Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438420 | XP_013446956.1 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 4.12e-178 | 499 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438420 | sp|Q9FGQ2|SWT13_ARATH | 57.676 | 241 | 100 | 2 | 1 | 240 | 1 | 240 | 3.63e-93 | 279 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438420 | A0A072TVU1 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 1.97e-178 | 499 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026120 | Msa1438420 | 0.830405 | 2.992202e-55 | -8.615850e-47 |
Msa0028610 | Msa1438420 | 0.852516 | 4.386355e-61 | -8.615850e-47 |
Msa0032040 | Msa1438420 | 0.816274 | 6.016881e-52 | -8.615850e-47 |
Msa0033600 | Msa1438420 | 0.804515 | 2.081615e-49 | -8.615850e-47 |
Msa0033650 | Msa1438420 | 0.802642 | 5.093257e-49 | -8.615850e-47 |
Msa0035090 | Msa1438420 | 0.863110 | 3.145850e-64 | -8.615850e-47 |
Msa0039200 | Msa1438420 | 0.853453 | 2.365622e-61 | -8.615850e-47 |
Msa0040190 | Msa1438420 | 0.816362 | 5.751302e-52 | -8.615850e-47 |
Msa0046670 | Msa1438420 | 0.819589 | 1.072790e-52 | -8.615850e-47 |
Msa0050400 | Msa1438420 | 0.800262 | 1.564917e-48 | -8.615850e-47 |
Msa0065190 | Msa1438420 | 0.808891 | 2.478264e-50 | -8.615850e-47 |
Msa0074310 | Msa1438420 | 0.815466 | 9.114619e-52 | -8.615850e-47 |
Msa0076280 | Msa1438420 | 0.846233 | 2.470778e-59 | -8.615850e-47 |
Msa0083570 | Msa1438420 | 0.838371 | 2.991759e-57 | -8.615850e-47 |
Msa0086820 | Msa1438420 | 0.855055 | 8.156541e-62 | -8.615850e-47 |
Msa0087880 | Msa1438420 | 0.809043 | 2.299553e-50 | -8.615850e-47 |
Msa0092750 | Msa1438420 | 0.853201 | 2.793532e-61 | -8.615850e-47 |
Msa0095140 | Msa1438420 | 0.819194 | 1.320066e-52 | -8.615850e-47 |
Msa0095190 | Msa1438420 | 0.801926 | 7.150099e-49 | -8.615850e-47 |
Msa0095240 | Msa1438420 | 0.803700 | 3.076140e-49 | -8.615850e-47 |
Msa0095270 | Msa1438420 | 0.832842 | 7.503274e-56 | -8.615850e-47 |
Msa0096230 | Msa1438420 | 0.852824 | 3.583145e-61 | -8.615850e-47 |
Msa0101150 | Msa1438420 | 0.829219 | 5.819286e-55 | -8.615850e-47 |
Msa0101210 | Msa1438420 | 0.827697 | 1.355684e-54 | -8.615850e-47 |
Msa0109070 | Msa1438420 | 0.808859 | 2.518290e-50 | -8.615850e-47 |
Msa0112800 | Msa1438420 | 0.837240 | 5.839777e-57 | -8.615850e-47 |
Msa0114960 | Msa1438420 | 0.815129 | 1.082943e-51 | -8.615850e-47 |
Msa1351560 | Msa1438420 | 0.832720 | 8.048004e-56 | -8.615850e-47 |
Msa1354850 | Msa1438420 | 0.825422 | 4.728289e-54 | -8.615850e-47 |
Msa1355020 | Msa1438420 | 0.832681 | 8.229283e-56 | -8.615850e-47 |
Msa1366700 | Msa1438420 | 0.801041 | 1.085483e-48 | -8.615850e-47 |
Msa1370830 | Msa1438420 | 0.848837 | 4.750115e-60 | -8.615850e-47 |
Msa1371250 | Msa1438420 | 0.984475 | 1.145786e-160 | -8.615850e-47 |
Msa1373590 | Msa1438420 | 0.822752 | 2.002653e-53 | -8.615850e-47 |
Msa1377170 | Msa1438420 | 0.802534 | 5.361490e-49 | -8.615850e-47 |
Msa1380540 | Msa1438420 | 0.812580 | 3.946123e-51 | -8.615850e-47 |
Msa1381720 | Msa1438420 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
Msa1385940 | Msa1438420 | 0.852484 | 4.480283e-61 | -8.615850e-47 |
Msa1393600 | Msa1438420 | 0.824527 | 7.692317e-54 | -8.615850e-47 |
Msa1394090 | Msa1438420 | 0.830428 | 2.952939e-55 | -8.615850e-47 |
Msa1394100 | Msa1438420 | 0.814183 | 1.754305e-51 | -8.615850e-47 |
Msa1394280 | Msa1438420 | 0.820991 | 5.118174e-53 | -8.615850e-47 |
Msa1400330 | Msa1438420 | 0.806658 | 7.391067e-50 | -8.615850e-47 |
Msa1400600 | Msa1438420 | 0.840652 | 7.642382e-58 | -8.615850e-47 |
Msa1415120 | Msa1438420 | 0.844768 | 6.160735e-59 | -8.615850e-47 |
Msa1419040 | Msa1438420 | 0.837089 | 6.383700e-57 | -8.615850e-47 |
Msa1425050 | Msa1438420 | 0.819913 | 9.049354e-53 | -8.615850e-47 |
Msa1430940 | Msa1438420 | 0.810187 | 1.305558e-50 | -8.615850e-47 |
Msa1435470 | Msa1438420 | 0.807823 | 4.186778e-50 | -8.615850e-47 |
Msa1438420 | Msa1439160 | 0.867424 | 1.382550e-65 | -8.615850e-47 |
Msa0606680 | Msa1438420 | 0.859492 | 3.984790e-63 | -8.615850e-47 |
Msa0615850 | Msa1438420 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
Msa0619480 | Msa1438420 | 0.802873 | 4.562781e-49 | -8.615850e-47 |
Msa0622400 | Msa1438420 | 0.835345 | 1.771405e-56 | -8.615850e-47 |
Msa0624890 | Msa1438420 | 0.822904 | 1.845249e-53 | -8.615850e-47 |
Msa0626890 | Msa1438420 | 0.828466 | 8.852495e-55 | -8.615850e-47 |
Msa0641970 | Msa1438420 | 0.811146 | 8.101885e-51 | -8.615850e-47 |
Msa0648410 | Msa1438420 | 0.804594 | 2.004256e-49 | -8.615850e-47 |
Msa0659640 | Msa1438420 | 0.810773 | 9.755177e-51 | -8.615850e-47 |
Msa0665010 | Msa1438420 | 0.838861 | 2.235589e-57 | -8.615850e-47 |
Msa0670490 | Msa1438420 | 0.806044 | 9.958901e-50 | -8.615850e-47 |
Msa0681040 | Msa1438420 | 0.801045 | 1.083654e-48 | -8.615850e-47 |
Msa0687320 | Msa1438420 | 0.814739 | 1.321568e-51 | -8.615850e-47 |
Msa0688350 | Msa1438420 | 0.819392 | 1.189556e-52 | -8.615850e-47 |
Msa0694170 | Msa1438420 | 0.811097 | 8.301890e-51 | -8.615850e-47 |
Msa0698880 | Msa1438420 | 0.804246 | 2.368403e-49 | -8.615850e-47 |
Msa0698900 | Msa1438420 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
Msa0704750 | Msa1438420 | 0.813229 | 2.845215e-51 | -8.615850e-47 |
Msa0706710 | Msa1438420 | 0.977986 | 6.867747e-145 | -8.615850e-47 |
Msa0713530 | Msa1438420 | 0.836508 | 8.982141e-57 | -8.615850e-47 |
Msa0714160 | Msa1438420 | 0.806305 | 8.773958e-50 | -8.615850e-47 |
Msa0715180 | Msa1438420 | 0.814202 | 1.736841e-51 | -8.615850e-47 |
Msa0718570 | Msa1438420 | 0.823703 | 1.200511e-53 | -8.615850e-47 |
Msa0720850 | Msa1438420 | 0.810515 | 1.109518e-50 | -8.615850e-47 |
Msa0727020 | Msa1438420 | 0.815492 | 8.990273e-52 | -8.615850e-47 |
Msa0729590 | Msa1438420 | 0.806997 | 6.267575e-50 | -8.615850e-47 |
Msa0731740 | Msa1438420 | 0.802753 | 4.831401e-49 | -8.615850e-47 |
Msa0733570 | Msa1438420 | 0.845738 | 3.367672e-59 | -8.615850e-47 |
Msa0736330 | Msa1438420 | 0.810393 | 1.178997e-50 | -8.615850e-47 |
Msa0736930 | Msa1438420 | 0.828662 | 7.935890e-55 | -8.615850e-47 |
Msa0751000 | Msa1438420 | 0.816343 | 5.806389e-52 | -8.615850e-47 |
Msa0755590 | Msa1438420 | 0.849168 | 3.845058e-60 | -8.615850e-47 |
Msa0759680 | Msa1438420 | 0.838085 | 3.545744e-57 | -8.615850e-47 |
Msa0766880 | Msa1438420 | 0.830253 | 3.258474e-55 | -8.615850e-47 |
Msa0774680 | Msa1438420 | 0.841413 | 4.824437e-58 | -8.615850e-47 |
Msa0778060 | Msa1438420 | 0.800507 | 1.395426e-48 | -8.615850e-47 |
Msa0786090 | Msa1438420 | 0.811387 | 7.181645e-51 | -8.615850e-47 |
Msa0794040 | Msa1438420 | 0.839663 | 1.384676e-57 | -8.615850e-47 |
Msa0797240 | Msa1438420 | 0.820714 | 5.926611e-53 | -8.615850e-47 |
Msa0804930 | Msa1438420 | 0.821574 | 3.756797e-53 | -8.615850e-47 |
Msa0812230 | Msa1438420 | 0.841495 | 4.590779e-58 | -8.615850e-47 |
Msa0821490 | Msa1438420 | 0.806888 | 6.609900e-50 | -8.615850e-47 |
Msa0830410 | Msa1438420 | 0.801091 | 1.060141e-48 | -8.615850e-47 |
Msa0834160 | Msa1438420 | 0.800832 | 1.198008e-48 | -8.615850e-47 |
Msa0835010 | Msa1438420 | 0.838630 | 2.564988e-57 | -8.615850e-47 |
Msa0836200 | Msa1438420 | 0.804297 | 2.311605e-49 | -8.615850e-47 |
Msa0839730 | Msa1438420 | 0.826840 | 2.174637e-54 | -8.615850e-47 |
Msa0841980 | Msa1438420 | 0.820131 | 8.066942e-53 | -8.615850e-47 |
Msa0124310 | Msa1438420 | 0.835318 | 1.799268e-56 | -8.615850e-47 |
Msa0130120 | Msa1438420 | 0.866953 | 1.954464e-65 | -8.615850e-47 |
Msa0133670 | Msa1438420 | 0.852407 | 4.711348e-61 | -8.615850e-47 |
Msa0133880 | Msa1438420 | 0.856293 | 3.547150e-62 | -8.615850e-47 |
Msa0134550 | Msa1438420 | 0.808466 | 3.054692e-50 | -8.615850e-47 |
Msa0143360 | Msa1438420 | 0.831759 | 1.391143e-55 | -8.615850e-47 |
Msa0144510 | Msa1438420 | 0.828221 | 1.013876e-54 | -8.615850e-47 |
Msa0152610 | Msa1438420 | 0.805401 | 1.358767e-49 | -8.615850e-47 |
Msa0156780 | Msa1438420 | 0.823874 | 1.094944e-53 | -8.615850e-47 |
Msa0166580 | Msa1438420 | 0.838772 | 2.357386e-57 | -8.615850e-47 |
Msa0168680 | Msa1438420 | 0.825649 | 4.178341e-54 | -8.615850e-47 |
Msa0174800 | Msa1438420 | 0.829017 | 6.511041e-55 | -8.615850e-47 |
Msa0175480 | Msa1438420 | 0.807838 | 4.155916e-50 | -8.615850e-47 |
Msa0175900 | Msa1438420 | 0.858554 | 7.606460e-63 | -8.615850e-47 |
Msa0180980 | Msa1438420 | 0.829190 | 5.913553e-55 | -8.615850e-47 |
Msa0181290 | Msa1438420 | 0.816574 | 5.155498e-52 | -8.615850e-47 |
Msa0184120 | Msa1438420 | 0.853637 | 2.094687e-61 | -8.615850e-47 |
Msa0186750 | Msa1438420 | 0.823014 | 1.740041e-53 | -8.615850e-47 |
Msa0187720 | Msa1438420 | 0.803555 | 3.296716e-49 | -8.615850e-47 |
Msa0206600 | Msa1438420 | 0.808593 | 2.870017e-50 | -8.615850e-47 |
Msa0207530 | Msa1438420 | 0.890576 | 8.697020e-74 | -8.615850e-47 |
Msa0207900 | Msa1438420 | 0.888493 | 5.624207e-73 | -8.615850e-47 |
Msa0207990 | Msa1438420 | 0.840269 | 9.623956e-58 | -8.615850e-47 |
Msa0216010 | Msa1438420 | 0.811822 | 5.775626e-51 | -8.615850e-47 |
Msa0218480 | Msa1438420 | 0.818109 | 2.327246e-52 | -8.615850e-47 |
Msa0218590 | Msa1438420 | 0.818619 | 1.783643e-52 | -8.615850e-47 |
Msa0221860 | Msa1438420 | 0.802179 | 6.341633e-49 | -8.615850e-47 |
Msa0222510 | Msa1438420 | 0.853705 | 2.002318e-61 | -8.615850e-47 |
Msa1235050 | Msa1438420 | 0.820363 | 7.137231e-53 | -8.615850e-47 |
Msa1246420 | Msa1438420 | 0.801318 | 9.526499e-49 | -8.615850e-47 |
Msa1248400 | Msa1438420 | 0.818322 | 2.082874e-52 | -8.615850e-47 |
Msa1251960 | Msa1438420 | 0.807719 | 4.406527e-50 | -8.615850e-47 |
Msa1252040 | Msa1438420 | 0.810844 | 9.419470e-51 | -8.615850e-47 |
Msa1255500 | Msa1438420 | 0.814725 | 1.330940e-51 | -8.615850e-47 |
Msa1264230 | Msa1438420 | 0.829875 | 4.028968e-55 | -8.615850e-47 |
Msa1267800 | Msa1438420 | 0.811146 | 8.098911e-51 | -8.615850e-47 |
Msa1274310 | Msa1438420 | 0.802970 | 4.357067e-49 | -8.615850e-47 |
Msa1279240 | Msa1438420 | 0.800259 | 1.567605e-48 | -8.615850e-47 |
Msa1294520 | Msa1438420 | 0.804464 | 2.133346e-49 | -8.615850e-47 |
Msa1295840 | Msa1438420 | 0.800909 | 1.155274e-48 | -8.615850e-47 |
Msa1302920 | Msa1438420 | 0.841591 | 4.330777e-58 | -8.615850e-47 |
Msa1309910 | Msa1438420 | 0.831554 | 1.562911e-55 | -8.615850e-47 |
Msa1316160 | Msa1438420 | 0.801939 | 7.105127e-49 | -8.615850e-47 |
Msa1327820 | Msa1438420 | 0.807421 | 5.095603e-50 | -8.615850e-47 |
Msa1332180 | Msa1438420 | 0.807310 | 5.380240e-50 | -8.615850e-47 |
Msa1336350 | Msa1438420 | 0.816270 | 6.028598e-52 | -8.615850e-47 |
Msa1343540 | Msa1438420 | 0.816542 | 5.241960e-52 | -8.615850e-47 |
Msa0369750 | Msa1438420 | 0.817268 | 3.601263e-52 | -8.615850e-47 |
Msa0371620 | Msa1438420 | 0.812017 | 5.239069e-51 | -8.615850e-47 |
Msa0372550 | Msa1438420 | 0.805082 | 1.584930e-49 | -8.615850e-47 |
Msa0373950 | Msa1438420 | 0.810411 | 1.167979e-50 | -8.615850e-47 |
Msa0377460 | Msa1438420 | 0.842133 | 3.113828e-58 | -8.615850e-47 |
Msa0379900 | Msa1438420 | 0.815236 | 1.025007e-51 | -8.615850e-47 |
Msa0385400 | Msa1438420 | 0.806039 | 9.982950e-50 | -8.615850e-47 |
Msa0390950 | Msa1438420 | 0.843928 | 1.036093e-58 | -8.615850e-47 |
Msa0392410 | Msa1438420 | 0.827473 | 1.534215e-54 | -8.615850e-47 |
Msa0392450 | Msa1438420 | 0.821500 | 3.906914e-53 | -8.615850e-47 |
Msa0392480 | Msa1438420 | 0.835460 | 1.656386e-56 | -8.615850e-47 |
Msa0404860 | Msa1438420 | 0.806331 | 8.662294e-50 | -8.615850e-47 |
Msa0413040 | Msa1438420 | 0.801947 | 7.077940e-49 | -8.615850e-47 |
Msa0417130 | Msa1438420 | 0.801071 | 1.070606e-48 | -8.615850e-47 |
Msa0420080 | Msa1438420 | 0.849329 | 3.467462e-60 | -8.615850e-47 |
Msa0421100 | Msa1438420 | 0.817906 | 2.585476e-52 | -8.615850e-47 |
Msa0423110 | Msa1438420 | 0.820338 | 7.229220e-53 | -8.615850e-47 |
Msa0426860 | Msa1438420 | 0.809976 | 1.449862e-50 | -8.615850e-47 |
Msa0426890 | Msa1438420 | 0.824621 | 7.309803e-54 | -8.615850e-47 |
Msa0426990 | Msa1438420 | 0.838948 | 2.122771e-57 | -8.615850e-47 |
Msa0427050 | Msa1438420 | 0.816333 | 5.836226e-52 | -8.615850e-47 |
Msa0433350 | Msa1438420 | 0.820653 | 6.121057e-53 | -8.615850e-47 |
Msa0434630 | Msa1438420 | 0.817619 | 3.001524e-52 | -8.615850e-47 |
Msa0463580 | Msa1438420 | 0.817083 | 3.963807e-52 | -8.615850e-47 |
Msa0463960 | Msa1438420 | 0.804060 | 2.589577e-49 | -8.615850e-47 |
Msa0466090 | Msa1438420 | 0.841680 | 4.102122e-58 | -8.615850e-47 |
Msa0473320 | Msa1438420 | 0.840334 | 9.259155e-58 | -8.615850e-47 |
Msa0473450 | Msa1438420 | 0.835346 | 1.770108e-56 | -8.615850e-47 |
Msa0476150 | Msa1438420 | 0.800793 | 1.219958e-48 | -8.615850e-47 |
Msa0477070 | Msa1438420 | 0.839085 | 1.955916e-57 | -8.615850e-47 |
Msa0981300 | Msa1438420 | 0.844320 | 8.133882e-59 | -8.615850e-47 |
Msa0981900 | Msa1438420 | 0.806688 | 7.283208e-50 | -8.615850e-47 |
Msa0983670 | Msa1438420 | 0.807370 | 5.224618e-50 | -8.615850e-47 |
Msa1016130 | Msa1438420 | 0.812574 | 3.959202e-51 | -8.615850e-47 |
Msa1024580 | Msa1438420 | 0.814191 | 1.746880e-51 | -8.615850e-47 |
Msa1031220 | Msa1438420 | 0.811853 | 5.686192e-51 | -8.615850e-47 |
Msa1037570 | Msa1438420 | 0.814118 | 1.813009e-51 | -8.615850e-47 |
Msa1038420 | Msa1438420 | 0.804833 | 1.786869e-49 | -8.615850e-47 |
Msa1042380 | Msa1438420 | 0.831354 | 1.750945e-55 | -8.615850e-47 |
Msa1049440 | Msa1438420 | 0.822686 | 2.073897e-53 | -8.615850e-47 |
Msa1056520 | Msa1438420 | 0.812544 | 4.019914e-51 | -8.615850e-47 |
Msa1057320 | Msa1438420 | 0.810750 | 9.867957e-51 | -8.615850e-47 |
Msa1071460 | Msa1438420 | 0.809058 | 2.283125e-50 | -8.615850e-47 |
Msa1084630 | Msa1438420 | 0.807073 | 6.039757e-50 | -8.615850e-47 |
Msa1086020 | Msa1438420 | 0.820106 | 8.170972e-53 | -8.615850e-47 |
Msa1086060 | Msa1438420 | 0.818147 | 2.280771e-52 | -8.615850e-47 |
Msa1086160 | Msa1438420 | 0.805626 | 1.218802e-49 | -8.615850e-47 |
Msa1086330 | Msa1438420 | 0.818419 | 1.980024e-52 | -8.615850e-47 |
Msa1086340 | Msa1438420 | 0.805675 | 1.190388e-49 | -8.615850e-47 |
Msa1086520 | Msa1438420 | 0.808365 | 3.209590e-50 | -8.615850e-47 |
Msa1086630 | Msa1438420 | 0.836673 | 8.152467e-57 | -8.615850e-47 |
Msa1086690 | Msa1438420 | 0.804590 | 2.007641e-49 | -8.615850e-47 |
Msa1086830 | Msa1438420 | 0.832533 | 8.954083e-56 | -8.615850e-47 |
Msa0256170 | Msa1438420 | 0.812429 | 4.258586e-51 | -8.615850e-47 |
Msa0264020 | Msa1438420 | 0.804037 | 2.617990e-49 | -8.615850e-47 |
Msa0268180 | Msa1438420 | 0.808767 | 2.634272e-50 | -8.615850e-47 |
Msa0268220 | Msa1438420 | 0.822297 | 2.554000e-53 | -8.615850e-47 |
Msa0268340 | Msa1438420 | 0.811972 | 5.357586e-51 | -8.615850e-47 |
Msa0268420 | Msa1438420 | 0.814828 | 1.262743e-51 | -8.615850e-47 |
Msa0268460 | Msa1438420 | 0.814864 | 1.239972e-51 | -8.615850e-47 |
Msa0268500 | Msa1438420 | 0.812457 | 4.200080e-51 | -8.615850e-47 |
Msa0268540 | Msa1438420 | 0.808719 | 2.697302e-50 | -8.615850e-47 |
Msa0269060 | Msa1438420 | 0.805175 | 1.515354e-49 | -8.615850e-47 |
Msa0270610 | Msa1438420 | 0.851453 | 8.786592e-61 | -8.615850e-47 |
Msa0270640 | Msa1438420 | 0.830461 | 2.899382e-55 | -8.615850e-47 |
Msa0285710 | Msa1438420 | 0.825247 | 5.202119e-54 | -8.615850e-47 |
Msa0301300 | Msa1438420 | 0.809846 | 1.546328e-50 | -8.615850e-47 |
Msa0301800 | Msa1438420 | 0.874311 | 7.456345e-68 | -8.615850e-47 |
Msa0302020 | Msa1438420 | 0.808526 | 2.966552e-50 | -8.615850e-47 |
Msa0307490 | Msa1438420 | 0.817870 | 2.635052e-52 | -8.615850e-47 |
Msa0307750 | Msa1438420 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
Msa0324060 | Msa1438420 | 0.823647 | 1.237580e-53 | -8.615850e-47 |
Msa0330370 | Msa1438420 | 0.800244 | 1.578552e-48 | -8.615850e-47 |
Msa0338670 | Msa1438420 | 0.801357 | 9.353736e-49 | -8.615850e-47 |
Msa0344250 | Msa1438420 | 0.834797 | 2.434416e-56 | -8.615850e-47 |
Msa1124440 | Msa1438420 | 0.827159 | 1.825279e-54 | -8.615850e-47 |
Msa1125100 | Msa1438420 | 0.833919 | 4.043521e-56 | -8.615850e-47 |
Msa1125150 | Msa1438420 | 0.837049 | 6.535897e-57 | -8.615850e-47 |
Msa1130700 | Msa1438420 | 0.847539 | 1.084705e-59 | -8.615850e-47 |
Msa1131010 | Msa1438420 | 0.828206 | 1.022514e-54 | -8.615850e-47 |
Msa1132320 | Msa1438420 | 0.842747 | 2.140679e-58 | -8.615850e-47 |
Msa1160480 | Msa1438420 | 0.819548 | 1.096351e-52 | -8.615850e-47 |
Msa1168130 | Msa1438420 | 0.806741 | 7.099661e-50 | -8.615850e-47 |
Msa1173410 | Msa1438420 | 0.828839 | 7.193762e-55 | -8.615850e-47 |
Msa1182960 | Msa1438420 | 0.819748 | 9.868618e-53 | -8.615850e-47 |
Msa1186010 | Msa1438420 | 0.829297 | 5.569888e-55 | -8.615850e-47 |
Msa1195860 | Msa1438420 | 0.840241 | 9.787054e-58 | -8.615850e-47 |
Msa1198420 | Msa1438420 | 0.817804 | 2.726226e-52 | -8.615850e-47 |
Msa1199690 | Msa1438420 | 0.839370 | 1.650202e-57 | -8.615850e-47 |
Msa1203090 | Msa1438420 | 0.822935 | 1.814589e-53 | -8.615850e-47 |
Msa1203210 | Msa1438420 | 0.821772 | 3.380981e-53 | -8.615850e-47 |
Msa1211100 | Msa1438420 | 0.800972 | 1.121554e-48 | -8.615850e-47 |
Msa1211120 | Msa1438420 | 0.804913 | 1.719559e-49 | -8.615850e-47 |
Msa1215660 | Msa1438420 | 0.810435 | 1.154168e-50 | -8.615850e-47 |
Msa1218720 | Msa1438420 | 0.836735 | 7.860501e-57 | -8.615850e-47 |
Msa1224150 | Msa1438420 | 0.810210 | 1.290907e-50 | -8.615850e-47 |
Msa0487560 | Msa1438420 | 0.830154 | 3.446280e-55 | -8.615850e-47 |
Msa0487620 | Msa1438420 | 0.823910 | 1.073804e-53 | -8.615850e-47 |
Msa0493640 | Msa1438420 | 0.839681 | 1.369878e-57 | -8.615850e-47 |
Msa0509500 | Msa1438420 | 0.820332 | 7.255115e-53 | -8.615850e-47 |
Msa0509510 | Msa1438420 | 0.808653 | 2.786324e-50 | -8.615850e-47 |
Msa0511910 | Msa1438420 | 0.821153 | 4.696935e-53 | -8.615850e-47 |
Msa0517400 | Msa1438420 | 0.840288 | 9.515212e-58 | -8.615850e-47 |
Msa0521440 | Msa1438420 | 0.837465 | 5.117029e-57 | -8.615850e-47 |
Msa0558890 | Msa1438420 | 0.813727 | 2.210851e-51 | -8.615850e-47 |
Msa0576150 | Msa1438420 | 0.818516 | 1.882017e-52 | -8.615850e-47 |
Msa0577140 | Msa1438420 | 0.818930 | 1.515437e-52 | -8.615850e-47 |
Msa0581440 | Msa1438420 | 0.805719 | 1.165593e-49 | -8.615850e-47 |
Msa0582570 | Msa1438420 | 0.820203 | 7.765281e-53 | -8.615850e-47 |
Msa0582580 | Msa1438420 | 0.812144 | 4.914608e-51 | -8.615850e-47 |
Msa0587060 | Msa1438420 | 0.844963 | 5.457278e-59 | -8.615850e-47 |
Msa0595240 | Msa1438420 | 0.816764 | 4.674581e-52 | -8.615850e-47 |
Msa0855490 | Msa1438420 | 0.831098 | 2.023563e-55 | -8.615850e-47 |
Msa0866960 | Msa1438420 | 0.843135 | 1.688184e-58 | -8.615850e-47 |
Msa0868140 | Msa1438420 | 0.802702 | 4.948030e-49 | -8.615850e-47 |
Msa0906150 | Msa1438420 | 0.813394 | 2.617111e-51 | -8.615850e-47 |
Msa0910650 | Msa1438420 | 0.802215 | 6.236640e-49 | -8.615850e-47 |
Msa0925020 | Msa1438420 | 0.825061 | 5.756448e-54 | -8.615850e-47 |
Msa0967260 | Msa1438420 | 0.807302 | 5.402513e-50 | -8.615850e-47 |
Msa0976950 | Msa1438420 | 0.805728 | 1.160492e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438420 | MtrunA17_Chr8g0386011 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 499 |
Msa1438420 | MtrunA17_Chr3g0131961 | 57.364 | 258 | 97 | 4 | 5 | 253 | 6 | 259 | 1.39e-104 | 304 |
Msa1438420 | MtrunA17_Chr3g0131951 | 50.794 | 252 | 117 | 4 | 1 | 246 | 63 | 313 | 1.44e-86 | 262 |
Msa1438420 | MtrunA17_Chr7g0214181 | 57.870 | 216 | 90 | 1 | 1 | 216 | 1 | 215 | 1.35e-83 | 251 |
Msa1438420 | MtrunA17_Chr7g0215601 | 53.478 | 230 | 106 | 1 | 2 | 231 | 3 | 231 | 4.59e-82 | 246 |
Msa1438420 | MtrunA17_Chr5g0428281 | 56.604 | 212 | 91 | 1 | 5 | 216 | 6 | 216 | 4.76e-82 | 247 |
Msa1438420 | MtrunA17_Chr7g0214191 | 56.481 | 216 | 93 | 1 | 1 | 216 | 1 | 215 | 6.10e-81 | 244 |
Msa1438420 | MtrunA17_Chr5g0444031 | 50.655 | 229 | 112 | 1 | 4 | 232 | 24 | 251 | 4.41e-78 | 237 |
Msa1438420 | MtrunA17_Chr8g0386001 | 47.479 | 238 | 120 | 4 | 5 | 238 | 4 | 240 | 4.66e-71 | 219 |
Msa1438420 | MtrunA17_Chr2g0295681 | 43.182 | 220 | 124 | 1 | 9 | 228 | 5 | 223 | 2.73e-52 | 170 |
Msa1438420 | MtrunA17_Chr3g0119951 | 40.930 | 215 | 126 | 1 | 4 | 217 | 3 | 217 | 8.74e-46 | 154 |
Msa1438420 | MtrunA17_Chr8g0388621 | 38.235 | 238 | 144 | 3 | 11 | 246 | 12 | 248 | 4.94e-45 | 151 |
Msa1438420 | MtrunA17_Chr6g0450941 | 43.842 | 203 | 110 | 3 | 11 | 210 | 83 | 284 | 1.41e-44 | 152 |
Msa1438420 | MtrunA17_Chr3g0125861 | 37.281 | 228 | 135 | 5 | 11 | 233 | 7 | 231 | 2.83e-44 | 149 |
Msa1438420 | MtrunA17_Chr2g0278491 | 47.097 | 155 | 80 | 1 | 56 | 210 | 1 | 153 | 3.23e-44 | 149 |
Msa1438420 | MtrunA17_Chr3g0119991 | 40.816 | 196 | 115 | 1 | 23 | 217 | 1 | 196 | 4.21e-41 | 141 |
Msa1438420 | MtrunA17_Chr8g0359261 | 38.164 | 207 | 124 | 3 | 13 | 217 | 18 | 222 | 6.29e-41 | 140 |
Msa1438420 | MtrunA17_Chr1g0159431 | 35.294 | 221 | 139 | 3 | 10 | 228 | 6 | 224 | 7.43e-40 | 138 |
Msa1438420 | MtrunA17_Chr6g0450951 | 40.426 | 188 | 108 | 3 | 29 | 213 | 5 | 191 | 4.13e-37 | 130 |
Msa1438420 | MtrunA17_Chr1g0158931 | 31.390 | 223 | 150 | 1 | 6 | 225 | 3 | 225 | 1.70e-36 | 129 |
Msa1438420 | MtrunA17_Chr2g0314571 | 33.803 | 213 | 135 | 4 | 13 | 222 | 18 | 227 | 6.32e-36 | 127 |
Msa1438420 | MtrunA17_Chr6g0450931 | 40.212 | 189 | 107 | 5 | 29 | 213 | 5 | 191 | 5.88e-35 | 124 |
Msa1438420 | MtrunA17_Chr4g0059191 | 36.923 | 195 | 120 | 2 | 25 | 217 | 1 | 194 | 2.25e-34 | 122 |
Msa1438420 | MtrunA17_Chr3g0126421 | 30.508 | 236 | 151 | 4 | 13 | 240 | 10 | 240 | 2.94e-33 | 121 |
Msa1438420 | MtrunA17_Chr3g0126411 | 30.833 | 240 | 159 | 4 | 6 | 240 | 3 | 240 | 2.21e-32 | 119 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1438420 | AT5G50800.1 | 57.676 | 241 | 100 | 2 | 1 | 240 | 1 | 240 | 3.69e-94 | 279 |
Msa1438420 | AT5G50790.1 | 53.689 | 244 | 109 | 4 | 1 | 242 | 1 | 242 | 2.43e-91 | 271 |
Msa1438420 | AT3G48740.1 | 54.918 | 244 | 101 | 4 | 4 | 242 | 6 | 245 | 5.70e-88 | 263 |
Msa1438420 | AT5G23660.1 | 54.545 | 242 | 105 | 3 | 4 | 242 | 6 | 245 | 1.32e-87 | 262 |
Msa1438420 | AT5G13170.1 | 55.963 | 218 | 91 | 3 | 9 | 225 | 11 | 224 | 5.51e-85 | 255 |
Msa1438420 | AT4G25010.1 | 52.245 | 245 | 116 | 1 | 1 | 244 | 1 | 245 | 8.03e-85 | 254 |
Msa1438420 | AT2G39060.1 | 49.772 | 219 | 108 | 2 | 9 | 227 | 9 | 225 | 5.56e-75 | 229 |
Msa1438420 | AT4G15920.1 | 42.925 | 212 | 119 | 2 | 9 | 219 | 5 | 215 | 1.30e-53 | 174 |
Msa1438420 | AT3G16690.1 | 41.589 | 214 | 123 | 2 | 9 | 221 | 5 | 217 | 1.72e-53 | 173 |
Msa1438420 | AT3G16690.3 | 41.589 | 214 | 123 | 2 | 9 | 221 | 40 | 252 | 2.49e-53 | 174 |
Msa1438420 | AT5G40260.1 | 40.444 | 225 | 129 | 5 | 10 | 230 | 9 | 232 | 2.61e-46 | 155 |
Msa1438420 | AT5G62850.1 | 39.524 | 210 | 122 | 4 | 11 | 217 | 10 | 217 | 2.75e-45 | 152 |
Msa1438420 | AT1G21460.1 | 36.771 | 223 | 135 | 4 | 11 | 230 | 7 | 226 | 6.69e-42 | 144 |
Msa1438420 | AT4G10850.1 | 37.273 | 220 | 134 | 4 | 11 | 227 | 12 | 230 | 1.17e-41 | 143 |
Msa1438420 | AT5G53190.1 | 34.728 | 239 | 142 | 4 | 13 | 247 | 10 | 238 | 3.07e-41 | 142 |
Msa1438420 | AT5G40260.2 | 42.781 | 187 | 103 | 4 | 10 | 192 | 9 | 195 | 9.89e-40 | 137 |
Msa1438420 | AT3G14770.1 | 35.885 | 209 | 129 | 4 | 11 | 216 | 16 | 222 | 6.83e-38 | 133 |
Msa1438420 | AT1G66770.1 | 34.928 | 209 | 134 | 2 | 11 | 217 | 12 | 220 | 1.41e-37 | 133 |
Msa1438420 | AT5G62850.2 | 38.919 | 185 | 108 | 4 | 11 | 192 | 10 | 192 | 1.25e-36 | 129 |
Msa1438420 | AT3G28007.1 | 36.538 | 208 | 129 | 3 | 13 | 218 | 12 | 218 | 4.11e-34 | 124 |
Msa1438420 | AT1G21460.2 | 37.113 | 194 | 116 | 4 | 11 | 201 | 7 | 197 | 1.58e-33 | 120 |
Msa1438420 | AT3G16690.2 | 37.671 | 146 | 89 | 2 | 9 | 153 | 5 | 149 | 3.54e-25 | 99.0 |
Find 86 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAAAACTATTTGTAAATTT+TGG | 0.086099 | tig0028546:-38052 | Msa1438420:intergenic |
GTGTATACCCTTTGTTTCTT+TGG | 0.184748 | tig0028546:-38943 | Msa1438420:intergenic |
CTTCTCTTGCTGAATGTGTT+TGG | 0.204848 | tig0028546:+39104 | Msa1438420:CDS |
ATGAGGTAAAAGAGTGTAAT+AGG | 0.205348 | tig0028546:+37720 | Msa1438420:five_prime_UTR |
TGTATACCCTTTGTTTCTTT+GGG | 0.209074 | tig0028546:-38942 | Msa1438420:intergenic |
GTTTCTTTGGGGCATAAATT+AGG | 0.220003 | tig0028546:-38930 | Msa1438420:intergenic |
AACAATTCCAAAAGTGTTAA+TGG | 0.230115 | tig0028546:-38881 | Msa1438420:intergenic |
CTTATCACCATTAACACTTT+TGG | 0.238695 | tig0028546:+38874 | Msa1438420:CDS |
ACGTAGTAGTAGTACAATTA+TGG | 0.252437 | tig0028546:-40206 | Msa1438420:intergenic |
GAAATCTGCTGAGGGATTTC+AGG | 0.262581 | tig0028546:+38771 | Msa1438420:CDS |
TTCTCTTGCTGAATGTGTTT+GGG | 0.283443 | tig0028546:+39105 | Msa1438420:CDS |
TCTTCTATGGCCTTCTCCTC+AGG | 0.284550 | tig0028546:+39458 | Msa1438420:CDS |
TTGCTGAATGTGTTTGGGTT+TGG | 0.294795 | tig0028546:+39110 | Msa1438420:CDS |
TGATTTAAATTCGGTGTAAT+TGG | 0.311398 | tig0028546:+40116 | Msa1438420:three_prime_UTR |
GCTGTTATGTGGTTCTTCTA+TGG | 0.316301 | tig0028546:+39445 | Msa1438420:CDS |
TTATATGAAATTGAAAGTTT+AGG | 0.337684 | tig0028546:-40021 | Msa1438420:intergenic |
ATAATTGATGTTGTGAAGAT+TGG | 0.346357 | tig0028546:+39896 | Msa1438420:CDS |
ATAGCAATATTTCTAAGCTT+TGG | 0.359986 | tig0028546:+40165 | Msa1438420:three_prime_UTR |
TTGGATAGTGAATGGCGTTT+GGG | 0.373677 | tig0028546:+37757 | Msa1438420:five_prime_UTR |
TGGCCATGACTCGTGAATCT+TGG | 0.380436 | tig0028546:+38091 | Msa1438420:CDS |
CTCAACTCTTGACCCTTCAT+TGG | 0.382813 | tig0028546:-39863 | Msa1438420:intergenic |
GGCACCTCCACCTGCACGAT+TGG | 0.385028 | tig0028546:-39927 | Msa1438420:intergenic |
GGCCATGACTCGTGAATCTT+GGG | 0.392828 | tig0028546:+38092 | Msa1438420:CDS |
GCACCTCCACCTGCACGATT+GGG | 0.405651 | tig0028546:-39926 | Msa1438420:intergenic |
AACACACTTGGATTTGTGTT+CGG | 0.406416 | tig0028546:+39782 | Msa1438420:CDS |
TTTGAGATAGCTTGAATTGA+GGG | 0.410396 | tig0028546:+37975 | Msa1438420:five_prime_UTR |
GAGAGGGGTTTATGTTGAAA+TGG | 0.411692 | tig0028546:+37687 | None:intergenic |
GAACCACATAACAGCATTGA+TGG | 0.426987 | tig0028546:-39437 | Msa1438420:intergenic |
TTATTATATTCAAGAAGAAA+TGG | 0.427125 | tig0028546:+38071 | Msa1438420:exon |
TTTGGATAGTGAATGGCGTT+TGG | 0.427726 | tig0028546:+37756 | Msa1438420:five_prime_UTR |
AACACAAATCCAAGTGTGTT+TGG | 0.437116 | tig0028546:-39779 | Msa1438420:intergenic |
CGTAGTAGTAGTACAATTAT+GGG | 0.439103 | tig0028546:-40205 | Msa1438420:intergenic |
CTGAAAAGTGCCACAACATA+AGG | 0.441782 | tig0028546:-38799 | Msa1438420:intergenic |
CTTCTATGGCCTTCTCCTCA+GGG | 0.446491 | tig0028546:+39459 | Msa1438420:CDS |
GCAAAACGTCTTGCTATCAT+AGG | 0.455733 | tig0028546:+39170 | Msa1438420:CDS |
TTTAACAATCGAGTACATTC+GGG | 0.465861 | tig0028546:+39966 | Msa1438420:three_prime_UTR |
AAAGGTGTGTGATTTAAATT+CGG | 0.469972 | tig0028546:+40107 | Msa1438420:three_prime_UTR |
TAATATTGTAAAATGTAAGA+AGG | 0.481115 | tig0028546:+40041 | Msa1438420:three_prime_UTR |
TAACCATCAATGCTGTTATG+TGG | 0.489473 | tig0028546:+39434 | Msa1438420:CDS |
GAAATGGTTTAAACCAAATG+AGG | 0.494067 | tig0028546:+37703 | Msa1438420:five_prime_UTR |
GGTGGTAGAGGCACCAATGA+AGG | 0.494736 | tig0028546:+39850 | Msa1438420:CDS |
TCAGGCACTTCCTTATGTTG+TGG | 0.494964 | tig0028546:+38789 | Msa1438420:CDS |
CATAGTAATCCCTGAGGAGA+AGG | 0.500559 | tig0028546:-39468 | Msa1438420:intergenic |
TGAGGTAAAAGAGTGTAATA+GGG | 0.504441 | tig0028546:+37721 | Msa1438420:five_prime_UTR |
AGGCAACATCATTTCCTTTG+CGG | 0.507976 | tig0028546:+38613 | Msa1438420:intron |
TTCATTGGTGCCTCTACCAC+CGG | 0.508469 | tig0028546:-39848 | Msa1438420:intergenic |
AAATGCTACACCGGTGGTAG+AGG | 0.509728 | tig0028546:+39838 | Msa1438420:CDS |
CCATGCAGAGCAAAGTCATA+AGG | 0.515167 | tig0028546:+39368 | Msa1438420:intron |
GACCCCAATCGTGCAGGTGG+AGG | 0.519554 | tig0028546:+39923 | Msa1438420:CDS |
AAGTGTATTTGGATAGTGAA+TGG | 0.521217 | tig0028546:+37749 | Msa1438420:five_prime_UTR |
GTATACCCTTTGTTTCTTTG+GGG | 0.522852 | tig0028546:-38941 | Msa1438420:intergenic |
AATATTGTAAAATGTAAGAA+GGG | 0.533305 | tig0028546:+40042 | Msa1438420:three_prime_UTR |
AGCCCAAGATTCACGAGTCA+TGG | 0.538849 | tig0028546:-38094 | Msa1438420:intergenic |
TCAACTCTCTACCTCTCAAA+GGG | 0.539975 | tig0028546:+39146 | Msa1438420:CDS |
TATGGGAGTGTTACGATACA+TGG | 0.541540 | tig0028546:-40188 | Msa1438420:intergenic |
TTAAAATCAGACTTTGCTAA+CGG | 0.544654 | tig0028546:-39948 | Msa1438420:intergenic |
TAAGAAGGGTGCTTAGCCTC+TGG | 0.546917 | tig0028546:+40056 | Msa1438420:three_prime_UTR |
TTCAAGAAGAAATCTGCTGA+GGG | 0.551711 | tig0028546:+38763 | Msa1438420:CDS |
TGTGTTCGGCATAATTCAGA+TGG | 0.552676 | tig0028546:+39796 | Msa1438420:CDS |
ATCAACTCTCTACCTCTCAA+AGG | 0.553313 | tig0028546:+39145 | Msa1438420:CDS |
GGAAACGACCCCAATCGTGC+AGG | 0.560744 | tig0028546:+39917 | Msa1438420:CDS |
TTTATGCCCCAAAGAAACAA+AGG | 0.567569 | tig0028546:+38935 | Msa1438420:CDS |
AACGACCCCAATCGTGCAGG+TGG | 0.576027 | tig0028546:+39920 | Msa1438420:CDS |
TTATGCCCCAAAGAAACAAA+GGG | 0.578048 | tig0028546:+38936 | Msa1438420:CDS |
AACGTCTTGCTATCATAGGA+TGG | 0.590309 | tig0028546:+39174 | Msa1438420:CDS |
GTGGTAGAGGCACCAATGAA+GGG | 0.591402 | tig0028546:+39851 | Msa1438420:CDS |
ATGCAGCTACCAAACACACT+TGG | 0.593312 | tig0028546:+39770 | Msa1438420:intron |
CTTCAAGAAGAAATCTGCTG+AGG | 0.593379 | tig0028546:+38762 | Msa1438420:CDS |
ATTCTATGCATATCGACTCG+TGG | 0.599423 | tig0028546:+37925 | Msa1438420:intron |
CACCTCCACCTGCACGATTG+GGG | 0.600426 | tig0028546:-39925 | Msa1438420:intergenic |
GAACATCGATTACGTATACA+AGG | 0.615675 | tig0028546:-40293 | Msa1438420:intergenic |
CAAACACATTCAGCAAGAGA+AGG | 0.625179 | tig0028546:-39103 | Msa1438420:intergenic |
AAACTAAATACTTATACCAG+AGG | 0.635792 | tig0028546:-40072 | Msa1438420:intergenic |
GATATATAGAAATGCTACAC+CGG | 0.637638 | tig0028546:+39829 | Msa1438420:CDS |
GTAGAGAGTTGATAGAAGCA+TGG | 0.638407 | tig0028546:-39135 | Msa1438420:intergenic |
ATACTTACAATGACGAAGAG+AGG | 0.639522 | tig0028546:-39233 | Msa1438420:intergenic |
ATACACTTATGTTGAAAACA+AGG | 0.640633 | tig0028546:-39202 | Msa1438420:intergenic |
TGGTGAGAGGAACACCGCAA+AGG | 0.662139 | tig0028546:-38627 | Msa1438420:intergenic |
GTTCGGCATAATTCAGATGG+TGG | 0.664212 | tig0028546:+39799 | Msa1438420:CDS |
TGGTTACTTACAATGGTGAG+AGG | 0.666494 | tig0028546:-38640 | Msa1438420:intergenic |
CTTGAAATGAGTTTGACTGA+GGG | 0.667963 | tig0028546:-40261 | Msa1438420:intergenic |
AAGGGTCAAGAGTTGAGTGG+TGG | 0.679444 | tig0028546:+39869 | Msa1438420:CDS |
ACTTGAAATGAGTTTGACTG+AGG | 0.693520 | tig0028546:-40262 | Msa1438420:intergenic |
ATATAGAAATGCTACACCGG+TGG | 0.693921 | tig0028546:+39832 | Msa1438420:CDS |
ATGAAGGGTCAAGAGTTGAG+TGG | 0.696772 | tig0028546:+39866 | Msa1438420:CDS |
CGGCAACATAGTAATCCCTG+AGG | 0.770046 | tig0028546:-39474 | Msa1438410:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAACTATTTGTAAATTT+TGG | - | tig0028546:38055-38074 | Msa1438420:intergenic | 10.0% |
!! | AAAAAATCAAATATATATGT+AGG | + | tig0028546:38516-38535 | Msa1438420:intron | 10.0% |
!! | ATATATACATATATACATTT+AGG | - | tig0028546:38712-38731 | Msa1438420:intergenic | 10.0% |
!!! | TAGTAAAGTTTTTTTTTATA+AGG | - | tig0028546:39018-39037 | Msa1438420:intergenic | 10.0% |
!! | TATCAAATATTAAAGTTAAA+GGG | - | tig0028546:39558-39577 | Msa1438420:intergenic | 10.0% |
!! | TTATCAAATATTAAAGTTAA+AGG | - | tig0028546:39559-39578 | Msa1438420:intergenic | 10.0% |
!!! | TAGTTTTATTATTAATGTAA+AGG | + | tig0028546:40089-40108 | Msa1438420:three_prime_UTR | 10.0% |
!!! | AGTTTAGTGTTTTAAATTAA+AGG | + | tig0028546:37797-37816 | Msa1438420:intron | 15.0% |
!! | TTATTATATTCAAGAAGAAA+TGG | + | tig0028546:38071-38090 | Msa1438420:exon | 15.0% |
!!! | ATTTTAATTAGCATGTTAAT+TGG | + | tig0028546:38391-38410 | Msa1438420:intron | 15.0% |
!! | TAATTTACAAGAAAACAAAA+TGG | - | tig0028546:38663-38682 | Msa1438420:intergenic | 15.0% |
!!! | ATTATATGAATATTGACTTA+CGG | - | tig0028546:39497-39516 | Msa1438420:intergenic | 15.0% |
!!! | AATTAGAAAACTTTTCATAT+AGG | + | tig0028546:39704-39723 | Msa1438420:intron | 15.0% |
!! | TTATATGAAATTGAAAGTTT+AGG | - | tig0028546:40024-40043 | Msa1438420:intergenic | 15.0% |
!! | TAATATTGTAAAATGTAAGA+AGG | + | tig0028546:40041-40060 | Msa1438420:three_prime_UTR | 15.0% |
!! | AATATTGTAAAATGTAAGAA+GGG | + | tig0028546:40042-40061 | Msa1438420:three_prime_UTR | 15.0% |
!!! | TTCTAGTTTCTTTTTATAAG+CGG | + | tig0028546:38268-38287 | Msa1438420:intron | 20.0% |
!!! | AAAAGCTAACGTTAAATTTT+AGG | - | tig0028546:38345-38364 | Msa1438420:intergenic | 20.0% |
!! | ATGTATATATTTGTATATGC+AGG | + | tig0028546:38722-38741 | Msa1438420:intron | 20.0% |
!! | TATCACTTACTCATTTAATT+GGG | - | tig0028546:39316-39335 | Msa1438420:intergenic | 20.0% |
!! | TTATCACTTACTCATTTAAT+TGG | - | tig0028546:39317-39336 | Msa1438420:intergenic | 20.0% |
!! | GTTAACGTAATTAAGAAAAT+TGG | - | tig0028546:39679-39698 | Msa1438420:intergenic | 20.0% |
!!! | ATTGAATCTTTTCTTCTTTT+TGG | + | tig0028546:39742-39761 | Msa1438420:intron | 20.0% |
!! | ATAGGGTTAAAAAGTGTATT+TGG | + | tig0028546:37738-37757 | Msa1438420:five_prime_UTR | 25.0% |
! | AATAATATATGCATGGCTTA+TGG | - | tig0028546:38159-38178 | Msa1438420:intergenic | 25.0% |
! | GAAAAGCAATAATATATGCA+TGG | - | tig0028546:38166-38185 | Msa1438420:intergenic | 25.0% |
! | GAAGATGATATTGATGAATA+AGG | - | tig0028546:38251-38270 | Msa1438420:intergenic | 25.0% |
!!! | ATTTTACTCTAAAGAACGTT+TGG | - | tig0028546:38373-38392 | Msa1438420:intergenic | 25.0% |
! | AATCTGTATGTATGTTAACA+CGG | - | tig0028546:38419-38438 | Msa1438420:intergenic | 25.0% |
!!! | CTTTTTGTCATTGTTTTTAC+AGG | + | tig0028546:38593-38612 | Msa1438420:intron | 25.0% |
! | AACAAAATGGTTACTTACAA+TGG | - | tig0028546:38650-38669 | Msa1438420:intergenic | 25.0% |
! | TTGAAGATTACGTAAAAAGT+TGG | - | tig0028546:38748-38767 | Msa1438420:intergenic | 25.0% |
!!! | AACAATTCCAAAAGTGTTAA+TGG | - | tig0028546:38884-38903 | Msa1438420:intergenic | 25.0% |
! | ATACACTTATGTTGAAAACA+AGG | - | tig0028546:39205-39224 | Msa1438420:intergenic | 25.0% |
! | AAAAAGAAGGACAAGAAAAA+TGG | - | tig0028546:39415-39434 | Msa1438420:intergenic | 25.0% |
! | CATACAAAGTACAAACAAAT+GGG | - | tig0028546:39527-39546 | Msa1438420:intergenic | 25.0% |
! | TTTAATGTGCTTCATTAATG+TGG | + | tig0028546:39610-39629 | Msa1438420:intron | 25.0% |
! | GTAATTAAGAAAATTGGTAG+GGG | - | tig0028546:39673-39692 | Msa1438420:intergenic | 25.0% |
! | CGTAATTAAGAAAATTGGTA+GGG | - | tig0028546:39674-39693 | Msa1438420:intergenic | 25.0% |
! | ACGTAATTAAGAAAATTGGT+AGG | - | tig0028546:39675-39694 | Msa1438420:intergenic | 25.0% |
! | ATAATTGATGTTGTGAAGAT+TGG | + | tig0028546:39896-39915 | Msa1438420:CDS | 25.0% |
! | TTAAAATCAGACTTTGCTAA+CGG | - | tig0028546:39951-39970 | Msa1438420:intergenic | 25.0% |
!! | TTTTAACAATCGAGTACATT+CGG | + | tig0028546:39965-39984 | Msa1438420:three_prime_UTR | 25.0% |
! | AAACTAAATACTTATACCAG+AGG | - | tig0028546:40075-40094 | Msa1438420:intergenic | 25.0% |
!! | AAAGGTGTGTGATTTAAATT+CGG | + | tig0028546:40107-40126 | Msa1438420:three_prime_UTR | 25.0% |
!!! | TGATTTAAATTCGGTGTAAT+TGG | + | tig0028546:40116-40135 | Msa1438420:three_prime_UTR | 25.0% |
!! | ATAGCAATATTTCTAAGCTT+TGG | + | tig0028546:40165-40184 | Msa1438420:three_prime_UTR | 25.0% |
!! | CAATTCGTTTTCATTAATAC+TGG | - | tig0028546:40318-40337 | Msa1438420:intergenic | 25.0% |
!!! | TGTTTTAGTAATTTTGTCGT+TGG | + | tig0028546:40336-40355 | Msa1438420:three_prime_UTR | 25.0% |
!!! | GTTTTAGTAATTTTGTCGTT+GGG | + | tig0028546:40337-40356 | Msa1438420:three_prime_UTR | 25.0% |
GAAATGGTTTAAACCAAATG+AGG | + | tig0028546:37703-37722 | Msa1438420:five_prime_UTR | 30.0% | |
! | TTACACTCTTTTACCTCATT+TGG | - | tig0028546:37719-37738 | Msa1438420:intergenic | 30.0% |
! | ATGAGGTAAAAGAGTGTAAT+AGG | + | tig0028546:37720-37739 | Msa1438420:five_prime_UTR | 30.0% |
! | TGAGGTAAAAGAGTGTAATA+GGG | + | tig0028546:37721-37740 | Msa1438420:five_prime_UTR | 30.0% |
AAGTGTATTTGGATAGTGAA+TGG | + | tig0028546:37749-37768 | Msa1438420:five_prime_UTR | 30.0% | |
!!! | TTTTGAGATAGCTTGAATTG+AGG | + | tig0028546:37974-37993 | Msa1438420:five_prime_UTR | 30.0% |
! | TTTGAGATAGCTTGAATTGA+GGG | + | tig0028546:37975-37994 | Msa1438420:five_prime_UTR | 30.0% |
TGATATTGATGAATAAGGAG+AGG | - | tig0028546:38246-38265 | Msa1438420:intergenic | 30.0% | |
!! | ATCTAGTTTGTTATGCTTGT+TGG | + | tig0028546:38300-38319 | Msa1438420:intron | 30.0% |
TAACATACATACAGATTGCA+TGG | + | tig0028546:38422-38441 | Msa1438420:intron | 30.0% | |
! | CTTATCACCATTAACACTTT+TGG | + | tig0028546:38874-38893 | Msa1438420:CDS | 30.0% |
! | TGTATACCCTTTGTTTCTTT+GGG | - | tig0028546:38945-38964 | Msa1438420:intergenic | 30.0% |
!! | AGCATTGATGGTTAAAAAGA+AGG | - | tig0028546:39428-39447 | Msa1438420:intergenic | 30.0% |
CCATACAAAGTACAAACAAA+TGG | - | tig0028546:39528-39547 | Msa1438420:intergenic | 30.0% | |
CCATTTGTTTGTACTTTGTA+TGG | + | tig0028546:39525-39544 | Msa1438420:intron | 30.0% | |
! | CACTTAGATGTTTCTTTTCA+TGG | - | tig0028546:39641-39660 | Msa1438420:intergenic | 30.0% |
AGAAACATCTAAGTGCTATA+TGG | + | tig0028546:39646-39665 | Msa1438420:intron | 30.0% | |
GATATATAGAAATGCTACAC+CGG | + | tig0028546:39829-39848 | Msa1438420:CDS | 30.0% | |
TTTAACAATCGAGTACATTC+GGG | + | tig0028546:39966-39985 | Msa1438420:three_prime_UTR | 30.0% | |
CGTAGTAGTAGTACAATTAT+GGG | - | tig0028546:40208-40227 | Msa1438420:intergenic | 30.0% | |
ACGTAGTAGTAGTACAATTA+TGG | - | tig0028546:40209-40228 | Msa1438420:intergenic | 30.0% | |
!!! | GAATCTTGGGCTTTTGTTTT+CGG | + | tig0028546:38105-38124 | Msa1438420:CDS | 35.0% |
!!! | GCTTTTGTTTTCGGCATTAT+AGG | + | tig0028546:38114-38133 | Msa1438420:CDS | 35.0% |
!! | CATTTGTTAACAAGTGCTGA+TGG | + | tig0028546:38555-38574 | Msa1438420:intron | 35.0% |
TTCAAGAAGAAATCTGCTGA+GGG | + | tig0028546:38763-38782 | Msa1438420:CDS | 35.0% | |
!! | GTTTCTTTGGGGCATAAATT+AGG | - | tig0028546:38933-38952 | Msa1438420:intergenic | 35.0% |
TTTATGCCCCAAAGAAACAA+AGG | + | tig0028546:38935-38954 | Msa1438420:CDS | 35.0% | |
TTATGCCCCAAAGAAACAAA+GGG | + | tig0028546:38936-38955 | Msa1438420:CDS | 35.0% | |
! | GTATACCCTTTGTTTCTTTG+GGG | - | tig0028546:38944-38963 | Msa1438420:intergenic | 35.0% |
! | GTGTATACCCTTTGTTTCTT+TGG | - | tig0028546:38946-38965 | Msa1438420:intergenic | 35.0% |
TTCTCTTGCTGAATGTGTTT+GGG | + | tig0028546:39105-39124 | Msa1438420:CDS | 35.0% | |
ATACTTACAATGACGAAGAG+AGG | - | tig0028546:39236-39255 | Msa1438420:intergenic | 35.0% | |
TAACCATCAATGCTGTTATG+TGG | + | tig0028546:39434-39453 | Msa1438420:CDS | 35.0% | |
AACACAAATCCAAGTGTGTT+TGG | - | tig0028546:39782-39801 | Msa1438420:intergenic | 35.0% | |
AACACACTTGGATTTGTGTT+CGG | + | tig0028546:39782-39801 | Msa1438420:CDS | 35.0% | |
! | TTCGGTGTAATTGGCAAAAA+TGG | + | tig0028546:40125-40144 | Msa1438420:three_prime_UTR | 35.0% |
CTTGAAATGAGTTTGACTGA+GGG | - | tig0028546:40264-40283 | Msa1438420:intergenic | 35.0% | |
ACTTGAAATGAGTTTGACTG+AGG | - | tig0028546:40265-40284 | Msa1438420:intergenic | 35.0% | |
! | GAACATCGATTACGTATACA+AGG | - | tig0028546:40296-40315 | Msa1438420:intergenic | 35.0% |
TTTGGATAGTGAATGGCGTT+TGG | + | tig0028546:37756-37775 | Msa1438420:five_prime_UTR | 40.0% | |
TTGGATAGTGAATGGCGTTT+GGG | + | tig0028546:37757-37776 | Msa1438420:five_prime_UTR | 40.0% | |
AAGTACACACTAGTTGAGCA+TGG | - | tig0028546:37881-37900 | Msa1438420:intergenic | 40.0% | |
!! | ATTCTATGCATATCGACTCG+TGG | + | tig0028546:37925-37944 | Msa1438420:intron | 40.0% |
ATACAGATTGCATGGCGATA+TGG | + | tig0028546:38430-38449 | Msa1438420:intron | 40.0% | |
AGGCAACATCATTTCCTTTG+CGG | + | tig0028546:38613-38632 | Msa1438420:intron | 40.0% | |
TGGTTACTTACAATGGTGAG+AGG | - | tig0028546:38643-38662 | Msa1438420:intergenic | 40.0% | |
CTTCAAGAAGAAATCTGCTG+AGG | + | tig0028546:38762-38781 | Msa1438420:CDS | 40.0% | |
!! | CTGAAAAGTGCCACAACATA+AGG | - | tig0028546:38802-38821 | Msa1438420:intergenic | 40.0% |
! | CACTTTTCAGTGCAATGCTT+TGG | + | tig0028546:38812-38831 | Msa1438420:CDS | 40.0% |
! | CAGCAAGAGAAGGAGTTTTA+TGG | - | tig0028546:39096-39115 | Msa1438420:intergenic | 40.0% |
CAAACACATTCAGCAAGAGA+AGG | - | tig0028546:39106-39125 | Msa1438420:intergenic | 40.0% | |
CTTCTCTTGCTGAATGTGTT+TGG | + | tig0028546:39104-39123 | Msa1438420:CDS | 40.0% | |
! | TTGCTGAATGTGTTTGGGTT+TGG | + | tig0028546:39110-39129 | Msa1438420:CDS | 40.0% |
!! | GTAGAGAGTTGATAGAAGCA+TGG | - | tig0028546:39138-39157 | Msa1438420:intergenic | 40.0% |
ATCAACTCTCTACCTCTCAA+AGG | + | tig0028546:39145-39164 | Msa1438420:CDS | 40.0% | |
TCAACTCTCTACCTCTCAAA+GGG | + | tig0028546:39146-39165 | Msa1438420:CDS | 40.0% | |
! | GCAAAACGTCTTGCTATCAT+AGG | + | tig0028546:39170-39189 | Msa1438420:CDS | 40.0% |
! | AACGTCTTGCTATCATAGGA+TGG | + | tig0028546:39174-39193 | Msa1438420:CDS | 40.0% |
! | GAACCACATAACAGCATTGA+TGG | - | tig0028546:39440-39459 | Msa1438420:intergenic | 40.0% |
GCTGTTATGTGGTTCTTCTA+TGG | + | tig0028546:39445-39464 | Msa1438420:CDS | 40.0% | |
TGTGTTCGGCATAATTCAGA+TGG | + | tig0028546:39796-39815 | Msa1438420:CDS | 40.0% | |
ATATAGAAATGCTACACCGG+TGG | + | tig0028546:39832-39851 | Msa1438420:CDS | 40.0% | |
!! | TATGGGAGTGTTACGATACA+TGG | - | tig0028546:40191-40210 | Msa1438420:intergenic | 40.0% |
GAAATCTGCTGAGGGATTTC+AGG | + | tig0028546:38771-38790 | Msa1438420:CDS | 45.0% | |
TCAGGCACTTCCTTATGTTG+TGG | + | tig0028546:38789-38808 | Msa1438420:CDS | 45.0% | |
CCTTATGACTTTGCTCTGCA+TGG | - | tig0028546:39371-39390 | Msa1438420:intergenic | 45.0% | |
CCATGCAGAGCAAAGTCATA+AGG | + | tig0028546:39368-39387 | Msa1438420:intron | 45.0% | |
CATAGTAATCCCTGAGGAGA+AGG | - | tig0028546:39471-39490 | Msa1438420:intergenic | 45.0% | |
ATGCAGCTACCAAACACACT+TGG | + | tig0028546:39770-39789 | Msa1438420:intron | 45.0% | |
GTTCGGCATAATTCAGATGG+TGG | + | tig0028546:39799-39818 | Msa1438420:CDS | 45.0% | |
CTCAACTCTTGACCCTTCAT+TGG | - | tig0028546:39866-39885 | Msa1438420:intergenic | 45.0% | |
ATGAAGGGTCAAGAGTTGAG+TGG | + | tig0028546:39866-39885 | Msa1438420:CDS | 45.0% | |
!! | TTCAAAAAAATAAATATTAA+AGG | + | tig0028546:37820-37839 | Msa1438420:intron | 5.0% |
! | TGGCGTTTGGGATGAACAAC+TGG | + | tig0028546:37769-37788 | Msa1438420:intron | 50.0% |
TGGCCATGACTCGTGAATCT+TGG | + | tig0028546:38091-38110 | Msa1438420:CDS | 50.0% | |
GGCCATGACTCGTGAATCTT+GGG | + | tig0028546:38092-38111 | Msa1438420:CDS | 50.0% | |
AGCCCAAGATTCACGAGTCA+TGG | - | tig0028546:38097-38116 | Msa1438420:intergenic | 50.0% | |
! | GACGTTTTGCTCCCTTTGAG+AGG | - | tig0028546:39160-39179 | Msa1438420:intergenic | 50.0% |
TCTTCTATGGCCTTCTCCTC+AGG | + | tig0028546:39458-39477 | Msa1438420:CDS | 50.0% | |
CTTCTATGGCCTTCTCCTCA+GGG | + | tig0028546:39459-39478 | Msa1438420:CDS | 50.0% | |
CGGCAACATAGTAATCCCTG+AGG | - | tig0028546:39477-39496 | Msa1438420:intergenic | 50.0% | |
AAATGCTACACCGGTGGTAG+AGG | + | tig0028546:39838-39857 | Msa1438420:CDS | 50.0% | |
! | TTCATTGGTGCCTCTACCAC+CGG | - | tig0028546:39851-39870 | Msa1438420:intergenic | 50.0% |
!! | GTGGTAGAGGCACCAATGAA+GGG | + | tig0028546:39851-39870 | Msa1438420:CDS | 50.0% |
AAGGGTCAAGAGTTGAGTGG+TGG | + | tig0028546:39869-39888 | Msa1438420:CDS | 50.0% | |
!! | TAAGAAGGGTGCTTAGCCTC+TGG | + | tig0028546:40056-40075 | Msa1438420:three_prime_UTR | 50.0% |
TGGTGAGAGGAACACCGCAA+AGG | - | tig0028546:38630-38649 | Msa1438420:intergenic | 55.0% | |
!! | GGTGGTAGAGGCACCAATGA+AGG | + | tig0028546:39850-39869 | Msa1438420:CDS | 55.0% |
GGAAACGACCCCAATCGTGC+AGG | + | tig0028546:39917-39936 | Msa1438420:CDS | 60.0% | |
AACGACCCCAATCGTGCAGG+TGG | + | tig0028546:39920-39939 | Msa1438420:CDS | 60.0% | |
CACCTCCACCTGCACGATTG+GGG | - | tig0028546:39928-39947 | Msa1438420:intergenic | 60.0% | |
GCACCTCCACCTGCACGATT+GGG | - | tig0028546:39929-39948 | Msa1438420:intergenic | 60.0% | |
GACCCCAATCGTGCAGGTGG+AGG | + | tig0028546:39923-39942 | Msa1438420:CDS | 65.0% | |
GGCACCTCCACCTGCACGAT+TGG | - | tig0028546:39930-39949 | Msa1438420:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0028546 | gene | 37689 | 40389 | 37689 | ID=Msa1438420;Name=Msa1438420 |
tig0028546 | mRNA | 37689 | 40389 | 37689 | ID=Msa1438420-mRNA-1;Parent=Msa1438420;Name=Msa1438420-mRNA-1;_AED=0.08;_eAED=0.08;_QI=243|1|1|1|0.83|0.71|7|425|255 |
tig0028546 | exon | 37689 | 37777 | 37689 | ID=Msa1438420-mRNA-1:exon:11240;Parent=Msa1438420-mRNA-1 |
tig0028546 | exon | 37936 | 38135 | 37936 | ID=Msa1438420-mRNA-1:exon:11241;Parent=Msa1438420-mRNA-1 |
tig0028546 | exon | 38615 | 38651 | 38615 | ID=Msa1438420-mRNA-1:exon:11242;Parent=Msa1438420-mRNA-1 |
tig0028546 | exon | 38744 | 38957 | 38744 | ID=Msa1438420-mRNA-1:exon:11243;Parent=Msa1438420-mRNA-1 |
tig0028546 | exon | 39086 | 39247 | 39086 | ID=Msa1438420-mRNA-1:exon:11244;Parent=Msa1438420-mRNA-1 |
tig0028546 | exon | 39376 | 39495 | 39376 | ID=Msa1438420-mRNA-1:exon:11245;Parent=Msa1438420-mRNA-1 |
tig0028546 | exon | 39776 | 40389 | 39776 | ID=Msa1438420-mRNA-1:exon:11246;Parent=Msa1438420-mRNA-1 |
tig0028546 | five_prime_UTR | 37689 | 37777 | 37689 | ID=Msa1438420-mRNA-1:five_prime_utr;Parent=Msa1438420-mRNA-1 |
tig0028546 | five_prime_UTR | 37936 | 38089 | 37936 | ID=Msa1438420-mRNA-1:five_prime_utr;Parent=Msa1438420-mRNA-1 |
tig0028546 | CDS | 38090 | 38135 | 38090 | ID=Msa1438420-mRNA-1:cds;Parent=Msa1438420-mRNA-1 |
tig0028546 | CDS | 38615 | 38651 | 38615 | ID=Msa1438420-mRNA-1:cds;Parent=Msa1438420-mRNA-1 |
tig0028546 | CDS | 38744 | 38957 | 38744 | ID=Msa1438420-mRNA-1:cds;Parent=Msa1438420-mRNA-1 |
tig0028546 | CDS | 39086 | 39247 | 39086 | ID=Msa1438420-mRNA-1:cds;Parent=Msa1438420-mRNA-1 |
tig0028546 | CDS | 39376 | 39495 | 39376 | ID=Msa1438420-mRNA-1:cds;Parent=Msa1438420-mRNA-1 |
tig0028546 | CDS | 39776 | 39964 | 39776 | ID=Msa1438420-mRNA-1:cds;Parent=Msa1438420-mRNA-1 |
tig0028546 | three_prime_UTR | 39965 | 40389 | 39965 | ID=Msa1438420-mRNA-1:three_prime_utr;Parent=Msa1438420-mRNA-1 |
Gene Sequence |
Protein sequence |