Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70304.t1 | XP_003630122.2 | 98.1 | 464 | 8 | 1 | 2 | 464 | 66 | 529 | 1.50E-257 | 898.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70304.t1 | G7LBB8 | 98.1 | 464 | 8 | 1 | 2 | 464 | 66 | 529 | 1.1e-257 | 898.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene70304 | 0.850863 | 1.29E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene70304 | 0.844469 | 7.42E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene70304 | 0.846657 | 1.89E-59 | -1.69E-46 |
| MS.gene049369 | MS.gene70304 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene049389 | MS.gene70304 | 0.823914 | 1.07E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene70304 | 0.824225 | 9.06E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene70304 | 0.865094 | 7.57E-65 | -1.69E-46 |
| MS.gene049661 | MS.gene70304 | 0.847063 | 1.47E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene70304 | 0.84474 | 6.27E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene70304 | 0.864657 | 1.04E-64 | -1.69E-46 |
| MS.gene049760 | MS.gene70304 | 0.817133 | 3.86E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene70304 | 0.842229 | 2.94E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene70304 | 0.827155 | 1.83E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene70304 | 0.841799 | 3.82E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene70304 | 0.892074 | 2.22E-74 | -1.69E-46 |
| MS.gene050397 | MS.gene70304 | 0.830188 | 3.38E-55 | -1.69E-46 |
| MS.gene050404 | MS.gene70304 | 0.828833 | 7.22E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene70304 | 0.82896 | 6.72E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene70304 | 0.851806 | 6.98E-61 | -1.69E-46 |
| MS.gene050464 | MS.gene70304 | 0.827372 | 1.62E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene70304 | 0.88142 | 2.44E-70 | -1.69E-46 |
| MS.gene050670 | MS.gene70304 | 0.856703 | 2.69E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene70304 | 0.826442 | 2.71E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene70304 | 0.828661 | 7.94E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene70304 | 0.864015 | 1.65E-64 | -1.69E-46 |
| MS.gene05101 | MS.gene70304 | 0.858325 | 8.90E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene70304 | 0.846495 | 2.10E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene70304 | 0.871521 | 6.42E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene70304 | 0.813672 | 2.27E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene70304 | 0.81177 | 5.93E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene70304 | 0.826857 | 2.16E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene70304 | 0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene051877 | MS.gene70304 | 0.830516 | 2.81E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene70304 | 0.804235 | 2.38E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene70304 | 0.906827 | 9.78E-81 | -1.69E-46 |
| MS.gene052178 | MS.gene70304 | 0.844987 | 5.38E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene70304 | 0.915823 | 3.72E-85 | -1.69E-46 |
| MS.gene052253 | MS.gene70304 | 0.855731 | 5.18E-62 | -1.69E-46 |
| MS.gene052287 | MS.gene70304 | 0.800366 | 1.49E-48 | -1.69E-46 |
| MS.gene052290 | MS.gene70304 | 0.827581 | 1.45E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene70304 | 0.887635 | 1.20E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene70304 | 0.804532 | 2.07E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene70304 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene05233 | MS.gene70304 | -0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene70304 | 0.892615 | 1.35E-74 | -1.69E-46 |
| MS.gene052421 | MS.gene70304 | 0.80252 | 5.40E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene70304 | 0.829386 | 5.30E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene70304 | 0.836866 | 7.28E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene70304 | 0.883135 | 5.79E-71 | -1.69E-46 |
| MS.gene053009 | MS.gene70304 | 0.810711 | 1.01E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene70304 | 0.852229 | 5.29E-61 | -1.69E-46 |
| MS.gene053104 | MS.gene70304 | 0.817188 | 3.75E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene70304 | 0.855595 | 5.68E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene70304 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene70304 | 0.869018 | 4.24E-66 | -1.69E-46 |
| MS.gene053559 | MS.gene70304 | 0.822535 | 2.25E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene70304 | 0.870076 | 1.92E-66 | -1.69E-46 |
| MS.gene053907 | MS.gene70304 | 0.801666 | 8.09E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene70304 | 0.800682 | 1.29E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene70304 | 0.85744 | 1.63E-62 | -1.69E-46 |
| MS.gene054349 | MS.gene70304 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene70304 | 0.825449 | 4.66E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene70304 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene70304 | 0.810365 | 1.20E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene70304 | 0.810462 | 1.14E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene70304 | 0.814283 | 1.67E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene70304 | 0.81182 | 5.78E-51 | -1.69E-46 |
| MS.gene054955 | MS.gene70304 | 0.837647 | 4.60E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene70304 | 0.804955 | 1.68E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene70304 | 0.863944 | 1.73E-64 | -1.69E-46 |
| MS.gene055254 | MS.gene70304 | 0.83151 | 1.60E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene70304 | 0.852545 | 4.30E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene70304 | 0.852756 | 3.75E-61 | -1.69E-46 |
| MS.gene055397 | MS.gene70304 | 0.820274 | 7.48E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene70304 | 0.829109 | 6.19E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene70304 | 0.883782 | 3.35E-71 | -1.69E-46 |
| MS.gene055428 | MS.gene70304 | 0.860082 | 2.65E-63 | -1.69E-46 |
| MS.gene055499 | MS.gene70304 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene70304 | 0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene70304 | 0.820053 | 8.40E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene70304 | 0.801939 | 7.11E-49 | -1.69E-46 |
| MS.gene055896 | MS.gene70304 | 0.806357 | 8.56E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene70304 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene05602 | MS.gene70304 | 0.811102 | 8.28E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene70304 | 0.83533 | 1.79E-56 | -1.69E-46 |
| MS.gene056314 | MS.gene70304 | 0.820072 | 8.32E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene70304 | 0.846977 | 1.55E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene70304 | 0.835754 | 1.40E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene70304 | 0.815127 | 1.08E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene70304 | 0.879085 | 1.66E-69 | -1.69E-46 |
| MS.gene056612 | MS.gene70304 | 0.84799 | 8.15E-60 | -1.69E-46 |
| MS.gene056659 | MS.gene70304 | 0.852254 | 5.21E-61 | -1.69E-46 |
| MS.gene056719 | MS.gene70304 | 0.844982 | 5.39E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene70304 | 0.815027 | 1.14E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene70304 | 0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene70304 | -0.814333 | 1.62E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene70304 | 0.812469 | 4.17E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene70304 | 0.842075 | 3.23E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene70304 | 0.824395 | 8.26E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene70304 | 0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene70304 | 0.818602 | 1.80E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene70304 | 0.842382 | 2.68E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene70304 | 0.843447 | 1.39E-58 | -1.69E-46 |
| MS.gene057295 | MS.gene70304 | 0.834486 | 2.92E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene70304 | 0.824481 | 7.89E-54 | -1.69E-46 |
| MS.gene05735 | MS.gene70304 | 0.823738 | 1.18E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene70304 | 0.858956 | 5.77E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene70304 | 0.854306 | 1.34E-61 | -1.69E-46 |
| MS.gene057450 | MS.gene70304 | 0.867508 | 1.30E-65 | -1.69E-46 |
| MS.gene057537 | MS.gene70304 | 0.815452 | 9.18E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene70304 | 0.825054 | 5.78E-54 | -1.69E-46 |
| MS.gene057796 | MS.gene70304 | 0.808232 | 3.43E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene70304 | 0.833936 | 4.01E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene70304 | 0.888627 | 4.99E-73 | -1.69E-46 |
| MS.gene058082 | MS.gene70304 | 0.878257 | 3.25E-69 | -1.69E-46 |
| MS.gene05811 | MS.gene70304 | 0.880599 | 4.81E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene70304 | 0.84008 | 1.08E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene70304 | 0.825807 | 3.83E-54 | -1.69E-46 |
| MS.gene058276 | MS.gene70304 | 0.837278 | 5.71E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene70304 | 0.883726 | 3.52E-71 | -1.69E-46 |
| MS.gene058365 | MS.gene70304 | 0.868115 | 8.30E-66 | -1.69E-46 |
| MS.gene058660 | MS.gene70304 | 0.892378 | 1.68E-74 | -1.69E-46 |
| MS.gene058710 | MS.gene70304 | 0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene058748 | MS.gene70304 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene70304 | 0.85546 | 6.22E-62 | -1.69E-46 |
| MS.gene058845 | MS.gene70304 | 0.828993 | 6.60E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene70304 | 0.801613 | 8.29E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene70304 | 0.865637 | 5.11E-65 | -1.69E-46 |
| MS.gene058993 | MS.gene70304 | 0.828288 | 9.77E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene70304 | 0.873695 | 1.20E-67 | -1.69E-46 |
| MS.gene059285 | MS.gene70304 | 0.84469 | 6.47E-59 | -1.69E-46 |
| MS.gene059294 | MS.gene70304 | 0.815531 | 8.82E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene70304 | 0.816605 | 5.07E-52 | -1.69E-46 |
| MS.gene059342 | MS.gene70304 | 0.8398 | 1.28E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene70304 | 0.841122 | 5.75E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene70304 | 0.817984 | 2.48E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene70304 | 0.869606 | 2.73E-66 | -1.69E-46 |
| MS.gene059536 | MS.gene70304 | 0.82594 | 3.56E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene70304 | 0.904183 | 1.60E-79 | -1.69E-46 |
| MS.gene05959 | MS.gene70304 | 0.850406 | 1.73E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene70304 | 0.881787 | 1.80E-70 | -1.69E-46 |
| MS.gene059688 | MS.gene70304 | 0.88735 | 1.54E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene70304 | 0.904865 | 7.85E-80 | -1.69E-46 |
| MS.gene059695 | MS.gene70304 | 0.902488 | 9.21E-79 | -1.69E-46 |
| MS.gene059708 | MS.gene70304 | 0.86383 | 1.88E-64 | -1.69E-46 |
| MS.gene059711 | MS.gene70304 | 0.805914 | 1.06E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene70304 | 0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene70304 | 0.874821 | 5.01E-68 | -1.69E-46 |
| MS.gene05986 | MS.gene70304 | 0.820481 | 6.70E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene70304 | 0.878994 | 1.79E-69 | -1.69E-46 |
| MS.gene059899 | MS.gene70304 | 0.804207 | 2.41E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene70304 | 0.855555 | 5.83E-62 | -1.69E-46 |
| MS.gene059974 | MS.gene70304 | 0.821456 | 4.00E-53 | -1.69E-46 |
| MS.gene060005 | MS.gene70304 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene70304 | 0.845079 | 5.08E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene70304 | 0.816836 | 4.50E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene70304 | 0.865681 | 4.95E-65 | -1.69E-46 |
| MS.gene060804 | MS.gene70304 | 0.824567 | 7.52E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene70304 | 0.857656 | 1.41E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene70304 | 0.804377 | 2.22E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene70304 | 0.833961 | 3.95E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene70304 | 0.833358 | 5.59E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene70304 | 0.897526 | 1.29E-76 | -1.69E-46 |
| MS.gene061051 | MS.gene70304 | -0.854795 | 9.70E-62 | -1.69E-46 |
| MS.gene061112 | MS.gene70304 | 0.808901 | 2.47E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene70304 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene70304 | 0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene70304 | 0.833788 | 4.36E-56 | -1.69E-46 |
| MS.gene061265 | MS.gene70304 | 0.808195 | 3.49E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70304.t1 | MTR_8g092050 | 98.060 | 464 | 8 | 1 | 2 | 464 | 66 | 529 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70304.t1 | AT2G21860 | 69.214 | 458 | 122 | 3 | 3 | 456 | 69 | 511 | 0.0 | 683 |
Find 100 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATTTGGATCATTAATT+TGG | 0.084716 | 4.1:+9376428 | None:intergenic |
| ATTCACACATTCATCCAATT+TGG | 0.214697 | 4.1:+9376415 | None:intergenic |
| CACTATTTCATATGAGTCTT+TGG | 0.227130 | 4.1:+9377395 | None:intergenic |
| CTAGATTTGAAGAACAAATT+AGG | 0.233092 | 4.1:-9377492 | MS.gene70304:CDS |
| TTGGTATGAACCGGTGTTTC+AGG | 0.234337 | 4.1:-9376833 | MS.gene70304:CDS |
| GAAGTAAAGGGAAGCATATT+TGG | 0.240241 | 4.1:-9377450 | MS.gene70304:CDS |
| CCCTCTCAACTCTGCTTCTT+GGG | 0.260895 | 4.1:-9379132 | MS.gene70304:CDS |
| GCCCTCTCAACTCTGCTTCT+TGG | 0.274661 | 4.1:-9379133 | MS.gene70304:CDS |
| TATTTCAGTGTATTAGATAA+TGG | 0.312534 | 4.1:-9376733 | MS.gene70304:CDS |
| TCATGCATTGATCCTCCATT+AGG | 0.313626 | 4.1:-9376484 | MS.gene70304:CDS |
| CAAACGAAGAGTCGGTTAAC+TGG | 0.314699 | 4.1:-9377566 | MS.gene70304:CDS |
| TCCAAATTAATGATCCAAAT+TGG | 0.322012 | 4.1:-9376429 | MS.gene70304:CDS |
| TTCGTCCTCTCTCTTTCATT+TGG | 0.322166 | 4.1:+9376571 | None:intergenic |
| TGGAGCTGGCGCGTTGTAGC+GGG | 0.328165 | 4.1:-9376928 | MS.gene70304:CDS |
| GAGTTATTTCAAATGAGTTT+TGG | 0.328583 | 4.1:-9376711 | MS.gene70304:CDS |
| GCTGCAGGGCAGTCTTATAC+TGG | 0.330058 | 4.1:-9376625 | MS.gene70304:CDS |
| TACTAATCAATGCTTATATA+AGG | 0.337300 | 4.1:-9377311 | MS.gene70304:CDS |
| TTCATACGAAAGTGCGAATC+TGG | 0.340979 | 4.1:-9377112 | MS.gene70304:CDS |
| TTCTCCTCCTCCATACCATT+TGG | 0.346423 | 4.1:+9376794 | None:intergenic |
| CATGCATTGATCCTCCATTA+GGG | 0.358125 | 4.1:-9376483 | MS.gene70304:CDS |
| TCAACCATTGGAGGCACATA+TGG | 0.360449 | 4.1:+9377021 | None:intergenic |
| TATGGAGGAGGAGAAAATAT+AGG | 0.367865 | 4.1:-9376786 | MS.gene70304:CDS |
| TCATTTGGATATGCTCCATC+TGG | 0.369299 | 4.1:+9376586 | None:intergenic |
| GACGCAGTTCTGACGATATA+CGG | 0.372251 | 4.1:-9377347 | MS.gene70304:CDS |
| GTTAAGAGAGGTAAGGTATA+TGG | 0.378832 | 4.1:-9376763 | MS.gene70304:CDS |
| GGAGGCACATATGGCTTAGT+AGG | 0.394962 | 4.1:+9377030 | None:intergenic |
| TGGGGTTTGTTCCACTATCA+TGG | 0.398219 | 4.1:-9376658 | MS.gene70304:CDS |
| ATGGAGGAGGAGAAAATATA+GGG | 0.404522 | 4.1:-9376785 | MS.gene70304:CDS |
| TGTAGCTAATGACCTTAGTT+GGG | 0.414877 | 4.1:-9376677 | MS.gene70304:CDS |
| TAATTACATACTTGATCAAC+AGG | 0.415438 | 4.1:+9377147 | None:intergenic |
| TCAGGTACTTAATTGCTTGT+TGG | 0.420248 | 4.1:-9377214 | MS.gene70304:CDS |
| TTCTATAGAGGAAAAGCAAA+AGG | 0.423876 | 4.1:-9376862 | MS.gene70304:CDS |
| ATTGCAGAAGATTTGTTTGT+TGG | 0.430954 | 4.1:-9376970 | MS.gene70304:CDS |
| GTTGAAGAACTGCGGTCGTC+AGG | 0.432171 | 4.1:-9377232 | MS.gene70304:CDS |
| GAGATTCACAATGAAGTAAA+GGG | 0.435424 | 4.1:-9377462 | MS.gene70304:CDS |
| GAACCCTCTGGAGTCCCTAA+TGG | 0.441951 | 4.1:+9376469 | None:intergenic |
| ATGGAGCTGGCGCGTTGTAG+CGG | 0.444125 | 4.1:-9376929 | MS.gene70304:CDS |
| ATGTAGCTAATGACCTTAGT+TGG | 0.456001 | 4.1:-9376678 | MS.gene70304:CDS |
| CATGGAGCTGCTAAAGCTGC+AGG | 0.462494 | 4.1:-9376640 | MS.gene70304:CDS |
| CAGCCTTCAGTAATTCTCTC+TGG | 0.462625 | 4.1:+9377613 | None:intergenic |
| CCTCCAATGGTTGAATTTCG+CGG | 0.464187 | 4.1:-9377012 | MS.gene70304:CDS |
| CTTTAGCAGCTCCATGATAG+TGG | 0.464240 | 4.1:+9376647 | None:intergenic |
| TGAGATTCACAATGAAGTAA+AGG | 0.466183 | 4.1:-9377463 | MS.gene70304:CDS |
| TGCCCGCGAAATTCAACCAT+TGG | 0.472472 | 4.1:+9377009 | None:intergenic |
| CTGTAACACGCAAAGCGAAA+AGG | 0.472645 | 4.1:+9377086 | None:intergenic |
| CTCCAATGGTTGAATTTCGC+GGG | 0.485968 | 4.1:-9377011 | MS.gene70304:CDS |
| CTGCAGGGCAGTCTTATACT+GGG | 0.487163 | 4.1:-9376624 | MS.gene70304:CDS |
| GAATGAAAACTTGAACCCTC+TGG | 0.494780 | 4.1:+9376457 | None:intergenic |
| CATTTGAAGGCCAAATGGTA+TGG | 0.506239 | 4.1:-9376804 | MS.gene70304:CDS |
| CCCAAGAAGCAGAGTTGAGA+GGG | 0.506484 | 4.1:+9379132 | None:intergenic |
| AGAAATGTGAAATCAAAGAG+TGG | 0.510895 | 4.1:-9376531 | MS.gene70304:CDS |
| GCAGTACTTGTTAGTCCAGA+TGG | 0.511090 | 4.1:-9376601 | MS.gene70304:CDS |
| CAGAAGATTTGTTTGTTGGT+TGG | 0.512517 | 4.1:-9376966 | MS.gene70304:CDS |
| CAAGGGAATTGATCATATGC+TGG | 0.512768 | 4.1:+9376898 | None:intergenic |
| AGATTGAAATGGGTTGATGA+AGG | 0.515244 | 4.1:-9377687 | MS.gene70304:CDS |
| CAATATCAGCTATTCTATAG+AGG | 0.515759 | 4.1:-9376874 | MS.gene70304:CDS |
| TAGAGAGTTTGCAATGGAGC+TGG | 0.516155 | 4.1:-9376942 | MS.gene70304:CDS |
| CAGAGAGAATTACTGAAGGC+TGG | 0.524861 | 4.1:-9377612 | MS.gene70304:CDS |
| TGCAAACTGTAACCGAAGCA+TGG | 0.534436 | 4.1:-9377374 | MS.gene70304:CDS |
| AGTGGAACAAACCCCAACTA+AGG | 0.536966 | 4.1:+9376665 | None:intergenic |
| TTCAGTAATTCTCTCTGGAG+TGG | 0.537115 | 4.1:+9377618 | None:intergenic |
| AGAAAATATAGGGTTAAGAG+AGG | 0.541135 | 4.1:-9376775 | MS.gene70304:CDS |
| GTGAGGATGGTGGCTATAGT+TGG | 0.542421 | 4.1:-9379170 | MS.gene70304:CDS |
| TTTCGTATGAAGCGATGCAT+CGG | 0.549436 | 4.1:+9377124 | None:intergenic |
| ATATAGGGTTAAGAGAGGTA+AGG | 0.560870 | 4.1:-9376770 | MS.gene70304:CDS |
| TCTATAGAGGAAAAGCAAAA+GGG | 0.562818 | 4.1:-9376861 | MS.gene70304:CDS |
| GATTGAAATGGGTTGATGAA+GGG | 0.563961 | 4.1:-9377686 | MS.gene70304:CDS |
| GTAGCTAATGACCTTAGTTG+GGG | 0.568269 | 4.1:-9376676 | MS.gene70304:CDS |
| GGATGAGCCTCCGGTGAGGA+TGG | 0.570432 | 4.1:-9379183 | MS.gene70304:CDS |
| TGCAGGGCAGTCTTATACTG+GGG | 0.572559 | 4.1:-9376623 | MS.gene70304:CDS |
| ACTGCGTCGATCCCATGCTT+CGG | 0.573705 | 4.1:+9377362 | None:intergenic |
| GGAGCTGGCGCGTTGTAGCG+GGG | 0.580346 | 4.1:-9376927 | MS.gene70304:CDS |
| GAAATGTGAAATCAAAGAGT+GGG | 0.580566 | 4.1:-9376530 | MS.gene70304:CDS |
| TGTGACGATGGATGAGCCTC+CGG | 0.581185 | 4.1:-9379192 | None:intergenic |
| ATGGTGGCTATAGTTGGCCA+TGG | 0.581673 | 4.1:-9379164 | MS.gene70304:CDS |
| CGCTGTTACAAACGAAGAGT+CGG | 0.585099 | 4.1:-9377574 | MS.gene70304:CDS |
| CCGCGAAATTCAACCATTGG+AGG | 0.586866 | 4.1:+9377012 | None:intergenic |
| GCAAACTGTAACCGAAGCAT+GGG | 0.587392 | 4.1:-9377373 | MS.gene70304:CDS |
| ATGGAGCTGCTAAAGCTGCA+GGG | 0.587852 | 4.1:-9376639 | MS.gene70304:CDS |
| GAGGCACATATGGCTTAGTA+GGG | 0.597220 | 4.1:+9377031 | None:intergenic |
| AAGGCCAAATGGTATGGAGG+AGG | 0.599053 | 4.1:-9376798 | MS.gene70304:CDS |
| TAAGCCATATGTGCCTCCAA+TGG | 0.599741 | 4.1:-9377025 | MS.gene70304:CDS |
| ACTATAGCCACCATCCTCAC+CGG | 0.601762 | 4.1:+9379173 | None:intergenic |
| TCCCAAGAAGCAGAGTTGAG+AGG | 0.610361 | 4.1:+9379131 | None:intergenic |
| AACTGTATGTTGAAGAACTG+CGG | 0.613073 | 4.1:-9377240 | MS.gene70304:CDS |
| TGAGAGGGCTGACAGCTCCA+TGG | 0.617554 | 4.1:+9379147 | None:intergenic |
| GATTTGAAGAACAAATTAGG+AGG | 0.621101 | 4.1:-9377489 | MS.gene70304:CDS |
| CCCTCTGGAGTCCCTAATGG+AGG | 0.622618 | 4.1:+9376472 | None:intergenic |
| GTTGGTTAGAGAGTTTGCAA+TGG | 0.622715 | 4.1:-9376948 | MS.gene70304:CDS |
| TGAGCCTCCGGTGAGGATGG+TGG | 0.634453 | 4.1:-9379180 | MS.gene70304:CDS |
| ATTAGATTGAATGCACTCGT+CGG | 0.634851 | 4.1:+9377644 | None:intergenic |
| TTGAAGGCCAAATGGTATGG+AGG | 0.635847 | 4.1:-9376801 | MS.gene70304:CDS |
| CATATCCAAATGAAAGAGAG+AGG | 0.645957 | 4.1:-9376576 | MS.gene70304:CDS |
| AGAATAGCTGATATTGACAA+GGG | 0.651578 | 4.1:+9376881 | None:intergenic |
| CCTCCATTAGGGACTCCAGA+GGG | 0.662863 | 4.1:-9376472 | MS.gene70304:CDS |
| TAGAATAGCTGATATTGACA+AGG | 0.664980 | 4.1:+9376880 | None:intergenic |
| TCCTCCATTAGGGACTCCAG+AGG | 0.675079 | 4.1:-9376473 | MS.gene70304:CDS |
| CGATGGATGAGCCTCCGGTG+AGG | 0.688939 | 4.1:-9379187 | MS.gene70304:CDS |
| ACTCCAGAGAGAATTACTGA+AGG | 0.689331 | 4.1:-9377616 | MS.gene70304:CDS |
| ATAGCCACCATCCTCACCGG+AGG | 0.702930 | 4.1:+9379176 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAAAGAAATATGT+GGG | + | chr4.1:9377421-9377440 | None:intergenic | 10.0% |
| !! | ATTTCAATATAAAAATAGCT+TGG | + | chr4.1:9376622-9376641 | None:intergenic | 15.0% |
| !! | GATTAAATAAAAGAAATATG+TGG | + | chr4.1:9377422-9377441 | None:intergenic | 15.0% |
| !! | TTATATCCTTATATAAAAAC+AGG | + | chr4.1:9376565-9376584 | None:intergenic | 15.0% |
| !! | TTATGATATAGTAGTTAATT+AGG | + | chr4.1:9377374-9377393 | None:intergenic | 15.0% |
| !!! | GATCTTTTTTCTTTATTTAT+AGG | - | chr4.1:9377313-9377332 | MS.gene70304:CDS | 15.0% |
| !!! | TTATTTTATTTATCCAAACA+GGG | + | chr4.1:9376695-9376714 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTTATCCAAAC+AGG | + | chr4.1:9376696-9376715 | None:intergenic | 15.0% |
| !! | AAGCATATTTGGAAAAATAT+TGG | - | chr4.1:9378163-9378182 | MS.gene70304:intron | 20.0% |
| !! | ACAACTTATATGAAAACATT+TGG | + | chr4.1:9376721-9376740 | None:intergenic | 20.0% |
| !! | ACTCAATAAAGTTATACATA+AGG | - | chr4.1:9376884-9376903 | MS.gene70304:CDS | 20.0% |
| !! | AGCATATTTGGAAAAATATT+GGG | - | chr4.1:9378164-9378183 | MS.gene70304:intron | 20.0% |
| !! | ATATAGTAGTTAATTAGGTT+GGG | + | chr4.1:9377369-9377388 | None:intergenic | 20.0% |
| !! | GTATAACTTTATTGAGTTTA+CGG | + | chr4.1:9376881-9376900 | None:intergenic | 20.0% |
| !! | TACTAATCAATGCTTATATA+AGG | - | chr4.1:9378291-9378310 | MS.gene70304:intron | 20.0% |
| !! | TATAACTTTATTGAGTTTAC+GGG | + | chr4.1:9376880-9376899 | None:intergenic | 20.0% |
| !! | TATTTCAGTGTATTAGATAA+TGG | - | chr4.1:9378869-9378888 | MS.gene70304:intron | 20.0% |
| !!! | CTATAACCTGTTTTTATATA+AGG | - | chr4.1:9376556-9376575 | MS.gene70304:CDS | 20.0% |
| !!! | TTATTTCTTTCAAATTTGCT+TGG | - | chr4.1:9377475-9377494 | MS.gene70304:CDS | 20.0% |
| !!! | TTGACTATTTTCTTACTTAT+GGG | - | chr4.1:9377592-9377611 | MS.gene70304:CDS | 20.0% |
| !!! | TTTGACTATTTTCTTACTTA+TGG | - | chr4.1:9377591-9377610 | MS.gene70304:CDS | 20.0% |
| ! | ACATGAAACTCATTTGAATT+TGG | + | chr4.1:9376914-9376933 | None:intergenic | 25.0% |
| ! | AGTTAATTCTCAAATCTTTG+AGG | + | chr4.1:9377205-9377224 | None:intergenic | 25.0% |
| ! | ATTTAATGTTCCCTTTAATC+AGG | - | chr4.1:9377887-9377906 | MS.gene70304:intron | 25.0% |
| ! | CTAGATTTGAAGAACAAATT+AGG | - | chr4.1:9378110-9378129 | MS.gene70304:intron | 25.0% |
| ! | GAAAAATAATTGTCTTGAGT+TGG | - | chr4.1:9378538-9378557 | MS.gene70304:intron | 25.0% |
| ! | GATATAGTAGTTAATTAGGT+TGG | + | chr4.1:9377370-9377389 | None:intergenic | 25.0% |
| ! | GCATATTTGGAAAAATATTG+GGG | - | chr4.1:9378165-9378184 | MS.gene70304:intron | 25.0% |
| ! | GTTGTAAAGCTATCATTTAA+AGG | - | chr4.1:9377745-9377764 | MS.gene70304:intron | 25.0% |
| ! | TAATTACATACTTGATCAAC+AGG | + | chr4.1:9378458-9378477 | None:intergenic | 25.0% |
| ! | TCCAAATTAATGATCCAAAT+TGG | - | chr4.1:9379173-9379192 | MS.gene70304:CDS | 25.0% |
| ! | TCCAATTTGGATCATTAATT+TGG | + | chr4.1:9379177-9379196 | None:intergenic | 25.0% |
| ! | TGATTAAAGGGAACATTAAA+TGG | + | chr4.1:9377888-9377907 | None:intergenic | 25.0% |
| ! | TTACATACTTTAGCAAATCA+TGG | - | chr4.1:9377090-9377109 | MS.gene70304:CDS | 25.0% |
| !! | AAATTTATTGTAGTTTGTGG+TGG | - | chr4.1:9376995-9377014 | MS.gene70304:CDS | 25.0% |
| !! | AATCTTTTTGCCTGATTAAA+GGG | + | chr4.1:9377900-9377919 | None:intergenic | 25.0% |
| !! | TTTCAGGTAAAAACATTTGA+AGG | - | chr4.1:9378785-9378804 | MS.gene70304:intron | 25.0% |
| !!! | AACAAGTTGAAATTAGCTTT+TGG | + | chr4.1:9377728-9377747 | None:intergenic | 25.0% |
| !!! | AATGATTTTACTGGCTAAAA+CGG | + | chr4.1:9377397-9377416 | None:intergenic | 25.0% |
| !!! | GAGTTATTTCAAATGAGTTT+TGG | - | chr4.1:9378891-9378910 | MS.gene70304:intron | 25.0% |
| !!! | TTTAAGTTCTAAAGTGCTAA+TGG | - | chr4.1:9377665-9377684 | MS.gene70304:CDS | 25.0% |
| AAAAACATTTGAAGGCCAAA+TGG | - | chr4.1:9378793-9378812 | MS.gene70304:intron | 30.0% | |
| AACATATGCATATAGTGAGA+TGG | - | chr4.1:9376971-9376990 | MS.gene70304:CDS | 30.0% | |
| ACATATGCATATAGTGAGAT+GGG | - | chr4.1:9376972-9376991 | MS.gene70304:CDS | 30.0% | |
| AGAAAATATAGGGTTAAGAG+AGG | - | chr4.1:9378827-9378846 | MS.gene70304:intron | 30.0% | |
| AGAAATGTGAAATCAAAGAG+TGG | - | chr4.1:9379071-9379090 | MS.gene70304:intron | 30.0% | |
| AGAATAGCTGATATTGACAA+GGG | + | chr4.1:9378724-9378743 | None:intergenic | 30.0% | |
| AGTAAGCTGAAAACAACTTA+TGG | - | chr4.1:9376778-9376797 | MS.gene70304:CDS | 30.0% | |
| ATCAGGCAAAAAGATTGAAA+TGG | - | chr4.1:9377904-9377923 | MS.gene70304:intron | 30.0% | |
| ATTGAAAAACTTGAGAGCAA+AGG | - | chr4.1:9378325-9378344 | MS.gene70304:intron | 30.0% | |
| ATTGAGAAGCTTATCCAAAA+AGG | - | chr4.1:9377821-9377840 | MS.gene70304:intron | 30.0% | |
| CAATATCAGCTATTCTATAG+AGG | - | chr4.1:9378728-9378747 | MS.gene70304:intron | 30.0% | |
| CACTATTTCATATGAGTCTT+TGG | + | chr4.1:9378210-9378229 | None:intergenic | 30.0% | |
| GAAATGTGAAATCAAAGAGT+GGG | - | chr4.1:9379072-9379091 | MS.gene70304:intron | 30.0% | |
| GAAGGCAATAATATAATGTG+CGG | - | chr4.1:9377028-9377047 | MS.gene70304:CDS | 30.0% | |
| GAGATGTTTATTAACGTAGA+AGG | - | chr4.1:9377291-9377310 | MS.gene70304:CDS | 30.0% | |
| GAGATTCACAATGAAGTAAA+GGG | - | chr4.1:9378140-9378159 | MS.gene70304:intron | 30.0% | |
| GATTTGAAGAACAAATTAGG+AGG | - | chr4.1:9378113-9378132 | MS.gene70304:intron | 30.0% | |
| GGGAAATTTATTGTAGTTTG+TGG | - | chr4.1:9376992-9377011 | MS.gene70304:CDS | 30.0% | |
| TAGAATAGCTGATATTGACA+AGG | + | chr4.1:9378725-9378744 | None:intergenic | 30.0% | |
| TCAGGCAAAAAGATTGAAAT+GGG | - | chr4.1:9377905-9377924 | MS.gene70304:intron | 30.0% | |
| TCCAAAAAGGTTCATACTAA+CGG | - | chr4.1:9377834-9377853 | MS.gene70304:intron | 30.0% | |
| TCTACGTTAATAAACATCTC+TGG | + | chr4.1:9377291-9377310 | None:intergenic | 30.0% | |
| TCTATAGAGGAAAAGCAAAA+GGG | - | chr4.1:9378741-9378760 | MS.gene70304:intron | 30.0% | |
| TGAGATTCACAATGAAGTAA+AGG | - | chr4.1:9378139-9378158 | MS.gene70304:intron | 30.0% | |
| TTCTATAGAGGAAAAGCAAA+AGG | - | chr4.1:9378740-9378759 | MS.gene70304:intron | 30.0% | |
| TTGAAAAACTTGAGAGCAAA+GGG | - | chr4.1:9378326-9378345 | MS.gene70304:intron | 30.0% | |
| TTGGAATAGCATGATTCATA+AGG | - | chr4.1:9377119-9377138 | MS.gene70304:CDS | 30.0% | |
| ! | ATTGCAGAAGATTTGTTTGT+TGG | - | chr4.1:9378632-9378651 | MS.gene70304:intron | 30.0% |
| ! | CAATCTTTTTGCCTGATTAA+AGG | + | chr4.1:9377901-9377920 | None:intergenic | 30.0% |
| ! | TATGTGGGTAATGATTTTAC+TGG | + | chr4.1:9377406-9377425 | None:intergenic | 30.0% |
| ! | TGAAGAGCTTTTCTACAATT+AGG | + | chr4.1:9378416-9378435 | None:intergenic | 30.0% |
| !! | AAGTTTTTCAATACTGGAAC+TGG | + | chr4.1:9378317-9378336 | None:intergenic | 30.0% |
| !! | AATGTTTTTACCTGAAACAC+CGG | + | chr4.1:9378782-9378801 | None:intergenic | 30.0% |
| !! | GTCATAATAGTTTTGCTAGA+GGG | - | chr4.1:9377563-9377582 | MS.gene70304:CDS | 30.0% |
| !! | TGTCATAATAGTTTTGCTAG+AGG | - | chr4.1:9377562-9377581 | MS.gene70304:CDS | 30.0% |
| !!! | AAATGAGTTTTGGACAATTG+TGG | - | chr4.1:9378901-9378920 | MS.gene70304:intron | 30.0% |
| !!! | GTCTTTGGTTTTATCTAACT+CGG | + | chr4.1:9378195-9378214 | None:intergenic | 30.0% |
| AAAATCCAAAGACATGTTGC+AGG | + | chr4.1:9377262-9377281 | None:intergenic | 35.0% | |
| AACTGTATGTTGAAGAACTG+CGG | - | chr4.1:9378362-9378381 | MS.gene70304:intron | 35.0% | |
| ATATAGGGTTAAGAGAGGTA+AGG | - | chr4.1:9378832-9378851 | MS.gene70304:intron | 35.0% | |
| ATGGAGGAGGAGAAAATATA+GGG | - | chr4.1:9378817-9378836 | MS.gene70304:intron | 35.0% | |
| ATGTAGCTAATGACCTTAGT+TGG | - | chr4.1:9378924-9378943 | MS.gene70304:intron | 35.0% | |
| ATTAGATTGAATGCACTCGT+CGG | + | chr4.1:9377961-9377980 | None:intergenic | 35.0% | |
| CATATCCAAATGAAAGAGAG+AGG | - | chr4.1:9379026-9379045 | MS.gene70304:intron | 35.0% | |
| CATGATTCATAAGGAAACAC+AGG | - | chr4.1:9377128-9377147 | MS.gene70304:CDS | 35.0% | |
| GCGGATATAACAGTAAAATC+TGG | - | chr4.1:9377047-9377066 | MS.gene70304:CDS | 35.0% | |
| GTTAAGAGAGGTAAGGTATA+TGG | - | chr4.1:9378839-9378858 | MS.gene70304:intron | 35.0% | |
| TATGGAGGAGGAGAAAATAT+AGG | - | chr4.1:9378816-9378835 | MS.gene70304:intron | 35.0% | |
| TCAGGTACTTAATTGCTTGT+TGG | - | chr4.1:9378388-9378407 | MS.gene70304:intron | 35.0% | |
| TGTAGCTAATGACCTTAGTT+GGG | - | chr4.1:9378925-9378944 | MS.gene70304:intron | 35.0% | |
| ! | CAGAAGATTTGTTTGTTGGT+TGG | - | chr4.1:9378636-9378655 | MS.gene70304:intron | 35.0% |
| ! | GAAAAGCAAAAGGGTCTTTT+TGG | - | chr4.1:9378750-9378769 | MS.gene70304:intron | 35.0% |
| ! | GAAGTAAAGGGAAGCATATT+TGG | - | chr4.1:9378152-9378171 | MS.gene70304:intron | 35.0% |
| ! | TAGCAAATCATGGATTGTGT+TGG | - | chr4.1:9377100-9377119 | MS.gene70304:CDS | 35.0% |
| ! | TCCGTTAGTATGAACCTTTT+TGG | + | chr4.1:9377838-9377857 | None:intergenic | 35.0% |
| ! | TTGAGTTTACGGGTATGTTT+TGG | + | chr4.1:9376870-9376889 | None:intergenic | 35.0% |
| !! | AGATTGAAATGGGTTGATGA+AGG | - | chr4.1:9377915-9377934 | MS.gene70304:intron | 35.0% |
| !! | GATTGAAATGGGTTGATGAA+GGG | - | chr4.1:9377916-9377935 | MS.gene70304:intron | 35.0% |
| !! | GCTCTCAAGTTTTTCAATAC+TGG | + | chr4.1:9378323-9378342 | None:intergenic | 35.0% |
| !! | GTAATCCAAGAGTGCTATTT+AGG | - | chr4.1:9376943-9376962 | MS.gene70304:CDS | 35.0% |
| ACTCCAGAGAGAATTACTGA+AGG | - | chr4.1:9377986-9378005 | MS.gene70304:intron | 40.0% | |
| ACTCTCCTAAATAGCACTCT+TGG | + | chr4.1:9376951-9376970 | None:intergenic | 40.0% | |
| CAAGGGAATTGATCATATGC+TGG | + | chr4.1:9378707-9378726 | None:intergenic | 40.0% | |
| CATTTGAAGGCCAAATGGTA+TGG | - | chr4.1:9378798-9378817 | MS.gene70304:intron | 40.0% | |
| GAATGAAAACTTGAACCCTC+TGG | + | chr4.1:9379148-9379167 | None:intergenic | 40.0% | |
| GTAGCTAATGACCTTAGTTG+GGG | - | chr4.1:9378926-9378945 | MS.gene70304:intron | 40.0% | |
| GTTGGTTAGAGAGTTTGCAA+TGG | - | chr4.1:9378654-9378673 | MS.gene70304:intron | 40.0% | |
| TCATTTGGATATGCTCCATC+TGG | + | chr4.1:9379019-9379038 | None:intergenic | 40.0% | |
| TCTATACTGTAGACCCTGTT+TGG | - | chr4.1:9376679-9376698 | MS.gene70304:CDS | 40.0% | |
| TTCGTCCTCTCTCTTTCATT+TGG | + | chr4.1:9379034-9379053 | None:intergenic | 40.0% | |
| TTTCGTATGAAGCGATGCAT+CGG | + | chr4.1:9378481-9378500 | None:intergenic | 40.0% | |
| ! | CATGCATTGATCCTCCATTA+GGG | - | chr4.1:9379119-9379138 | MS.gene70304:CDS | 40.0% |
| ! | TCATGCATTGATCCTCCATT+AGG | - | chr4.1:9379118-9379137 | MS.gene70304:CDS | 40.0% |
| ! | TTCAGTAATTCTCTCTGGAG+TGG | + | chr4.1:9377987-9378006 | None:intergenic | 40.0% |
| ! | TTCATACGAAAGTGCGAATC+TGG | - | chr4.1:9378490-9378509 | MS.gene70304:intron | 40.0% |
| !! | AGGGTCTTTTTGGTATGAAC+CGG | - | chr4.1:9378760-9378779 | MS.gene70304:intron | 40.0% |
| AGTGGAACAAACCCCAACTA+AGG | + | chr4.1:9378940-9378959 | None:intergenic | 45.0% | |
| CAAACGAAGAGTCGGTTAAC+TGG | - | chr4.1:9378036-9378055 | MS.gene70304:intron | 45.0% | |
| CAGAGAGAATTACTGAAGGC+TGG | - | chr4.1:9377990-9378009 | MS.gene70304:intron | 45.0% | |
| CAGCCTTCAGTAATTCTCTC+TGG | + | chr4.1:9377992-9378011 | None:intergenic | 45.0% | |
| CCTCCAATGGTTGAATTTCG+CGG | - | chr4.1:9378590-9378609 | MS.gene70304:intron | 45.0% | |
| CGCTGTTACAAACGAAGAGT+CGG | - | chr4.1:9378028-9378047 | MS.gene70304:intron | 45.0% | |
| CTCCAATGGTTGAATTTCGC+GGG | - | chr4.1:9378591-9378610 | MS.gene70304:intron | 45.0% | |
| CTGTAACACGCAAAGCGAAA+AGG | + | chr4.1:9378519-9378538 | None:intergenic | 45.0% | |
| CTTTAGCAGCTCCATGATAG+TGG | + | chr4.1:9378958-9378977 | None:intergenic | 45.0% | |
| GAGGCACATATGGCTTAGTA+GGG | + | chr4.1:9378574-9378593 | None:intergenic | 45.0% | |
| GCAAACTGTAACCGAAGCAT+GGG | - | chr4.1:9378229-9378248 | MS.gene70304:intron | 45.0% | |
| TAAGCCATATGTGCCTCCAA+TGG | - | chr4.1:9378577-9378596 | MS.gene70304:intron | 45.0% | |
| TAGAGAGTTTGCAATGGAGC+TGG | - | chr4.1:9378660-9378679 | MS.gene70304:intron | 45.0% | |
| TGCAAACTGTAACCGAAGCA+TGG | - | chr4.1:9378228-9378247 | MS.gene70304:intron | 45.0% | |
| TGCAACCTGCAACATGTCTT+TGG | - | chr4.1:9377254-9377273 | MS.gene70304:CDS | 45.0% | |
| TTCTCCTCCTCCATACCATT+TGG | + | chr4.1:9378811-9378830 | None:intergenic | 45.0% | |
| TTGAAGGCCAAATGGTATGG+AGG | - | chr4.1:9378801-9378820 | MS.gene70304:intron | 45.0% | |
| TTGGTATGAACCGGTGTTTC+AGG | - | chr4.1:9378769-9378788 | MS.gene70304:intron | 45.0% | |
| ! | AATTTGCTTGGACAGCATGC+AGG | - | chr4.1:9377487-9377506 | MS.gene70304:CDS | 45.0% |
| ! | GACGCAGTTCTGACGATATA+CGG | - | chr4.1:9378255-9378274 | MS.gene70304:intron | 45.0% |
| ! | GCAGTACTTGTTAGTCCAGA+TGG | - | chr4.1:9379001-9379020 | MS.gene70304:intron | 45.0% |
| ! | TCAACCATTGGAGGCACATA+TGG | + | chr4.1:9378584-9378603 | None:intergenic | 45.0% |
| ! | TGGGGTTTGTTCCACTATCA+TGG | - | chr4.1:9378944-9378963 | MS.gene70304:intron | 45.0% |
| ! | TGTGGTGGAGAAGAAAGAGA+AGG | - | chr4.1:9377010-9377029 | MS.gene70304:CDS | 45.0% |
| AAGGCCAAATGGTATGGAGG+AGG | - | chr4.1:9378804-9378823 | MS.gene70304:intron | 50.0% | |
| ACTATAGCCACCATCCTCAC+CGG | + | chr4.1:9376432-9376451 | None:intergenic | 50.0% | |
| ATGGAGCTGCTAAAGCTGCA+GGG | - | chr4.1:9378963-9378982 | MS.gene70304:intron | 50.0% | |
| ATGGTGGCTATAGTTGGCCA+TGG | - | chr4.1:9376438-9376457 | MS.gene70304:CDS | 50.0% | |
| CCCAAGAAGCAGAGTTGAGA+GGG | + | chr4.1:9376473-9376492 | None:intergenic | 50.0% | |
| CCCTCTCAACTCTGCTTCTT+GGG | - | chr4.1:9376470-9376489 | MS.gene70304:CDS | 50.0% | |
| CCGCGAAATTCAACCATTGG+AGG | + | chr4.1:9378593-9378612 | None:intergenic | 50.0% | |
| TCCCAAGAAGCAGAGTTGAG+AGG | + | chr4.1:9376474-9376493 | None:intergenic | 50.0% | |
| TGCCCGCGAAATTCAACCAT+TGG | + | chr4.1:9378596-9378615 | None:intergenic | 50.0% | |
| ! | CTGCAGGGCAGTCTTATACT+GGG | - | chr4.1:9378978-9378997 | MS.gene70304:intron | 50.0% |
| ! | GGAGGCACATATGGCTTAGT+AGG | + | chr4.1:9378575-9378594 | None:intergenic | 50.0% |
| ! | GTGAGGATGGTGGCTATAGT+TGG | - | chr4.1:9376432-9376451 | MS.gene70304:CDS | 50.0% |
| ! | TGCAGGGCAGTCTTATACTG+GGG | - | chr4.1:9378979-9378998 | MS.gene70304:intron | 50.0% |
| CATGGAGCTGCTAAAGCTGC+AGG | - | chr4.1:9378962-9378981 | MS.gene70304:intron | 55.0% | |
| CCTCCATTAGGGACTCCAGA+GGG | - | chr4.1:9379130-9379149 | MS.gene70304:CDS | 55.0% | |
| GCCCTCTCAACTCTGCTTCT+TGG | - | chr4.1:9376469-9376488 | MS.gene70304:CDS | 55.0% | |
| GTTGAAGAACTGCGGTCGTC+AGG | - | chr4.1:9378370-9378389 | MS.gene70304:intron | 55.0% | |
| TCCTCCATTAGGGACTCCAG+AGG | - | chr4.1:9379129-9379148 | MS.gene70304:CDS | 55.0% | |
| ! | ACTGCGTCGATCCCATGCTT+CGG | + | chr4.1:9378243-9378262 | None:intergenic | 55.0% |
| ! | GCTGCAGGGCAGTCTTATAC+TGG | - | chr4.1:9378977-9378996 | MS.gene70304:intron | 55.0% |
| !! | GAACCCTCTGGAGTCCCTAA+TGG | + | chr4.1:9379136-9379155 | None:intergenic | 55.0% |
| ATAGCCACCATCCTCACCGG+AGG | + | chr4.1:9376429-9376448 | None:intergenic | 60.0% | |
| ATGGAGCTGGCGCGTTGTAG+CGG | - | chr4.1:9378673-9378692 | MS.gene70304:intron | 60.0% | |
| TGAGAGGGCTGACAGCTCCA+TGG | + | chr4.1:9376458-9376477 | None:intergenic | 60.0% | |
| !! | CCCTCTGGAGTCCCTAATGG+AGG | + | chr4.1:9379133-9379152 | None:intergenic | 60.0% |
| GGATGAGCCTCCGGTGAGGA+TGG | - | chr4.1:9376419-9376438 | MS.gene70304:CDS | 65.0% | |
| TGAGCCTCCGGTGAGGATGG+TGG | - | chr4.1:9376422-9376441 | MS.gene70304:CDS | 65.0% | |
| TGGAGCTGGCGCGTTGTAGC+GGG | - | chr4.1:9378674-9378693 | MS.gene70304:intron | 65.0% | |
| GGAGCTGGCGCGTTGTAGCG+GGG | - | chr4.1:9378675-9378694 | MS.gene70304:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9376417 | 9379207 | 9376417 | ID=MS.gene70304 |
| chr4.1 | mRNA | 9376417 | 9379207 | 9376417 | ID=MS.gene70304.t1;Parent=MS.gene70304 |
| chr4.1 | exon | 9379112 | 9379207 | 9379112 | ID=MS.gene70304.t1.exon1;Parent=MS.gene70304.t1 |
| chr4.1 | CDS | 9379112 | 9379207 | 9379112 | ID=cds.MS.gene70304.t1;Parent=MS.gene70304.t1 |
| chr4.1 | exon | 9376417 | 9377715 | 9376417 | ID=MS.gene70304.t1.exon2;Parent=MS.gene70304.t1 |
| chr4.1 | CDS | 9376417 | 9377715 | 9376417 | ID=cds.MS.gene70304.t1;Parent=MS.gene70304.t1 |
| Gene Sequence |
| Protein sequence |
