergenic | 25.0% |
| ! | TTGTAATTTATCTGCATTCA+GGG | + | chr7.1:59939052-59939071 | MS.gene46516:intron | 25.0% |
| ! | TTTGAATGTTACATTAACAG+TGG | + | chr7.1:59940668-59940687 | MS.gene46516:intron | 25.0% |
| ! | TTTGTAATTTATCTGCATTC+AGG | + | chr7.1:59939051-59939070 | MS.gene46516:intron | 25.0% |
| !! | ACAAGCAATTTTTCTTTAGT+TGG | - | chr7.1:59941456-59941475 | None:intergenic | 25.0% |
| !! | ATAATAAGACTTGTTTGAGT+AGG | - | chr7.1:59941529-59941548 | None:intergenic | 25.0% |
| !! | ATTTTTAATCATGTAAGCCA+GGG | + | chr7.1:59940503-59940522 | MS.gene46516:intron | 25.0% |
| !! | CAAGCAATTTTTCTTTAGTT+GGG | - | chr7.1:59941455-59941474 | None:intergenic | 25.0% |
| !! | TAATAAGACTTGTTTGAGTA+GGG | - | chr7.1:59941528-59941547 | None:intergenic | 25.0% |
| !! | TTTCTGAAAGAATTGTTAAG+TGG | + | chr7.1:59941241-59941260 | MS.gene46516:intron | 25.0% |
| !!! | ATATCAGTGTTCTGAAAAAA+TGG | - | chr7.1:59940310-59940329 | None:intergenic | 25.0% |
| !!! | ATGGTATTTTTATGAACCTT+TGG | + | chr7.1:59941751-59941770 | MS.gene46516:intron | 25.0% |
| !!! | CTATTTCTACCAACAAAATA+GGG | - | chr7.1:59940076-59940095 | None:intergenic | 25.0% |
| !!! | GCTACAAGCTTTTTTTTTTA+TGG | + | chr7.1:59938656-59938675 | MS.gene46516:intron | 25.0% |
| !!! | TAAGTTATTTTTACACGACA+CGG | - | chr7.1:59942357-59942376 | None:intergenic | 25.0% |
| !!! | TATTCTTTTTCCTTAACTTG+GGG | - | chr7.1:59938519-59938538 | None:intergenic | 25.0% |
| !!! | TATTTTTAATCATGTAAGCC+AGG | + | chr7.1:59940502-59940521 | MS.gene46516:intron | 25.0% |
| !!! | TCAAACAAGTCTTATTATTG+CGG | + | chr7.1:59941531-59941550 | MS.gene46516:intron | 25.0% |
| !!! | TTATCTACAGAAAAGTACTT+AGG | - | chr7.1:59939433-59939452 | None:intergenic | 25.0% |
| AATAGCATATGAGCTTATAG+AGG | - | chr7.1:59939369-59939388 | None:intergenic | 30.0% | |
| AATGATGAAGAAGATGACTT+GGG | - | chr7.1:59938234-59938253 | None:intergenic | 30.0% | |
| ACTTCATTTCATCTTTGGAT+TGG | - | chr7.1:59938631-59938650 | None:intergenic | 30.0% | |
| AGATAGCAAACAGAACAAAA+TGG | - | chr7.1:59941366-59941385 | None:intergenic | 30.0% | |
| AGGAAAAAGAATAAACGCAT+TGG | + | chr7.1:59938526-59938545 | MS.gene46516:CDS | 30.0% | |
| CAGAAGAGGATAACAAAATA+AGG | - | chr7.1:59941057-59941076 | None:intergenic | 30.0% | |
| CATAAGCTATAAGCTCAAAA+AGG | - | chr7.1:59938781-59938800 | None:intergenic | 30.0% | |
| CATGAATGAAACCAGAAAAA+TGG | + | chr7.1:59941133-59941152 | MS.gene46516:intron | 30.0% | |
| CCTAGATCCTTTCTATTTAT+AGG | - | chr7.1:59941854-59941873 | None:intergenic | 30.0% | |
| CCTATAAATAGAAAGGATCT+AGG | + | chr7.1:59941851-59941870 | MS.gene46516:intron | 30.0% | |
| CTGATCGAATTTGTAATGTT+TGG | - | chr7.1:59939330-59939349 | None:intergenic | 30.0% | |
| GACTAGGAAATATTTGTTTG+GGG | + | chr7.1:59938817-59938836 | MS.gene46516:intron | 30.0% | |
| GCATGATTCAAATAACATTG+AGG | + | chr7.1:59940543-59940562 | MS.gene46516:intron | 30.0% | |
| GCTAGTGAATAGTATTAACA+GGG | + | chr7.1:59942677-59942696 | MS.gene46516:intron | 30.0% | |
| GGATGGTTATGCTATATATT+TGG | - | chr7.1:59941179-59941198 | None:intergenic | 30.0% | |
| GTAACATTCAAAAAAACGCA+GGG | - | chr7.1:59940660-59940679 | None:intergenic | 30.0% | |
| GTGACAATTACCAAACAAAT+AGG | - | chr7.1:59939127-59939146 | None:intergenic | 30.0% | |
| GTTCAAAAGTTGTCACAAAA+TGG | + | chr7.1:59940459-59940478 | MS.gene46516:intron | 30.0% | |
| GTTGAACATTAATTCCTACT+TGG | - | chr7.1:59940738-59940757 | None:intergenic | 30.0% | |
| TAATGATGAAGAAGATGACT+TGG | - | chr7.1:59938235-59938254 | None:intergenic | 30.0% | |
| TCAAAAAACTTACCTGTAGA+TGG | - | chr7.1:59941663-59941682 | None:intergenic | 30.0% | |
| TCTAATAAGCTCATTTGACT+AGG | + | chr7.1:59938801-59938820 | MS.gene46516:intron | 30.0% | |
| TGAACATTAATTCCTACTTG+GGG | - | chr7.1:59940736-59940755 | None:intergenic | 30.0% | |
| TGTAACATTCAAAAAAACGC+AGG | - | chr7.1:59940661-59940680 | None:intergenic | 30.0% | |
| TTCTATAAAACCAGAAACTG+AGG | - | chr7.1:59942295-59942314 | None:intergenic | 30.0% | |
| ! | AACCATTTTGTGACAACTTT+TGG | + | chr7.1:59940336-59940355 | MS.gene46516:intron | 30.0% |
| ! | ACCATTTTGTGACAACTTTT+GGG | + | chr7.1:59940337-59940356 | MS.gene46516:intron | 30.0% |
| ! | CGTTTGAAGTTTGAAAATCT+TGG | + | chr7.1:59941029-59941048 | MS.gene46516:intron | 30.0% |
| ! | GGATATTTCACTATTTTCAG+CGG | - | chr7.1:59938493-59938512 | None:intergenic | 30.0% |
| ! | TATAGCATAACCATCCTTTT+AGG | + | chr7.1:59941183-59941202 | MS.gene46516:intron | 30.0% |
| ! | TATTAGAATAAGGGTGTACT+CGG | - | chr7.1:59939815-59939834 | None:intergenic | 30.0% |
| ! | TCAACTTATGGTTTTCAATC+CGG | + | chr7.1:59940753-59940772 | MS.gene46516:CDS | 30.0% |
| ! | TCTAAAGTTCATGACTATAC+TGG | + | chr7.1:59941476-59941495 | MS.gene46516:intron | 30.0% |
| ! | TTTATGATAGTGAAAGACAG+AGG | - | chr7.1:59939580-59939599 | None:intergenic | 30.0% |
| ! | TTTGTTGGTAGAAATAGCTA+GGG | + | chr7.1:59940079-59940098 | MS.gene46516:intron | 30.0% |
| !! | AGAAGTACAATTTTTCCCTT+TGG | + | chr7.1:59942487-59942506 | MS.gene46516:intron | 30.0% |
| !! | GCTATTTCTACCAACAAAAT+AGG | - | chr7.1:59940077-59940096 | None:intergenic | 30.0% |
| !! | TTTTGTTGGTAGAAATAGCT+AGG | + | chr7.1:59940078-59940097 | MS.gene46516:intron | 30.0% |
| !!! | CATTTTTCTGGTTTCATTCA+TGG | - | chr7.1:59941135-59941154 | None:intergenic | 30.0% |
| !!! | GCTTTTTTTGGGCTAATTTA+TGG | + | chr7.1:59940947-59940966 | MS.gene46516:intron | 30.0% |
| AAACAAACAAAGGCAGACTA+AGG | - | chr7.1:59939482-59939501 | None:intergenic | 35.0% | |
| AACAAACAAAGGCAGACTAA+GGG | - | chr7.1:59939481-59939500 | None:intergenic | 35.0% | |
| ACATGAATTTGACCATCTAC+AGG | + | chr7.1:59941648-59941667 | MS.gene46516:CDS | 35.0% | |
| ACCATCAGTTCTGTACAAAA+AGG | - | chr7.1:59940698-59940717 | None:intergenic | 35.0% | |
| AGAGAATAAGAACACAACGT+GGG | + | chr7.1:59940420-59940439 | MS.gene46516:intron | 35.0% | |
| AGAGAGTGAGAGAAAACTTA+GGG | - | chr7.1:59942117-59942136 | None:intergenic | 35.0% | |
| AGGGCCACATGAAAAAAAAA+AGG | - | chr7.1:59942267-59942286 | None:intergenic | 35.0% | |
| AGTTCTTGGATATTAGGGAA+TGG | + | chr7.1:59940047-59940066 | MS.gene46516:intron | 35.0% | |
| ATAGATACTTATGGTGAGAG+TGG | - | chr7.1:59938389-59938408 | None:intergenic | 35.0% | |
| ATTAATTCCCCTTTCACCAT+TGG | - | chr7.1:59941814-59941833 | None:intergenic | 35.0% | |
| CACATGAAAAAAAAAAGGGC+AGG | - | chr7.1:59942262-59942281 | None:intergenic | 35.0% | |
| CAGTCATTCTCTCAAAGAAA+AGG | - | chr7.1:59942867-59942886 | None:intergenic | 35.0% | |
| CTATCTTATAAGGGTCTGTT+TGG | + | chr7.1:59938748-59938767 | MS.gene46516:intron | 35.0% | |
| CTGCACGATAAGAAATTTGA+AGG | + | chr7.1:59939539-59939558 | MS.gene46516:intron | 35.0% | |
| GAAACCAGAAAAATGGAACT+TGG | + | chr7.1:59941140-59941159 | MS.gene46516:intron | 35.0% | |
| GACTAATCTCCCTATTTGTT+TGG | + | chr7.1:59939114-59939133 | MS.gene46516:intron | 35.0% | |
| GGCTAGTGAATAGTATTAAC+AGG | + | chr7.1:59942676-59942695 | MS.gene46516:intron | 35.0% | |
| GGGCCACATGAAAAAAAAAA+GGG | - | chr7.1:59942266-59942285 | None:intergenic | 35.0% | |
| GTTCATGACTATACTGGATA+TGG | + | chr7.1:59941482-59941501 | MS.gene46516:intron | 35.0% | |
| TACTCCGTTGAAACAAACAA+AGG | - | chr7.1:59939492-59939511 | None:intergenic | 35.0% | |
| TATTGATATTTCCATCACCC+TGG | - | chr7.1:59940523-59940542 | None:intergenic | 35.0% | |
| TCAAACTCGAGATTCTACTA+TGG | - | chr7.1:59942572-59942591 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | + | chr7.1:59938976-59938995 | MS.gene46516:intron | 35.0% | |
| TCCCAAAAGTTGTCACAAAA+TGG | - | chr7.1:59940341-59940360 | None:intergenic | 35.0% | |
| TGATACTCAGTAAACTTGTC+AGG | + | chr7.1:59941890-59941909 | MS.gene46516:intron | 35.0% | |
| TGTAAGACCAGTAAATCACA+AGG | - | chr7.1:59940191-59940210 | None:intergenic | 35.0% | |
| TTAATTCCCCTTTCACCATT+GGG | - | chr7.1:59941813-59941832 | None:intergenic | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | - | chr7.1:59938890-59938909 | None:intergenic | 35.0% | |
| TTGCTAGAAAGAAAAAACCG+TGG | - | chr7.1:59941102-59941121 | None:intergenic | 35.0% | |
| TTGTACAGAACTGATGGTAT+TGG | + | chr7.1:59940700-59940719 | MS.gene46516:intron | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | - | chr7.1:59938891-59938910 | None:intergenic | 35.0% | |
| ! | ATGAAAGGTGTAGATGTTTG+TGG | - | chr7.1:59942758-59942777 | None:intergenic | 35.0% |
| ! | GAAGTTCTTGATAGTATTCG+TGG | + | chr7.1:59942889-59942908 | MS.gene46516:CDS | 35.0% |
| ! | GTACAATTTTTCCCTTTGGT+AGG | + | chr7.1:59942491-59942510 | MS.gene46516:intron | 35.0% |
| ! | GTTTTGTGAAGCTGAAAAAG+CGG | - | chr7.1:59938344-59938363 | None:intergenic | 35.0% |
| ! | TAATACTATTCACTAGCCTC+TGG | - | chr7.1:59942674-59942693 | None:intergenic | 35.0% |
| ! | TCCTTTTTGTACAGAACTGA+TGG | + | chr7.1:59940694-59940713 | MS.gene46516:intron | 35.0% |
| ! | TCTGCCTTTGTTTGTTTCAA+CGG | + | chr7.1:59939485-59939504 | MS.gene46516:intron | 35.0% |
| ! | TGAAAGGTGTAGATGTTTGT+GGG | - | chr7.1:59942757-59942776 | None:intergenic | 35.0% |
| ! | TGAAGTGGGTCATATTTTGT+GGG | + | chr7.1:59942020-59942039 | MS.gene46516:intron | 35.0% |
| ! | TTGTTGGTAGAAATAGCTAG+GGG | + | chr7.1:59940080-59940099 | MS.gene46516:intron | 35.0% |
| !! | GCTATATATTTGGTTCTTGC+TGG | - | chr7.1:59941169-59941188 | None:intergenic | 35.0% |
| !!! | CTGCCCTTTTTTTTTTCATG+TGG | + | chr7.1:59942260-59942279 | MS.gene46516:intron | 35.0% |
| AAATATGACCCACTTCAGCA+AGG | - | chr7.1:59942017-59942036 | None:intergenic | 40.0% | |
| AACCAGAAACTGAGGAAGTA+AGG | - | chr7.1:59942287-59942306 | None:intergenic | 40.0% | |
| AACCGAACACTCTTCAATGA+GGG | + | chr7.1:59940841-59940860 | MS.gene46516:CDS | 40.0% | |
| AAGGTGAACCGACAAACTTT+GGG | - | chr7.1:59940172-59940191 | None:intergenic | 40.0% | |
| AATAGAAAGGATCTAGGGGT+CGG | + | chr7.1:59941857-59941876 | MS.gene46516:intron | 40.0% | |
| AATATCCAGACCCCAAGTTA+AGG | + | chr7.1:59938506-59938525 | MS.gene46516:CDS | 40.0% | |
| AATCAACAAACCAATCCCAG+AGG | + | chr7.1:59939921-59939940 | MS.gene46516:intron | 40.0% | |
| ACCAACAGAGTCTACATTCA+GGG | - | chr7.1:59938919-59938938 | None:intergenic | 40.0% | |
| ACCAGAAACTGAGGAAGTAA+GGG | - | chr7.1:59942286-59942305 | None:intergenic | 40.0% | |
| ACTAACGGAGTATGCATTCA+GGG | + | chr7.1:59938991-59939010 | MS.gene46516:intron | 40.0% | |
| ACTAACGGAGTCTACATTCA+GGG | + | chr7.1:59938959-59938978 | MS.gene46516:intron | 40.0% | |
| AGACTCTGTTGGTCAATTTC+AGG | + | chr7.1:59938926-59938945 | MS.gene46516:intron | 40.0% | |
| AGATTCTACTATGGATCTGG+AGG | - | chr7.1:59942563-59942582 | None:intergenic | 40.0% | |
| ATACACACTCATTCTGCGTT+TGG | + | chr7.1:59939642-59939661 | MS.gene46516:intron | 40.0% | |
| ATATGCAGACGACATACCAA+AGG | - | chr7.1:59941770-59941789 | None:intergenic | 40.0% | |
| ATGAGCCATGTTACAATCCT+CGG | + | chr7.1:59942519-59942538 | MS.gene46516:intron | 40.0% | |
| ATTGATGCACGTGATGTCAA+GGG | + | chr7.1:59941577-59941596 | MS.gene46516:CDS | 40.0% | |
| CTTTACGTCAGCATTAATGC+CGG | - | chr7.1:59940881-59940900 | None:intergenic | 40.0% | |
| CTTTAGTCCCTGAATAGGAA+AGG | - | chr7.1:59939093-59939112 | None:intergenic | 40.0% | |
| GAAAAAAAAAAGGGCAGGCA+GGG | - | chr7.1:59942257-59942276 | None:intergenic | 40.0% | |
| GACTACTCATTTCCCATTCA+GGG | - | chr7.1:59938859-59938878 | None:intergenic | 40.0% | |
| GACTCTGTTGGTCAATTTCA+GGG | + | chr7.1:59938927-59938946 | MS.gene46516:intron | 40.0% | |
| GAGAGAATAAGAACACAACG+TGG | + | chr7.1:59940419-59940438 | MS.gene46516:intron | 40.0% | |
| GAGAGAGTGAGAGAAAACTT+AGG | - | chr7.1:59942118-59942137 | None:intergenic | 40.0% | |
| GCATCAATCTTCACAGATTC+TGG | - | chr7.1:59941565-59941584 | None:intergenic | 40.0% | |
| GCATTTCTGCTTGTAGAAGA+TGG | + | chr7.1:59941732-59941751 | MS.gene46516:intron | 40.0% | |
| GCTCATAAGATCCTACCAAA+GGG | - | chr7.1:59942505-59942524 | None:intergenic | 40.0% | |
| GGGGATAGAAATCATAGTCT+GGG | + | chr7.1:59940100-59940119 | MS.gene46516:intron | 40.0% | |
| GTTATCATGACGAGCTTCAA+TGG | + | chr7.1:59941263-59941282 | MS.gene46516:intron | 40.0% | |
| TCAGGGACTAAAGTGACTAA+CGG | + | chr7.1:59938944-59938963 | MS.gene46516:intron | 40.0% | |
| TCATGTTGAAATATCCGTGC+TGG | - | chr7.1:59941634-59941653 | None:intergenic | 40.0% | |
| TCGAGATTCTACTATGGATC+TGG | - | chr7.1:59942566-59942585 | None:intergenic | 40.0% | |
| TGAAAAAAAAAAGGGCAGGC+AGG | - | chr7.1:59942258-59942277 | None:intergenic | 40.0% | |
| TGACTACTCATTTCCCATTC+AGG | - | chr7.1:59938860-59938879 | None:intergenic | 40.0% | |
| TGGTGAAAGGGGAATTAATG+AGG | + | chr7.1:59941815-59941834 | MS.gene46516:intron | 40.0% | |
| TGTAAGAACATCCCCAATGA+GGG | + | chr7.1:59941945-59941964 | MS.gene46516:intron | 40.0% | |
| TTCTGCAATTGAGTGAGTGT+AGG | - | chr7.1:59940139-59940158 | None:intergenic | 40.0% | |
| TTGTAAGAACATCCCCAATG+AGG | + | chr7.1:59941944-59941963 | MS.gene46516:intron | 40.0% | |
| TTTACGTCAGCATTAATGCC+GGG | - | chr7.1:59940880-59940899 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | - | chr7.1:59938894-59938875 | None:intergenic | 40.0% |
| ! | CTGAAGTGGGTCATATTTTG+TGG | + | chr7.1:59942019-59942038 | MS.gene46516:intron | 40.0% |
| ! | CTTATGGTTTTCAATCCGGT+AGG | + | chr7.1:59940757-59940776 | MS.gene46516:CDS | 40.0% |
| ! | GAATGGCTACCCTATTTTGT+TGG | + | chr7.1:59940064-59940083 | MS.gene46516:intron | 40.0% |
| ! | TGTTGGTAGAAATAGCTAGG+GGG | + | chr7.1:59940081-59940100 | MS.gene46516:intron | 40.0% |
| ! | TTGGCTCAACTGTTTTGCAA+CGG | + | chr7.1:59941990-59942009 | MS.gene46516:intron | 40.0% |
| !! | AACCCTCATTGAAGAGTGTT+CGG | - | chr7.1:59940846-59940865 | None:intergenic | 40.0% |
| !! | GATGCCAAGTTCCATTTTTC+TGG | - | chr7.1:59941147-59941166 | None:intergenic | 40.0% |
| !! | TTTCTGGTTACATTGACCAG+AGG | + | chr7.1:59942655-59942674 | MS.gene46516:intron | 40.0% |
| !! | TTTTTCCTTAACTTGGGGTC+TGG | - | chr7.1:59938514-59938533 | None:intergenic | 40.0% |
| !!! | CAGCTCATGCTATTTTGTCA+GGG | - | chr7.1:59939997-59940016 | None:intergenic | 40.0% |
| !!! | TCAGCTCATGCTATTTTGTC+AGG | - | chr7.1:59939998-59940017 | None:intergenic | 40.0% |
| AAAAGCCAGTTGGTCAGAAG+AGG | - | chr7.1:59941071-59941090 | None:intergenic | 45.0% | |
| AATCATGTAAGCCAGGGTGA+TGG | + | chr7.1:59940509-59940528 | MS.gene46516:intron | 45.0% | |
| ACCATCAATAACACCCACCA+TGG | + | chr7.1:59940618-59940637 | MS.gene46516:intron | 45.0% | |
| AGAAAGCTGAGCATCTGCAA+TGG | - | chr7.1:59942640-59942659 | None:intergenic | 45.0% | |
| AGAGAATGCACAGACGAGAA+CGG | - | chr7.1:59942197-59942216 | None:intergenic | 45.0% | |
| AGAGGACACGGTTATAAAGC+AGG | - | chr7.1:59939951-59939970 | None:intergenic | 45.0% | |
| AGTCACGTTAGTCCCTGAAT+GGG | + | chr7.1:59938844-59938863 | MS.gene46516:intron | 45.0% | |
| ATAACCGTGTCCTCTGTTCT+GGG | + | chr7.1:59939956-59939975 | MS.gene46516:intron | 45.0% | |
| ATAGAAAGGATCTAGGGGTC+GGG | + | chr7.1:59941858-59941877 | MS.gene46516:intron | 45.0% | |
| ATAGGCACCCAATGGTGAAA+GGG | + | chr7.1:59941803-59941822 | MS.gene46516:intron | 45.0% | |
| ATTGCAGATGCTCAGCTTTC+TGG | + | chr7.1:59942639-59942658 | MS.gene46516:intron | 45.0% | |
| CAAGGTGAACCGACAAACTT+TGG | - | chr7.1:59940173-59940192 | None:intergenic | 45.0% | |
| CACTTTCTTTGATGAGACGC+AGG | + | chr7.1:59942064-59942083 | MS.gene46516:intron | 45.0% | |
| CGGCATTAATGCTGACGTAA+AGG | + | chr7.1:59940879-59940898 | MS.gene46516:CDS | 45.0% | |
| CGGTTCACCTTGTGATTTAC+TGG | + | chr7.1:59940181-59940200 | MS.gene46516:intron | 45.0% | |
| CGTTAGAAAGCAACCATGGT+GGG | - | chr7.1:59940634-59940653 | None:intergenic | 45.0% | |
| CTAGTCTACGATCCCTCATT+GGG | - | chr7.1:59941960-59941979 | None:intergenic | 45.0% | |
| CTGTTCATGCCACTACTTGT+TGG | + | chr7.1:59942788-59942807 | MS.gene46516:intron | 45.0% | |
| GAACCGAACACTCTTCAATG+AGG | + | chr7.1:59940840-59940859 | MS.gene46516:CDS | 45.0% | |
| GACCAACAGAGTCTACATTC+AGG | - | chr7.1:59938920-59938939 | None:intergenic | 45.0% | |
| GACGACTCCTTTCCTATTCA+GGG | + | chr7.1:59939083-59939102 | MS.gene46516:intron | 45.0% | |
| GACTAACGGAGTATGCATTC+AGG | + | chr7.1:59938990-59939009 | MS.gene46516:intron | 45.0% | |
| GACTAACGGAGTCTACATTC+AGG | + | chr7.1:59938958-59938977 | MS.gene46516:intron | 45.0% | |
| GACTCGTTAGAAAGCAACCA+TGG | - | chr7.1:59940638-59940657 | None:intergenic | 45.0% | |
| GAGGACACGGTTATAAAGCA+GGG | - | chr7.1:59939950-59939969 | None:intergenic | 45.0% | |
| GATTGATGCACGTGATGTCA+AGG | + | chr7.1:59941576-59941595 | MS.gene46516:CDS | 45.0% | |
| GGATAAAAGATCGTAACCCG+AGG | - | chr7.1:59942539-59942558 | None:intergenic | 45.0% | |
| GGCTCATAAGATCCTACCAA+AGG | - | chr7.1:59942506-59942525 | None:intergenic | 45.0% | |
| GGGGATGTTCTTACAATGCA+AGG | - | chr7.1:59941940-59941959 | None:intergenic | 45.0% | |
| GGGGGATAGAAATCATAGTC+TGG | + | chr7.1:59940099-59940118 | MS.gene46516:intron | 45.0% | |
| GTAACCCGAGGATTGTAACA+TGG | - | chr7.1:59942527-59942546 | None:intergenic | 45.0% | |
| GTCTTGCACCCAAAGTTTGT+CGG | + | chr7.1:59940161-59940180 | MS.gene46516:intron | 45.0% | |
| GTGTTATGATAGGCACCCAA+TGG | + | chr7.1:59941795-59941814 | MS.gene46516:intron | 45.0% | |
| GTTATCCTCTTCTGACCAAC+TGG | + | chr7.1:59941063-59941082 | MS.gene46516:intron | 45.0% | |
| GTTGAAATATCCGTGCTGGA+AGG | - | chr7.1:59941630-59941649 | None:intergenic | 45.0% | |
| TACACGACACGGTTCAAACA+GGG | - | chr7.1:59942346-59942365 | None:intergenic | 45.0% | |
| TAGTCACGTTAGTCCCTGAA+TGG | + | chr7.1:59938843-59938862 | MS.gene46516:intron | 45.0% | |
| TAGTCTACGATCCCTCATTG+GGG | - | chr7.1:59941959-59941978 | None:intergenic | 45.0% | |
| TATAAAGCAGGGACACCTCT+GGG | - | chr7.1:59939939-59939958 | None:intergenic | 45.0% | |
| TATAACCGTGTCCTCTGTTC+TGG | + | chr7.1:59939955-59939974 | MS.gene46516:intron | 45.0% | |
| TCCCTGAATGTAGACTCTGT+TGG | + | chr7.1:59938915-59938934 | MS.gene46516:intron | 45.0% | |
| TCGTTAGAAAGCAACCATGG+TGG | - | chr7.1:59940635-59940654 | None:intergenic | 45.0% | |
| TGACGACTCCTTTCCTATTC+AGG | + | chr7.1:59939082-59939101 | MS.gene46516:intron | 45.0% | |
| TGAGCCATGTTACAATCCTC+GGG | + | chr7.1:59942520-59942539 | MS.gene46516:intron | 45.0% | |
| TTACACGACACGGTTCAAAC+AGG | - | chr7.1:59942347-59942366 | None:intergenic | 45.0% | |
| TTACGTCAGCATTAATGCCG+GGG | - | chr7.1:59940879-59940898 | None:intergenic | 45.0% | |
| TTATAAAGCAGGGACACCTC+TGG | - | chr7.1:59939940-59939959 | None:intergenic | 45.0% | |
| TTCTACTATGGATCTGGAGG+AGG | - | chr7.1:59942560-59942579 | None:intergenic | 45.0% | |
| ! | CGGTTTTCAGTCAGTTTGTC+TGG | + | chr7.1:59941604-59941623 | MS.gene46516:CDS | 45.0% |
| ! | GATGAAGAAGATGACTTGGG+AGG | - | chr7.1:59938231-59938250 | None:intergenic | 45.0% |
| ! | TGAAGCTGAAAAAGCGGACT+TGG | - | chr7.1:59938338-59938357 | None:intergenic | 45.0% |
| !! | ACCATGGTGGGTGTTATTGA+TGG | - | chr7.1:59940622-59940641 | None:intergenic | 45.0% |
| !!! | TCTTCTGACCAACTGGCTTT+TGG | + | chr7.1:59941070-59941089 | MS.gene46516:intron | 45.0% |
| AAAAAAGGGCAGGCAGGGAA+AGG | - | chr7.1:59942252-59942271 | None:intergenic | 50.0% | |
| AAAGGTGGAGAACACGTTGC+AGG | - | chr7.1:59942234-59942253 | None:intergenic | 50.0% | |
| AAGTCCCAGAACAGAGGACA+CGG | - | chr7.1:59939963-59939982 | None:intergenic | 50.0% | |
| AATGGAGCTCCCCTCATTTG+GGG | - | chr7.1:59942622-59942641 | None:intergenic | 50.0% | |
| AGACAGAAGTCCCAGAACAG+AGG | - | chr7.1:59939969-59939988 | None:intergenic | 50.0% | |
| AGAGAGTCAGGTGGAAGAAG+CGG | - | chr7.1:59938300-59938319 | None:intergenic | 50.0% | |
| CAAGAAGGAGCAACATCGCA+GGG | - | chr7.1:59942154-59942173 | None:intergenic | 50.0% | |
| CAATGGAGCTCCCCTCATTT+GGG | - | chr7.1:59942623-59942642 | None:intergenic | 50.0% | |
| CACGTGATGTCAAGGGAACA+CGG | + | chr7.1:59941584-59941603 | MS.gene46516:CDS | 50.0% | |
| CCAATGAGGGATCGTAGACT+AGG | + | chr7.1:59941958-59941977 | MS.gene46516:intron | 50.0% | |
| CCTAGTCTACGATCCCTCAT+TGG | - | chr7.1:59941961-59941980 | None:intergenic | 50.0% | |
| GACACGGTTCAAACAGGGTA+GGG | - | chr7.1:59942341-59942360 | None:intergenic | 50.0% | |
| GAGGGTTGTCTATCTTTCCC+CGG | + | chr7.1:59940859-59940878 | MS.gene46516:CDS | 50.0% | |
| GATAGGCACCCAATGGTGAA+AGG | + | chr7.1:59941802-59941821 | MS.gene46516:intron | 50.0% | |
| GCCCTTACTTCCTCAGTTTC+TGG | + | chr7.1:59942282-59942301 | MS.gene46516:intron | 50.0% | |
| GTAGACTAGGATCGCACGTT+TGG | + | chr7.1:59941971-59941990 | MS.gene46516:intron | 50.0% | |
| TAGGCACCCAATGGTGAAAG+GGG | + | chr7.1:59941804-59941823 | MS.gene46516:intron | 50.0% | |
| TGAGCGCTTACCCCAAATGA+GGG | + | chr7.1:59942609-59942628 | MS.gene46516:intron | 50.0% | |
| TTGAGCGCTTACCCCAAATG+AGG | + | chr7.1:59942608-59942627 | MS.gene46516:intron | 50.0% | |
| ! | GTGGAAGAAGCGGTTTGGAA+TGG | - | chr7.1:59938290-59938309 | None:intergenic | 50.0% |
| !! | CTGAAAAAGCGGACTTGGTG+CGG | - | chr7.1:59938333-59938352 | None:intergenic | 50.0% |
| CGACACGGTTCAAACAGGGT+AGG | - | chr7.1:59942342-59942361 | None:intergenic | 55.0% | |
| GAGCGCTTACCCCAAATGAG+GGG | + | chr7.1:59942610-59942629 | MS.gene46516:intron | 55.0% | |
| GCAACGGACCTTGCTGAAGT+GGG | + | chr7.1:59942006-59942025 | MS.gene46516:intron | 55.0% | |
| GCAAGAAGGAGCAACATCGC+AGG | - | chr7.1:59942155-59942174 | None:intergenic | 55.0% | |
| GCAATGGAGCTCCCCTCATT+TGG | - | chr7.1:59942624-59942643 | None:intergenic | 55.0% | |
| GGCACTCACCAAAAGCCAGT+TGG | - | chr7.1:59941081-59941100 | None:intergenic | 55.0% | |
| GGTCTTTCAGCACCCCAAGT+AGG | + | chr7.1:59940721-59940740 | MS.gene46516:CDS | 55.0% | |
| GGTTCAAACAGGGTAGGGCA+GGG | - | chr7.1:59942336-59942355 | None:intergenic | 55.0% | |
| GTCAGGTGGAAGAAGCGGTT+TGG | - | chr7.1:59938295-59938314 | None:intergenic | 55.0% | |
| GTTCAAACAGGGTAGGGCAG+GGG | - | chr7.1:59942335-59942354 | None:intergenic | 55.0% | |
| TGCAACGGACCTTGCTGAAG+TGG | + | chr7.1:59942005-59942024 | MS.gene46516:intron | 55.0% | |
| TGGCAGCAAGTGCAGAACAG+CGG | - | chr7.1:59938270-59938289 | None:intergenic | 55.0% | |
| TTCAAACAGGGTAGGGCAGG+GGG | - | chr7.1:59942334-59942353 | None:intergenic | 55.0% | |
| TTCAATCCGGTAGGCGAACG+TGG | + | chr7.1:59940766-59940785 | MS.gene46516:CDS | 55.0% | |
| ! | GTTTGTCTGGCCTTCCAGCA+CGG | + | chr7.1:59941617-59941636 | MS.gene46516:CDS | 55.0% |
| !! | CAGTTGGTGGCAGTGCAAGA+AGG | - | chr7.1:59942169-59942188 | None:intergenic | 55.0% |
| !! | CTGGCTTTTGGTGAGTGCCA+CGG | + | chr7.1:59941082-59941101 | MS.gene46516:intron | 55.0% |
| AAAGGGCAGGCAGGGAAAGG+TGG | - | chr7.1:59942249-59942268 | None:intergenic | 60.0% | |
| CAAGTGCAGAACAGCGGTGG+TGG | - | chr7.1:59938264-59938283 | None:intergenic | 60.0% | |
| CAGCAAGTGCAGAACAGCGG+TGG | - | chr7.1:59938267-59938286 | None:intergenic | 60.0% | |
| CCTTCACCACGTTCGCCTAC+CGG | - | chr7.1:59940775-59940794 | None:intergenic | 60.0% | |
| CGGTTCAAACAGGGTAGGGC+AGG | - | chr7.1:59942337-59942356 | None:intergenic | 60.0% | |
| GAAGGAGCAACATCGCAGGG+AGG | - | chr7.1:59942151-59942170 | None:intergenic | 60.0% | |
| GACGAGAACGGCGTTGCAGT+TGG | - | chr7.1:59942185-59942204 | None:intergenic | 60.0% | |
| GAGAACGGCGTTGCAGTTGG+TGG | - | chr7.1:59942182-59942201 | None:intergenic | 60.0% | |
| GGTGGAGAACACGTTGCAGG+CGG | - | chr7.1:59942231-59942250 | None:intergenic | 60.0% | |
| TGGAGGAGGAGAGAGTCAGG+TGG | - | chr7.1:59938309-59938328 | None:intergenic | 60.0% | |
| ! | CAGAACAGCGGTGGTGGTGT+TGG | - | chr7.1:59938258-59938277 | None:intergenic | 60.0% |
| !! | AAAAGCGGACTTGGTGCGGC+TGG | - | chr7.1:59938329-59938348 | None:intergenic | 60.0% |
| !! | AGCAGGGACACCTCTGGGAT+TGG | - | chr7.1:59939934-59939953 | None:intergenic | 60.0% |
| CCGGTAGGCGAACGTGGTGA+AGG | + | chr7.1:59940772-59940791 | MS.gene46516:CDS | 65.0% | |
| GGCTGGAGGAGGAGAGAGTC+AGG | - | chr7.1:59938312-59938331 | None:intergenic | 65.0% | |
| !! | AGCGGACTTGGTGCGGCTGG+AGG | - | chr7.1:59938326-59938345 | None:intergenic | 70.0% |
| !! | GGACTTGGTGCGGCTGGAGG+AGG | - | chr7.1:59938323-59938342 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 59938217 | 59942921 | 59938217 | ID=MS.gene46516 |
| chr7.1 | mRNA | 59938217 | 59942921 | 59938217 | ID=MS.gene46516.t1;Parent=MS.gene46516 |
| chr7.1 | exon | 59938217 | 59938376 | 59938217 | ID=MS.gene46516.t1.exon1;Parent=MS.gene46516.t1 |
| chr7.1 | CDS | 59938217 | 59938376 | 59938217 | ID=cds.MS.gene46516.t1;Parent=MS.gene46516.t1 |
| chr7.1 | exon | 59938467 | 59938605 | 59938467 | ID=MS.gene46516.t1.exon2;Parent=MS.gene46516.t1 |
| chr7.1 | CDS | 59938467 | 59938605 | 59938467 | ID=cds.MS.gene46516.t1;Parent=MS.gene46516.t1 |
| chr7.1 | exon | 59940708 | 59940900 | 59940708 | ID=MS.gene46516.t1.exon3;Parent=MS.gene46516.t1 |
| chr7.1 | CDS | 59940708 | 59940900 | 59940708 | ID=cds.MS.gene46516.t1;Parent=MS.gene46516.t1 |
| chr7.1 | exon | 59941559 | 59941669 | 59941559 | ID=MS.gene46516.t1.exon4;Parent=MS.gene46516.t1 |
| chr7.1 | CDS | 59941559 | 59941669 | 59941559 | ID=cds.MS.gene46516.t1;Parent=MS.gene46516.t1 |
| chr7.1 | exon | 59942859 | 59942921 | 59942859 | ID=MS.gene46516.t1.exon5;Parent=MS.gene46516.t1 |
| chr7.1 | CDS | 59942859 | 59942921 | 59942859 | ID=cds.MS.gene46516.t1;Parent=MS.gene46516.t1 |
| Gene Sequence |
| Protein sequence |
