AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91832


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91832.t1 MTR_3g033620 93.350 391 25 1 3 392 1 391 0.0 649
MS.gene91832.t1 MTR_0013s0150 76.125 289 67 1 105 391 92 380 7.06e-163 462
MS.gene91832.t1 MTR_4g077000 64.643 280 97 1 111 388 109 388 2.93e-132 384
MS.gene91832.t1 MTR_3g071970 35.836 293 173 5 108 388 427 716 8.22e-51 182
MS.gene91832.t1 MTR_2g084605 27.208 283 193 5 115 388 114 392 6.46e-30 119
MS.gene91832.t1 MTR_7g064130 29.553 291 184 8 113 388 164 448 1.13e-25 108
MS.gene91832.t1 MTR_7g074090 29.310 232 149 5 160 389 90 308 2.51e-23 99.8
MS.gene91832.t1 MTR_7g074090 30.603 232 146 6 160 389 90 308 1.06e-22 98.6
MS.gene91832.t1 MTR_7g074090 30.603 232 146 6 160 389 108 326 2.17e-22 98.2
MS.gene91832.t1 MTR_7g074070 29.870 231 147 5 160 388 101 318 9.16e-21 92.8
MS.gene91832.t1 MTR_2g081000 24.786 234 163 3 115 341 181 408 3.99e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91832.t1 AT5G12470 63.668 289 103 1 103 389 96 384 3.77e-136 394
MS.gene91832.t1 AT3G56140 36.364 297 174 5 108 392 200 493 3.63e-54 187
MS.gene91832.t1 AT2G40400 37.037 297 172 5 108 392 410 703 4.79e-53 188
MS.gene91832.t1 AT2G40400 37.037 297 172 5 108 392 410 703 4.79e-53 188
MS.gene91832.t1 AT3G56140 36.364 297 174 5 108 392 419 712 9.76e-53 187
MS.gene91832.t1 AT3G56140 36.364 297 174 5 108 392 419 712 9.76e-53 187
MS.gene91832.t1 AT2G40400 36.626 243 140 4 108 338 410 650 1.42e-38 147
MS.gene91832.t1 AT5G22790 27.875 287 187 7 115 388 154 433 2.91e-27 112
MS.gene91832.t1 AT2G37860 28.881 277 174 8 126 388 165 432 5.28e-27 112
MS.gene91832.t1 AT2G37860 28.881 277 174 8 126 388 165 432 5.28e-27 112
MS.gene91832.t1 AT3G08640 29.741 232 146 5 164 391 107 325 2.45e-23 100
MS.gene91832.t1 AT3G08630 28.936 235 144 6 164 391 104 322 1.36e-22 97.8
MS.gene91832.t1 AT2G37860 27.128 188 123 4 126 304 165 347 8.86e-14 72.4
MS.gene91832.t1 AT2G37860 27.128 188 123 4 126 304 165 347 8.86e-14 72.4
MS.gene91832.t1 AT5G24690 25.833 240 153 6 115 341 180 407 1.02e-12 70.1

Find 113 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAAAATTTGGAGGGTTTA+AGG 0.142353 3.2:-22652635 MS.gene91832:CDS
TCAGAACTGCTAATACTTAT+TGG 0.156499 3.2:-22649417 MS.gene91832:CDS
TTCAGATGGTTGTTAAAATT+TGG 0.178114 3.2:-22652646 MS.gene91832:CDS
AATTATTGAGCAACGGATTC+TGG 0.230169 3.2:-22649491 MS.gene91832:CDS
GTTAAGGCGGGGCGGGTTCC+TGG 0.231023 3.2:-22652712 MS.gene91832:CDS
AGGACATCCATAGAAGAATT+TGG 0.239459 3.2:+22651085 None:intergenic
CAGAACTGCTAATACTTATT+GGG 0.244345 3.2:-22649416 MS.gene91832:CDS
GGGAGTGGAGGTGGTGGTGG+AGG 0.254142 3.2:-22652853 MS.gene91832:CDS
GTTATTGCCAAATTCTTCTA+TGG 0.267390 3.2:-22651092 MS.gene91832:CDS
GGAGAGATTTCCGGCGGATT+TGG 0.270043 3.2:-22652743 MS.gene91832:CDS
TTGCTTAAGCCTTTATCTTC+TGG 0.287578 3.2:+22649260 None:intergenic
GGAAATGGAGGCGGGTTTCC+AGG 0.296038 3.2:-22652874 MS.gene91832:CDS
AGAAGAGGCAATGCTGGTTT+TGG 0.304142 3.2:-22652785 MS.gene91832:CDS
GTTACTTTATCTTAGGTAAC+AGG 0.304911 3.2:-22651194 MS.gene91832:intron
CATCTCTTATGCAGCGTAAC+GGG 0.313556 3.2:-22650754 MS.gene91832:intron
GGAGGGGACGACGGTGGAGG+TGG 0.319532 3.2:-22652835 MS.gene91832:CDS
ATGGCTACAGTGGTAGAAAT+TGG 0.319898 3.2:+22653041 None:intergenic
GTTCTTAACTAAGCTTGTTA+TGG 0.322891 3.2:-22652590 MS.gene91832:CDS
AAATGATTTGGCATGAAAAT+AGG 0.325107 3.2:+22652931 None:intergenic
TAGGTAACAGGCATTGTAAC+AGG 0.333404 3.2:-22651182 MS.gene91832:CDS
CAAAACAAACTTATACTAAC+TGG 0.335708 3.2:-22649454 MS.gene91832:CDS
CGACGGTGGAGGTGGGGAAG+AGG 0.344446 3.2:-22652827 MS.gene91832:CDS
GCATTGCCTCTTCTCTATTT+CGG 0.353456 3.2:+22652794 None:intergenic
GGATTTGGCTGTTGCTGTTA+AGG 0.361357 3.2:-22652728 MS.gene91832:CDS
GCTACACTGGTTGAGATTAC+AGG 0.377802 3.2:+22650244 None:intergenic
CCAGGGAGTGGAGGTGGTGG+TGG 0.383497 3.2:-22652856 MS.gene91832:CDS
GGAGAATGAAGCAAATGATT+TGG 0.388629 3.2:+22652919 None:intergenic
GGAGTGGAGGTGGTGGTGGA+GGG 0.398739 3.2:-22652852 MS.gene91832:CDS
AAATCATTTGCTTCATTCTC+CGG 0.399692 3.2:-22652917 MS.gene91832:CDS
ACGTCTTCCTCAGCTGGAAA+TGG 0.400051 3.2:-22652889 MS.gene91832:CDS
ATCTCAACCAGTGTAGCATA+TGG 0.402251 3.2:-22650238 MS.gene91832:CDS
GGGTTTCCAGGGAGTGGAGG+TGG 0.402523 3.2:-22652862 MS.gene91832:CDS
TGTTGCTGTTAAGGCGGGGC+GGG 0.402815 3.2:-22652719 MS.gene91832:CDS
GAGGTGGGGAAGAGGAAGAA+AGG 0.408212 3.2:-22652819 MS.gene91832:CDS
TTGGCTGTTGCTGTTAAGGC+GGG 0.411375 3.2:-22652724 MS.gene91832:CDS
GTTTCCACGTCTTCCTCAGC+TGG 0.423746 3.2:-22652895 MS.gene91832:CDS
TTTCCAGGGAGTGGAGGTGG+TGG 0.425609 3.2:-22652859 MS.gene91832:CDS
TCTCAACAGGTGGCTTTGGC+AGG 0.431996 3.2:-22650879 MS.gene91832:intron
TAGGTCGATGGAGAGATTTC+CGG 0.435176 3.2:-22652752 MS.gene91832:CDS
GGTGGAGGGGACGACGGTGG+AGG 0.436244 3.2:-22652838 MS.gene91832:CDS
GAGTGGAGGTGGTGGTGGAG+GGG 0.437741 3.2:-22652851 MS.gene91832:CDS
GGCGGGTTTCCAGGGAGTGG+AGG 0.439477 3.2:-22652865 MS.gene91832:CDS
AGGGGACGACGGTGGAGGTG+GGG 0.442749 3.2:-22652833 MS.gene91832:CDS
ATAACTCCAGCACTAATTGC+AGG 0.445469 3.2:+22651110 None:intergenic
TCCTCAGCTGGAAATGGAGG+CGG 0.448506 3.2:-22652883 MS.gene91832:CDS
AGGGTTTAAGGAAAGGTTGT+TGG 0.448786 3.2:-22652623 MS.gene91832:CDS
AGAAAATTTCACAAAGGAGA+TGG 0.457962 3.2:-22651944 MS.gene91832:CDS
GAACAAGTGTGTTGAAATGT+TGG 0.464025 3.2:+22653086 None:intergenic
GGTGGTGGAGGGGACGACGG+TGG 0.467989 3.2:-22652841 MS.gene91832:CDS
AGAAGAATGTAGAAACTTCA+TGG 0.468874 3.2:+22652986 None:intergenic
ACAAAGAATAGGTGCTATAG+TGG 0.469138 3.2:-22650838 MS.gene91832:intron
GGCAGAAGAATGATTGAGCT+TGG 0.469499 3.2:+22652960 None:intergenic
AGTTGGAACCGGTGCTTCAC+TGG 0.470168 3.2:-22650717 MS.gene91832:intron
AGCCTTCTGTGCATTGATCA+AGG 0.477024 3.2:+22650297 None:intergenic
GCTGAGGAAGACGTGGAAAC+CGG 0.484794 3.2:+22652898 None:intergenic
CCACCACCACCTCCACTCCC+TGG 0.485227 3.2:+22652856 None:intergenic
CCTCCTCCTGCAATTAGTGC+TGG 0.488703 3.2:-22651116 MS.gene91832:CDS
TACTCAAATGGCTATGGCTA+TGG 0.488749 3.2:-22653118 None:intergenic
TATACACTTCTACAAAGAAT+AGG 0.490986 3.2:-22650849 MS.gene91832:CDS
GGGGCAAAGCTGTTCGTAGT+TGG 0.495711 3.2:-22650734 MS.gene91832:CDS
GAGGGGACGACGGTGGAGGT+GGG 0.499909 3.2:-22652834 MS.gene91832:CDS
GGTTGGAGTCCAGAAGATAA+AGG 0.501111 3.2:-22649269 MS.gene91832:CDS
GGAGGCGGGTTTCCAGGGAG+TGG 0.502191 3.2:-22652868 MS.gene91832:CDS
GAATGTAGAAACTTCATGGC+GGG 0.502281 3.2:+22652990 None:intergenic
AAGCTGTTCGTAGTTGGAAC+CGG 0.502348 3.2:-22650728 MS.gene91832:CDS
CCTCAGCTGGAAATGGAGGC+GGG 0.507161 3.2:-22652882 MS.gene91832:CDS
AGATGGTTGTTAAAATTTGG+AGG 0.512940 3.2:-22652643 MS.gene91832:CDS
GGCTGAGGCTGGTAGGTCGA+TGG 0.513465 3.2:-22652764 MS.gene91832:CDS
TTAAGAGAAACAGTGGGAGC+AGG 0.517008 3.2:+22651140 None:intergenic
GAAATGGAGGCGGGTTTCCA+GGG 0.520597 3.2:-22652873 MS.gene91832:CDS
AAATAGAGAAGAGGCAATGC+TGG 0.527965 3.2:-22652791 MS.gene91832:CDS
GATGGTTGTTAAAATTTGGA+GGG 0.533288 3.2:-22652642 MS.gene91832:CDS
TTTGGCTGTTGCTGTTAAGG+CGG 0.535226 3.2:-22652725 MS.gene91832:CDS
CGTGTATACCAGTGAAGCAC+CGG 0.536823 3.2:+22650709 None:intergenic
AATTTGGAGGGTTTAAGGAA+AGG 0.537593 3.2:-22652630 MS.gene91832:CDS
ATCAGGTATCAAGTACTAGC+AGG 0.538106 3.2:-22649514 MS.gene91832:intron
TCTCAATACTCAAATGGCTA+TGG 0.538146 3.2:-22653124 None:intergenic
TCTCAACCAGTGTAGCATAT+GGG 0.543058 3.2:-22650237 MS.gene91832:CDS
TGGTAGTAGTTAGCAACCTC+AGG 0.544386 3.2:-22650207 MS.gene91832:intron
GGGTTCCTGGTTCGATAGTG+AGG 0.546193 3.2:-22652699 MS.gene91832:CDS
TGTAGCTTGGTAAAGAAGAA+TGG 0.548341 3.2:+22653022 None:intergenic
GGTGGTGGTGGAGGGGACGA+CGG 0.554039 3.2:-22652844 MS.gene91832:CDS
GTAAATCCCATATGCTACAC+TGG 0.555578 3.2:+22650231 None:intergenic
TATATGTTTGAGTAGGTGGG+TGG 0.565043 3.2:-22649305 MS.gene91832:intron
AGGTGGGGAAGAGGAAGAAA+GGG 0.577699 3.2:-22652818 MS.gene91832:CDS
CCATCTCTTATGCAGCGTAA+CGG 0.578736 3.2:-22650755 MS.gene91832:intron
CCAGCACTAATTGCAGGAGG+AGG 0.581260 3.2:+22651116 None:intergenic
CTGTTGCTGTTAAGGCGGGG+CGG 0.583576 3.2:-22652720 MS.gene91832:CDS
CCCGCCTCCATTTCCAGCTG+AGG 0.587884 3.2:+22652882 None:intergenic
AGAACTGCTAATACTTATTG+GGG 0.588913 3.2:-22649415 MS.gene91832:CDS
AGGAGGTTTAAGAGAAACAG+TGG 0.589294 3.2:+22651133 None:intergenic
AACCTCCTCACTATCGAACC+AGG 0.592357 3.2:+22652694 None:intergenic
TAGCAGGAATTATTGAGCAA+CGG 0.592464 3.2:-22649498 MS.gene91832:CDS
ATCTCTTATGCAGCGTAACG+GGG 0.596886 3.2:-22650753 MS.gene91832:intron
TCTTCCTCAGCTGGAAATGG+AGG 0.600023 3.2:-22652886 MS.gene91832:CDS
TGCCTTGATCAATGCACAGA+AGG 0.602798 3.2:-22650299 MS.gene91832:CDS
TTCCTGGTTCGATAGTGAGG+AGG 0.603087 3.2:-22652696 MS.gene91832:CDS
ACAGCAACAGCCAAATCCGC+CGG 0.617065 3.2:+22652733 None:intergenic
AAGGGACCGAAATAGAGAAG+AGG 0.624727 3.2:-22652800 MS.gene91832:CDS
AATGTAGAAACTTCATGGCG+GGG 0.626602 3.2:+22652991 None:intergenic
TGGCATGAAAATAGGTGCAG+AGG 0.627627 3.2:+22652939 None:intergenic
GTGTGTTGAAATGTTGGAGA+AGG 0.628543 3.2:+22653092 None:intergenic
GTAAAGAAGAATGGCTACAG+TGG 0.628594 3.2:+22653031 None:intergenic
TGTTGTTGTCATCTTCACCA+AGG 0.629999 3.2:-22652563 MS.gene91832:intron
CGGGGTGTGATGATGTAGCT+TGG 0.634020 3.2:+22653009 None:intergenic
TGTAGCATATGGGATTTACA+TGG 0.636490 3.2:-22650227 MS.gene91832:CDS
ATTTCCAGCTGAGGAAGACG+TGG 0.640083 3.2:+22652891 None:intergenic
TGGCTGTTGCTGTTAAGGCG+GGG 0.645154 3.2:-22652723 MS.gene91832:CDS
GCGAAAAGAAAATTTCACAA+AGG 0.660036 3.2:-22651950 MS.gene91832:CDS
GGAGGTTTAAGAGAAACAGT+GGG 0.664978 3.2:+22651134 None:intergenic
GTCGATGGAGAGATTTCCGG+CGG 0.669889 3.2:-22652749 MS.gene91832:CDS
ACTCCAGCACTAATTGCAGG+AGG 0.697400 3.2:+22651113 None:intergenic
AGAATGTAGAAACTTCATGG+CGG 0.732790 3.2:+22652989 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATATTAAGATTGTTTT+CGG - chr3.2:22650290-22650309 MS.gene91832:CDS 10.0%
!!! GATTTAGAATTAATTTTTTT+TGG - chr3.2:22652489-22652508 MS.gene91832:intron 10.0%
!!! GATTTTTTATTTTTCATTTA+AGG - chr3.2:22652825-22652844 MS.gene91832:CDS 10.0%
!!! TAATATTTTTAAGCAAATAA+TGG + chr3.2:22650280-22650299 None:intergenic 10.0%
!! AATACACTAAATTGTAATAA+TGG + chr3.2:22649845-22649864 None:intergenic 15.0%
!! TTATCTTTCGTTAATTAAAT+AGG + chr3.2:22651416-22651435 None:intergenic 15.0%
!! TTCTAAATCTATGTTATAAA+TGG + chr3.2:22652478-22652497 None:intergenic 15.0%
!!! TTTTTATACTGAATATGAAA+AGG + chr3.2:22651360-22651379 None:intergenic 15.0%
!! AAAAATCAAATATTTACCTC+AGG + chr3.2:22652812-22652831 None:intergenic 20.0%
!! AAAAGTTTGAAGAAACTAAA+AGG + chr3.2:22651717-22651736 None:intergenic 20.0%
!! AAAATTGCAATCAAAATCAA+TGG + chr3.2:22652522-22652541 None:intergenic 20.0%
!! CTATAATTGTAGATTATAGA+TGG - chr3.2:22651841-22651860 MS.gene91832:intron 20.0%
!! TAATCTACAATTATAGATGT+TGG + chr3.2:22651837-22651856 None:intergenic 20.0%
!! TGAAAAAGAATAAATGATGA+AGG + chr3.2:22651069-22651088 None:intergenic 20.0%
!! TTTATATCCTCAAATTATTG+TGG - chr3.2:22652737-22652756 MS.gene91832:CDS 20.0%
!!! AGAAGAACATAATAACTTTT+AGG + chr3.2:22653031-22653050 None:intergenic 20.0%
!!! ATAAGTTGTTTTAGAATATG+AGG - chr3.2:22649999-22650018 MS.gene91832:intron 20.0%
!!! CTCTATTTTACTTGTTTTTT+AGG + chr3.2:22649977-22649996 None:intergenic 20.0%
!!! TCAAATTGTTATTACTCATT+AGG - chr3.2:22650552-22650571 MS.gene91832:intron 20.0%
!!! TTCTCAAATTTTTTGTTTGA+CGG + chr3.2:22650499-22650518 None:intergenic 20.0%
!!! TTTATTTATCAACTGCATTT+TGG + chr3.2:22650808-22650827 None:intergenic 20.0%
! AAAGAATAAATGATGAAGGT+TGG + chr3.2:22651065-22651084 None:intergenic 25.0%
! AACAACTGATCATATATGTA+TGG + chr3.2:22651461-22651480 None:intergenic 25.0%
! AAGGAAATAACTATTTGAGT+TGG + chr3.2:22651583-22651602 None:intergenic 25.0%
! AAGTAACAAACTGAATAAGA+CGG + chr3.2:22651168-22651187 None:intergenic 25.0%
! AATTATAGACAAAGTACACA+AGG + chr3.2:22651943-22651962 None:intergenic 25.0%
! AGAAAATTAGCCATATGAAA+TGG - chr3.2:22650363-22650382 MS.gene91832:intron 25.0%
! CAAAACAAACTTATACTAAC+TGG - chr3.2:22652921-22652940 MS.gene91832:CDS 25.0%
! GATAAGATATCCATTTCATA+TGG + chr3.2:22650376-22650395 None:intergenic 25.0%
! TAAAGGTAACAAAAGGAATT+TGG + chr3.2:22650218-22650237 None:intergenic 25.0%
! TATACACTTCTACAAAGAAT+AGG - chr3.2:22651526-22651545 MS.gene91832:intron 25.0%
! TTCAGATGGTTGTTAAAATT+TGG - chr3.2:22649729-22649748 MS.gene91832:intron 25.0%
! TTGATTAATTACTAAGTGTC+TGG + chr3.2:22652229-22652248 None:intergenic 25.0%
! TTTGGTATATATGTTTGAGT+AGG - chr3.2:22653063-22653082 MS.gene91832:CDS 25.0%
!! AAATGATTTGGCATGAAAAT+AGG + chr3.2:22649447-22649466 None:intergenic 25.0%
!! AAGGATTTGTTTATATGATC+AGG - chr3.2:22652844-22652863 MS.gene91832:CDS 25.0%
!! AGTTATTTCCTTATAAGTGA+AGG - chr3.2:22651591-22651610 MS.gene91832:intron 25.0%
!! GTAATAATGGAAATAAACCT+TGG + chr3.2:22649832-22649851 None:intergenic 25.0%
!! GTTTGCTAAATATACATTTG+TGG - chr3.2:22650640-22650659 MS.gene91832:intron 25.0%
!! TAATTATTAATTTGACCGAC+TGG + chr3.2:22650725-22650744 None:intergenic 25.0%
!!! CGATGGATTTTTTCTATTTT+GGG + chr3.2:22652401-22652420 None:intergenic 25.0%
!!! GCAATATTTTTTATTCAGGT+TGG - chr3.2:22652038-22652057 MS.gene91832:intron 25.0%
!!! GCTTGCAATATTTTTTATTC+AGG - chr3.2:22652034-22652053 MS.gene91832:intron 25.0%
!!! TCAGTTTGTTACTTTATCTT+AGG - chr3.2:22651174-22651193 MS.gene91832:CDS 25.0%
!!! TCGATGGATTTTTTCTATTT+TGG + chr3.2:22652402-22652421 None:intergenic 25.0%
!!! TTAACTTGAAAAGCATTTTC+AGG + chr3.2:22651313-22651332 None:intergenic 25.0%
!!! TTTTTTATTCAGGTTGGTAT+AGG - chr3.2:22652044-22652063 MS.gene91832:intron 25.0%
AAAATCGCAATCAAAATCGA+TGG + chr3.2:22652418-22652437 None:intergenic 30.0%
AAATCATTTGCTTCATTCTC+CGG - chr3.2:22649458-22649477 MS.gene91832:CDS 30.0%
AATAGAACGATGGAAACTAA+TGG + chr3.2:22651798-22651817 None:intergenic 30.0%
ACTAACTCTGACACAAAAAT+TGG + chr3.2:22650118-22650137 None:intergenic 30.0%
AGAAAATTTCACAAAGGAGA+TGG - chr3.2:22650431-22650450 MS.gene91832:intron 30.0%
AGAACTGCTAATACTTATTG+GGG - chr3.2:22652960-22652979 MS.gene91832:CDS 30.0%
AGAAGAATGTAGAAACTTCA+TGG + chr3.2:22649392-22649411 None:intergenic 30.0%
AGATGGTTGTTAAAATTTGG+AGG - chr3.2:22649732-22649751 MS.gene91832:intron 30.0%
ATGCAAAAATGTACACTCTT+GGG - chr3.2:22650056-22650075 MS.gene91832:intron 30.0%
ATTCTCGTGCATGTATTATT+CGG - chr3.2:22652251-22652270 MS.gene91832:intron 30.0%
CAACTTGTAAAGGTAACAAA+AGG + chr3.2:22650225-22650244 None:intergenic 30.0%
CAGAACTGCTAATACTTATT+GGG - chr3.2:22652959-22652978 MS.gene91832:CDS 30.0%
CTGATCATATATGTATGGAT+CGG + chr3.2:22651456-22651475 None:intergenic 30.0%
GATGGTTGTTAAAATTTGGA+GGG - chr3.2:22649733-22649752 MS.gene91832:intron 30.0%
GCGAAAAGAAAATTTCACAA+AGG - chr3.2:22650425-22650444 MS.gene91832:intron 30.0%
GTATATATGTTTGAGTAGGT+GGG - chr3.2:22653067-22653086 MS.gene91832:CDS 30.0%
GTTAAAATTTGGAGGGTTTA+AGG - chr3.2:22649740-22649759 MS.gene91832:intron 30.0%
GTTATTGCCAAATTCTTCTA+TGG - chr3.2:22651283-22651302 MS.gene91832:intron 30.0%
TACTAGAATAGAACTTGCAT+TGG - chr3.2:22650029-22650048 MS.gene91832:intron 30.0%
TATGCAAAAATGTACACTCT+TGG - chr3.2:22650055-22650074 MS.gene91832:intron 30.0%
TCAGAACTGCTAATACTTAT+TGG - chr3.2:22652958-22652977 MS.gene91832:CDS 30.0%
TGGAAGGGAATAGAAAAATT+GGG + chr3.2:22652616-22652635 None:intergenic 30.0%
TTCACATGAAAATAGAACGA+TGG + chr3.2:22651808-22651827 None:intergenic 30.0%
TTGGAAGGGAATAGAAAAAT+TGG + chr3.2:22652617-22652636 None:intergenic 30.0%
! ATGTATTATTCGGACTTTTG+AGG - chr3.2:22652261-22652280 MS.gene91832:intron 30.0%
! CTTACACAGATGTTTTCATT+CGG - chr3.2:22652710-22652729 MS.gene91832:CDS 30.0%
! CTTTTGTTACCTTTACAAGT+TGG - chr3.2:22650223-22650242 MS.gene91832:CDS 30.0%
! GACTTTTGTAGAATCGATAT+AGG + chr3.2:22652552-22652571 None:intergenic 30.0%
! GTTACTTTATCTTAGGTAAC+AGG - chr3.2:22651181-22651200 MS.gene91832:CDS 30.0%
! TGAATTTTCGTTTTCTCAAC+AGG - chr3.2:22651483-22651502 MS.gene91832:intron 30.0%
! TGGATATCTTATCTGTTTTC+AGG - chr3.2:22650383-22650402 MS.gene91832:intron 30.0%
! TGGATTTGAGGATTTAAGTT+GGG + chr3.2:22652329-22652348 None:intergenic 30.0%
! TGTATTATTCGGACTTTTGA+GGG - chr3.2:22652262-22652281 MS.gene91832:intron 30.0%
! TTTATCAACTGCATTTTGGA+AGG + chr3.2:22650804-22650823 None:intergenic 30.0%
!! AGTAGTTTGTTGAAGGAAAA+TGG + chr3.2:22652198-22652217 None:intergenic 30.0%
!! ATTCTGTAGTAGTTTGTTGA+AGG + chr3.2:22652205-22652224 None:intergenic 30.0%
!! GTTCTTAACTAAGCTTGTTA+TGG - chr3.2:22649785-22649804 MS.gene91832:intron 30.0%
!! TAACAGGTTTTGTACTAGTT+TGG - chr3.2:22651209-22651228 MS.gene91832:intron 30.0%
!!! GTGTTTAGTATTTTAACCTG+AGG - chr3.2:22652793-22652812 MS.gene91832:CDS 30.0%
!!! TCTATTTTGGGATTCTTCTA+TGG + chr3.2:22652389-22652408 None:intergenic 30.0%
AAATGTACACTCTTGGGATT+AGG - chr3.2:22650062-22650081 MS.gene91832:intron 35.0%
AATTTGGAGGGTTTAAGGAA+AGG - chr3.2:22649745-22649764 MS.gene91832:intron 35.0%
ACGTCTTCAATATGAAGTGT+CGG + chr3.2:22652675-22652694 None:intergenic 35.0%
AGAACGTTGAATTCACCAAA+AGG + chr3.2:22651885-22651904 None:intergenic 35.0%
AGAATGTAGAAACTTCATGG+CGG + chr3.2:22649389-22649408 None:intergenic 35.0%
AGAGAGATTCCAACTTGTAA+AGG + chr3.2:22650235-22650254 None:intergenic 35.0%
AGGACATCCATAGAAGAATT+TGG + chr3.2:22651293-22651312 None:intergenic 35.0%
ATTCACCAAAAGGATATGCT+AGG + chr3.2:22651875-22651894 None:intergenic 35.0%
CAACTTAAATCCTCAAATCC+AGG - chr3.2:22652328-22652347 MS.gene91832:intron 35.0%
CCATACTAACAAAAGAGTGA+TGG - chr3.2:22650338-22650357 MS.gene91832:intron 35.0%
CTAAATTACATGCACCATAG+CGG + chr3.2:22650701-22650720 None:intergenic 35.0%
CTGGATTTGAGGATTTAAGT+TGG + chr3.2:22652330-22652349 None:intergenic 35.0%
GAACAAGTGTGTTGAAATGT+TGG + chr3.2:22649292-22649311 None:intergenic 35.0%
GGAGAATGAAGCAAATGATT+TGG + chr3.2:22649459-22649478 None:intergenic 35.0%
GGTATATATGTTTGAGTAGG+TGG - chr3.2:22653066-22653085 MS.gene91832:CDS 35.0%
TAGCAGGAATTATTGAGCAA+CGG - chr3.2:22652877-22652896 MS.gene91832:CDS 35.0%
TCAGCATGAAACTTGAATGT+TGG - chr3.2:22651963-22651982 MS.gene91832:CDS 35.0%
TCGACATCCACAATAATTTG+AGG + chr3.2:22652747-22652766 None:intergenic 35.0%
TCTTCTCAGTTCTCATGATT+TGG - chr3.2:22653045-22653064 MS.gene91832:CDS 35.0%
TGCGACATCAAGAAGATTAT+TGG + chr3.2:22651094-22651113 None:intergenic 35.0%
TGTAGCATATGGGATTTACA+TGG - chr3.2:22652148-22652167 MS.gene91832:intron 35.0%
TGTAGCTTGGTAAAGAAGAA+TGG + chr3.2:22649356-22649375 None:intergenic 35.0%
! AACTTCCTAGCATATCCTTT+TGG - chr3.2:22651867-22651886 MS.gene91832:intron 35.0%
! AATTATTGAGCAACGGATTC+TGG - chr3.2:22652884-22652903 MS.gene91832:CDS 35.0%
! ACAAAGAATAGGTGCTATAG+TGG - chr3.2:22651537-22651556 MS.gene91832:intron 35.0%
! ATCTTCTTGATGTCGCATTT+TGG - chr3.2:22651097-22651116 MS.gene91832:CDS 35.0%
! ATTTTCGTTTTCTCAACAGG+TGG - chr3.2:22651486-22651505 MS.gene91832:intron 35.0%
! CCATCACTCTTTTGTTAGTA+TGG + chr3.2:22650341-22650360 None:intergenic 35.0%
! GTATTATTCGGACTTTTGAG+GGG - chr3.2:22652263-22652282 MS.gene91832:intron 35.0%
! TCAGATATTGACTACTAGCT+TGG - chr3.2:22650160-22650179 MS.gene91832:intron 35.0%
!! AGTTGGGATTTTGACAACAA+TGG + chr3.2:22652313-22652332 None:intergenic 35.0%
!! TTAAGTGCTGACATACATTG+TGG - chr3.2:22650952-22650971 MS.gene91832:intron 35.0%
!!! AGTTTGTTTTGACGTAGCAA+TGG + chr3.2:22652912-22652931 None:intergenic 35.0%
!!! GGATTTTGTTGTTGCTAATG+TGG - chr3.2:22650452-22650471 MS.gene91832:intron 35.0%
!!! TTTTTTGCCTATGACTTTCC+AGG - chr3.2:22650521-22650540 MS.gene91832:intron 35.0%
AAATAGAGAAGAGGCAATGC+TGG - chr3.2:22649584-22649603 MS.gene91832:intron 40.0%
AACAATTTGAACCCTGATCC+TGG + chr3.2:22650542-22650561 None:intergenic 40.0%
AAGAGGGAAAATGATGCAGA+CGG + chr3.2:22650781-22650800 None:intergenic 40.0%
AAGTTGGAATCTCTCTCTAC+AGG - chr3.2:22650239-22650258 MS.gene91832:CDS 40.0%
AATGTAGAAACTTCATGGCG+GGG + chr3.2:22649387-22649406 None:intergenic 40.0%
ACAATCGAGAAAGTGGACAT+AGG - chr3.2:22651909-22651928 MS.gene91832:intron 40.0%
AGGAGGTTTAAGAGAAACAG+TGG + chr3.2:22651245-22651264 None:intergenic 40.0%
AGGGTTTAAGGAAAGGTTGT+TGG - chr3.2:22649752-22649771 MS.gene91832:intron 40.0%
ATAACTCCAGCACTAATTGC+AGG + chr3.2:22651268-22651287 None:intergenic 40.0%
ATCAGGTATCAAGTACTAGC+AGG - chr3.2:22652861-22652880 MS.gene91832:CDS 40.0%
ATCTCAACCAGTGTAGCATA+TGG - chr3.2:22652137-22652156 MS.gene91832:intron 40.0%
ATGGCTACAGTGGTAGAAAT+TGG + chr3.2:22649337-22649356 None:intergenic 40.0%
ATTGTGGCAAGGTTCTTAGT+TGG - chr3.2:22650968-22650987 MS.gene91832:intron 40.0%
ATTTACCGTGAAAGTTCAGC+GGG - chr3.2:22650755-22650774 MS.gene91832:intron 40.0%
CAATCGAGAAAGTGGACATA+GGG - chr3.2:22651910-22651929 MS.gene91832:intron 40.0%
CATTTACCGTGAAAGTTCAG+CGG - chr3.2:22650754-22650773 MS.gene91832:intron 40.0%
CGCTATGGTGCATGTAATTT+AGG - chr3.2:22650699-22650718 MS.gene91832:intron 40.0%
CTAATGGAGTTCCATATGCA+AGG + chr3.2:22651782-22651801 None:intergenic 40.0%
CTATGGATTTGAGTCGTTCA+AGG + chr3.2:22652372-22652391 None:intergenic 40.0%
GAAGGAAAATGGAATACCTG+AGG + chr3.2:22652187-22652206 None:intergenic 40.0%
GAATGTAGAAACTTCATGGC+GGG + chr3.2:22649388-22649407 None:intergenic 40.0%
GCACTCGTGTTAGAAATTCA+TGG + chr3.2:22652016-22652035 None:intergenic 40.0%
GCATTGCCTCTTCTCTATTT+CGG + chr3.2:22649584-22649603 None:intergenic 40.0%
GGAGATGACCTTCACTTATA+AGG + chr3.2:22651602-22651621 None:intergenic 40.0%
GGAGGTTTAAGAGAAACAGT+GGG + chr3.2:22651244-22651263 None:intergenic 40.0%
GTAAAGAAGAATGGCTACAG+TGG + chr3.2:22649347-22649366 None:intergenic 40.0%
GTAAATCCCATATGCTACAC+TGG + chr3.2:22652147-22652166 None:intergenic 40.0%
GTGTGTTGAAATGTTGGAGA+AGG + chr3.2:22649286-22649305 None:intergenic 40.0%
TATATGTTTGAGTAGGTGGG+TGG - chr3.2:22653070-22653089 MS.gene91832:CDS 40.0%
TCTCAACCAGTGTAGCATAT+GGG - chr3.2:22652138-22652157 MS.gene91832:intron 40.0%
TCTGCAAACAATCGAGAAAG+TGG - chr3.2:22651902-22651921 MS.gene91832:intron 40.0%
TGAAGAAAGTCGCAAAATCC+TGG + chr3.2:22652349-22652368 None:intergenic 40.0%
TGCATGTAATTTAGGCCAGT+CGG - chr3.2:22650707-22650726 MS.gene91832:intron 40.0%
TGTTGTTGTCATCTTCACCA+AGG - chr3.2:22649812-22649831 MS.gene91832:intron 40.0%
TTGGAACCTTTGATGAAGCT+TGG + chr3.2:22650199-22650218 None:intergenic 40.0%
! TAGGTAACAGGCATTGTAAC+AGG - chr3.2:22651193-22651212 MS.gene91832:intron 40.0%
! TCTCTGATTTTGCGAACTCT+TGG - chr3.2:22651755-22651774 MS.gene91832:intron 40.0%
!! AACTGCATTTTGGAAGGAAG+AGG + chr3.2:22650798-22650817 None:intergenic 40.0%
!! ACTGCATTTTGGAAGGAAGA+GGG + chr3.2:22650797-22650816 None:intergenic 40.0%
!! AGGAGTCAGTTGTTTTCAGA+TGG - chr3.2:22649715-22649734 MS.gene91832:intron 40.0%
!! ATTTTGACAACAATGGTCGG+TGG + chr3.2:22652306-22652325 None:intergenic 40.0%
!! GACTTTACTTCAGGTTGGAA+GGG + chr3.2:22652631-22652650 None:intergenic 40.0%
!! GGGATTTTGACAACAATGGT+CGG + chr3.2:22652309-22652328 None:intergenic 40.0%
!!! AGTGAGGAGGTTTTTTGAGT+TGG - chr3.2:22649692-22649711 MS.gene91832:intron 40.0%
AAGCTGTTCGTAGTTGGAAC+CGG - chr3.2:22651647-22651666 MS.gene91832:intron 45.0%
AAGGGACCGAAATAGAGAAG+AGG - chr3.2:22649575-22649594 MS.gene91832:intron 45.0%
AATTACATGCACCATAGCGG+AGG + chr3.2:22650698-22650717 None:intergenic 45.0%
ATCTCTTATGCAGCGTAACG+GGG - chr3.2:22651622-22651641 MS.gene91832:intron 45.0%
CAAAACCGGGACTTTACTTC+AGG + chr3.2:22652640-22652659 None:intergenic 45.0%
CATCTCTTATGCAGCGTAAC+GGG - chr3.2:22651621-22651640 MS.gene91832:intron 45.0%
CCATCTCTTATGCAGCGTAA+CGG - chr3.2:22651620-22651639 MS.gene91832:intron 45.0%
CCTATGACTTTCCAGGATCA+GGG - chr3.2:22650528-22650547 MS.gene91832:intron 45.0%
CGACGTATCAGTGTCATGTT+TGG - chr3.2:22652764-22652783 MS.gene91832:CDS 45.0%
GAACTCTTGGTCCTTGCATA+TGG - chr3.2:22651768-22651787 MS.gene91832:intron 45.0%
GCTCAACCAAGCTTCATCAA+AGG - chr3.2:22650190-22650209 MS.gene91832:intron 45.0%
GGCAGAAGAATGATTGAGCT+TGG + chr3.2:22649418-22649437 None:intergenic 45.0%
GGTTGGAGTCCAGAAGATAA+AGG - chr3.2:22653106-22653125 MS.gene91832:CDS 45.0%
GTCGCAAAATCCTGGATTTG+AGG + chr3.2:22652341-22652360 None:intergenic 45.0%
TAGGTCGATGGAGAGATTTC+CGG - chr3.2:22649623-22649642 MS.gene91832:intron 45.0%
TCCAACCTGAAGTAAAGTCC+CGG - chr3.2:22652632-22652651 MS.gene91832:CDS 45.0%
TGCCTTGATCAATGCACAGA+AGG - chr3.2:22652076-22652095 MS.gene91832:intron 45.0%
TGCTGACATACATTGTGGCA+AGG - chr3.2:22650957-22650976 MS.gene91832:intron 45.0%
TGGCATGAAAATAGGTGCAG+AGG + chr3.2:22649439-22649458 None:intergenic 45.0%
TGGTAGTAGTTAGCAACCTC+AGG - chr3.2:22652168-22652187 MS.gene91832:intron 45.0%
TTAAGAGAAACAGTGGGAGC+AGG + chr3.2:22651238-22651257 None:intergenic 45.0%
TTGTGTTAGATCCTCCGCTA+TGG - chr3.2:22650684-22650703 MS.gene91832:intron 45.0%
! AGCCTTCTGTGCATTGATCA+AGG + chr3.2:22652081-22652100 None:intergenic 45.0%
! GCTACACTGGTTGAGATTAC+AGG + chr3.2:22652134-22652153 None:intergenic 45.0%
! GGATTTGGCTGTTGCTGTTA+AGG - chr3.2:22649647-22649666 MS.gene91832:intron 45.0%
! GGTGCTATAGTGGTATGTGT+TGG - chr3.2:22651547-22651566 MS.gene91832:intron 45.0%
! GTGGATTTTGCAAGATGGGT+TGG - chr3.2:22653089-22653108 MS.gene91832:CDS 45.0%
! GTTTTCTCAACAGGTGGCTT+TGG - chr3.2:22651492-22651511 MS.gene91832:intron 45.0%
! TTTGGCTGTTGCTGTTAAGG+CGG - chr3.2:22649650-22649669 MS.gene91832:intron 45.0%
!! AATATGAAGTGTCGGTGCCA+AGG + chr3.2:22652667-22652686 None:intergenic 45.0%
!! GGACTTTACTTCAGGTTGGA+AGG + chr3.2:22652632-22652651 None:intergenic 45.0%
!! GTGGGTGGATTTTGCAAGAT+GGG - chr3.2:22653085-22653104 MS.gene91832:CDS 45.0%
!! TATTCGGACTTTTGAGGGGT+AGG - chr3.2:22652267-22652286 MS.gene91832:intron 45.0%
!!! AGAAGAGGCAATGCTGGTTT+TGG - chr3.2:22649590-22649609 MS.gene91832:intron 45.0%
!!! GAGGAGGTTTTTTGAGTTGG+AGG - chr3.2:22649695-22649714 MS.gene91832:intron 45.0%
!!! ATTTAGAATTAATTTTTTTT+GGG - chr3.2:22652490-22652509 MS.gene91832:intron 5.0%
AACCTCCTCACTATCGAACC+AGG + chr3.2:22649684-22649703 None:intergenic 50.0%
AATTGGACACTGTCGCGTGT+CGG + chr3.2:22650101-22650120 None:intergenic 50.0%
ACCGGGACTTTACTTCAGGT+TGG + chr3.2:22652636-22652655 None:intergenic 50.0%
ACGTCTTCCTCAGCTGGAAA+TGG - chr3.2:22649486-22649505 MS.gene91832:CDS 50.0%
ACTCCAGCACTAATTGCAGG+AGG + chr3.2:22651265-22651284 None:intergenic 50.0%
AGGTGGGGAAGAGGAAGAAA+GGG - chr3.2:22649557-22649576 MS.gene91832:intron 50.0%
ATTTCCAGCTGAGGAAGACG+TGG + chr3.2:22649487-22649506 None:intergenic 50.0%
CCCTGATCCTGGAAAGTCAT+AGG + chr3.2:22650531-22650550 None:intergenic 50.0%
CCGTTACGCTGCATAAGAGA+TGG + chr3.2:22651623-22651642 None:intergenic 50.0%
CGTGTATACCAGTGAAGCAC+CGG + chr3.2:22651669-22651688 None:intergenic 50.0%
GCCTATGACTTTCCAGGATC+AGG - chr3.2:22650527-22650546 MS.gene91832:intron 50.0%
GGTGCCAAGGTTGTCAAAAC+CGG + chr3.2:22652654-22652673 None:intergenic 50.0%
GTGCCAAGGTTGTCAAAACC+GGG + chr3.2:22652653-22652672 None:intergenic 50.0%
TCTTCCTCAGCTGGAAATGG+AGG - chr3.2:22649489-22649508 MS.gene91832:CDS 50.0%
! TTCCTGGTTCGATAGTGAGG+AGG - chr3.2:22649679-22649698 MS.gene91832:intron 50.0%
! TTGGCTGTTGCTGTTAAGGC+GGG - chr3.2:22649651-22649670 MS.gene91832:intron 50.0%
!! AGTCCCGGTTTTGACAACCT+TGG - chr3.2:22652647-22652666 MS.gene91832:CDS 50.0%
!! GGTGGGTGGATTTTGCAAGA+TGG - chr3.2:22653084-22653103 MS.gene91832:CDS 50.0%
!! TTTTCAGGCAGCTGCAGAGT+TGG - chr3.2:22650398-22650417 MS.gene91832:intron 50.0%
ACAGCAACAGCCAAATCCGC+CGG + chr3.2:22649645-22649664 None:intergenic 55.0%
AGTTGGAACCGGTGCTTCAC+TGG - chr3.2:22651658-22651677 MS.gene91832:intron 55.0%
CCAGCACTAATTGCAGGAGG+AGG + chr3.2:22651262-22651281 None:intergenic 55.0%
CCTCCTCCTGCAATTAGTGC+TGG - chr3.2:22651259-22651278 MS.gene91832:intron 55.0%
GAGGTGGGGAAGAGGAAGAA+AGG - chr3.2:22649556-22649575 MS.gene91832:intron 55.0%
GCTGAGGAAGACGTGGAAAC+CGG + chr3.2:22649480-22649499 None:intergenic 55.0%
GGGGCAAAGCTGTTCGTAGT+TGG - chr3.2:22651641-22651660 MS.gene91832:intron 55.0%
GTCGATGGAGAGATTTCCGG+CGG - chr3.2:22649626-22649645 MS.gene91832:intron 55.0%
GTTTCCACGTCTTCCTCAGC+TGG - chr3.2:22649480-22649499 MS.gene91832:CDS 55.0%
TCCTCAGCTGGAAATGGAGG+CGG - chr3.2:22649492-22649511 MS.gene91832:CDS 55.0%
! CGGGGTGTGATGATGTAGCT+TGG + chr3.2:22649369-22649388 None:intergenic 55.0%
! GAAATGGAGGCGGGTTTCCA+GGG - chr3.2:22649502-22649521 MS.gene91832:CDS 55.0%
! GGAGAGATTTCCGGCGGATT+TGG - chr3.2:22649632-22649651 MS.gene91832:intron 55.0%
! GGGTTCCTGGTTCGATAGTG+AGG - chr3.2:22649676-22649695 MS.gene91832:intron 55.0%
! TGGCTGTTGCTGTTAAGGCG+GGG - chr3.2:22649652-22649671 MS.gene91832:intron 55.0%
!! TCTCAACAGGTGGCTTTGGC+AGG - chr3.2:22651496-22651515 MS.gene91832:intron 55.0%
!!! ATGCTGGTTTTGGCTGAGGC+TGG - chr3.2:22649600-22649619 MS.gene91832:intron 55.0%
!!! GGCAATGCTGGTTTTGGCTG+AGG - chr3.2:22649596-22649615 MS.gene91832:intron 55.0%
!!! TGGTTTTGGCTGAGGCTGGT+AGG - chr3.2:22649604-22649623 MS.gene91832:intron 55.0%
CCTCAGCTGGAAATGGAGGC+GGG - chr3.2:22649493-22649512 MS.gene91832:CDS 60.0%
GACGGCCCGCTGAACTTTCA+CGG + chr3.2:22650763-22650782 None:intergenic 60.0%
TTTCCAGGGAGTGGAGGTGG+TGG - chr3.2:22649516-22649535 MS.gene91832:intron 60.0%
! CTGTTGCTGTTAAGGCGGGG+CGG - chr3.2:22649655-22649674 MS.gene91832:intron 60.0%
! GGAAATGGAGGCGGGTTTCC+AGG - chr3.2:22649501-22649520 MS.gene91832:CDS 60.0%
! TGTTGCTGTTAAGGCGGGGC+GGG - chr3.2:22649656-22649675 MS.gene91832:intron 60.0%
CCCGCCTCCATTTCCAGCTG+AGG + chr3.2:22649496-22649515 None:intergenic 65.0%
GGCTGAGGCTGGTAGGTCGA+TGG - chr3.2:22649611-22649630 MS.gene91832:intron 65.0%
GGGTTTCCAGGGAGTGGAGG+TGG - chr3.2:22649513-22649532 MS.gene91832:intron 65.0%
!! GAGTGGAGGTGGTGGTGGAG+GGG - chr3.2:22649524-22649543 MS.gene91832:intron 65.0%
!! GGAGTGGAGGTGGTGGTGGA+GGG - chr3.2:22649523-22649542 MS.gene91832:intron 65.0%
AGGGGACGACGGTGGAGGTG+GGG - chr3.2:22649542-22649561 MS.gene91832:intron 70.0%
CCACCACCACCTCCACTCCC+TGG + chr3.2:22649522-22649541 None:intergenic 70.0%
CGACGGTGGAGGTGGGGAAG+AGG - chr3.2:22649548-22649567 MS.gene91832:intron 70.0%
GAGGGGACGACGGTGGAGGT+GGG - chr3.2:22649541-22649560 MS.gene91832:intron 70.0%
! CCAGGGAGTGGAGGTGGTGG+TGG - chr3.2:22649519-22649538 MS.gene91832:intron 70.0%
! GGAGGCGGGTTTCCAGGGAG+TGG - chr3.2:22649507-22649526 MS.gene91832:CDS 70.0%
! GGCGGGTTTCCAGGGAGTGG+AGG - chr3.2:22649510-22649529 MS.gene91832:CDS 70.0%
! GTTAAGGCGGGGCGGGTTCC+TGG - chr3.2:22649663-22649682 MS.gene91832:intron 70.0%
!! GGGAGTGGAGGTGGTGGTGG+AGG - chr3.2:22649522-22649541 MS.gene91832:intron 70.0%
!! GGTGGTGGTGGAGGGGACGA+CGG - chr3.2:22649531-22649550 MS.gene91832:intron 70.0%
GGAGGGGACGACGGTGGAGG+TGG - chr3.2:22649540-22649559 MS.gene91832:intron 75.0%
GGTGGAGGGGACGACGGTGG+AGG - chr3.2:22649537-22649556 MS.gene91832:intron 75.0%
!! GGTGGTGGAGGGGACGACGG+TGG - chr3.2:22649534-22649553 MS.gene91832:intron 75.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 22649264 22653133 22649264 ID=MS.gene91832
chr3.2 mRNA 22649264 22653133 22649264 ID=MS.gene91832.t1;Parent=MS.gene91832
chr3.2 exon 22652564 22653133 22652564 ID=MS.gene91832.t1.exon1;Parent=MS.gene91832.t1
chr3.2 CDS 22652564 22653133 22652564 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22651924 22651992 22651924 ID=MS.gene91832.t1.exon2;Parent=MS.gene91832.t1
chr3.2 CDS 22651924 22651992 22651924 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22651070 22651201 22651070 ID=MS.gene91832.t1.exon3;Parent=MS.gene91832.t1
chr3.2 CDS 22651070 22651201 22651070 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22650839 22650892 22650839 ID=MS.gene91832.t1.exon4;Parent=MS.gene91832.t1
chr3.2 CDS 22650839 22650892 22650839 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22650718 22650762 22650718 ID=MS.gene91832.t1.exon5;Parent=MS.gene91832.t1
chr3.2 CDS 22650718 22650762 22650718 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22650208 22650341 22650208 ID=MS.gene91832.t1.exon6;Parent=MS.gene91832.t1
chr3.2 CDS 22650208 22650341 22650208 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22649406 22649531 22649406 ID=MS.gene91832.t1.exon7;Parent=MS.gene91832.t1
chr3.2 CDS 22649406 22649531 22649406 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
chr3.2 exon 22649264 22649312 22649264 ID=MS.gene91832.t1.exon8;Parent=MS.gene91832.t1
chr3.2 CDS 22649264 22649312 22649264 ID=cds.MS.gene91832.t1;Parent=MS.gene91832.t1
Gene Sequence

>MS.gene91832

ATGGCTATGGCTATGGCTTCCTTCTCCAACATTTCAACACACTTGTTCTCTCATCACACTCACACTCAAACCAATTTCTACCACTGTAGCCATTCTTCTTTACCAAGCTACATCATCACACCCCGCCATGAAGTTTCTACATTCTTCTCTTCCAAGCTCAATCATTCTTCTGCCTCTGCACCTATTTTCATGCCAAATCATTTGCTTCATTCTCCGGTTTCCACGTCTTCCTCAGCTGGAAATGGAGGCGGGTTTCCAGGGAGTGGAGGTGGTGGTGGAGGGGACGACGGTGGAGGTGGGGAAGAGGAAGAAAGGGACCGAAATAGAGAAGAGGCAATGCTGGTTTTGGCTGAGGCTGGTAGGTCGATGGAGAGATTTCCGGCGGATTTGGCTGTTGCTGTTAAGGCGGGGCGGGTTCCTGGTTCGATAGTGAGGAGGTTTTTTGAGTTGGAGGAGTCAGTTGTTTTCAGATGGTTGTTAAAATTTGGAGGGTTTAAGGAAAGGTTGTTGGCTGATGATTTGTTCTTAACTAAGCTTGTTATGGAATGTGTTGTTGTCATCTTCACCAAGGTTTATTTCCATTATTACAATTTAGTGTATTGTGTGATTTATGAACATGTTACTGAGATGATTAAGATTAAGACTAAGATTTTTTTATAAGCTAATTAAGATTAAGAATATTTCTTGCTAACTGAGATGATTATTACTAGCCTAAAAAACAAGTAAAATAGAGATATAAGTTGTTTTAGAATATGAGGTATATTTTACTAGAATAGAACTTGCATTGGTGCTATGCAAAAATGTACACTCTTGGGATTAGGCGTGTCTCTGTGTCCGACACGCGACAGTGTCCAATTTTTGTGTCAGAGTTAGTACTTCATATAGTGTGCTTGTGCTCAGATATTGACTACTAGCTTGGTTATAGAGCTCAACCAAGCTTCATCAAAGGTTCCAAATTCCTTTTGTTACCTTTACAAGTTGGAATCTCTCTCTACAGGAATGCTTTTGCATTACCATTATTTGCTTAAAAATATTAAGATTGTTTTCGGTTCATGAAATTATCTTGAAAATTAGCCATACTAACAAAAGAGTGATGGCAAGAAAATTAGCCATATGAAATGGATATCTTATCTGTTTTCAGGCAGCTGCAGAGTTGGAGAAGCGAAAAGAAAATTTCACAAAGGAGATGGATTTTGTTGTTGCTAATGTGGTAAGCTTATGAACAAGATATACCGTCAAACAAAAAATTTGAGAACTTTTTTTGCCTATGACTTTCCAGGATCAGGGTTCAAATTGTTATTACTCATTAGGATATGATGAAAATCTCTGATTTGCTCATAAGACACAAGATTATATAGTTTTTCATTTAAATTCATGTTTGCTAAATATACATTTGTGGTAGTGCTTCAAATGACGCTTATTGTGTTAGATCCTCCGCTATGGTGCATGTAATTTAGGCCAGTCGGTCAAATTAATAATTAGATATTAGTCATTTACCGTGAAAGTTCAGCGGGCCGTCTGCATCATTTTCCCTCTTCCTTCCAAAATGCAGTTGATAAATAAAGCTTGATATACACATTTATAGCTTATACTAACTGATACATTTATTGAAGAATGAGCATAACTTGTGCAAAGTTGTTATAATAAGCATTTTATACGCTGTAGAAACTGCTAACAAAGTTAGTTCTTTAAGTGCTGACATACATTGTGGCAAGGTTCTTAGTTGGAAAAGATTAATTATGATTGTACAATGTAGAAATTTTTATGTCAGCTCTATCTATTAATGAATAATTTTGAACCAACCTTCATCATTTATTCTTTTTCATTCCAATAATCTTCTTGATGTCGCATTTTGGCTTTTGTTCTCATCGTCTTTGCTTTATTATGTAAGAATTTGTTAACCGTCTTATTCAGTTTGTTACTTTATCTTAGGTAACAGGCATTGTAACAGGTTTTGTACTAGTTTGGTTTCCTGCTCCCACTGTTTCTCTTAAACCTCCTCCTGCAATTAGTGCTGGAGTTATTGCCAAATTCTTCTATGGATGTCCTGAAAATGCTTTTCAAGTTAAGAAACTTCATAGCTTTCTGCATCTCCTTTTCATATTCAGTATAAAAATTAAGTGCTTAACATATAAGTGCTTATGTATAACCTATTTAATTAACGAAAGATAACGTGATACTCAAATAAACCGATCCATACATATATGATCAGTTGTTGATGAATTTTCGTTTTCTCAACAGGTGGCTTTGGCAGGAACATCATATACACTTCTACAAAGAATAGGTGCTATAGTGGTATGTGTTGGATCATTTAAACCAACTCAAATAGTTATTTCCTTATAAGTGAAGGTCATCTCCATCTCTTATGCAGCGTAACGGGGCAAAGCTGTTCGTAGTTGGAACCGGTGCTTCACTGGTATACACGCAATTTACTTTCTTCACAAAATTATCCTTTTAGTTTCTTCAAACTTTTTCATACATTTTTTAATATTCTCTGATTTTGCGAACTCTTGGTCCTTGCATATGGAACTCCATTAGTTTCCATCGTTCTATTTTCATGTGAATCTTCGCCAACATCTATAATTGTAGATTATAGATGGAAAAACTTCCTAGCATATCCTTTTGGTGAATTCAACGTTCTGCAAACAATCGAGAAAGTGGACATAGGGTTTATCTCCTTGTGTACTTTGTCTATAATTTCAGCATGAAACTTGAATGTTGGTCTAAAATTCAAAACAAATCACAGCATCCATGAATTTCTAACACGAGTGCTTGCAATATTTTTTATTCAGGTTGGTATAGGTATAACAAATGCCTTGATCAATGCACAGAAGGCTGTAAATAAAGCATTTACTGTTGAGAATTTACCTGTAATCTCAACCAGTGTAGCATATGGGATTTACATGGTAGTAGTTAGCAACCTCAGGTATTCCATTTTCCTTCAACAAACTACTACAGAATTCCAGACACTTAGTAATTAATCAAATATTCTCGTGCATGTATTATTCGGACTTTTGAGGGGTAGGTTGAGTGTAAATACCACCGACCATTGTTGTCAAAATCCCAACTTAAATCCTCAAATCCAGGATTTTGCGACTTTCTTCACCTTGAACGACTCAAATCCATAGAAGAATCCCAAAATAGAAAAAATCCATCGATTTTGATTGCGATTTTACGATTTCTTATCAACTAAGTCATATATGACTATATACCATTTATAACATAGATTTAGAATTAATTTTTTTTGGGTAAAATCCATTGATTTTGATTGCAATTTTACAAATTCCTATATCGATTCTACAAAAGTCTTTGAGTAAAATCTTTCGATTTTGATTGCGATTTTACGAGTCCCAATTTTTCTATTCCCTTCCAACCTGAAGTAAAGTCCCGGTTTTGACAACCTTGGCACCGACACTTCATATTGAAGACGTGTTCAGTGTCTAACACTTACACAGATGTTTTCATTCGGTTATTTTATATCCTCAAATTATTGTGGATGTCGACGTATCAGTGTCATGTTTGGTCTTATGTGTTTAGTATTTTAACCTGAGGTAAATATTTGATTTTTTATTTTTCATTTAAGGATTTGTTTATATGATCAGGTATCAAGTACTAGCAGGAATTATTGAGCAACGGATTCTGGAACCATTGCTACGTCAAAACAAACTTATACTAACTGGATCATACTTTATTATCAGAACTGCTAATACTTATTGGGGATCACTACTGTAAGATTATTGATTTATCTCAGTCAATATTTATAGCCTAAAAGTTATTATGTTCTTCTCAGTTCTCATGATTTGGTATATATGTTTGAGTAGGTGGGTGGATTTTGCAAGATGGGTTGGAGTCCAGAAGATAAAGGCTTAA

Protein sequence

>MS.gene91832.t1

MAMAMASFSNISTHLFSHHTHTQTNFYHCSHSSLPSYIITPRHEVSTFFSSKLNHSSASAPIFMPNHLLHSPVSTSSSAGNGGGFPGSGGGGGGDDGGGGEEEERDRNREEAMLVLAEAGRSMERFPADLAVAVKAGRVPGSIVRRFFELEESVVFRWLLKFGGFKERLLADDLFLTKLVMECVVVIFTKAAAELEKRKENFTKEMDFVVANVVTGIVTGFVLVWFPAPTVSLKPPPAISAGVIAKFFYGCPENAFQVALAGTSYTLLQRIGAIVRNGAKLFVVGTGASLVGIGITNALINAQKAVNKAFTVENLPVISTSVAYGIYMVVVSNLRYQVLAGIIEQRILEPLLRQNKLILTGSYFIIRTANTYWGSLLWVDFARWVGVQKIKA