Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57998.t1 | XP_003609470.2 | 97.7 | 395 | 9 | 0 | 1 | 395 | 129 | 523 | 6.60E-217 | 763.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57998.t1 | Q3E9A0 | 76.5 | 396 | 89 | 1 | 1 | 396 | 117 | 508 | 1.3e-176 | 620.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57998.t1 | G7JGK7 | 97.7 | 395 | 9 | 0 | 1 | 395 | 129 | 523 | 4.7e-217 | 763.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57998 | 0.845593 | 3.69E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene57998 | 0.806433 | 8.25E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene57998 | 0.862636 | 4.40E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene57998 | 0.891158 | 5.13E-74 | -1.69E-46 |
| MS.gene049285 | MS.gene57998 | 0.829871 | 4.04E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene57998 | 0.833268 | 5.88E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene57998 | 0.841752 | 3.93E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene57998 | 0.872634 | 2.74E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene57998 | 0.826681 | 2.37E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene57998 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene57998 | 0.809147 | 2.18E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene57998 | 0.866811 | 2.17E-65 | -1.69E-46 |
| MS.gene050216 | MS.gene57998 | 0.874673 | 5.62E-68 | -1.69E-46 |
| MS.gene050323 | MS.gene57998 | 0.89179 | 2.88E-74 | -1.69E-46 |
| MS.gene050333 | MS.gene57998 | 0.80795 | 3.93E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene57998 | -0.801229 | 9.94E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene57998 | -0.813297 | 2.75E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene57998 | 0.849496 | 3.11E-60 | -1.69E-46 |
| MS.gene050502 | MS.gene57998 | 0.822835 | 1.91E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene57998 | 0.866443 | 2.84E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene57998 | 0.834815 | 2.41E-56 | -1.69E-46 |
| MS.gene050553 | MS.gene57998 | 0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene57998 | 0.849416 | 3.28E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene57998 | 0.865174 | 7.15E-65 | -1.69E-46 |
| MS.gene050662 | MS.gene57998 | 0.821434 | 4.05E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene57998 | 0.839211 | 1.82E-57 | -1.69E-46 |
| MS.gene050697 | MS.gene57998 | 0.824729 | 6.89E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene57998 | 0.829859 | 4.07E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene57998 | 0.81732 | 3.51E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene57998 | 0.885231 | 9.72E-72 | -1.69E-46 |
| MS.gene050868 | MS.gene57998 | 0.910401 | 1.95E-82 | -1.69E-46 |
| MS.gene050871 | MS.gene57998 | 0.910716 | 1.37E-82 | -1.69E-46 |
| MS.gene050904 | MS.gene57998 | 0.85628 | 3.58E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene57998 | 0.822578 | 2.20E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene57998 | 0.835596 | 1.53E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene57998 | -0.816317 | 5.89E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene57998 | -0.8264 | 2.77E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene57998 | 0.855273 | 7.05E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene57998 | 0.826378 | 2.80E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene57998 | 0.854227 | 1.42E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene57998 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene57998 | -0.811729 | 6.05E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene57998 | 0.825989 | 3.47E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene57998 | 0.807284 | 5.45E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene57998 | 0.86164 | 8.90E-64 | -1.69E-46 |
| MS.gene052066 | MS.gene57998 | 0.861822 | 7.83E-64 | -1.69E-46 |
| MS.gene052100 | MS.gene57998 | 0.807113 | 5.92E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene57998 | 0.883192 | 5.53E-71 | -1.69E-46 |
| MS.gene052482 | MS.gene57998 | 0.854812 | 9.59E-62 | -1.69E-46 |
| MS.gene052486 | MS.gene57998 | 0.851845 | 6.81E-61 | -1.69E-46 |
| MS.gene052494 | MS.gene57998 | -0.80587 | 1.08E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene57998 | 0.805403 | 1.36E-49 | -1.69E-46 |
| MS.gene052504 | MS.gene57998 | 0.810523 | 1.10E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene57998 | 0.836725 | 7.91E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene57998 | 0.835094 | 2.05E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene57998 | 0.806655 | 7.40E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene57998 | 0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene57998 | 0.858024 | 1.09E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene57998 | 0.859718 | 3.41E-63 | -1.69E-46 |
| MS.gene053420 | MS.gene57998 | -0.816792 | 4.61E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene57998 | 0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene57998 | 0.848337 | 6.54E-60 | -1.69E-46 |
| MS.gene053626 | MS.gene57998 | 0.86729 | 1.53E-65 | -1.69E-46 |
| MS.gene053633 | MS.gene57998 | 0.856676 | 2.74E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene57998 | 0.831431 | 1.68E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene57998 | 0.805534 | 1.27E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene57998 | 0.827612 | 1.42E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene57998 | 0.858195 | 9.73E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene57998 | 0.870103 | 1.88E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene57998 | 0.815654 | 8.28E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene57998 | -0.819976 | 8.75E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene57998 | 0.855764 | 5.07E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene57998 | 0.852395 | 4.75E-61 | -1.69E-46 |
| MS.gene055224 | MS.gene57998 | 0.809658 | 1.70E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene57998 | 0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene57998 | 0.858508 | 7.85E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene57998 | 0.856669 | 2.75E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene57998 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene57998 | 0.874446 | 6.71E-68 | -1.69E-46 |
| MS.gene055750 | MS.gene57998 | 0.881165 | 3.01E-70 | -1.69E-46 |
| MS.gene055751 | MS.gene57998 | 0.882703 | 8.34E-71 | -1.69E-46 |
| MS.gene055776 | MS.gene57998 | 0.828963 | 6.71E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene57998 | 0.888543 | 5.38E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene57998 | 0.816992 | 4.15E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene57998 | 0.808788 | 2.61E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene57998 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene57998 | 0.849908 | 2.39E-60 | -1.69E-46 |
| MS.gene056283 | MS.gene57998 | 0.816583 | 5.13E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene57998 | 0.843049 | 1.78E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene57998 | 0.843613 | 1.26E-58 | -1.69E-46 |
| MS.gene056446 | MS.gene57998 | 0.814769 | 1.30E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene57998 | 0.889277 | 2.80E-73 | -1.69E-46 |
| MS.gene056510 | MS.gene57998 | 0.882321 | 1.15E-70 | -1.69E-46 |
| MS.gene056549 | MS.gene57998 | 0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene57998 | 0.827904 | 1.21E-54 | -1.69E-46 |
| MS.gene056878 | MS.gene57998 | 0.804233 | 2.38E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene57998 | 0.821835 | 3.27E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene57998 | 0.881872 | 1.67E-70 | -1.69E-46 |
| MS.gene05753 | MS.gene57998 | 0.81386 | 2.07E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene57998 | 0.804693 | 1.91E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene57998 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene57998 | 0.806259 | 8.97E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene57998 | 0.807152 | 5.81E-50 | -1.69E-46 |
| MS.gene057872 | MS.gene57998 | 0.808408 | 3.14E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene57998 | 0.848738 | 5.06E-60 | -1.69E-46 |
| MS.gene058157 | MS.gene57998 | 0.81638 | 5.70E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene57998 | -0.860956 | 1.44E-63 | -1.69E-46 |
| MS.gene058173 | MS.gene57998 | -0.862337 | 5.44E-64 | -1.69E-46 |
| MS.gene058175 | MS.gene57998 | -0.865072 | 7.70E-65 | -1.69E-46 |
| MS.gene058334 | MS.gene57998 | -0.840785 | 7.05E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene57998 | 0.849082 | 4.06E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene57998 | 0.833266 | 5.89E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene57998 | 0.831925 | 1.27E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene57998 | 0.813905 | 2.02E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene57998 | 0.828022 | 1.13E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene57998 | 0.815133 | 1.08E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene57998 | -0.843532 | 1.32E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene57998 | 0.849825 | 2.52E-60 | -1.69E-46 |
| MS.gene059305 | MS.gene57998 | 0.818671 | 1.74E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene57998 | 0.856687 | 2.72E-62 | -1.69E-46 |
| MS.gene059368 | MS.gene57998 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene57998 | 0.855641 | 5.50E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene57998 | 0.805469 | 1.31E-49 | -1.69E-46 |
| MS.gene059699 | MS.gene57998 | -0.82436 | 8.42E-54 | -1.69E-46 |
| MS.gene059703 | MS.gene57998 | -0.844889 | 5.72E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene57998 | 0.823973 | 1.04E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene57998 | 0.809301 | 2.03E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene57998 | 0.912489 | 1.84E-83 | -1.69E-46 |
| MS.gene05996 | MS.gene57998 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene57998 | 0.8662 | 3.39E-65 | -1.69E-46 |
| MS.gene060295 | MS.gene57998 | 0.852972 | 3.25E-61 | -1.69E-46 |
| MS.gene060482 | MS.gene57998 | 0.821166 | 4.67E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene57998 | -0.810749 | 9.87E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene57998 | -0.829848 | 4.09E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene57998 | 0.820574 | 6.38E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene57998 | 0.875061 | 4.15E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene57998 | 0.886552 | 3.10E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene57998 | 0.841112 | 5.79E-58 | -1.69E-46 |
| MS.gene06080 | MS.gene57998 | -0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene06097 | MS.gene57998 | 0.864088 | 1.56E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene57998 | 0.903376 | 3.70E-79 | -1.69E-46 |
| MS.gene061044 | MS.gene57998 | -0.841823 | 3.76E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene57998 | 0.805263 | 1.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57998 | MS.gene023903 | PPI |
| MS.gene030874 | MS.gene57998 | PPI |
| MS.gene57998 | MS.gene019648 | PPI |
| MS.gene57998 | MS.gene57358 | PPI |
| MS.gene27999 | MS.gene57998 | PPI |
| MS.gene57998 | MS.gene51840 | PPI |
| MS.gene47969 | MS.gene57998 | PPI |
| MS.gene019649 | MS.gene57998 | PPI |
| MS.gene57998 | MS.gene84825 | PPI |
| MS.gene57998 | MS.gene48745 | PPI |
| MS.gene57998 | MS.gene043037 | PPI |
| MS.gene88037 | MS.gene57998 | PPI |
| MS.gene57998 | MS.gene45785 | PPI |
| MS.gene57998 | MS.gene056796 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57998.t1 | MTR_4g116030 | 97.475 | 396 | 10 | 0 | 1 | 396 | 129 | 524 | 0.0 | 772 |
| MS.gene57998.t1 | MTR_7g077830 | 43.216 | 398 | 216 | 6 | 1 | 397 | 143 | 531 | 4.87e-99 | 305 |
| MS.gene57998.t1 | MTR_3g463080 | 41.935 | 403 | 214 | 7 | 1 | 397 | 125 | 513 | 7.06e-98 | 301 |
| MS.gene57998.t1 | MTR_8g030600 | 42.965 | 398 | 217 | 5 | 1 | 397 | 197 | 585 | 1.33e-97 | 303 |
| MS.gene57998.t1 | MTR_8g030600 | 44.932 | 296 | 157 | 2 | 1 | 295 | 197 | 487 | 1.09e-75 | 244 |
| MS.gene57998.t1 | MTR_7g066780 | 33.501 | 397 | 257 | 5 | 1 | 396 | 113 | 503 | 2.33e-64 | 214 |
| MS.gene57998.t1 | MTR_4g030900 | 32.227 | 422 | 252 | 12 | 1 | 396 | 26 | 439 | 6.01e-55 | 187 |
| MS.gene57998.t1 | MTR_5g069630 | 32.391 | 389 | 253 | 4 | 1 | 384 | 116 | 499 | 1.26e-53 | 186 |
| MS.gene57998.t1 | MTR_2g027710 | 44.970 | 169 | 91 | 1 | 193 | 361 | 68 | 234 | 8.75e-42 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57998.t1 | AT5G20380 | 76.515 | 396 | 89 | 1 | 1 | 396 | 169 | 560 | 0.0 | 625 |
| MS.gene57998.t1 | AT5G20380 | 76.515 | 396 | 89 | 1 | 1 | 396 | 117 | 508 | 0.0 | 624 |
| MS.gene57998.t1 | AT2G29650 | 40.852 | 399 | 222 | 9 | 1 | 396 | 9 | 396 | 3.19e-97 | 296 |
| MS.gene57998.t1 | AT2G29650 | 40.554 | 397 | 222 | 9 | 3 | 396 | 1 | 386 | 1.15e-95 | 291 |
| MS.gene57998.t1 | AT2G29650 | 40.750 | 400 | 223 | 9 | 1 | 397 | 121 | 509 | 1.33e-95 | 295 |
| MS.gene57998.t1 | AT4G00370 | 41.542 | 402 | 217 | 7 | 1 | 397 | 150 | 538 | 6.39e-93 | 289 |
| MS.gene57998.t1 | AT2G29650 | 41.844 | 282 | 156 | 5 | 1 | 280 | 121 | 396 | 2.32e-69 | 224 |
| MS.gene57998.t1 | AT2G38060 | 33.835 | 399 | 255 | 5 | 1 | 396 | 117 | 509 | 3.20e-65 | 216 |
| MS.gene57998.t1 | AT3G46980 | 34.184 | 392 | 243 | 6 | 1 | 384 | 130 | 514 | 2.32e-57 | 196 |
| MS.gene57998.t1 | AT3G46980 | 34.184 | 392 | 243 | 6 | 1 | 384 | 130 | 514 | 2.34e-57 | 196 |
| MS.gene57998.t1 | AT3G46980 | 34.097 | 393 | 244 | 6 | 1 | 385 | 178 | 563 | 7.15e-57 | 196 |
| MS.gene57998.t1 | AT2G38060 | 34.104 | 346 | 220 | 4 | 1 | 343 | 117 | 457 | 8.17e-56 | 192 |
| MS.gene57998.t1 | AT5G44370 | 33.253 | 415 | 244 | 13 | 1 | 396 | 28 | 428 | 1.86e-51 | 178 |
| MS.gene57998.t1 | AT3G46980 | 32.249 | 338 | 214 | 6 | 55 | 384 | 4 | 334 | 1.22e-41 | 150 |
| MS.gene57998.t1 | AT3G46980 | 32.249 | 338 | 214 | 6 | 55 | 384 | 4 | 334 | 1.22e-41 | 150 |
| MS.gene57998.t1 | AT3G46980 | 32.249 | 338 | 214 | 6 | 55 | 384 | 4 | 334 | 1.45e-41 | 150 |
| MS.gene57998.t1 | AT3G46980 | 32.249 | 338 | 214 | 6 | 55 | 384 | 4 | 334 | 1.45e-41 | 150 |
| MS.gene57998.t1 | AT3G46980 | 30.545 | 275 | 177 | 5 | 117 | 384 | 3 | 270 | 8.97e-28 | 111 |
Find 109 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAATATTGACAAGGATTT+TGG | 0.164652 | 8.1:-11104495 | MS.gene57998:intron |
| TGGTTCAGTCTTCATTCTTT+TGG | 0.180185 | 8.1:-11107383 | MS.gene57998:CDS |
| CTTGAGTGTTGGAAGTGTTT+TGG | 0.223707 | 8.1:-11098409 | MS.gene57998:CDS |
| CATGAACTTTGAAGGTTTAC+AGG | 0.233069 | 8.1:-11098097 | MS.gene57998:intron |
| ATTCCAATGTCACATCAATT+TGG | 0.237726 | 8.1:-11107429 | MS.gene57998:CDS |
| CGCTCATTTCTGTGGTAGCT+GGG | 0.277548 | 8.1:-11097047 | MS.gene57998:CDS |
| ATGCAGCTTCTGTCAGATTT+AGG | 0.288340 | 8.1:+11096092 | None:intergenic |
| CGGGCAGTAGCATTTGTATT+TGG | 0.304853 | 8.1:-11098435 | MS.gene57998:CDS |
| ACGCTCATTTCTGTGGTAGC+TGG | 0.320626 | 8.1:-11097048 | MS.gene57998:CDS |
| CTCTCAAGCTTTGCCTTGTC+AGG | 0.324812 | 8.1:-11094426 | MS.gene57998:intron |
| TTCTTGATATGACTCATTCA+TGG | 0.352390 | 8.1:-11094068 | MS.gene57998:CDS |
| ACTCTTGCATCACTTGATCT+AGG | 0.365196 | 8.1:-11094495 | MS.gene57998:CDS |
| TTCAGGAATGTTCTTGTGGT+TGG | 0.367223 | 8.1:-11104578 | MS.gene57998:intron |
| GGTCTCTATTCTTCCACCTC+TGG | 0.397620 | 8.1:-11095170 | MS.gene57998:CDS |
| TTGCCCATACAGCGCGACTT+TGG | 0.399042 | 8.1:+11097077 | None:intergenic |
| CCGATTCCCAACCAAGACTT+TGG | 0.401668 | 8.1:+11098266 | None:intergenic |
| TGTTCTTGTGGTTGGAGTAC+TGG | 0.402220 | 8.1:-11104570 | MS.gene57998:CDS |
| CTCAAATAGAAGAAGATTGA+TGG | 0.403163 | 8.1:+11093939 | None:intergenic |
| GGCTAATTGTGATGCAATAC+TGG | 0.412097 | 8.1:+11095132 | None:intergenic |
| TTGGTTGTCCACAGCTGCCC+AGG | 0.413354 | 8.1:-11097381 | MS.gene57998:intron |
| AGAAGTATACTTGCATATTC+TGG | 0.415734 | 8.1:+11094253 | None:intergenic |
| GCCGACAGCTTGATTTCAAA+AGG | 0.437311 | 8.1:-11095112 | MS.gene57998:CDS |
| GCAGTAGCATTTGTATTTGG+TGG | 0.449430 | 8.1:-11098432 | MS.gene57998:CDS |
| GGGTTTCAATTTCTTGAAGA+AGG | 0.449891 | 8.1:-11098076 | MS.gene57998:CDS |
| CACAGGTTACCTAAAATATG+TGG | 0.450185 | 8.1:+11096997 | None:intergenic |
| AGGGCTACACCTACAATTCC+AGG | 0.458045 | 8.1:+11094102 | None:intergenic |
| AGAATATGCAAGTATACTTC+TGG | 0.458490 | 8.1:-11094251 | MS.gene57998:intron |
| AGAAATGAATGGCTCTTTGA+AGG | 0.458925 | 8.1:-11097324 | MS.gene57998:intron |
| CTCTCATCCAAAGTCTTGGT+TGG | 0.459400 | 8.1:-11098273 | MS.gene57998:CDS |
| TTGATCTAGGATTACCGCCT+TGG | 0.462304 | 8.1:-11094482 | MS.gene57998:CDS |
| TTTCTTGCTGGATATATGCC+CGG | 0.465783 | 8.1:-11104518 | MS.gene57998:CDS |
| TCTCATCCAAAGTCTTGGTT+GGG | 0.481302 | 8.1:-11098272 | MS.gene57998:CDS |
| CCAAAGTCTTGGTTGGGAAT+CGG | 0.481734 | 8.1:-11098266 | MS.gene57998:CDS |
| GGAGCTGTACCTGGAATTGT+AGG | 0.485738 | 8.1:-11094111 | MS.gene57998:CDS |
| GGCATATATCCAGCAAGAAA+AGG | 0.488185 | 8.1:+11104521 | None:intergenic |
| TGATCTAGGATTACCGCCTT+GGG | 0.494096 | 8.1:-11094481 | MS.gene57998:CDS |
| TGTGGGAAGCCATGAGAGAC+AGG | 0.497972 | 8.1:+11097015 | None:intergenic |
| AATACTGTTGGAGCTGTACC+TGG | 0.500410 | 8.1:-11094120 | MS.gene57998:CDS |
| GGATGGAACTCATCAACAGC+AGG | 0.501875 | 8.1:-11107408 | MS.gene57998:CDS |
| CAATGTCACATCAATTTGGA+TGG | 0.502371 | 8.1:-11107425 | MS.gene57998:CDS |
| CCTCCTCTCATCCAAAGTCT+TGG | 0.503911 | 8.1:-11098277 | MS.gene57998:CDS |
| TTTCCAAAGTCGCGCTGTAT+GGG | 0.505156 | 8.1:-11097080 | MS.gene57998:CDS |
| ATCCTTGTCAATATTAAGCC+GGG | 0.506912 | 8.1:+11104500 | None:intergenic |
| ATTGTAGGTGTAGCCCTCAC+TGG | 0.507479 | 8.1:-11094096 | MS.gene57998:CDS |
| CATCCAAATTGATGTGACAT+TGG | 0.507939 | 8.1:+11107426 | None:intergenic |
| AGGTACAGCTCCAACAGTAT+TGG | 0.509676 | 8.1:+11094122 | None:intergenic |
| GTCACTATACCTGTCTCTCA+TGG | 0.510101 | 8.1:-11097024 | MS.gene57998:CDS |
| GCCCGTGAGCGCTCTTCCAA+TGG | 0.510257 | 8.1:+11098453 | None:intergenic |
| TACCATTGGAAGAGCGCTCA+CGG | 0.514483 | 8.1:-11098455 | MS.gene57998:CDS |
| CCGCTACCGATCTCATTGCC+AGG | 0.516676 | 8.1:-11102516 | MS.gene57998:intron |
| ATGATTGTGTCATGTTACCC+TGG | 0.520309 | 8.1:+11097363 | None:intergenic |
| AGGATTACCGCCTTGGGAGA+TGG | 0.522528 | 8.1:-11094475 | MS.gene57998:CDS |
| TTTCATATCTAGGTTGGGAT+AGG | 0.526913 | 8.1:-11102559 | MS.gene57998:intron |
| TATGATGTGTAGTCAGGAGC+TGG | 0.529171 | 8.1:-11096116 | MS.gene57998:intron |
| GCAAGAGTCATGCAGAATGC+AGG | 0.530052 | 8.1:+11094510 | None:intergenic |
| TTATTTCTAATAGACGATGC+TGG | 0.530501 | 8.1:-11093667 | MS.gene57998:intron |
| AATCCTTGTCAATATTAAGC+CGG | 0.531256 | 8.1:+11104499 | None:intergenic |
| ATTTGAGTGGTACCGCCGTA+TGG | 0.534304 | 8.1:-11093923 | MS.gene57998:CDS |
| ACTTCTCTAAAAGAAATGAA+TGG | 0.535919 | 8.1:-11097335 | MS.gene57998:CDS |
| TCAATCTTCTTCTATTTGAG+TGG | 0.536064 | 8.1:-11093936 | MS.gene57998:CDS |
| GAACTCATCAACAGCAGGGT+TGG | 0.538474 | 8.1:-11107403 | MS.gene57998:CDS |
| AAATCTGACAGAAGCTGCAT+GGG | 0.540394 | 8.1:-11096089 | MS.gene57998:intron |
| CAGGGTATAACCAATACTGT+TGG | 0.543226 | 8.1:-11094132 | MS.gene57998:CDS |
| CTGACAAGGCAAAGCTTGAG+AGG | 0.543277 | 8.1:+11094427 | None:intergenic |
| CATGTGCAGGTCAATACCAT+TGG | 0.546685 | 8.1:-11098469 | MS.gene57998:intron |
| GTATTTGGTGGCTTGAGTGT+TGG | 0.550561 | 8.1:-11098420 | MS.gene57998:CDS |
| TTCTAATAGACGATGCTGGT+TGG | 0.551415 | 8.1:-11093663 | MS.gene57998:intron |
| CCTGGCAATGAGATCGGTAG+CGG | 0.552133 | 8.1:+11102516 | None:intergenic |
| ATGAGATCGGTAGCGGCAGA+TGG | 0.553337 | 8.1:+11102523 | None:intergenic |
| TAAATCTGACAGAAGCTGCA+TGG | 0.554822 | 8.1:-11096090 | MS.gene57998:CDS |
| GAGATGGTCGGCCTTCTCAC+AGG | 0.555700 | 8.1:-11094459 | MS.gene57998:CDS |
| TGAGTCAATTGCCTGGTGGT+TGG | 0.557474 | 8.1:-11107350 | MS.gene57998:CDS |
| TATGCATTGAGTCAATTGCC+TGG | 0.562033 | 8.1:-11107357 | MS.gene57998:CDS |
| AATGTAGGATGTACCATGGA+AGG | 0.563009 | 8.1:-11097107 | MS.gene57998:intron |
| TACATGCCTGGCAATGAGAT+CGG | 0.567752 | 8.1:+11102510 | None:intergenic |
| CAACCAAGACTTTGGATGAG+AGG | 0.572165 | 8.1:+11098274 | None:intergenic |
| ATCTAGGTTGGGATAGGTGA+AGG | 0.573177 | 8.1:-11102553 | MS.gene57998:intron |
| ACCATTGGAAGAGCGCTCAC+GGG | 0.573344 | 8.1:-11098454 | MS.gene57998:CDS |
| TTGTGGTTGGAGTACTGGTA+TGG | 0.578319 | 8.1:-11104565 | MS.gene57998:CDS |
| ATCTTGGCTAGCCAACCACC+AGG | 0.579375 | 8.1:+11107339 | None:intergenic |
| GAGTGGTACCGCCGTATGGT+TGG | 0.579776 | 8.1:-11093919 | MS.gene57998:CDS |
| ACAAATATTGAAGCCAGAGG+TGG | 0.581518 | 8.1:+11095157 | None:intergenic |
| AGGGTAACATGACACAATCA+TGG | 0.582958 | 8.1:-11097361 | MS.gene57998:CDS |
| TGATTGTGTCATGTTACCCT+GGG | 0.586232 | 8.1:+11097364 | None:intergenic |
| ATGATTTACGCTCATTTCTG+TGG | 0.594835 | 8.1:-11097055 | MS.gene57998:CDS |
| TTACCGCCTTGGGAGATGGT+CGG | 0.598126 | 8.1:-11094471 | MS.gene57998:CDS |
| TTAAAATGTAGGATGTACCA+TGG | 0.598761 | 8.1:-11097111 | MS.gene57998:intron |
| ATGAACTTTGAAGGTTTACA+GGG | 0.603493 | 8.1:-11098096 | MS.gene57998:intron |
| GGGCTAAACCACCTGTGAGA+AGG | 0.603879 | 8.1:+11094448 | None:intergenic |
| TGGTTGTCCACAGCTGCCCA+GGG | 0.606304 | 8.1:-11097380 | MS.gene57998:intron |
| TGATGCCTCTCATACCGTAG+TGG | 0.608644 | 8.1:+11095081 | None:intergenic |
| TGACAAGGCAAAGCTTGAGA+GGG | 0.610913 | 8.1:+11094428 | None:intergenic |
| GCTCATTTCTGTGGTAGCTG+GGG | 0.612327 | 8.1:-11097046 | MS.gene57998:CDS |
| AGAAGGCCGACCATCTCCCA+AGG | 0.612906 | 8.1:+11094465 | None:intergenic |
| ATGGTCGGCCTTCTCACAGG+TGG | 0.619069 | 8.1:-11094456 | MS.gene57998:CDS |
| ATCAAGAAGATAGCCAGTGA+GGG | 0.621203 | 8.1:+11094083 | None:intergenic |
| CTAGTAACTAGTACCTGACA+AGG | 0.625836 | 8.1:+11094413 | None:intergenic |
| AAAAGGAGTTGAAACCACTA+CGG | 0.628472 | 8.1:-11095095 | MS.gene57998:intron |
| ACAGGTTACCTAAAATATGT+GGG | 0.630984 | 8.1:+11096998 | None:intergenic |
| TGGAGTACTGGTATGGTCAG+TGG | 0.633505 | 8.1:-11104558 | MS.gene57998:CDS |
| TGCCCGGCTTAATATTGACA+AGG | 0.635172 | 8.1:-11104502 | MS.gene57998:CDS |
| GCTGGCAAATACCAACCATA+CGG | 0.640701 | 8.1:+11093908 | None:intergenic |
| CCAAGACTTTGGATGAGAGG+AGG | 0.644779 | 8.1:+11098277 | None:intergenic |
| GATGGAACTCATCAACAGCA+GGG | 0.659408 | 8.1:-11107407 | MS.gene57998:CDS |
| GCATTGAGTCAATTGCCTGG+TGG | 0.664198 | 8.1:-11107354 | MS.gene57998:CDS |
| GGCAAATACCAACCATACGG+CGG | 0.678484 | 8.1:+11093911 | None:intergenic |
| TATCAAGAAGATAGCCAGTG+AGG | 0.680953 | 8.1:+11094082 | None:intergenic |
| GTCACAAATATTGAAGCCAG+AGG | 0.686266 | 8.1:+11095154 | None:intergenic |
| AGGCCGACCATCTCCCAAGG+CGG | 0.734921 | 8.1:+11094468 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 11093660 | 11107472 | 11093660 | ID=MS.gene57998 |
| chr8.1 | mRNA | 11093660 | 11107472 | 11093660 | ID=MS.gene57998.t1;Parent=MS.gene57998 |
| chr8.1 | exon | 11107327 | 11107472 | 11107327 | ID=MS.gene57998.t1.exon1;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11107327 | 11107472 | 11107327 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11104496 | 11104595 | 11104496 | ID=MS.gene57998.t1.exon2;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11104496 | 11104595 | 11104496 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11102517 | 11102569 | 11102517 | ID=MS.gene57998.t1.exon3;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11102517 | 11102569 | 11102517 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11098408 | 11098482 | 11098408 | ID=MS.gene57998.t1.exon4;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11098408 | 11098482 | 11098408 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11098232 | 11098312 | 11098232 | ID=MS.gene57998.t1.exon5;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11098232 | 11098312 | 11098232 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11098044 | 11098105 | 11098044 | ID=MS.gene57998.t1.exon6;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11098044 | 11098105 | 11098044 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11097325 | 11097389 | 11097325 | ID=MS.gene57998.t1.exon7;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11097325 | 11097389 | 11097325 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11097007 | 11097122 | 11097007 | ID=MS.gene57998.t1.exon8;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11097007 | 11097122 | 11097007 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11096090 | 11096126 | 11096090 | ID=MS.gene57998.t1.exon9;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11096090 | 11096126 | 11096090 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11095096 | 11095191 | 11095096 | ID=MS.gene57998.t1.exon10;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11095096 | 11095191 | 11095096 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11094427 | 11094568 | 11094427 | ID=MS.gene57998.t1.exon11;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11094427 | 11094568 | 11094427 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11094252 | 11094304 | 11094252 | ID=MS.gene57998.t1.exon12;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11094252 | 11094304 | 11094252 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11094065 | 11094151 | 11094065 | ID=MS.gene57998.t1.exon13;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11094065 | 11094151 | 11094065 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11093907 | 11093976 | 11093907 | ID=MS.gene57998.t1.exon14;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11093907 | 11093976 | 11093907 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| chr8.1 | exon | 11093660 | 11093676 | 11093660 | ID=MS.gene57998.t1.exon15;Parent=MS.gene57998.t1 |
| chr8.1 | CDS | 11093660 | 11093676 | 11093660 | ID=cds.MS.gene57998.t1;Parent=MS.gene57998.t1 |
| Gene Sequence |
| Protein sequence |
