Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268540 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268540 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268540 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0268540 | 0.802295 | 6.004530e-49 | -8.615850e-47 |
| Msa0009210 | Msa0268540 | 0.805223 | 1.480986e-49 | -8.615850e-47 |
| Msa0017120 | Msa0268540 | 0.800363 | 1.492672e-48 | -8.615850e-47 |
| Msa0028610 | Msa0268540 | 0.819712 | 1.005560e-52 | -8.615850e-47 |
| Msa0034320 | Msa0268540 | 0.800715 | 1.265192e-48 | -8.615850e-47 |
| Msa0035090 | Msa0268540 | 0.840911 | 6.537028e-58 | -8.615850e-47 |
| Msa0039200 | Msa0268540 | 0.809426 | 1.903142e-50 | -8.615850e-47 |
| Msa0040190 | Msa0268540 | 0.818696 | 1.712956e-52 | -8.615850e-47 |
| Msa0057260 | Msa0268540 | 0.806654 | 7.406719e-50 | -8.615850e-47 |
| Msa0057740 | Msa0268540 | 0.804672 | 1.930287e-49 | -8.615850e-47 |
| Msa0065390 | Msa0268540 | 0.806995 | 6.274136e-50 | -8.615850e-47 |
| Msa0076280 | Msa0268540 | 0.806310 | 8.752932e-50 | -8.615850e-47 |
| Msa0079530 | Msa0268540 | 0.809287 | 2.038644e-50 | -8.615850e-47 |
| Msa0083570 | Msa0268540 | 0.812937 | 3.296977e-51 | -8.615850e-47 |
| Msa0086820 | Msa0268540 | 0.811037 | 8.553649e-51 | -8.615850e-47 |
| Msa0087880 | Msa0268540 | 0.811598 | 6.463293e-51 | -8.615850e-47 |
| Msa0092750 | Msa0268540 | 0.847382 | 1.197747e-59 | -8.615850e-47 |
| Msa0094420 | Msa0268540 | 0.826421 | 2.738704e-54 | -8.615850e-47 |
| Msa0095140 | Msa0268540 | 0.875808 | 2.301557e-68 | -8.615850e-47 |
| Msa0095180 | Msa0268540 | 0.815960 | 7.072675e-52 | -8.615850e-47 |
| Msa0095200 | Msa0268540 | 0.882380 | 1.093458e-70 | -8.615850e-47 |
| Msa0095240 | Msa0268540 | 0.849518 | 3.071979e-60 | -8.615850e-47 |
| Msa0095270 | Msa0268540 | 0.872161 | 3.932350e-67 | -8.615850e-47 |
| Msa0099830 | Msa0268540 | 0.823202 | 1.572205e-53 | -8.615850e-47 |
| Msa0103060 | Msa0268540 | 0.808239 | 3.415757e-50 | -8.615850e-47 |
| Msa0103780 | Msa0268540 | 0.806115 | 9.620619e-50 | -8.615850e-47 |
| Msa0110710 | Msa0268540 | 0.806071 | 9.827494e-50 | -8.615850e-47 |
| Msa0123940 | Msa0268540 | 0.809715 | 1.650163e-50 | -8.615850e-47 |
| Msa0124070 | Msa0268540 | 0.807809 | 4.216478e-50 | -8.615850e-47 |
| Msa0130120 | Msa0268540 | 0.826184 | 3.117653e-54 | -8.615850e-47 |
| Msa0133670 | Msa0268540 | 0.812310 | 4.521908e-51 | -8.615850e-47 |
| Msa0133880 | Msa0268540 | 0.815835 | 7.541343e-52 | -8.615850e-47 |
| Msa0134550 | Msa0268540 | 0.820426 | 6.903713e-53 | -8.615850e-47 |
| Msa0139740 | Msa0268540 | 0.825451 | 4.655485e-54 | -8.615850e-47 |
| Msa0141670 | Msa0268540 | 0.827968 | 1.166855e-54 | -8.615850e-47 |
| Msa0146470 | Msa0268540 | 0.800111 | 1.680252e-48 | -8.615850e-47 |
| Msa0149070 | Msa0268540 | 0.802963 | 4.371363e-49 | -8.615850e-47 |
| Msa0156780 | Msa0268540 | 0.810551 | 1.089520e-50 | -8.615850e-47 |
| Msa0157020 | Msa0268540 | 0.818585 | 1.815068e-52 | -8.615850e-47 |
| Msa0175900 | Msa0268540 | 0.844542 | 7.088475e-59 | -8.615850e-47 |
| Msa0180980 | Msa0268540 | 0.807182 | 5.728176e-50 | -8.615850e-47 |
| Msa0184120 | Msa0268540 | 0.814650 | 1.382972e-51 | -8.615850e-47 |
| Msa0185390 | Msa0268540 | 0.808733 | 2.679498e-50 | -8.615850e-47 |
| Msa0186750 | Msa0268540 | 0.813229 | 2.845462e-51 | -8.615850e-47 |
| Msa0190000 | Msa0268540 | 0.831324 | 1.780718e-55 | -8.615850e-47 |
| Msa0216010 | Msa0268540 | 0.808695 | 2.729973e-50 | -8.615850e-47 |
| Msa0221860 | Msa0268540 | 0.841794 | 3.828490e-58 | -8.615850e-47 |
| Msa0222070 | Msa0268540 | 0.838110 | 3.494260e-57 | -8.615850e-47 |
| Msa0222120 | Msa0268540 | 0.838930 | 2.145926e-57 | -8.615850e-47 |
| Msa0224960 | Msa0268540 | 0.819589 | 1.072741e-52 | -8.615850e-47 |
| Msa0225010 | Msa0268540 | 0.817300 | 3.541809e-52 | -8.615850e-47 |
| Msa0227290 | Msa0268540 | 0.832902 | 7.252325e-56 | -8.615850e-47 |
| Msa0253410 | Msa0268540 | 0.818816 | 1.608753e-52 | -8.615850e-47 |
| Msa0256170 | Msa0268540 | 0.801763 | 7.724189e-49 | -8.615850e-47 |
| Msa0263620 | Msa0268540 | 0.840657 | 7.621852e-58 | -8.615850e-47 |
| Msa0268180 | Msa0268540 | 0.930068 | 2.803917e-93 | -8.615850e-47 |
| Msa0268220 | Msa0268540 | 0.846449 | 2.156972e-59 | -8.615850e-47 |
| Msa0268340 | Msa0268540 | 0.843441 | 1.398595e-58 | -8.615850e-47 |
| Msa0268380 | Msa0268540 | 0.919876 | 2.600771e-87 | -8.615850e-47 |
| Msa0268420 | Msa0268540 | 0.940434 | 2.349091e-100 | -8.615850e-47 |
| Msa0268460 | Msa0268540 | 0.848069 | 7.750213e-60 | -8.615850e-47 |
| Msa0268500 | Msa0268540 | 0.850363 | 1.782072e-60 | -8.615850e-47 |
| Msa0268540 | Msa0268650 | 0.930316 | 1.956944e-93 | -8.615850e-47 |
| Msa0268540 | Msa0268680 | 0.803251 | 3.810456e-49 | -8.615850e-47 |
| Msa0268540 | Msa0268690 | 0.824465 | 7.956238e-54 | -8.615850e-47 |
| Msa0268540 | Msa0268730 | 0.912475 | 1.865986e-83 | -8.615850e-47 |
| Msa0268540 | Msa0268760 | 0.834436 | 3.000523e-56 | -8.615850e-47 |
| Msa0268540 | Msa0268850 | 0.927946 | 5.776428e-92 | -8.615850e-47 |
| Msa0268540 | Msa0268900 | 0.850911 | 1.249691e-60 | -8.615850e-47 |
| Msa0268540 | Msa0268930 | 0.908455 | 1.677423e-81 | -8.615850e-47 |
| Msa0268540 | Msa0269060 | 0.926792 | 2.879599e-91 | -8.615850e-47 |
| Msa0268540 | Msa0269100 | 0.846836 | 1.690743e-59 | -8.615850e-47 |
| Msa0268540 | Msa0284260 | 0.803814 | 2.913031e-49 | -8.615850e-47 |
| Msa0268540 | Msa0301460 | 0.829101 | 6.214449e-55 | -8.615850e-47 |
| Msa0268540 | Msa0301800 | 0.826305 | 2.918528e-54 | -8.615850e-47 |
| Msa0268540 | Msa0304870 | 0.816422 | 5.575153e-52 | -8.615850e-47 |
| Msa0268540 | Msa0306130 | 0.832640 | 8.422510e-56 | -8.615850e-47 |
| Msa0268540 | Msa0307490 | 0.818078 | 2.364737e-52 | -8.615850e-47 |
| Msa0268540 | Msa0307750 | 0.812337 | 4.461013e-51 | -8.615850e-47 |
| Msa0268540 | Msa0324060 | 0.802086 | 6.628792e-49 | -8.615850e-47 |
| Msa0268540 | Msa0338900 | 0.803704 | 3.069843e-49 | -8.615850e-47 |
| Msa0268540 | Msa0341260 | 0.815276 | 1.004342e-51 | -8.615850e-47 |
| Msa0268540 | Msa0344200 | 0.867834 | 1.021607e-65 | -8.615850e-47 |
| Msa0268540 | Msa0344240 | 0.812728 | 3.663174e-51 | -8.615850e-47 |
| Msa0268540 | Msa0344250 | 0.850512 | 1.618937e-60 | -8.615850e-47 |
| Msa0268540 | Msa0344290 | 0.833201 | 6.110984e-56 | -8.615850e-47 |
| Msa0268540 | Msa0365150 | 0.825990 | 3.466932e-54 | -8.615850e-47 |
| Msa0268540 | Msa0370510 | 0.803314 | 3.698302e-49 | -8.615850e-47 |
| Msa0268540 | Msa0377460 | 0.820326 | 7.275422e-53 | -8.615850e-47 |
| Msa0268540 | Msa0392410 | 0.807095 | 5.974791e-50 | -8.615850e-47 |
| Msa0268540 | Msa0392450 | 0.809157 | 2.174105e-50 | -8.615850e-47 |
| Msa0268540 | Msa0392480 | 0.800142 | 1.655752e-48 | -8.615850e-47 |
| Msa0268540 | Msa0417630 | 0.827266 | 1.720216e-54 | -8.615850e-47 |
| Msa0268540 | Msa0421800 | 0.813975 | 1.949835e-51 | -8.615850e-47 |
| Msa0268540 | Msa0426860 | 0.824443 | 8.051610e-54 | -8.615850e-47 |
| Msa0268540 | Msa0426890 | 0.819967 | 8.792481e-53 | -8.615850e-47 |
| Msa0268540 | Msa0427050 | 0.831465 | 1.643653e-55 | -8.615850e-47 |
| Msa0268540 | Msa0434630 | 0.813676 | 2.269436e-51 | -8.615850e-47 |
| Msa0268540 | Msa0437700 | 0.810217 | 1.286425e-50 | -8.615850e-47 |
| Msa0268540 | Msa0449930 | 0.808667 | 2.766668e-50 | -8.615850e-47 |
| Msa0268540 | Msa0456480 | 0.805584 | 1.243995e-49 | -8.615850e-47 |
| Msa0268540 | Msa0464500 | 0.823635 | 1.245894e-53 | -8.615850e-47 |
| Msa0268540 | Msa0467800 | 0.805457 | 1.322910e-49 | -8.615850e-47 |
| Msa0268540 | Msa0467880 | 0.802496 | 5.458527e-49 | -8.615850e-47 |
| Msa0268540 | Msa0473320 | 0.804613 | 1.986355e-49 | -8.615850e-47 |
| Msa0268540 | Msa0473450 | 0.825663 | 4.146991e-54 | -8.615850e-47 |
| Msa0268540 | Msa0482020 | 0.836214 | 1.067064e-56 | -8.615850e-47 |
| Msa0268540 | Msa0487560 | 0.816578 | 5.145745e-52 | -8.615850e-47 |
| Msa0268540 | Msa0487620 | 0.812584 | 3.940107e-51 | -8.615850e-47 |
| Msa0268540 | Msa0509960 | 0.801322 | 9.509703e-49 | -8.615850e-47 |
| Msa0268540 | Msa0514260 | 0.812994 | 3.203401e-51 | -8.615850e-47 |
| Msa0268540 | Msa0517400 | 0.816209 | 6.221533e-52 | -8.615850e-47 |
| Msa0268540 | Msa0524090 | 0.803874 | 2.831043e-49 | -8.615850e-47 |
| Msa0268540 | Msa0530210 | 0.812834 | 3.473381e-51 | -8.615850e-47 |
| Msa0268540 | Msa0536170 | 0.814409 | 1.563573e-51 | -8.615850e-47 |
| Msa0268540 | Msa0540340 | 0.819246 | 1.284495e-52 | -8.615850e-47 |
| Msa0268540 | Msa0547050 | 0.806126 | 9.570539e-50 | -8.615850e-47 |
| Msa0268540 | Msa0550720 | 0.811317 | 7.436589e-51 | -8.615850e-47 |
| Msa0268540 | Msa0558890 | 0.821103 | 4.824347e-53 | -8.615850e-47 |
| Msa0268540 | Msa0577140 | 0.815251 | 1.017129e-51 | -8.615850e-47 |
| Msa0268540 | Msa0577870 | 0.802936 | 4.427984e-49 | -8.615850e-47 |
| Msa0268540 | Msa0577910 | 0.800614 | 1.326861e-48 | -8.615850e-47 |
| Msa0268540 | Msa0582530 | 0.884675 | 1.565765e-71 | -8.615850e-47 |
| Msa0268540 | Msa0582570 | 0.851644 | 7.758378e-61 | -8.615850e-47 |
| Msa0268540 | Msa0582580 | 0.856852 | 2.431407e-62 | -8.615850e-47 |
| Msa0268540 | Msa0582620 | 0.909331 | 6.408975e-82 | -8.615850e-47 |
| Msa0268540 | Msa0582710 | 0.908007 | 2.735969e-81 | -8.615850e-47 |
| Msa0268540 | Msa0582740 | 0.900006 | 1.127095e-77 | -8.615850e-47 |
| Msa0268540 | Msa0582830 | 0.904952 | 7.164422e-80 | -8.615850e-47 |
| Msa0268540 | Msa0582900 | 0.898032 | 7.892685e-77 | -8.615850e-47 |
| Msa0268540 | Msa0582930 | 0.823064 | 1.693417e-53 | -8.615850e-47 |
| Msa0268540 | Msa0587060 | 0.805267 | 1.449780e-49 | -8.615850e-47 |
| Msa0268540 | Msa0591370 | 0.831279 | 1.826746e-55 | -8.615850e-47 |
| Msa0268540 | Msa0595780 | 0.827207 | 1.777469e-54 | -8.615850e-47 |
| Msa0268540 | Msa0601780 | 0.805425 | 1.343318e-49 | -8.615850e-47 |
| Msa0268540 | Msa0606060 | 0.813938 | 1.986598e-51 | -8.615850e-47 |
| Msa0268540 | Msa0606140 | 0.820788 | 5.699387e-53 | -8.615850e-47 |
| Msa0268540 | Msa0606680 | 0.801259 | 9.795407e-49 | -8.615850e-47 |
| Msa0268540 | Msa0614230 | 0.801609 | 8.305906e-49 | -8.615850e-47 |
| Msa0268540 | Msa0619060 | 0.818077 | 2.365549e-52 | -8.615850e-47 |
| Msa0268540 | Msa0622390 | 0.816930 | 4.290182e-52 | -8.615850e-47 |
| Msa0268540 | Msa0624240 | 0.825305 | 5.039841e-54 | -8.615850e-47 |
| Msa0268540 | Msa0626890 | 0.804793 | 1.821135e-49 | -8.615850e-47 |
| Msa0268540 | Msa0640880 | 0.815396 | 9.445890e-52 | -8.615850e-47 |
| Msa0268540 | Msa0647110 | 0.826506 | 2.613622e-54 | -8.615850e-47 |
| Msa0268540 | Msa0653710 | 0.803399 | 3.551988e-49 | -8.615850e-47 |
| Msa0268540 | Msa0654060 | 0.812409 | 4.301639e-51 | -8.615850e-47 |
| Msa0268540 | Msa0659640 | 0.803907 | 2.785970e-49 | -8.615850e-47 |
| Msa0268540 | Msa0662850 | 0.803356 | 3.625391e-49 | -8.615850e-47 |
| Msa0268540 | Msa0672350 | 0.807836 | 4.160703e-50 | -8.615850e-47 |
| Msa0268540 | Msa0681890 | 0.819958 | 8.834914e-53 | -8.615850e-47 |
| Msa0268540 | Msa0686610 | 0.814935 | 1.195814e-51 | -8.615850e-47 |
| Msa0268540 | Msa0698880 | 0.804710 | 1.895552e-49 | -8.615850e-47 |
| Msa0268540 | Msa0698900 | 0.813323 | 2.712798e-51 | -8.615850e-47 |
| Msa0268540 | Msa0702070 | 0.821419 | 4.078116e-53 | -8.615850e-47 |
| Msa0268540 | Msa0702120 | 0.818457 | 1.940455e-52 | -8.615850e-47 |
| Msa0268540 | Msa0704570 | 0.808134 | 3.595376e-50 | -8.615850e-47 |
| Msa0268540 | Msa0704750 | 0.810266 | 1.255621e-50 | -8.615850e-47 |
| Msa0268540 | Msa0704990 | 0.802224 | 6.209119e-49 | -8.615850e-47 |
| Msa0268540 | Msa0705030 | 0.811477 | 6.867194e-51 | -8.615850e-47 |
| Msa0268540 | Msa0705610 | 0.802756 | 4.823354e-49 | -8.615850e-47 |
| Msa0268540 | Msa0706710 | 0.823764 | 1.161933e-53 | -8.615850e-47 |
| Msa0268540 | Msa0708120 | 0.804134 | 2.499079e-49 | -8.615850e-47 |
| Msa0268540 | Msa0716670 | 0.817619 | 3.001962e-52 | -8.615850e-47 |
| Msa0268540 | Msa0727020 | 0.849613 | 2.889019e-60 | -8.615850e-47 |
| Msa0268540 | Msa0736330 | 0.802582 | 5.238691e-49 | -8.615850e-47 |
| Msa0268540 | Msa0736930 | 0.809002 | 2.345932e-50 | -8.615850e-47 |
| Msa0268540 | Msa0739570 | 0.821771 | 3.381256e-53 | -8.615850e-47 |
| Msa0268540 | Msa0766880 | 0.847864 | 8.828410e-60 | -8.615850e-47 |
| Msa0268540 | Msa0772210 | 0.846661 | 1.887647e-59 | -8.615850e-47 |
| Msa0268540 | Msa0782330 | 0.829673 | 4.514062e-55 | -8.615850e-47 |
| Msa0268540 | Msa0804930 | 0.833174 | 6.204916e-56 | -8.615850e-47 |
| Msa0268540 | Msa0819470 | 0.800399 | 1.468060e-48 | -8.615850e-47 |
| Msa0268540 | Msa0821490 | 0.812132 | 4.943487e-51 | -8.615850e-47 |
| Msa0268540 | Msa0851870 | 0.818565 | 1.834266e-52 | -8.615850e-47 |
| Msa0268540 | Msa0855490 | 0.835063 | 2.087142e-56 | -8.615850e-47 |
| Msa0268540 | Msa0860270 | 0.831030 | 2.102812e-55 | -8.615850e-47 |
| Msa0268540 | Msa0900320 | 0.836102 | 1.138976e-56 | -8.615850e-47 |
| Msa0268540 | Msa0910650 | 0.821461 | 3.989385e-53 | -8.615850e-47 |
| Msa0268540 | Msa0924820 | 0.820579 | 6.365644e-53 | -8.615850e-47 |
| Msa0268540 | Msa0924860 | 0.852936 | 3.328600e-61 | -8.615850e-47 |
| Msa0268540 | Msa0924890 | 0.834268 | 3.305818e-56 | -8.615850e-47 |
| Msa0268540 | Msa0925020 | 0.833729 | 4.510954e-56 | -8.615850e-47 |
| Msa0268540 | Msa0931090 | 0.935645 | 6.119008e-97 | -8.615850e-47 |
| Msa0268540 | Msa0931150 | 0.918880 | 9.019123e-87 | -8.615850e-47 |
| Msa0268540 | Msa0931200 | 0.847471 | 1.132465e-59 | -8.615850e-47 |
| Msa0268540 | Msa0931280 | 0.881603 | 2.092333e-70 | -8.615850e-47 |
| Msa0268540 | Msa0955310 | 0.812483 | 4.145564e-51 | -8.615850e-47 |
| Msa0268540 | Msa0958020 | 0.802729 | 4.886941e-49 | -8.615850e-47 |
| Msa0268540 | Msa0959970 | 0.809003 | 2.345765e-50 | -8.615850e-47 |
| Msa0268540 | Msa0965960 | 0.813925 | 2.000043e-51 | -8.615850e-47 |
| Msa0268540 | Msa0978000 | 0.806901 | 6.567402e-50 | -8.615850e-47 |
| Msa0268540 | Msa0983670 | 0.835255 | 1.866777e-56 | -8.615850e-47 |
| Msa0268540 | Msa0983710 | 0.878062 | 3.804240e-69 | -8.615850e-47 |
| Msa0268540 | Msa0992570 | 0.847949 | 8.366234e-60 | -8.615850e-47 |
| Msa0268540 | Msa0992590 | 0.832779 | 7.780807e-56 | -8.615850e-47 |
| Msa0268540 | Msa1002040 | 0.836141 | 1.113286e-56 | -8.615850e-47 |
| Msa0268540 | Msa1022310 | 0.808066 | 3.718054e-50 | -8.615850e-47 |
| Msa0268540 | Msa1024580 | 0.824598 | 7.402638e-54 | -8.615850e-47 |
| Msa0268540 | Msa1030280 | 0.839387 | 1.633251e-57 | -8.615850e-47 |
| Msa0268540 | Msa1033160 | 0.806732 | 7.131827e-50 | -8.615850e-47 |
| Msa0268540 | Msa1040770 | 0.829907 | 3.958234e-55 | -8.615850e-47 |
| Msa0268540 | Msa1049440 | 0.824763 | 6.768468e-54 | -8.615850e-47 |
| Msa0268540 | Msa1063180 | 0.800665 | 1.295692e-48 | -8.615850e-47 |
| Msa0268540 | Msa1070900 | 0.828655 | 7.968269e-55 | -8.615850e-47 |
| Msa0268540 | Msa1079610 | 0.821393 | 4.135592e-53 | -8.615850e-47 |
| Msa0268540 | Msa1086020 | 0.866442 | 2.843891e-65 | -8.615850e-47 |
| Msa0268540 | Msa1086060 | 0.916677 | 1.336124e-85 | -8.615850e-47 |
| Msa0268540 | Msa1086160 | 0.895555 | 8.576274e-76 | -8.615850e-47 |
| Msa0268540 | Msa1086170 | 0.923070 | 4.306728e-89 | -8.615850e-47 |
| Msa0268540 | Msa1086260 | 0.847725 | 9.639947e-60 | -8.615850e-47 |
| Msa0268540 | Msa1086290 | 0.909932 | 3.292601e-82 | -8.615850e-47 |
| Msa0268540 | Msa1086330 | 0.832661 | 8.321692e-56 | -8.615850e-47 |
| Msa0268540 | Msa1086340 | 0.845476 | 3.966026e-59 | -8.615850e-47 |
| Msa0268540 | Msa1086370 | 0.908454 | 1.679141e-81 | -8.615850e-47 |
| Msa0268540 | Msa1086410 | 0.802860 | 4.591452e-49 | -8.615850e-47 |
| Msa0268540 | Msa1086440 | 0.872752 | 2.498331e-67 | -8.615850e-47 |
| Msa0268540 | Msa1086480 | 0.887994 | 8.744068e-73 | -8.615850e-47 |
| Msa0268540 | Msa1086520 | 0.839638 | 1.405405e-57 | -8.615850e-47 |
| Msa0268540 | Msa1086630 | 0.862047 | 6.682595e-64 | -8.615850e-47 |
| Msa0268540 | Msa1086690 | 0.843911 | 1.047095e-58 | -8.615850e-47 |
| Msa0268540 | Msa1086830 | 0.861622 | 9.011299e-64 | -8.615850e-47 |
| Msa0268540 | Msa1086870 | 0.876217 | 1.663771e-68 | -8.615850e-47 |
| Msa0268540 | Msa1087000 | 0.805064 | 1.598831e-49 | -8.615850e-47 |
| Msa0268540 | Msa1090230 | 0.840096 | 1.067921e-57 | -8.615850e-47 |
| Msa0268540 | Msa1091690 | 0.877635 | 5.364957e-69 | -8.615850e-47 |
| Msa0268540 | Msa1120540 | 0.803595 | 3.234226e-49 | -8.615850e-47 |
| Msa0268540 | Msa1123340 | 0.812157 | 4.883519e-51 | -8.615850e-47 |
| Msa0268540 | Msa1124440 | 0.823291 | 1.499405e-53 | -8.615850e-47 |
| Msa0268540 | Msa1128350 | 0.829165 | 5.997298e-55 | -8.615850e-47 |
| Msa0268540 | Msa1130700 | 0.800138 | 1.659156e-48 | -8.615850e-47 |
| Msa0268540 | Msa1132540 | 0.810932 | 9.011960e-51 | -8.615850e-47 |
| Msa0268540 | Msa1143140 | 0.910325 | 2.125015e-82 | -8.615850e-47 |
| Msa0268540 | Msa1143150 | 0.835686 | 1.451995e-56 | -8.615850e-47 |
| Msa0268540 | Msa1157160 | 0.831223 | 1.885107e-55 | -8.615850e-47 |
| Msa0268540 | Msa1166180 | 0.807123 | 5.894635e-50 | -8.615850e-47 |
| Msa0268540 | Msa1166280 | 0.805895 | 1.070264e-49 | -8.615850e-47 |
| Msa0268540 | Msa1173410 | 0.818228 | 2.186748e-52 | -8.615850e-47 |
| Msa0268540 | Msa1195860 | 0.838810 | 2.305357e-57 | -8.615850e-47 |
| Msa0268540 | Msa1198420 | 0.815919 | 7.222235e-52 | -8.615850e-47 |
| Msa0268540 | Msa1199690 | 0.814611 | 1.410485e-51 | -8.615850e-47 |
| Msa0268540 | Msa1208510 | 0.803552 | 3.301504e-49 | -8.615850e-47 |
| Msa0268540 | Msa1209390 | 0.839061 | 1.985180e-57 | -8.615850e-47 |
| Msa0268540 | Msa1209650 | 0.809670 | 1.687126e-50 | -8.615850e-47 |
| Msa0268540 | Msa1218720 | 0.805865 | 1.086208e-49 | -8.615850e-47 |
| Msa0268540 | Msa1220740 | 0.821864 | 3.218885e-53 | -8.615850e-47 |
| Msa0268540 | Msa1248400 | 0.821308 | 4.326864e-53 | -8.615850e-47 |
| Msa0268540 | Msa1284030 | 0.832261 | 1.045473e-55 | -8.615850e-47 |
| Msa0268540 | Msa1298740 | 0.837305 | 5.620845e-57 | -8.615850e-47 |
| Msa0268540 | Msa1300880 | 0.806344 | 8.608035e-50 | -8.615850e-47 |
| Msa0268540 | Msa1302920 | 0.818919 | 1.524137e-52 | -8.615850e-47 |
| Msa0268540 | Msa1309910 | 0.826808 | 2.213294e-54 | -8.615850e-47 |
| Msa0268540 | Msa1323060 | 0.817845 | 2.669181e-52 | -8.615850e-47 |
| Msa0268540 | Msa1325650 | 0.800447 | 1.434909e-48 | -8.615850e-47 |
| Msa0268540 | Msa1327820 | 0.838975 | 2.088586e-57 | -8.615850e-47 |
| Msa0268540 | Msa1330240 | 0.800450 | 1.433301e-48 | -8.615850e-47 |
| Msa0268540 | Msa1334650 | 0.815240 | 1.023052e-51 | -8.615850e-47 |
| Msa0268540 | Msa1339250 | 0.813799 | 2.132150e-51 | -8.615850e-47 |
| Msa0268540 | Msa1342030 | 0.802047 | 6.751184e-49 | -8.615850e-47 |
| Msa0268540 | Msa1351560 | 0.808290 | 3.331190e-50 | -8.615850e-47 |
| Msa0268540 | Msa1352820 | 0.819005 | 1.457095e-52 | -8.615850e-47 |
| Msa0268540 | Msa1354850 | 0.877006 | 8.881929e-69 | -8.615850e-47 |
| Msa0268540 | Msa1354890 | 0.903096 | 4.935458e-79 | -8.615850e-47 |
| Msa0268540 | Msa1354930 | 0.802792 | 4.741052e-49 | -8.615850e-47 |
| Msa0268540 | Msa1355020 | 0.854784 | 9.774240e-62 | -8.615850e-47 |
| Msa0268540 | Msa1355060 | 0.900924 | 4.500216e-78 | -8.615850e-47 |
| Msa0268540 | Msa1365210 | 0.819088 | 1.395459e-52 | -8.615850e-47 |
| Msa0268540 | Msa1367810 | 0.818660 | 1.745895e-52 | -8.615850e-47 |
| Msa0268540 | Msa1367940 | 0.819578 | 1.078849e-52 | -8.615850e-47 |
| Msa0268540 | Msa1368730 | 0.803660 | 3.134853e-49 | -8.615850e-47 |
| Msa0268540 | Msa1371250 | 0.831660 | 1.471870e-55 | -8.615850e-47 |
| Msa0268540 | Msa1379370 | 0.803274 | 3.768927e-49 | -8.615850e-47 |
| Msa0268540 | Msa1380540 | 0.852554 | 4.277666e-61 | -8.615850e-47 |
| Msa0268540 | Msa1380580 | 0.833180 | 6.185061e-56 | -8.615850e-47 |
| Msa0268540 | Msa1381130 | 0.804884 | 1.743675e-49 | -8.615850e-47 |
| Msa0268540 | Msa1385940 | 0.833746 | 4.467471e-56 | -8.615850e-47 |
| Msa0268540 | Msa1387090 | 0.825190 | 5.366304e-54 | -8.615850e-47 |
| Msa0268540 | Msa1394050 | 0.817181 | 3.767876e-52 | -8.615850e-47 |
| Msa0268540 | Msa1394090 | 0.860098 | 2.616200e-63 | -8.615850e-47 |
| Msa0268540 | Msa1394100 | 0.846256 | 2.435209e-59 | -8.615850e-47 |
| Msa0268540 | Msa1394140 | 0.889171 | 3.075442e-73 | -8.615850e-47 |
| Msa0268540 | Msa1394170 | 0.843768 | 1.143479e-58 | -8.615850e-47 |
| Msa0268540 | Msa1394240 | 0.887150 | 1.836738e-72 | -8.615850e-47 |
| Msa0268540 | Msa1394280 | 0.844928 | 5.577932e-59 | -8.615850e-47 |
| Msa0268540 | Msa1406230 | 0.822532 | 2.252056e-53 | -8.615850e-47 |
| Msa0268540 | Msa1415120 | 0.831922 | 1.268466e-55 | -8.615850e-47 |
| Msa0268540 | Msa1422750 | 0.814197 | 1.741376e-51 | -8.615850e-47 |
| Msa0268540 | Msa1424240 | 0.802903 | 4.497957e-49 | -8.615850e-47 |
| Msa0268540 | Msa1426870 | 0.823911 | 1.073284e-53 | -8.615850e-47 |
| Msa0268540 | Msa1430940 | 0.807677 | 4.497457e-50 | -8.615850e-47 |
| Msa0268540 | Msa1435470 | 0.812933 | 3.303311e-51 | -8.615850e-47 |
| Msa0268540 | Msa1438420 | 0.808719 | 2.697302e-50 | -8.615850e-47 |
| Msa0268540 | Msa1439800 | 0.809218 | 2.109339e-50 | -8.615850e-47 |
| Msa0268540 | Msa1442300 | 0.811598 | 6.461512e-51 | -8.615850e-47 |
| Msa0268540 | Msa1449680 | 0.802830 | 4.658049e-49 | -8.615850e-47 |
| Msa0268540 | Msa1458920 | 0.808378 | 3.189638e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268540 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa0268540 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa0268540 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268540 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
| Msa0268540 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 2_2:+70300602 | None:intergenic |
| ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 2_2:-70300705 | None:intergenic |
| AATGATCCAGGACGTAATCC+TGG | 0.474800 | 2_2:+70301252 | Msa0268540:CDS |
| GGATTCCTATCTAATGATCC+AGG | 0.536202 | 2_2:+70301240 | Msa0268540:CDS |
| TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 2_2:-70301258 | None:intergenic |
| TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 2_2:-70301245 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCCAAATATTAAAATTTT+TGG | + | chr2_2:70300892-70300911 | Msa0268540:intron | 10.0% |
| !!! | TATCCAAAAATTTTAATATT+TGG | - | chr2_2:70300898-70300917 | None:intergenic | 10.0% |
| !! | ATTTCAAAAAAAAAAAACTT+AGG | - | chr2_2:70301049-70301068 | None:intergenic | 10.0% |
| !!! | AATTTTAATATTTGGAATCA+AGG | - | chr2_2:70300890-70300909 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTAATTATCT+TGG | + | chr2_2:70301144-70301163 | Msa0268540:intron | 15.0% |
| !! | GAAAAAACTACTTGAATAAA+GGG | - | chr2_2:70300649-70300668 | None:intergenic | 20.0% |
| !! | AGAAAAAACTACTTGAATAA+AGG | - | chr2_2:70300650-70300669 | None:intergenic | 20.0% |
| !!! | TTATTCAAGTAGTTTTTTCT+TGG | + | chr2_2:70300650-70300669 | Msa0268540:CDS | 20.0% |
| !! | TGAAAATTCTATTATTCGAT+TGG | + | chr2_2:70300936-70300955 | Msa0268540:intron | 20.0% |
| !!! | TGTGGATATGAAAAAAATTT+TGG | + | chr2_2:70300987-70301006 | Msa0268540:intron | 20.0% |
| !! | TCTTATAAACTTAGTATCAA+AGG | + | chr2_2:70301078-70301097 | Msa0268540:intron | 20.0% |
| !!! | TTTTTCTCTTAGCTTTTGTT+TGG | + | chr2_2:70300742-70300761 | Msa0268540:CDS | 25.0% |
| !!! | TTTGTTTCTCTTTTCATCTT+CGG | + | chr2_2:70301219-70301238 | Msa0268540:CDS | 25.0% |
| ! | AATTGGATTCAAAAAAGCGT+AGG | - | chr2_2:70300691-70300710 | None:intergenic | 30.0% |
| ACTGGCATAAAATCTACAAT+TGG | - | chr2_2:70300708-70300727 | None:intergenic | 30.0% | |
| !! | AAAAAGAGTAAGGGTATTAC+TGG | - | chr2_2:70300726-70300745 | None:intergenic | 30.0% |
| GCTAAGAGAAAAAAGAGTAA+GGG | - | chr2_2:70300735-70300754 | None:intergenic | 30.0% | |
| AGCTAAGAGAAAAAAGAGTA+AGG | - | chr2_2:70300736-70300755 | None:intergenic | 30.0% | |
| !! | AATCAAGATCTAGGTATTGG+TGG | - | chr2_2:70300968-70300987 | None:intergenic | 35.0% |
| CACAATCAAGATCTAGGTAT+TGG | - | chr2_2:70300971-70300990 | None:intergenic | 35.0% | |
| CAATACCTAGATCTTGATTG+TGG | + | chr2_2:70300969-70300988 | Msa0268540:intron | 35.0% | |
| CATATCCACAATCAAGATCT+AGG | - | chr2_2:70300977-70300996 | None:intergenic | 35.0% | |
| GAGAATCTATTCTCTTTCTC+TGG | + | chr2_2:70301121-70301140 | Msa0268540:intron | 35.0% | |
| ! | TTCAAAAAAGCGTAGGCTTC+AGG | - | chr2_2:70300684-70300703 | None:intergenic | 40.0% |
| GGATTCCTATCTAATGATCC+AGG | + | chr2_2:70301240-70301259 | Msa0268540:CDS | 40.0% | |
| TACGTCCTGGATCATTAGAT+AGG | - | chr2_2:70301248-70301267 | None:intergenic | 40.0% | |
| !! | CAAGATCTAGGTATTGGTGG+TGG | - | chr2_2:70300965-70300984 | None:intergenic | 45.0% |
| AATGATCCAGGACGTAATCC+TGG | + | chr2_2:70301252-70301271 | Msa0268540:CDS | 45.0% | |
| !!! | AATAAATTCTTAATTTTTTT+CGG | - | chr2_2:70300813-70300832 | None:intergenic | 5.0% |
| TCACGTCCAGGATTACGTCC+TGG | - | chr2_2:70301261-70301280 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70300603 | 70301287 | 70300603 | ID=Msa0268540;Name=Msa0268540 |
| chr2_2 | mRNA | 70300603 | 70301287 | 70300603 | ID=Msa0268540-mRNA-1;Parent=Msa0268540;Name=Msa0268540-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
| chr2_2 | exon | 70300603 | 70300777 | 70300603 | ID=Msa0268540-mRNA-1:exon:22604;Parent=Msa0268540-mRNA-1 |
| chr2_2 | exon | 70301169 | 70301287 | 70301169 | ID=Msa0268540-mRNA-1:exon:22605;Parent=Msa0268540-mRNA-1 |
| chr2_2 | CDS | 70300603 | 70300777 | 70300603 | ID=Msa0268540-mRNA-1:cds;Parent=Msa0268540-mRNA-1 |
| chr2_2 | CDS | 70301169 | 70301287 | 70301169 | ID=Msa0268540-mRNA-1:cds;Parent=Msa0268540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
