Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380540 | AET02655.1 | 89.691 | 97 | 3 | 1 | 15 | 104 | 1 | 97 | 2.91e-54 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380540 | sp|B5LMP5|RK33_CICAR | 96.667 | 60 | 2 | 0 | 46 | 105 | 7 | 66 | 2.77e-37 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380540 | G7L7R4 | 89.691 | 97 | 3 | 1 | 15 | 104 | 1 | 97 | 1.39e-54 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa1380540 | 0.830660 | 2.591123e-55 | -8.615850e-47 |
| Msa0030710 | Msa1380540 | 0.828112 | 1.077275e-54 | -8.615850e-47 |
| Msa0034800 | Msa1380540 | 0.845530 | 3.834329e-59 | -8.615850e-47 |
| Msa0035090 | Msa1380540 | 0.825829 | 3.786017e-54 | -8.615850e-47 |
| Msa0039200 | Msa1380540 | 0.852401 | 4.728544e-61 | -8.615850e-47 |
| Msa0040190 | Msa1380540 | 0.848432 | 6.152347e-60 | -8.615850e-47 |
| Msa0065190 | Msa1380540 | 0.839013 | 2.041740e-57 | -8.615850e-47 |
| Msa0076280 | Msa1380540 | 0.805991 | 1.021520e-49 | -8.615850e-47 |
| Msa0083200 | Msa1380540 | 0.816068 | 6.690145e-52 | -8.615850e-47 |
| Msa0083570 | Msa1380540 | 0.830562 | 2.739044e-55 | -8.615850e-47 |
| Msa0084550 | Msa1380540 | 0.827538 | 1.480752e-54 | -8.615850e-47 |
| Msa0086820 | Msa1380540 | 0.847562 | 1.069040e-59 | -8.615850e-47 |
| Msa0087880 | Msa1380540 | 0.864018 | 1.644352e-64 | -8.615850e-47 |
| Msa0092750 | Msa1380540 | 0.816938 | 4.271844e-52 | -8.615850e-47 |
| Msa0095140 | Msa1380540 | 0.946177 | 7.578775e-105 | -8.615850e-47 |
| Msa0095190 | Msa1380540 | 0.813440 | 2.557515e-51 | -8.615850e-47 |
| Msa0095200 | Msa1380540 | 0.807959 | 3.916585e-50 | -8.615850e-47 |
| Msa0095240 | Msa1380540 | 0.933836 | 1.021153e-95 | -8.615850e-47 |
| Msa0095270 | Msa1380540 | 0.944401 | 2.088045e-103 | -8.615850e-47 |
| Msa0099830 | Msa1380540 | 0.844154 | 9.012391e-59 | -8.615850e-47 |
| Msa0114960 | Msa1380540 | 0.807706 | 4.433325e-50 | -8.615850e-47 |
| Msa1351560 | Msa1380540 | 0.832242 | 1.057258e-55 | -8.615850e-47 |
| Msa1354850 | Msa1380540 | 0.945315 | 3.845800e-104 | -8.615850e-47 |
| Msa1354890 | Msa1380540 | 0.818629 | 1.774099e-52 | -8.615850e-47 |
| Msa1354910 | Msa1380540 | 0.832655 | 8.353363e-56 | -8.615850e-47 |
| Msa1354930 | Msa1380540 | 0.822850 | 1.899970e-53 | -8.615850e-47 |
| Msa1355020 | Msa1380540 | 0.958431 | 2.395839e-116 | -8.615850e-47 |
| Msa1355060 | Msa1380540 | 0.844910 | 5.640012e-59 | -8.615850e-47 |
| Msa1355070 | Msa1380540 | 0.806035 | 1.000198e-49 | -8.615850e-47 |
| Msa1355080 | Msa1380540 | 0.816430 | 5.553330e-52 | -8.615850e-47 |
| Msa1355100 | Msa1380540 | 0.818492 | 1.905992e-52 | -8.615850e-47 |
| Msa1371250 | Msa1380540 | 0.832783 | 7.762554e-56 | -8.615850e-47 |
| Msa1373590 | Msa1380540 | 0.827678 | 1.369985e-54 | -8.615850e-47 |
| Msa1374210 | Msa1380540 | 0.800793 | 1.219878e-48 | -8.615850e-47 |
| Msa1380540 | Msa1380590 | 0.803095 | 4.104495e-49 | -8.615850e-47 |
| Msa1380540 | Msa1380600 | 0.857332 | 1.753873e-62 | -8.615850e-47 |
| Msa1380540 | Msa1380620 | 0.801482 | 8.820035e-49 | -8.615850e-47 |
| Msa1380540 | Msa1385450 | 0.800197 | 1.613643e-48 | -8.615850e-47 |
| Msa1380540 | Msa1385940 | 0.860128 | 2.563612e-63 | -8.615850e-47 |
| Msa1380540 | Msa1387090 | 0.817040 | 4.053200e-52 | -8.615850e-47 |
| Msa1380540 | Msa1389990 | 0.838076 | 3.565301e-57 | -8.615850e-47 |
| Msa1380540 | Msa1390410 | 0.841279 | 5.231504e-58 | -8.615850e-47 |
| Msa1380540 | Msa1393600 | 0.860783 | 1.622970e-63 | -8.615850e-47 |
| Msa1380540 | Msa1394040 | 0.822062 | 2.896136e-53 | -8.615850e-47 |
| Msa1380540 | Msa1394090 | 0.954700 | 1.636662e-112 | -8.615850e-47 |
| Msa1380540 | Msa1394100 | 0.942161 | 1.173333e-101 | -8.615850e-47 |
| Msa1380540 | Msa1394140 | 0.819255 | 1.278608e-52 | -8.615850e-47 |
| Msa1380540 | Msa1394150 | 0.819296 | 1.251364e-52 | -8.615850e-47 |
| Msa1380540 | Msa1394170 | 0.853456 | 2.361619e-61 | -8.615850e-47 |
| Msa1380540 | Msa1394210 | 0.837295 | 5.655470e-57 | -8.615850e-47 |
| Msa1380540 | Msa1394220 | 0.810869 | 9.301579e-51 | -8.615850e-47 |
| Msa1380540 | Msa1394230 | 0.800277 | 1.554183e-48 | -8.615850e-47 |
| Msa1380540 | Msa1394240 | 0.803425 | 3.507409e-49 | -8.615850e-47 |
| Msa1380540 | Msa1394280 | 0.950608 | 1.157738e-108 | -8.615850e-47 |
| Msa1380540 | Msa1400330 | 0.804996 | 1.651745e-49 | -8.615850e-47 |
| Msa1380540 | Msa1400600 | 0.850522 | 1.608655e-60 | -8.615850e-47 |
| Msa1380540 | Msa1405190 | 0.815158 | 1.067154e-51 | -8.615850e-47 |
| Msa1380540 | Msa1414560 | 0.804516 | 2.081133e-49 | -8.615850e-47 |
| Msa1380540 | Msa1415120 | 0.854896 | 9.066637e-62 | -8.615850e-47 |
| Msa1380540 | Msa1422750 | 0.806399 | 8.383672e-50 | -8.615850e-47 |
| Msa1380540 | Msa1425050 | 0.820320 | 7.301509e-53 | -8.615850e-47 |
| Msa1380540 | Msa1425110 | 0.807028 | 6.174655e-50 | -8.615850e-47 |
| Msa1380540 | Msa1426870 | 0.800183 | 1.624058e-48 | -8.615850e-47 |
| Msa1380540 | Msa1433650 | 0.827771 | 1.301560e-54 | -8.615850e-47 |
| Msa1380540 | Msa1438420 | 0.812580 | 3.946123e-51 | -8.615850e-47 |
| Msa1380540 | Msa1439160 | 0.847316 | 1.249081e-59 | -8.615850e-47 |
| Msa1380540 | Msa1454940 | 0.828419 | 9.085017e-55 | -8.615850e-47 |
| Msa1380540 | Msa1465410 | 0.823139 | 1.627009e-53 | -8.615850e-47 |
| Msa1380540 | Msa1466170 | 0.831423 | 1.683720e-55 | -8.615850e-47 |
| Msa0606680 | Msa1380540 | 0.835398 | 1.717191e-56 | -8.615850e-47 |
| Msa0619060 | Msa1380540 | 0.804194 | 2.428324e-49 | -8.615850e-47 |
| Msa0619480 | Msa1380540 | 0.838842 | 2.261083e-57 | -8.615850e-47 |
| Msa0626890 | Msa1380540 | 0.819253 | 1.279787e-52 | -8.615850e-47 |
| Msa0635990 | Msa1380540 | 0.834394 | 3.074291e-56 | -8.615850e-47 |
| Msa0659130 | Msa1380540 | 0.809899 | 1.506133e-50 | -8.615850e-47 |
| Msa0659640 | Msa1380540 | 0.851033 | 1.154790e-60 | -8.615850e-47 |
| Msa0665010 | Msa1380540 | 0.828804 | 7.333623e-55 | -8.615850e-47 |
| Msa0665040 | Msa1380540 | 0.804498 | 2.098926e-49 | -8.615850e-47 |
| Msa0668630 | Msa1380540 | 0.916154 | 2.504369e-85 | -8.615850e-47 |
| Msa0677110 | Msa1380540 | 0.805532 | 1.275575e-49 | -8.615850e-47 |
| Msa0687320 | Msa1380540 | 0.837410 | 5.283641e-57 | -8.615850e-47 |
| Msa0688350 | Msa1380540 | 0.822604 | 2.167820e-53 | -8.615850e-47 |
| Msa0700430 | Msa1380540 | 0.809916 | 1.493250e-50 | -8.615850e-47 |
| Msa0704750 | Msa1380540 | 0.806867 | 6.678554e-50 | -8.615850e-47 |
| Msa0705610 | Msa1380540 | 0.817847 | 2.667287e-52 | -8.615850e-47 |
| Msa0706710 | Msa1380540 | 0.828525 | 8.563773e-55 | -8.615850e-47 |
| Msa0707870 | Msa1380540 | 0.829881 | 4.016853e-55 | -8.615850e-47 |
| Msa0708120 | Msa1380540 | 0.829350 | 5.407050e-55 | -8.615850e-47 |
| Msa0714160 | Msa1380540 | 0.801421 | 9.074945e-49 | -8.615850e-47 |
| Msa0720850 | Msa1380540 | 0.801409 | 9.129907e-49 | -8.615850e-47 |
| Msa0727020 | Msa1380540 | 0.868147 | 8.103215e-66 | -8.615850e-47 |
| Msa0727040 | Msa1380540 | 0.842951 | 1.889786e-58 | -8.615850e-47 |
| Msa0728520 | Msa1380540 | -0.811408 | 7.107856e-51 | -8.615850e-47 |
| Msa0729590 | Msa1380540 | 0.820465 | 6.762166e-53 | -8.615850e-47 |
| Msa0736330 | Msa1380540 | 0.867737 | 1.097307e-65 | -8.615850e-47 |
| Msa0736930 | Msa1380540 | 0.821453 | 4.005095e-53 | -8.615850e-47 |
| Msa0739570 | Msa1380540 | 0.801850 | 7.410069e-49 | -8.615850e-47 |
| Msa0741600 | Msa1380540 | 0.803034 | 4.226897e-49 | -8.615850e-47 |
| Msa0755590 | Msa1380540 | 0.802533 | 5.363674e-49 | -8.615850e-47 |
| Msa0766880 | Msa1380540 | 0.869714 | 2.518080e-66 | -8.615850e-47 |
| Msa0770020 | Msa1380540 | 0.805299 | 1.427591e-49 | -8.615850e-47 |
| Msa0771940 | Msa1380540 | 0.804854 | 1.768839e-49 | -8.615850e-47 |
| Msa0772210 | Msa1380540 | 0.811022 | 8.616539e-51 | -8.615850e-47 |
| Msa0776540 | Msa1380540 | -0.813638 | 2.313587e-51 | -8.615850e-47 |
| Msa0778060 | Msa1380540 | 0.841430 | 4.776275e-58 | -8.615850e-47 |
| Msa0804930 | Msa1380540 | 0.810704 | 1.009593e-50 | -8.615850e-47 |
| Msa0821490 | Msa1380540 | 0.840961 | 6.343260e-58 | -8.615850e-47 |
| Msa0833910 | Msa1380540 | 0.800996 | 1.108653e-48 | -8.615850e-47 |
| Msa0834160 | Msa1380540 | 0.800765 | 1.235808e-48 | -8.615850e-47 |
| Msa0839730 | Msa1380540 | 0.820516 | 6.581885e-53 | -8.615850e-47 |
| Msa0841980 | Msa1380540 | 0.817585 | 3.055143e-52 | -8.615850e-47 |
| Msa0123940 | Msa1380540 | 0.801467 | 8.883505e-49 | -8.615850e-47 |
| Msa0130120 | Msa1380540 | 0.832986 | 6.912778e-56 | -8.615850e-47 |
| Msa0130620 | Msa1380540 | 0.827086 | 1.899179e-54 | -8.615850e-47 |
| Msa0133670 | Msa1380540 | 0.849931 | 2.354900e-60 | -8.615850e-47 |
| Msa0133880 | Msa1380540 | 0.852564 | 4.250136e-61 | -8.615850e-47 |
| Msa0134550 | Msa1380540 | 0.851595 | 8.011032e-61 | -8.615850e-47 |
| Msa0138380 | Msa1380540 | 0.825802 | 3.842777e-54 | -8.615850e-47 |
| Msa0139740 | Msa1380540 | 0.830979 | 2.164783e-55 | -8.615850e-47 |
| Msa0148590 | Msa1380540 | 0.813414 | 2.591166e-51 | -8.615850e-47 |
| Msa0152910 | Msa1380540 | -0.805116 | 1.558780e-49 | -8.615850e-47 |
| Msa0156780 | Msa1380540 | 0.861605 | 9.121906e-64 | -8.615850e-47 |
| Msa0172660 | Msa1380540 | 0.802199 | 6.282343e-49 | -8.615850e-47 |
| Msa0175900 | Msa1380540 | 0.827089 | 1.896222e-54 | -8.615850e-47 |
| Msa0176530 | Msa1380540 | 0.827003 | 1.988701e-54 | -8.615850e-47 |
| Msa0184120 | Msa1380540 | 0.852988 | 3.216732e-61 | -8.615850e-47 |
| Msa0186750 | Msa1380540 | 0.814228 | 1.714312e-51 | -8.615850e-47 |
| Msa0187560 | Msa1380540 | 0.800728 | 1.257548e-48 | -8.615850e-47 |
| Msa0189050 | Msa1380540 | 0.845285 | 4.467981e-59 | -8.615850e-47 |
| Msa0197600 | Msa1380540 | 0.804459 | 2.138607e-49 | -8.615850e-47 |
| Msa0198220 | Msa1380540 | 0.806422 | 8.289200e-50 | -8.615850e-47 |
| Msa0201910 | Msa1380540 | 0.825946 | 3.552197e-54 | -8.615850e-47 |
| Msa0207220 | Msa1380540 | 0.820346 | 7.198775e-53 | -8.615850e-47 |
| Msa0207530 | Msa1380540 | 0.838124 | 3.463624e-57 | -8.615850e-47 |
| Msa0207900 | Msa1380540 | 0.824103 | 9.674721e-54 | -8.615850e-47 |
| Msa0216010 | Msa1380540 | 0.809141 | 2.190726e-50 | -8.615850e-47 |
| Msa0218480 | Msa1380540 | 0.806494 | 8.003944e-50 | -8.615850e-47 |
| Msa0218590 | Msa1380540 | 0.807435 | 5.061458e-50 | -8.615850e-47 |
| Msa0221860 | Msa1380540 | 0.926237 | 6.176448e-91 | -8.615850e-47 |
| Msa0222510 | Msa1380540 | 0.815173 | 1.058892e-51 | -8.615850e-47 |
| Msa0228360 | Msa1380540 | 0.800426 | 1.449447e-48 | -8.615850e-47 |
| Msa0231310 | Msa1380540 | 0.844869 | 5.786161e-59 | -8.615850e-47 |
| Msa1245300 | Msa1380540 | 0.829390 | 5.286720e-55 | -8.615850e-47 |
| Msa1246420 | Msa1380540 | 0.815556 | 8.703179e-52 | -8.615850e-47 |
| Msa1248400 | Msa1380540 | 0.815782 | 7.748468e-52 | -8.615850e-47 |
| Msa1251960 | Msa1380540 | 0.818833 | 1.595023e-52 | -8.615850e-47 |
| Msa1252040 | Msa1380540 | 0.870868 | 1.054167e-66 | -8.615850e-47 |
| Msa1264230 | Msa1380540 | 0.839150 | 1.881875e-57 | -8.615850e-47 |
| Msa1267800 | Msa1380540 | 0.825156 | 5.464892e-54 | -8.615850e-47 |
| Msa1279240 | Msa1380540 | 0.823136 | 1.629068e-53 | -8.615850e-47 |
| Msa1286660 | Msa1380540 | 0.805502 | 1.294210e-49 | -8.615850e-47 |
| Msa1302920 | Msa1380540 | 0.834538 | 2.829332e-56 | -8.615850e-47 |
| Msa1305090 | Msa1380540 | 0.816462 | 5.462124e-52 | -8.615850e-47 |
| Msa1309910 | Msa1380540 | 0.814810 | 1.274423e-51 | -8.615850e-47 |
| Msa1316160 | Msa1380540 | 0.821285 | 4.379913e-53 | -8.615850e-47 |
| Msa1319520 | Msa1380540 | 0.807378 | 5.204519e-50 | -8.615850e-47 |
| Msa1327820 | Msa1380540 | 0.815772 | 7.791279e-52 | -8.615850e-47 |
| Msa1332180 | Msa1380540 | 0.840004 | 1.129085e-57 | -8.615850e-47 |
| Msa1336350 | Msa1380540 | 0.802855 | 4.602520e-49 | -8.615850e-47 |
| Msa1343540 | Msa1380540 | 0.841893 | 3.604824e-58 | -8.615850e-47 |
| Msa0369750 | Msa1380540 | 0.823804 | 1.137114e-53 | -8.615850e-47 |
| Msa0370210 | Msa1380540 | 0.828507 | 8.653856e-55 | -8.615850e-47 |
| Msa0370510 | Msa1380540 | 0.817252 | 3.631792e-52 | -8.615850e-47 |
| Msa0372350 | Msa1380540 | 0.803593 | 3.237803e-49 | -8.615850e-47 |
| Msa0372380 | Msa1380540 | 0.816722 | 4.776918e-52 | -8.615850e-47 |
| Msa0377460 | Msa1380540 | 0.833084 | 6.532531e-56 | -8.615850e-47 |
| Msa0377690 | Msa1380540 | 0.820218 | 7.702262e-53 | -8.615850e-47 |
| Msa0379720 | Msa1380540 | 0.810267 | 1.255019e-50 | -8.615850e-47 |
| Msa0379900 | Msa1380540 | 0.807079 | 6.021192e-50 | -8.615850e-47 |
| Msa0390950 | Msa1380540 | 0.822204 | 2.684923e-53 | -8.615850e-47 |
| Msa0398610 | Msa1380540 | 0.858577 | 7.486374e-63 | -8.615850e-47 |
| Msa0398630 | Msa1380540 | 0.806927 | 6.483880e-50 | -8.615850e-47 |
| Msa0417130 | Msa1380540 | 0.805970 | 1.032195e-49 | -8.615850e-47 |
| Msa0420080 | Msa1380540 | 0.810424 | 1.160761e-50 | -8.615850e-47 |
| Msa0426860 | Msa1380540 | 0.823306 | 1.487333e-53 | -8.615850e-47 |
| Msa0426890 | Msa1380540 | 0.827459 | 1.546103e-54 | -8.615850e-47 |
| Msa0426990 | Msa1380540 | 0.817352 | 3.447622e-52 | -8.615850e-47 |
| Msa0427050 | Msa1380540 | 0.832669 | 8.285105e-56 | -8.615850e-47 |
| Msa0429100 | Msa1380540 | 0.810086 | 1.373008e-50 | -8.615850e-47 |
| Msa0429130 | Msa1380540 | 0.805387 | 1.368375e-49 | -8.615850e-47 |
| Msa0449900 | Msa1380540 | 0.889092 | 3.300065e-73 | -8.615850e-47 |
| Msa0449930 | Msa1380540 | 0.811782 | 5.894206e-51 | -8.615850e-47 |
| Msa0451370 | Msa1380540 | 0.809540 | 1.799525e-50 | -8.615850e-47 |
| Msa0463960 | Msa1380540 | 0.818966 | 1.487408e-52 | -8.615850e-47 |
| Msa0464500 | Msa1380540 | 0.807543 | 4.802599e-50 | -8.615850e-47 |
| Msa0472870 | Msa1380540 | 0.822458 | 2.343805e-53 | -8.615850e-47 |
| Msa0473320 | Msa1380540 | 0.831876 | 1.301684e-55 | -8.615850e-47 |
| Msa0473450 | Msa1380540 | 0.832038 | 1.187053e-55 | -8.615850e-47 |
| Msa0475830 | Msa1380540 | 0.868737 | 5.225640e-66 | -8.615850e-47 |
| Msa0981300 | Msa1380540 | 0.821567 | 3.770521e-53 | -8.615850e-47 |
| Msa0981900 | Msa1380540 | 0.801747 | 7.782838e-49 | -8.615850e-47 |
| Msa0983670 | Msa1380540 | 0.931046 | 6.725674e-94 | -8.615850e-47 |
| Msa0998940 | Msa1380540 | 0.811174 | 7.986645e-51 | -8.615850e-47 |
| Msa1007980 | Msa1380540 | 0.816652 | 4.952438e-52 | -8.615850e-47 |
| Msa1008960 | Msa1380540 | 0.804507 | 2.089762e-49 | -8.615850e-47 |
| Msa1016130 | Msa1380540 | 0.815004 | 1.154103e-51 | -8.615850e-47 |
| Msa1024580 | Msa1380540 | 0.810937 | 8.992112e-51 | -8.615850e-47 |
| Msa1029190 | Msa1380540 | 0.800056 | 1.723312e-48 | -8.615850e-47 |
| Msa1030280 | Msa1380540 | 0.800798 | 1.217129e-48 | -8.615850e-47 |
| Msa1031220 | Msa1380540 | 0.802334 | 5.893438e-49 | -8.615850e-47 |
| Msa1033230 | Msa1380540 | 0.839629 | 1.413446e-57 | -8.615850e-47 |
| Msa1037570 | Msa1380540 | 0.819678 | 1.023583e-52 | -8.615850e-47 |
| Msa1038420 | Msa1380540 | 0.804347 | 2.256147e-49 | -8.615850e-47 |
| Msa1049440 | Msa1380540 | 0.854325 | 1.326621e-61 | -8.615850e-47 |
| Msa1051410 | Msa1380540 | 0.813864 | 2.062208e-51 | -8.615850e-47 |
| Msa1063180 | Msa1380540 | 0.814874 | 1.233607e-51 | -8.615850e-47 |
| Msa1064410 | Msa1380540 | 0.800592 | 1.340922e-48 | -8.615850e-47 |
| Msa1070930 | Msa1380540 | 0.814131 | 1.801424e-51 | -8.615850e-47 |
| Msa1072770 | Msa1380540 | 0.848386 | 6.335948e-60 | -8.615850e-47 |
| Msa1079610 | Msa1380540 | 0.837511 | 4.977770e-57 | -8.615850e-47 |
| Msa1084630 | Msa1380540 | 0.804539 | 2.058325e-49 | -8.615850e-47 |
| Msa1086020 | Msa1380540 | 0.944408 | 2.060374e-103 | -8.615850e-47 |
| Msa1086060 | Msa1380540 | 0.844754 | 6.214238e-59 | -8.615850e-47 |
| Msa1086070 | Msa1380540 | 0.809967 | 1.456318e-50 | -8.615850e-47 |
| Msa1086080 | Msa1380540 | 0.843031 | 1.799495e-58 | -8.615850e-47 |
| Msa1086100 | Msa1380540 | 0.803292 | 3.738030e-49 | -8.615850e-47 |
| Msa1086140 | Msa1380540 | 0.805595 | 1.237300e-49 | -8.615850e-47 |
| Msa1086160 | Msa1380540 | 0.883885 | 3.070654e-71 | -8.615850e-47 |
| Msa1086170 | Msa1380540 | 0.842997 | 1.837268e-58 | -8.615850e-47 |
| Msa1086180 | Msa1380540 | 0.800107 | 1.683251e-48 | -8.615850e-47 |
| Msa1086190 | Msa1380540 | 0.825354 | 4.907771e-54 | -8.615850e-47 |
| Msa1086210 | Msa1380540 | 0.810847 | 9.403098e-51 | -8.615850e-47 |
| Msa1086260 | Msa1380540 | 0.865594 | 5.273911e-65 | -8.615850e-47 |
| Msa1086270 | Msa1380540 | 0.805530 | 1.276746e-49 | -8.615850e-47 |
| Msa1086280 | Msa1380540 | 0.801981 | 6.966632e-49 | -8.615850e-47 |
| Msa1086290 | Msa1380540 | 0.837432 | 5.217319e-57 | -8.615850e-47 |
| Msa1086330 | Msa1380540 | 0.955076 | 6.952299e-113 | -8.615850e-47 |
| Msa1086340 | Msa1380540 | 0.907678 | 3.908936e-81 | -8.615850e-47 |
| Msa1086370 | Msa1380540 | 0.875350 | 3.301795e-68 | -8.615850e-47 |
| Msa1086410 | Msa1380540 | 0.870432 | 1.465764e-66 | -8.615850e-47 |
| Msa1086440 | Msa1380540 | 0.851257 | 9.986700e-61 | -8.615850e-47 |
| Msa1086480 | Msa1380540 | 0.840784 | 7.056863e-58 | -8.615850e-47 |
| Msa1086520 | Msa1380540 | 0.929723 | 4.611930e-93 | -8.615850e-47 |
| Msa1086630 | Msa1380540 | 0.956692 | 1.617744e-114 | -8.615850e-47 |
| Msa1086690 | Msa1380540 | 0.930298 | 2.008648e-93 | -8.615850e-47 |
| Msa1086830 | Msa1380540 | 0.961370 | 1.267826e-119 | -8.615850e-47 |
| Msa1086870 | Msa1380540 | 0.857235 | 1.873826e-62 | -8.615850e-47 |
| Msa1086880 | Msa1380540 | 0.802115 | 6.537702e-49 | -8.615850e-47 |
| Msa1086890 | Msa1380540 | 0.825093 | 5.655804e-54 | -8.615850e-47 |
| Msa1086910 | Msa1380540 | 0.800086 | 1.699294e-48 | -8.615850e-47 |
| Msa1087000 | Msa1380540 | 0.865833 | 4.430839e-65 | -8.615850e-47 |
| Msa1090230 | Msa1380540 | 0.802815 | 4.690744e-49 | -8.615850e-47 |
| Msa1091690 | Msa1380540 | 0.803907 | 2.785737e-49 | -8.615850e-47 |
| Msa1098070 | Msa1380540 | 0.813594 | 2.364782e-51 | -8.615850e-47 |
| Msa0240290 | Msa1380540 | 0.843040 | 1.789171e-58 | -8.615850e-47 |
| Msa0240460 | Msa1380540 | 0.826777 | 2.251608e-54 | -8.615850e-47 |
| Msa0244320 | Msa1380540 | 0.800804 | 1.213471e-48 | -8.615850e-47 |
| Msa0256170 | Msa1380540 | 0.829540 | 4.862682e-55 | -8.615850e-47 |
| Msa0268180 | Msa1380540 | 0.862736 | 4.101936e-64 | -8.615850e-47 |
| Msa0268220 | Msa1380540 | 0.950950 | 5.684448e-109 | -8.615850e-47 |
| Msa0268340 | Msa1380540 | 0.931598 | 2.981265e-94 | -8.615850e-47 |
| Msa0268380 | Msa1380540 | 0.825262 | 5.158680e-54 | -8.615850e-47 |
| Msa0268390 | Msa1380540 | 0.806578 | 7.684518e-50 | -8.615850e-47 |
| Msa0268400 | Msa1380540 | 0.813767 | 2.166077e-51 | -8.615850e-47 |
| Msa0268410 | Msa1380540 | 0.803086 | 4.121902e-49 | -8.615850e-47 |
| Msa0268420 | Msa1380540 | 0.872203 | 3.808205e-67 | -8.615850e-47 |
| Msa0268460 | Msa1380540 | 0.925895 | 9.855663e-91 | -8.615850e-47 |
| Msa0268500 | Msa1380540 | 0.942386 | 7.875055e-102 | -8.615850e-47 |
| Msa0268540 | Msa1380540 | 0.852554 | 4.277666e-61 | -8.615850e-47 |
| Msa0268550 | Msa1380540 | 0.811580 | 6.520633e-51 | -8.615850e-47 |
| Msa0268560 | Msa1380540 | 0.831868 | 1.307437e-55 | -8.615850e-47 |
| Msa0268630 | Msa1380540 | 0.836205 | 1.072752e-56 | -8.615850e-47 |
| Msa0268640 | Msa1380540 | 0.810928 | 9.031943e-51 | -8.615850e-47 |
| Msa0268650 | Msa1380540 | 0.870119 | 1.855580e-66 | -8.615850e-47 |
| Msa0268680 | Msa1380540 | 0.868620 | 5.702679e-66 | -8.615850e-47 |
| Msa0268690 | Msa1380540 | 0.878632 | 2.399249e-69 | -8.615850e-47 |
| Msa0268730 | Msa1380540 | 0.823513 | 1.330330e-53 | -8.615850e-47 |
| Msa0268740 | Msa1380540 | 0.830812 | 2.377844e-55 | -8.615850e-47 |
| Msa0268760 | Msa1380540 | 0.856458 | 3.173388e-62 | -8.615850e-47 |
| Msa0268830 | Msa1380540 | 0.809147 | 2.184168e-50 | -8.615850e-47 |
| Msa0268850 | Msa1380540 | 0.860816 | 1.586807e-63 | -8.615850e-47 |
| Msa0268900 | Msa1380540 | 0.899275 | 2.328531e-77 | -8.615850e-47 |
| Msa0268930 | Msa1380540 | 0.829654 | 4.560056e-55 | -8.615850e-47 |
| Msa0268940 | Msa1380540 | 0.806150 | 9.458879e-50 | -8.615850e-47 |
| Msa0268950 | Msa1380540 | 0.819449 | 1.154986e-52 | -8.615850e-47 |
| Msa0269040 | Msa1380540 | 0.814129 | 1.802628e-51 | -8.615850e-47 |
| Msa0269050 | Msa1380540 | 0.802380 | 5.766980e-49 | -8.615850e-47 |
| Msa0269060 | Msa1380540 | 0.861627 | 8.981848e-64 | -8.615850e-47 |
| Msa0269100 | Msa1380540 | 0.928633 | 2.191748e-92 | -8.615850e-47 |
| Msa0278080 | Msa1380540 | 0.829373 | 5.337918e-55 | -8.615850e-47 |
| Msa0282880 | Msa1380540 | 0.825520 | 4.483521e-54 | -8.615850e-47 |
| Msa0288270 | Msa1380540 | 0.800734 | 1.254267e-48 | -8.615850e-47 |
| Msa0288280 | Msa1380540 | 0.813710 | 2.230436e-51 | -8.615850e-47 |
| Msa0301800 | Msa1380540 | 0.816642 | 4.978398e-52 | -8.615850e-47 |
| Msa0306130 | Msa1380540 | 0.811489 | 6.826005e-51 | -8.615850e-47 |
| Msa0307490 | Msa1380540 | 0.806278 | 8.891123e-50 | -8.615850e-47 |
| Msa0307750 | Msa1380540 | 0.800102 | 1.687247e-48 | -8.615850e-47 |
| Msa0309160 | Msa1380540 | 0.840801 | 6.987720e-58 | -8.615850e-47 |
| Msa0317630 | Msa1380540 | 0.817544 | 3.120602e-52 | -8.615850e-47 |
| Msa0321180 | Msa1380540 | 0.821205 | 4.569673e-53 | -8.615850e-47 |
| Msa0321200 | Msa1380540 | 0.823263 | 1.521827e-53 | -8.615850e-47 |
| Msa0324060 | Msa1380540 | 0.835195 | 1.932293e-56 | -8.615850e-47 |
| Msa0338900 | Msa1380540 | 0.813377 | 2.640453e-51 | -8.615850e-47 |
| Msa0344180 | Msa1380540 | 0.830935 | 2.218965e-55 | -8.615850e-47 |
| Msa0344190 | Msa1380540 | 0.833320 | 5.706910e-56 | -8.615850e-47 |
| Msa0344200 | Msa1380540 | 0.825061 | 5.757079e-54 | -8.615850e-47 |
| Msa0344240 | Msa1380540 | 0.868392 | 6.754484e-66 | -8.615850e-47 |
| Msa0344250 | Msa1380540 | 0.937945 | 1.514276e-98 | -8.615850e-47 |
| Msa0344310 | Msa1380540 | 0.825117 | 5.582358e-54 | -8.615850e-47 |
| Msa1122480 | Msa1380540 | 0.836477 | 9.148534e-57 | -8.615850e-47 |
| Msa1123340 | Msa1380540 | 0.823314 | 1.480823e-53 | -8.615850e-47 |
| Msa1124180 | Msa1380540 | 0.800513 | 1.391174e-48 | -8.615850e-47 |
| Msa1124440 | Msa1380540 | 0.859881 | 3.042174e-63 | -8.615850e-47 |
| Msa1130700 | Msa1380540 | 0.828123 | 1.070965e-54 | -8.615850e-47 |
| Msa1131010 | Msa1380540 | 0.818506 | 1.892055e-52 | -8.615850e-47 |
| Msa1132540 | Msa1380540 | 0.812911 | 3.339850e-51 | -8.615850e-47 |
| Msa1140940 | Msa1380540 | 0.814322 | 1.634541e-51 | -8.615850e-47 |
| Msa1143120 | Msa1380540 | 0.805400 | 1.359654e-49 | -8.615850e-47 |
| Msa1143140 | Msa1380540 | 0.831475 | 1.634296e-55 | -8.615850e-47 |
| Msa1143160 | Msa1380540 | 0.826083 | 3.295976e-54 | -8.615850e-47 |
| Msa1157160 | Msa1380540 | 0.824203 | 9.166392e-54 | -8.615850e-47 |
| Msa1161120 | Msa1380540 | 0.831959 | 1.241506e-55 | -8.615850e-47 |
| Msa1164650 | Msa1380540 | 0.801278 | 9.709371e-49 | -8.615850e-47 |
| Msa1168130 | Msa1380540 | 0.831796 | 1.362478e-55 | -8.615850e-47 |
| Msa1173410 | Msa1380540 | 0.824427 | 8.118022e-54 | -8.615850e-47 |
| Msa1177690 | Msa1380540 | 0.808811 | 2.577494e-50 | -8.615850e-47 |
| Msa1182960 | Msa1380540 | 0.802624 | 5.134976e-49 | -8.615850e-47 |
| Msa1195860 | Msa1380540 | 0.826989 | 2.004211e-54 | -8.615850e-47 |
| Msa1198420 | Msa1380540 | 0.857764 | 1.306771e-62 | -8.615850e-47 |
| Msa1199690 | Msa1380540 | 0.845319 | 4.373169e-59 | -8.615850e-47 |
| Msa1204110 | Msa1380540 | 0.827149 | 1.835035e-54 | -8.615850e-47 |
| Msa1209390 | Msa1380540 | 0.803497 | 3.389107e-49 | -8.615850e-47 |
| Msa1209650 | Msa1380540 | 0.811391 | 7.166098e-51 | -8.615850e-47 |
| Msa1211100 | Msa1380540 | 0.825806 | 3.833476e-54 | -8.615850e-47 |
| Msa1211120 | Msa1380540 | 0.821591 | 3.722559e-53 | -8.615850e-47 |
| Msa1211880 | Msa1380540 | 0.853204 | 2.789770e-61 | -8.615850e-47 |
| Msa1215660 | Msa1380540 | 0.813743 | 2.193112e-51 | -8.615850e-47 |
| Msa0497060 | Msa1380540 | 0.802467 | 5.533751e-49 | -8.615850e-47 |
| Msa0509510 | Msa1380540 | 0.816784 | 4.625717e-52 | -8.615850e-47 |
| Msa0512770 | Msa1380540 | 0.823978 | 1.035416e-53 | -8.615850e-47 |
| Msa0517400 | Msa1380540 | 0.829842 | 4.104153e-55 | -8.615850e-47 |
| Msa0558220 | Msa1380540 | 0.801224 | 9.959992e-49 | -8.615850e-47 |
| Msa0558890 | Msa1380540 | 0.808248 | 3.399491e-50 | -8.615850e-47 |
| Msa0564000 | Msa1380540 | 0.842995 | 1.838697e-58 | -8.615850e-47 |
| Msa0568490 | Msa1380540 | 0.806547 | 7.799810e-50 | -8.615850e-47 |
| Msa0571220 | Msa1380540 | 0.823772 | 1.156851e-53 | -8.615850e-47 |
| Msa0574230 | Msa1380540 | 0.825335 | 4.957344e-54 | -8.615850e-47 |
| Msa0574450 | Msa1380540 | 0.816327 | 5.855932e-52 | -8.615850e-47 |
| Msa0576510 | Msa1380540 | 0.822067 | 2.888145e-53 | -8.615850e-47 |
| Msa0577140 | Msa1380540 | 0.806219 | 9.145916e-50 | -8.615850e-47 |
| Msa0577910 | Msa1380540 | 0.826079 | 3.303438e-54 | -8.615850e-47 |
| Msa0582510 | Msa1380540 | 0.812154 | 4.890757e-51 | -8.615850e-47 |
| Msa0582530 | Msa1380540 | 0.832242 | 1.056793e-55 | -8.615850e-47 |
| Msa0582570 | Msa1380540 | 0.945161 | 5.123917e-104 | -8.615850e-47 |
| Msa0582580 | Msa1380540 | 0.931683 | 2.626530e-94 | -8.615850e-47 |
| Msa0582620 | Msa1380540 | 0.834546 | 2.814976e-56 | -8.615850e-47 |
| Msa0582640 | Msa1380540 | 0.830309 | 3.157136e-55 | -8.615850e-47 |
| Msa0582660 | Msa1380540 | 0.823703 | 1.200941e-53 | -8.615850e-47 |
| Msa0582690 | Msa1380540 | 0.810548 | 1.091316e-50 | -8.615850e-47 |
| Msa0582700 | Msa1380540 | 0.805648 | 1.206049e-49 | -8.615850e-47 |
| Msa0582710 | Msa1380540 | 0.839526 | 1.503151e-57 | -8.615850e-47 |
| Msa0582740 | Msa1380540 | 0.836280 | 1.026655e-56 | -8.615850e-47 |
| Msa0582760 | Msa1380540 | 0.823891 | 1.084874e-53 | -8.615850e-47 |
| Msa0582780 | Msa1380540 | 0.814028 | 1.897599e-51 | -8.615850e-47 |
| Msa0582810 | Msa1380540 | 0.804471 | 2.126585e-49 | -8.615850e-47 |
| Msa0582820 | Msa1380540 | 0.811064 | 8.437856e-51 | -8.615850e-47 |
| Msa0582830 | Msa1380540 | 0.835094 | 2.049329e-56 | -8.615850e-47 |
| Msa0582900 | Msa1380540 | 0.813626 | 2.327036e-51 | -8.615850e-47 |
| Msa0582910 | Msa1380540 | 0.815848 | 7.492293e-52 | -8.615850e-47 |
| Msa0582930 | Msa1380540 | 0.847189 | 1.353342e-59 | -8.615850e-47 |
| Msa0587060 | Msa1380540 | 0.834772 | 2.469807e-56 | -8.615850e-47 |
| Msa0591370 | Msa1380540 | 0.858115 | 1.028330e-62 | -8.615850e-47 |
| Msa0591380 | Msa1380540 | 0.820713 | 5.931157e-53 | -8.615850e-47 |
| Msa0595240 | Msa1380540 | 0.829775 | 4.261524e-55 | -8.615850e-47 |
| Msa0601780 | Msa1380540 | 0.801082 | 1.064807e-48 | -8.615850e-47 |
| Msa0851870 | Msa1380540 | 0.802883 | 4.541179e-49 | -8.615850e-47 |
| Msa0855490 | Msa1380540 | 0.861398 | 1.055252e-63 | -8.615850e-47 |
| Msa0860270 | Msa1380540 | 0.808385 | 3.179054e-50 | -8.615850e-47 |
| Msa0880370 | Msa1380540 | 0.806793 | 6.921393e-50 | -8.615850e-47 |
| Msa0883880 | Msa1380540 | 0.801309 | 9.569956e-49 | -8.615850e-47 |
| Msa0910650 | Msa1380540 | 0.802630 | 5.121216e-49 | -8.615850e-47 |
| Msa0924820 | Msa1380540 | 0.932442 | 8.459185e-95 | -8.615850e-47 |
| Msa0924860 | Msa1380540 | 0.803951 | 2.727411e-49 | -8.615850e-47 |
| Msa0924870 | Msa1380540 | 0.837993 | 3.744688e-57 | -8.615850e-47 |
| Msa0924890 | Msa1380540 | 0.855723 | 5.209294e-62 | -8.615850e-47 |
| Msa0924970 | Msa1380540 | 0.891143 | 5.197385e-74 | -8.615850e-47 |
| Msa0925020 | Msa1380540 | 0.948888 | 3.850286e-107 | -8.615850e-47 |
| Msa0930160 | Msa1380540 | 0.819035 | 1.434536e-52 | -8.615850e-47 |
| Msa0930990 | Msa1380540 | 0.876928 | 9.447574e-69 | -8.615850e-47 |
| Msa0931070 | Msa1380540 | 0.815608 | 8.471471e-52 | -8.615850e-47 |
| Msa0931090 | Msa1380540 | 0.852368 | 4.831981e-61 | -8.615850e-47 |
| Msa0931100 | Msa1380540 | 0.818151 | 2.276123e-52 | -8.615850e-47 |
| Msa0931130 | Msa1380540 | 0.807709 | 4.428041e-50 | -8.615850e-47 |
| Msa0931150 | Msa1380540 | 0.841218 | 5.429641e-58 | -8.615850e-47 |
| Msa0931220 | Msa1380540 | 0.839386 | 1.634110e-57 | -8.615850e-47 |
| Msa0931240 | Msa1380540 | 0.811081 | 8.367650e-51 | -8.615850e-47 |
| Msa0931270 | Msa1380540 | 0.803645 | 3.157973e-49 | -8.615850e-47 |
| Msa0931280 | Msa1380540 | 0.878146 | 3.555484e-69 | -8.615850e-47 |
| Msa0945560 | Msa1380540 | 0.805484 | 1.305653e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380540 | MtrunA17_CPg0492781 | 98.333 | 60 | 1 | 0 | 46 | 105 | 7 | 66 | 1.14e-38 | 124 |
| Msa1380540 | MtrunA17_Chr4g0015791 | 98.333 | 60 | 1 | 0 | 46 | 105 | 7 | 66 | 1.14e-38 | 124 |
| Msa1380540 | MtrunA17_Chr8g0355601 | 96.610 | 59 | 2 | 0 | 46 | 104 | 7 | 65 | 1.73e-37 | 120 |
| Msa1380540 | MtrunA17_Chr7g0224991 | 95.455 | 44 | 2 | 0 | 62 | 105 | 6 | 49 | 7.95e-26 | 90.9 |
| Msa1380540 | MtrunA17_CPg0492791 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa1380540 | MtrunA17_Chr4g0015781 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa1380540 | MtrunA17_Chr4g0028951 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa1380540 | MtrunA17_Chr8g0355611 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa1380540 | MtrunA17_Chr4g0016881 | 96.774 | 31 | 1 | 0 | 15 | 45 | 1 | 31 | 5.83e-15 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380540 | ATCG00640.1 | 75.000 | 60 | 15 | 0 | 46 | 105 | 7 | 66 | 2.13e-29 | 100 |
| Msa1380540 | ATCG00630.1 | 84.375 | 32 | 5 | 0 | 15 | 46 | 1 | 32 | 8.57e-13 | 58.2 |
Find 13 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACGAATAACTGTTATTT+TGG | 0.125276 | tig0020386:-6065 | Msa1380540:CDS |
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | tig0020386:-6021 | Msa1380540:CDS |
| AATCGTATGTTTGCAACAAA+AGG | 0.396841 | tig0020386:+5925 | None:intergenic |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | tig0020386:-6692 | Msa1380540:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | tig0020386:-6020 | Msa1380540:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | tig0020386:-6675 | Msa1380540:CDS |
| ACACAATACACCTAGTCGAT+TGG | 0.524208 | tig0020386:-5966 | Msa1380540:CDS |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | tig0020386:-6685 | Msa1380540:CDS |
| ATCGTATGTTTGCAACAAAA+GGG | 0.538893 | tig0020386:+5926 | None:intergenic |
| TTTCTCAATTCCAATCGACT+AGG | 0.574270 | tig0020386:+5956 | None:intergenic |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | tig0020386:-6706 | Msa1380540:CDS |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | tig0020386:+6690 | None:intergenic |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | tig0020386:-6019 | Msa1380540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACTAGAATCAAAAAAA+GGG | + | tig0020386:6066-6085 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | tig0020386:6190-6209 | Msa1380540:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | tig0020386:6284-6303 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | tig0020386:6440-6459 | Msa1380540:intron | 15.0% |
| !! | AATAACTAGAATCAAAAAAA+GGG | + | tig0020386:6066-6085 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | tig0020386:6190-6209 | Msa1380540:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | tig0020386:6284-6303 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | tig0020386:6440-6459 | Msa1380540:intron | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | tig0020386:5914-5933 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | tig0020386:5913-5932 | Msa1380540:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | + | tig0020386:6065-6084 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | tig0020386:6067-6086 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | tig0020386:6065-6084 | Msa1380540:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | tig0020386:6120-6139 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | tig0020386:6193-6212 | Msa1380540:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | tig0020386:6199-6218 | Msa1380540:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | tig0020386:6315-6334 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | tig0020386:6604-6623 | Msa1380540:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | tig0020386:6640-6659 | Msa1380540:intron | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | tig0020386:5914-5933 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | tig0020386:5913-5932 | Msa1380540:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | + | tig0020386:6065-6084 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | tig0020386:6067-6086 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | tig0020386:6065-6084 | Msa1380540:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | tig0020386:6120-6139 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | tig0020386:6193-6212 | Msa1380540:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | tig0020386:6199-6218 | Msa1380540:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | tig0020386:6315-6334 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | tig0020386:6604-6623 | Msa1380540:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | tig0020386:6640-6659 | Msa1380540:intron | 20.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | tig0020386:6137-6156 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | tig0020386:6138-6157 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | tig0020386:6319-6338 | Msa1380540:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | tig0020386:6320-6339 | Msa1380540:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | tig0020386:6558-6577 | Msa1380540:intron | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | tig0020386:6137-6156 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | tig0020386:6138-6157 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | tig0020386:6319-6338 | Msa1380540:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | tig0020386:6320-6339 | Msa1380540:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | tig0020386:6558-6577 | Msa1380540:intron | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | - | tig0020386:5916-5935 | Msa1380540:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | tig0020386:5954-5973 | Msa1380540:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | tig0020386:6026-6045 | Msa1380540:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | tig0020386:6070-6089 | Msa1380540:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | tig0020386:6225-6244 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | tig0020386:6299-6318 | Msa1380540:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | tig0020386:6323-6342 | Msa1380540:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | tig0020386:6561-6580 | Msa1380540:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | tig0020386:6594-6613 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | tig0020386:6648-6667 | Msa1380540:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | tig0020386:6649-6668 | Msa1380540:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | tig0020386:6650-6669 | Msa1380540:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | tig0020386:6746-6765 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | tig0020386:6747-6766 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | - | tig0020386:5916-5935 | Msa1380540:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | tig0020386:5954-5973 | Msa1380540:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | tig0020386:6026-6045 | Msa1380540:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | tig0020386:6070-6089 | Msa1380540:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | tig0020386:6225-6244 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | tig0020386:6299-6318 | Msa1380540:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | tig0020386:6323-6342 | Msa1380540:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | tig0020386:6561-6580 | Msa1380540:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | tig0020386:6594-6613 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | tig0020386:6648-6667 | Msa1380540:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | tig0020386:6649-6668 | Msa1380540:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | tig0020386:6650-6669 | Msa1380540:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | tig0020386:6746-6765 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | tig0020386:6747-6766 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | tig0020386:6228-6247 | Msa1380540:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | tig0020386:6248-6267 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | tig0020386:6249-6268 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | tig0020386:6324-6343 | Msa1380540:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | tig0020386:6519-6538 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | tig0020386:6568-6587 | Msa1380540:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | tig0020386:6716-6735 | None:intergenic | 35.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | tig0020386:6228-6247 | Msa1380540:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | tig0020386:6248-6267 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | tig0020386:6249-6268 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | tig0020386:6324-6343 | Msa1380540:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | tig0020386:6519-6538 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | tig0020386:6568-6587 | Msa1380540:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | tig0020386:6716-6735 | None:intergenic | 35.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | tig0020386:6215-6234 | Msa1380540:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | tig0020386:6237-6256 | Msa1380540:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | tig0020386:6703-6722 | Msa1380540:CDS | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | tig0020386:6215-6234 | Msa1380540:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | tig0020386:6237-6256 | Msa1380540:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | tig0020386:6703-6722 | Msa1380540:CDS | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | tig0020386:5982-6001 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | tig0020386:6048-6067 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | tig0020386:6075-6094 | Msa1380540:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | tig0020386:6076-6095 | Msa1380540:intron | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | tig0020386:5982-6001 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | tig0020386:6048-6067 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | tig0020386:6075-6094 | Msa1380540:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | tig0020386:6076-6095 | Msa1380540:intron | 45.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | tig0020386:5963-5982 | Msa1380540:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | tig0020386:5977-5996 | Msa1380540:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | tig0020386:5984-6003 | Msa1380540:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | tig0020386:6047-6066 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | tig0020386:6077-6096 | Msa1380540:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | tig0020386:6575-6594 | Msa1380540:intron | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | tig0020386:5963-5982 | Msa1380540:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | tig0020386:5977-5996 | Msa1380540:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | tig0020386:5984-6003 | Msa1380540:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | tig0020386:6047-6066 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | tig0020386:6077-6096 | Msa1380540:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | tig0020386:6575-6594 | Msa1380540:intron | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | tig0020386:5994-6013 | Msa1380540:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | tig0020386:6577-6596 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | tig0020386:6574-6593 | Msa1380540:intron | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | tig0020386:5994-6013 | Msa1380540:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | tig0020386:6577-6596 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | tig0020386:6574-6593 | Msa1380540:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020386 | gene | 5904 | 6787 | 5904 | ID=Msa1380540;Name=Msa1380540 |
| tig0020386 | mRNA | 5904 | 6787 | 5904 | ID=Msa1380540-mRNA-1;Parent=Msa1380540;Name=Msa1380540-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|0|0|2|0|105 |
| tig0020386 | exon | 6655 | 6787 | 6655 | ID=Msa1380540-mRNA-1:exon:7199;Parent=Msa1380540-mRNA-1 |
| tig0020386 | exon | 5904 | 6088 | 5904 | ID=Msa1380540-mRNA-1:exon:7198;Parent=Msa1380540-mRNA-1 |
| tig0020386 | CDS | 6655 | 6787 | 6655 | ID=Msa1380540-mRNA-1:cds;Parent=Msa1380540-mRNA-1 |
| tig0020386 | CDS | 5904 | 6088 | 5904 | ID=Msa1380540-mRNA-1:cds;Parent=Msa1380540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
