AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1020500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020500 MtrunA17_Chr7g0220721 94.789 403 11 4 1 400 1 396 0.0 782
Msa1020500 MtrunA17_Chr4g0072871 40.441 408 160 13 24 400 20 375 4.34e-80 251
Msa1020500 MtrunA17_Chr1g0150471 38.701 385 154 12 24 399 4 315 1.25e-74 235
Msa1020500 MtrunA17_Chr3g0136701 39.535 387 124 12 23 399 3 289 7.23e-69 219
Msa1020500 MtrunA17_Chr7g0251781 27.692 390 233 13 26 375 5 385 4.37e-22 97.1
Msa1020500 MtrunA17_Chr4g0033641 43.478 92 43 1 26 108 5 96 1.45e-18 84.3
Msa1020500 MtrunA17_Chr4g0033641 39.474 76 40 1 69 138 5 80 2.70e-11 63.2
Msa1020500 MtrunA17_Chr1g0155811 41.935 93 44 1 26 108 5 97 5.29e-18 83.6
Msa1020500 MtrunA17_Chr5g0405151 48.750 80 33 1 26 97 5 84 6.80e-18 81.3
Msa1020500 MtrunA17_Chr5g0429341 42.857 91 52 0 26 116 5 95 2.14e-17 83.6
Msa1020500 MtrunA17_Chr2g0314671 43.011 93 44 1 26 109 5 97 2.21e-17 82.0
Msa1020500 MtrunA17_Chr7g0268691 35.088 114 66 3 23 132 17 126 3.98e-17 82.4
Msa1020500 MtrunA17_Chr2g0329511 40.217 92 46 1 26 108 5 96 1.67e-16 78.6
Msa1020500 MtrunA17_Chr2g0329511 50.000 50 25 0 69 118 5 54 5.94e-11 62.4
Msa1020500 MtrunA17_Chr3g0142221 33.333 111 63 1 26 125 5 115 2.69e-15 74.7
Msa1020500 MtrunA17_Chr4g0035651 38.710 93 47 1 26 108 5 97 1.31e-14 72.8
Msa1020500 MtrunA17_Chr3g0120711 41.758 91 52 1 26 116 5 94 1.95e-14 74.3
Msa1020500 MtrunA17_Chr3g0145061 35.417 96 52 1 26 111 5 100 1.43e-13 69.7
Msa1020500 MtrunA17_Chr8g0390971 31.383 188 94 4 204 374 232 401 2.08e-12 68.2
Msa1020500 MtrunA17_Chr1g0209071 37.838 74 46 0 24 97 3 76 1.01e-11 65.9
Msa1020500 MtrunA17_Chr2g0322951 64.444 45 16 0 328 372 89 133 1.27e-11 62.4
Msa1020500 MtrunA17_Chr2g0322941 35.165 91 59 0 16 106 34 124 5.06e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020500 AT3G02380.1 54.774 398 105 11 19 400 9 347 9.92e-130 377
Msa1020500 AT5G15840.1 52.284 394 135 13 23 400 17 373 1.27e-116 345
Msa1020500 AT5G15850.1 51.990 402 128 9 16 400 2 355 3.52e-115 340
Msa1020500 AT5G57660.1 43.445 389 157 14 23 400 19 355 1.73e-76 241
Msa1020500 AT5G24930.1 39.750 400 179 10 23 400 3 362 9.05e-75 237
Msa1020500 AT2G24790.1 39.833 359 126 12 20 375 2 273 1.27e-70 224
Msa1020500 AT5G15840.2 47.826 276 100 9 23 289 17 257 1.77e-63 205
Msa1020500 AT2G24790.2 42.857 182 78 5 20 198 2 160 7.95e-41 144
Msa1020500 AT1G78600.1 44.565 92 42 1 26 108 5 96 1.69e-18 85.9
Msa1020500 AT1G78600.2 44.565 92 42 1 26 108 5 96 1.94e-18 85.9
Msa1020500 AT1G06040.1 43.478 92 43 1 26 108 5 96 2.69e-17 81.3
Msa1020500 AT2G21320.1 47.500 80 34 1 26 97 5 84 5.71e-17 78.6
Msa1020500 AT2G47890.3 38.710 93 55 1 24 116 11 101 6.14e-17 81.3
Msa1020500 AT1G06040.2 43.478 92 43 1 26 108 5 96 8.57e-17 78.2
Msa1020500 AT2G47890.2 38.710 93 55 1 24 116 11 101 1.08e-16 79.3
Msa1020500 AT2G47890.1 38.710 93 55 1 24 116 11 101 1.19e-16 80.9
Msa1020500 AT2G47890.1 51.852 54 26 0 322 375 278 331 7.84e-11 63.5
Msa1020500 AT4G38960.1 45.000 80 36 1 26 97 5 84 1.55e-16 77.8
Msa1020500 AT4G38960.6 45.000 80 36 1 26 97 5 84 1.55e-16 77.8
Msa1020500 AT2G33500.1 34.127 126 75 2 25 150 11 128 4.58e-16 79.7
Msa1020500 AT2G33500.1 63.043 46 17 0 330 375 356 401 1.12e-11 66.2
Msa1020500 AT2G33500.2 34.127 126 75 2 25 150 11 128 4.77e-16 79.7
Msa1020500 AT2G33500.2 63.043 46 17 0 330 375 355 400 1.12e-11 66.2
Msa1020500 AT2G31380.1 40.217 92 46 1 26 108 5 96 7.06e-16 77.0
Msa1020500 AT1G75540.1 37.895 95 47 1 26 108 5 99 9.29e-16 78.2
Msa1020500 AT1G28050.1 35.922 103 63 1 26 128 9 108 1.57e-14 75.5
Msa1020500 AT5G48250.1 39.785 93 54 1 26 116 5 97 4.72e-14 73.6
Msa1020500 AT3G07650.3 43.056 72 41 0 26 97 5 76 9.97e-13 69.3
Msa1020500 AT3G07650.2 43.056 72 41 0 26 97 5 76 9.97e-13 69.3
Msa1020500 AT3G07650.4 43.056 72 41 0 26 97 5 76 9.97e-13 69.3
Msa1020500 AT3G07650.1 43.056 72 41 0 26 97 5 76 9.97e-13 69.3
Msa1020500 AT1G68190.2 34.000 100 61 2 24 123 41 135 1.12e-12 69.3
Msa1020500 AT1G68190.1 34.000 100 61 2 24 123 12 106 1.38e-12 68.9
Msa1020500 AT1G68190.3 34.000 100 61 2 24 123 12 106 1.38e-12 68.9
Msa1020500 AT1G68520.1 35.484 124 74 3 256 376 282 402 1.82e-12 68.9
Msa1020500 AT1G73870.1 65.957 47 16 0 330 376 344 390 2.28e-12 68.6
Msa1020500 AT4G15250.1 35.714 84 54 0 26 109 5 88 2.82e-12 67.8
Msa1020500 AT1G25440.1 37.037 135 66 3 249 373 278 403 4.85e-12 67.8
Msa1020500 AT4G10240.1 34.694 98 45 2 26 108 5 98 6.20e-12 63.9
Msa1020500 AT3G21880.1 35.165 91 57 1 26 116 5 93 1.61e-11 65.9
Msa1020500 AT3G21880.3 35.165 91 57 1 26 116 9 97 1.67e-11 65.9
Msa1020500 AT3G21880.2 35.165 91 57 1 26 116 9 97 1.67e-11 65.9
Msa1020500 AT5G14370.1 47.619 63 33 0 313 375 276 338 3.94e-11 64.3
Msa1020500 AT4G39070.1 36.559 93 49 1 26 108 5 97 4.13e-11 63.2

Find 123 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGTTTGTTTGTCAATTT+TGG 0.123201 7_1:+44039755 None:intergenic
GTCCCGATTCTTCCAATTTC+GGG 0.189546 7_1:-44039387 Msa1020500:CDS
TTGACGAAATTACAGTAATT+TGG 0.192997 7_1:+44036817 None:intergenic
CTCATCATGATGAGTATTAT+TGG 0.214592 7_1:+44039041 None:intergenic
CTTCATCTTCGGCACCTAAA+AGG 0.221370 7_1:+44039340 None:intergenic
TGAAATGATGTTAAACAAAA+TGG 0.230587 7_1:-44036936 Msa1020500:three_prime_UTR
AATAGGTCAATTGTTCCTTT+TGG 0.257022 7_1:+44037215 None:intergenic
TGTCCCGATTCTTCCAATTT+CGG 0.284602 7_1:-44039388 Msa1020500:CDS
GAATAGGTCATGGTTGATTC+TGG 0.297791 7_1:+44037245 None:intergenic
GAAACTCGGCCGCGTATAAA+AGG 0.298232 7_1:-44037056 Msa1020500:CDS
ATATATTGACACAATATAAA+AGG 0.303540 7_1:-44036495 Msa1020500:three_prime_UTR
TGGTAATAGTAAAGCATAAA+TGG 0.319913 7_1:+44036728 None:intergenic
TTGTTATTGATGTTCTTTAG+AGG 0.325161 7_1:+44039204 None:intergenic
TAAGTGCATGTTTGAATTGA+TGG 0.328168 7_1:-44036904 Msa1020500:three_prime_UTR
CCAATTTCGGGTTACCTATA+CGG 0.340122 7_1:-44039375 Msa1020500:CDS
ATGAAAATGAAGCTGCTTCA+TGG 0.340820 7_1:-44039239 Msa1020500:CDS
CTCTATCCATTGGAGAGAAA+TGG 0.342666 7_1:+44037165 None:intergenic
GAAAATTTGAGAAAACAATT+AGG 0.345101 7_1:-44037103 Msa1020500:CDS
GGCTTTGTCGGCGGTGGTTG+TGG 0.350451 7_1:-44039318 Msa1020500:CDS
CATAATCAAGAGGGTAATAA+TGG 0.353323 7_1:-44039147 Msa1020500:CDS
TTTAACATCATTTCAGAAAG+AGG 0.365033 7_1:+44036944 None:intergenic
CTAATTACAGAAGTTGGATA+TGG 0.366492 7_1:-44036975 Msa1020500:CDS
CCGTATAGGTAACCCGAAAT+TGG 0.367447 7_1:+44039375 None:intergenic
CTCTCTGTACCTTAGGACTT+TGG 0.375434 7_1:+44037139 None:intergenic
TGGGAAGACATTTGAATAGA+AGG 0.383605 7_1:+44037185 None:intergenic
CAACAACAACAAGATCATTA+TGG 0.386116 7_1:-44039012 Msa1020500:CDS
GACACAATATAAAAGGATAA+TGG 0.398986 7_1:-44036488 Msa1020500:three_prime_UTR
GTCGGCGGTGGTTGTGGTGG+TGG 0.399578 7_1:-44039312 Msa1020500:CDS
GAATAGAAGGACCTGAAAAT+AGG 0.406008 7_1:+44037198 None:intergenic
CCTCAGCCACAGCCACTATA+AGG 0.407249 7_1:-44039683 Msa1020500:CDS
TGGTTGTGAGGTGGAGGAAG+AGG 0.415419 7_1:-44039292 Msa1020500:CDS
TGGTGGTGGTTGTGAGGTGG+AGG 0.415856 7_1:-44039298 Msa1020500:CDS
CCTTATAGTGGCTGTGGCTG+AGG 0.420270 7_1:+44039683 None:intergenic
TAACCCGAAATTGGAAGAAT+CGG 0.422897 7_1:+44039384 None:intergenic
GAGTTTGAGTCTTCCAAAGC+TGG 0.426808 7_1:-44038910 Msa1020500:CDS
GAAGAATCGGGACACGTTGA+TGG 0.431550 7_1:+44039397 None:intergenic
TCAGGTTTCAGTTTCATCAA+TGG 0.434568 7_1:-44037282 Msa1020500:intron
TATCCATGAGTGTATTACTT+TGG 0.436981 7_1:-44036443 Msa1020500:three_prime_UTR
AAATCTTGCTCCAACATTTG+TGG 0.438282 7_1:+44039717 None:intergenic
ATTGTAACTGAATCCAGCTT+TGG 0.441148 7_1:+44038897 None:intergenic
TGTACCTGCTGTTGTTGAAC+AGG 0.442029 7_1:+44038952 None:intergenic
TGAAGGTGTTGATCATGATA+TGG 0.443702 7_1:-44039265 Msa1020500:CDS
GATGAAGGCTTTGTCGGCGG+TGG 0.445280 7_1:-44039324 Msa1020500:CDS
ATTACTGTAATTTCGTCAAA+CGG 0.446563 7_1:-44036813 Msa1020500:three_prime_UTR
TCTATCCATTGGAGAGAAAT+GGG 0.447374 7_1:+44037166 None:intergenic
GTCTTCCCATTTCTCTCCAA+TGG 0.450964 7_1:-44037171 Msa1020500:CDS
ACATCACTAATTACAGAAGT+TGG 0.453991 7_1:-44036981 Msa1020500:CDS
TTCATCTTCGGCACCTAAAA+GGG 0.458034 7_1:+44039341 None:intergenic
GCCGACAAAGCCTTCATCTT+CGG 0.465052 7_1:+44039329 None:intergenic
TGAGGCCTGCGAGCGTGCCC+CGG 0.465827 7_1:-44039505 Msa1020500:CDS
TTGTGGTGGTGGTTGTGAGG+TGG 0.465870 7_1:-44039301 Msa1020500:CDS
ACTTTGGCTTCTCTATCCAT+TGG 0.469238 7_1:+44037155 None:intergenic
TGGAGAAGTTGATGAGTACT+TGG 0.471287 7_1:-44039112 Msa1020500:CDS
TGCTCCAACATTTGTGGAGA+GGG 0.475498 7_1:+44039723 None:intergenic
GCCGAAGATGAAGGCTTTGT+CGG 0.477058 7_1:-44039330 Msa1020500:CDS
GTGGAGGAAGAGGAGGATGA+AGG 0.479258 7_1:-44039282 Msa1020500:CDS
TCAGTTTCATCAATGGATGT+TGG 0.481745 7_1:-44037275 Msa1020500:CDS
TGATGTTAAACAAAATGGCC+AGG 0.485809 7_1:-44036931 Msa1020500:three_prime_UTR
AGTGGCTGTGGCTGAGGTGG+TGG 0.491586 7_1:+44039689 None:intergenic
AGTGTTAAGGAAGTTCAAAT+AGG 0.491879 7_1:+44039784 None:intergenic
TGGAGGTCTTGAATAGGTCA+TGG 0.494897 7_1:+44037235 None:intergenic
TTACTGTAATTTCGTCAAAC+GGG 0.504207 7_1:-44036812 Msa1020500:three_prime_UTR
AAAATACAAAAGCTATATGA+TGG 0.510161 7_1:+44036465 None:intergenic
AAACAATTAGGTATGCTTCA+AGG 0.513566 7_1:-44037091 Msa1020500:CDS
CGCAGACCTTATAGTGGCTG+TGG 0.517868 7_1:+44039677 None:intergenic
AACCCGAAATTGGAAGAATC+GGG 0.527364 7_1:+44039385 None:intergenic
TGGTTGTGGTGGTGGTTGTG+AGG 0.528945 7_1:-44039304 Msa1020500:CDS
TTAACATCATTTCAGAAAGA+GGG 0.529345 7_1:+44036945 None:intergenic
GGGTGGCCGGAGGACCGTAT+AGG 0.530363 7_1:+44039361 None:intergenic
CTTTACAAAGAAAAGCCGCC+GGG 0.532716 7_1:+44039487 None:intergenic
TTTGTCGGCGGTGGTTGTGG+TGG 0.539334 7_1:-44039315 Msa1020500:CDS
CAAACATGCACTTAGTTCCC+TGG 0.544679 7_1:+44036913 None:intergenic
CTGTGGCTGAGGTGGTGGTG+AGG 0.545540 7_1:+44039694 None:intergenic
ACCTATTCAAGACCTCCAAA+AGG 0.546280 7_1:-44037230 Msa1020500:CDS
GCGCGGCAGAAAACCGCGCA+TGG 0.548669 7_1:+44039615 None:intergenic
CGTTGATGGCGGCTTGCAAG+AGG 0.550196 7_1:+44039411 None:intergenic
TCAAATATACACTAAGGAGA+AGG 0.556269 7_1:-44036781 Msa1020500:three_prime_UTR
AACTTCTGTAATTAGTGATG+TGG 0.558143 7_1:+44036983 None:intergenic
TTAGTGTATATTTGAAAGCA+CGG 0.559419 7_1:+44036789 None:intergenic
CTTGTTGATTGCAATTCTTG+TGG 0.560089 7_1:-44039087 Msa1020500:CDS
TTGTGAGGTGGAGGAAGAGG+AGG 0.565784 7_1:-44039289 Msa1020500:CDS
GTTGATTGCAATTCTTGTGG+TGG 0.567048 7_1:-44039084 Msa1020500:CDS
CTCCAACATTTGTGGAGAGG+GGG 0.567790 7_1:+44039725 None:intergenic
TCACCAAAGTAATACACTCA+TGG 0.568692 7_1:+44036440 None:intergenic
AATAACAACAACATTAGTAA+TGG 0.570310 7_1:-44039171 Msa1020500:CDS
TATAGTGGCTGTGGCTGAGG+TGG 0.573370 7_1:+44039686 None:intergenic
TGTTCCTGTTCAACAACAGC+AGG 0.577069 7_1:-44038956 Msa1020500:CDS
AGCATGTGACACGTGCCGCT+CGG 0.577146 7_1:-44039640 Msa1020500:CDS
GTGCTTTCAAATATACACTA+AGG 0.578909 7_1:-44036787 Msa1020500:three_prime_UTR
GTTCGTGCCTCGAGGCTACA+CGG 0.579119 7_1:+44039541 None:intergenic
GCGGCAGAAAACCGCGCATG+GGG 0.588981 7_1:+44039617 None:intergenic
GCTTTACAAAGAAAAGCCGC+CGG 0.590036 7_1:+44039486 None:intergenic
GGGTTACCTATACGGTCCTC+CGG 0.593643 7_1:-44039367 Msa1020500:CDS
ATAGAGAAGCCAAAGTCCTA+AGG 0.594326 7_1:-44037148 Msa1020500:CDS
CGTTGCCGCAGACCTTATAG+TGG 0.597128 7_1:+44039671 None:intergenic
TATAAGGTCTGCGGCAACGT+GGG 0.603915 7_1:-44039667 Msa1020500:CDS
AAACCGCGCATGGGGCCGAG+CGG 0.610346 7_1:+44039625 None:intergenic
GCTCCAACATTTGTGGAGAG+GGG 0.610704 7_1:+44039724 None:intergenic
TTGCTCCAACATTTGTGGAG+AGG 0.611435 7_1:+44039722 None:intergenic
ACGCGGCCGAGTTTCAGCAT+AGG 0.616320 7_1:+44037064 None:intergenic
TAGTAATGGTCATAATCAAG+AGG 0.620606 7_1:-44039157 Msa1020500:CDS
GGAAAGCCTATGCTGAAACT+CGG 0.623923 7_1:-44037070 Msa1020500:CDS
AAAGCTGGATTCAGTTACAA+TGG 0.625769 7_1:-44038895 Msa1020500:CDS
AGTAATGGTCATAATCAAGA+GGG 0.628469 7_1:-44039156 Msa1020500:CDS
GTTGATGGCGGCTTGCAAGA+GGG 0.631032 7_1:+44039412 None:intergenic
GTGGATATCAGCATCACAAG+TGG 0.632088 7_1:+44039443 None:intergenic
AGGCTACACGGTTTGCCGCG+TGG 0.644154 7_1:+44039553 None:intergenic
ATCTTCGGCACCTAAAAGGG+TGG 0.644787 7_1:+44039344 None:intergenic
GTGGATGCGTGCATCACACG+CGG 0.646833 7_1:+44039572 None:intergenic
CACAGCCACTATAAGGTCTG+CGG 0.649656 7_1:-44039676 Msa1020500:CDS
GATGTTAAACAAAATGGCCA+GGG 0.650288 7_1:-44036930 Msa1020500:three_prime_UTR
CTATAAGGTCTGCGGCAACG+TGG 0.652443 7_1:-44039668 Msa1020500:CDS
TTGCAAGAGGGTTAGCAGAG+TGG 0.655218 7_1:+44039424 None:intergenic
GAAGATGAAGGCTTTGTCGG+CGG 0.655301 7_1:-44039327 Msa1020500:CDS
CACAAGAATTGCAATCAACA+AGG 0.655647 7_1:+44039088 None:intergenic
GCTGGATTCAGTTACAATGG+TGG 0.656212 7_1:-44038892 Msa1020500:CDS
GAATCGGGACACGTTGATGG+CGG 0.662257 7_1:+44039400 None:intergenic
ACAGTATTAGTAGAAAGACT+TGG 0.669242 7_1:+44036708 None:intergenic
GTGTGATGCACGCATCCACG+CGG 0.684344 7_1:-44039568 Msa1020500:CDS
CGGCAAACCGTGTAGCCTCG+AGG 0.686538 7_1:-44039548 Msa1020500:CDS
ATAAATATGCCGAATCTGCG+CGG 0.687353 7_1:+44039598 None:intergenic
TTTACAAAGAAAAGCCGCCG+GGG 0.712447 7_1:+44039488 None:intergenic
CCAGACGCGTTCGTGCCTCG+AGG 0.721870 7_1:+44039533 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGAAATATTTATCTTTA+AGG - chr7_1:44038513-44038532 Msa1020500:intron 10.0%
!! ATTGAAATATTTATCTTTAA+GGG - chr7_1:44038514-44038533 Msa1020500:intron 10.0%
!! TTACTTAAAAGTGAAAATAA+TGG - chr7_1:44037613-44037632 Msa1020500:intron 15.0%
!! TTAAAATTCATAAAGTTTGA+GGG + chr7_1:44037777-44037796 None:intergenic 15.0%
!!! TTTTATGAAATTGTTGAAAA+TGG + chr7_1:44038022-44038041 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG - chr7_1:44038182-44038201 Msa1020500:intron 15.0%
!! ATATTAGTGATAAAAAAAGT+AGG + chr7_1:44038936-44038955 None:intergenic 15.0%
!! ATATATTGACACAATATAAA+AGG - chr7_1:44039764-44039783 Msa1020500:five_prime_UTR 15.0%
!! AATAACAACAACATTAGTAA+TGG - chr7_1:44037088-44037107 Msa1020500:CDS 20.0%
!!! AATAATGGATTTTTGTTTAG+TGG - chr7_1:44037127-44037146 Msa1020500:CDS 20.0%
!! GTTAAAATTCATAAAGTTTG+AGG + chr7_1:44037778-44037797 None:intergenic 20.0%
!! AAATACCTATTTGTAAACTA+AGG + chr7_1:44037837-44037856 None:intergenic 20.0%
!!! AGAAAAAGTGTAAAGAAAAA+GGG + chr7_1:44038257-44038276 None:intergenic 20.0%
!!! AAGAAAAAGTGTAAAGAAAA+AGG + chr7_1:44038258-44038277 None:intergenic 20.0%
!!! TATTCTAGAAAATTGATACT+TGG + chr7_1:44038391-44038410 None:intergenic 20.0%
!!! TTTCATTTTCTTTTCTTATC+AGG - chr7_1:44038959-44038978 Msa1020500:CDS 20.0%
!! GAAAATTTGAGAAAACAATT+AGG - chr7_1:44039156-44039175 Msa1020500:CDS 20.0%
!! TGAAATGATGTTAAACAAAA+TGG - chr7_1:44039323-44039342 Msa1020500:CDS 20.0%
!!! ATTTTTCTCAATTTGTATTG+TGG - chr7_1:44039722-44039741 Msa1020500:exon 20.0%
!! AAAATACAAAAGCTATATGA+TGG + chr7_1:44039797-44039816 None:intergenic 20.0%
!!! AATGGTTTGTTTGTCAATTT+TGG + chr7_1:44036507-44036526 None:intergenic 25.0%
!! TTGTTATTGATGTTCTTTAG+AGG + chr7_1:44037058-44037077 None:intergenic 25.0%
!!! TTGTTTTGTTTGCAATTGTT+TGG - chr7_1:44037471-44037490 Msa1020500:intron 25.0%
!! GGACAAATTTTAAATCTTGT+CGG + chr7_1:44037656-44037675 None:intergenic 25.0%
! TATTTGTAAACTAAGGTTCT+GGG + chr7_1:44037830-44037849 None:intergenic 25.0%
! TTTGAATTTGATATGCTTTG+TGG - chr7_1:44037877-44037896 Msa1020500:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr7_1:44038157-44038176 None:intergenic 25.0%
!!! TCTTTACACTTTTTCTTTAG+TGG - chr7_1:44038261-44038280 Msa1020500:intron 25.0%
!! AATCTACAGAAGTCAATTTT+GGG + chr7_1:44038578-44038597 None:intergenic 25.0%
! TCAGGTCTAATATTGTAAAT+TGG - chr7_1:44038661-44038680 Msa1020500:intron 25.0%
! CCAATAATTGTCATTCTTAT+CGG + chr7_1:44038842-44038861 None:intergenic 25.0%
! AAAAAAGTAGGAGATATCAA+AGG + chr7_1:44038924-44038943 None:intergenic 25.0%
! TTAACATCATTTCAGAAAGA+GGG + chr7_1:44039317-44039336 None:intergenic 25.0%
! TTTAACATCATTTCAGAAAG+AGG + chr7_1:44039318-44039337 None:intergenic 25.0%
!!! TGTAGCTTTTAGAAAAATGA+CGG + chr7_1:44039408-44039427 None:intergenic 25.0%
!!! TTTTTCTAAAAGCTACACTT+TGG - chr7_1:44039411-44039430 Msa1020500:CDS 25.0%
! TTGACGAAATTACAGTAATT+TGG + chr7_1:44039445-44039464 None:intergenic 25.0%
! ATTACTGTAATTTCGTCAAA+CGG - chr7_1:44039446-44039465 Msa1020500:CDS 25.0%
! TTAGTGTATATTTGAAAGCA+CGG + chr7_1:44039473-44039492 None:intergenic 25.0%
! TGGTAATAGTAAAGCATAAA+TGG + chr7_1:44039534-44039553 None:intergenic 25.0%
! GACACAATATAAAAGGATAA+TGG - chr7_1:44039771-44039790 Msa1020500:five_prime_UTR 25.0%
AGTGTTAAGGAAGTTCAAAT+AGG + chr7_1:44036478-44036497 None:intergenic 30.0%
TAGTAATGGTCATAATCAAG+AGG - chr7_1:44037102-44037121 Msa1020500:CDS 30.0%
AGTAATGGTCATAATCAAGA+GGG - chr7_1:44037103-44037122 Msa1020500:CDS 30.0%
CATAATCAAGAGGGTAATAA+TGG - chr7_1:44037112-44037131 Msa1020500:CDS 30.0%
CTCATCATGATGAGTATTAT+TGG + chr7_1:44037221-44037240 None:intergenic 30.0%
CAACAACAACAAGATCATTA+TGG - chr7_1:44037247-44037266 Msa1020500:CDS 30.0%
! AGGTACAGAATTTTCAACTT+GGG - chr7_1:44037323-44037342 Msa1020500:intron 30.0%
TTGTTTGCAATTGTTTGGAA+AGG - chr7_1:44037476-44037495 Msa1020500:intron 30.0%
TGTTTGCAATTGTTTGGAAA+GGG - chr7_1:44037477-44037496 Msa1020500:intron 30.0%
! ATTTTAAATCTTGTCGGAGA+CGG + chr7_1:44037650-44037669 None:intergenic 30.0%
TCAAACTCTTACTACTAAAG+TGG - chr7_1:44037698-44037717 Msa1020500:intron 30.0%
TACTACTAAAGTGGACAAAT+CGG - chr7_1:44037707-44037726 Msa1020500:intron 30.0%
CTATTTGTAAACTAAGGTTC+TGG + chr7_1:44037831-44037850 None:intergenic 30.0%
CAGAACCTTAGTTTACAAAT+AGG - chr7_1:44037829-44037848 Msa1020500:intron 30.0%
!! TGCTGTTGTTAATTTGCATT+TGG - chr7_1:44037951-44037970 Msa1020500:intron 30.0%
TCTAGGAAACAGATTATGTA+GGG + chr7_1:44037987-44038006 None:intergenic 30.0%
TATAAAGCTCGAATACTCAT+CGG - chr7_1:44038090-44038109 Msa1020500:intron 30.0%
TCTCAAATTATTAACGGTGT+CGG - chr7_1:44038188-44038207 Msa1020500:intron 30.0%
AAAAAGGGTAAAGAGCTATA+CGG + chr7_1:44038242-44038261 None:intergenic 30.0%
!!! TACACTTTTTCTTTAGTGGA+AGG - chr7_1:44038265-44038284 Msa1020500:intron 30.0%
! ATCTACAGAAGTCAATTTTG+GGG + chr7_1:44038577-44038596 None:intergenic 30.0%
! GAATCTACAGAAGTCAATTT+TGG + chr7_1:44038579-44038598 None:intergenic 30.0%
GGATCGCAATATTTAAACAA+TGG - chr7_1:44038682-44038701 Msa1020500:intron 30.0%
TCGGTAAGAACATAAATCTT+TGG + chr7_1:44038823-44038842 None:intergenic 30.0%
CCGATAAGAATGACAATTAT+TGG - chr7_1:44038839-44038858 Msa1020500:intron 30.0%
! AATAGGTCAATTGTTCCTTT+TGG + chr7_1:44039047-44039066 None:intergenic 30.0%
AAACAATTAGGTATGCTTCA+AGG - chr7_1:44039168-44039187 Msa1020500:CDS 30.0%
AACTTCTGTAATTAGTGATG+TGG + chr7_1:44039279-44039298 None:intergenic 30.0%
ACATCACTAATTACAGAAGT+TGG - chr7_1:44039278-44039297 Msa1020500:CDS 30.0%
CTAATTACAGAAGTTGGATA+TGG - chr7_1:44039284-44039303 Msa1020500:CDS 30.0%
TAAGTGCATGTTTGAATTGA+TGG - chr7_1:44039355-44039374 Msa1020500:CDS 30.0%
TTACTGTAATTTCGTCAAAC+GGG - chr7_1:44039447-44039466 Msa1020500:CDS 30.0%
GTGCTTTCAAATATACACTA+AGG - chr7_1:44039472-44039491 Msa1020500:CDS 30.0%
TCAAATATACACTAAGGAGA+AGG - chr7_1:44039478-44039497 Msa1020500:CDS 30.0%
! AAATGGTTGCAATTTTCTGT+TGG + chr7_1:44039517-44039536 None:intergenic 30.0%
ACAGTATTAGTAGAAAGACT+TGG + chr7_1:44039554-44039573 None:intergenic 30.0%
TATCCATGAGTGTATTACTT+TGG - chr7_1:44039816-44039835 Msa1020500:five_prime_UTR 30.0%
! ATTTTGGACAGACAGTGTTA+AGG + chr7_1:44036491-44036510 None:intergenic 35.0%
AAATCTTGCTCCAACATTTG+TGG + chr7_1:44036545-44036564 None:intergenic 35.0%
TAACCCGAAATTGGAAGAAT+CGG + chr7_1:44036878-44036897 None:intergenic 35.0%
!! TGAAGGTGTTGATCATGATA+TGG - chr7_1:44036994-44037013 Msa1020500:CDS 35.0%
ATGAAAATGAAGCTGCTTCA+TGG - chr7_1:44037020-44037039 Msa1020500:CDS 35.0%
CACAAGAATTGCAATCAACA+AGG + chr7_1:44037174-44037193 None:intergenic 35.0%
! CTTGTTGATTGCAATTCTTG+TGG - chr7_1:44037172-44037191 Msa1020500:CDS 35.0%
TGTTCCTCAAAAAAGCTATG+TGG - chr7_1:44037270-44037289 Msa1020500:CDS 35.0%
GTTCCTCAAAAAAGCTATGT+GGG - chr7_1:44037271-44037290 Msa1020500:CDS 35.0%
! CAGGTACAGAATTTTCAACT+TGG - chr7_1:44037322-44037341 Msa1020500:intron 35.0%
! ACAGAATTTTCAACTTGGGT+TGG - chr7_1:44037327-44037346 Msa1020500:intron 35.0%
ATTGTAACTGAATCCAGCTT+TGG + chr7_1:44037365-44037384 None:intergenic 35.0%
AAAGCTGGATTCAGTTACAA+TGG - chr7_1:44037364-44037383 Msa1020500:intron 35.0%
TGTTTGGAAAGGGTTGAAAT+TGG - chr7_1:44037487-44037506 Msa1020500:intron 35.0%
TTCCTCAATACCAATTCAAG+AGG + chr7_1:44037579-44037598 None:intergenic 35.0%
! TCTTGAATTGGTATTGAGGA+AGG - chr7_1:44037578-44037597 Msa1020500:intron 35.0%
! CTTGAATTGGTATTGAGGAA+GGG - chr7_1:44037579-44037598 Msa1020500:intron 35.0%
! AGTGGACAAATCGGTATTTT+TGG - chr7_1:44037716-44037735 Msa1020500:intron 35.0%
GTCTAGGAAACAGATTATGT+AGG + chr7_1:44037988-44038007 None:intergenic 35.0%
AATGGCAAACAATCTAGTCT+AGG + chr7_1:44038004-44038023 None:intergenic 35.0%
TCTTTAGTGGAAGGAATCTA+AGG - chr7_1:44038274-44038293 Msa1020500:intron 35.0%
! TAGCAAGAAAGCATGATACT+TGG + chr7_1:44038301-44038320 None:intergenic 35.0%
AAGTATCATGCTTTCTTGCT+AGG - chr7_1:44038300-44038319 Msa1020500:intron 35.0%
CTTGAAGCCATTTACTAGTA+CGG - chr7_1:44038413-44038432 Msa1020500:intron 35.0%
TGTTGTTCCGTACTAGTAAA+TGG + chr7_1:44038423-44038442 None:intergenic 35.0%
! ACAAGTACAAGTAGTGTTGA+AGG - chr7_1:44038440-44038459 Msa1020500:intron 35.0%
!! ATTTTGGGGGAATTAGATTC+TGG + chr7_1:44038563-44038582 None:intergenic 35.0%
! TCTACAGAAGTCAATTTTGG+GGG + chr7_1:44038576-44038595 None:intergenic 35.0%
ACTCAGAGTTTACTGATAAG+TGG - chr7_1:44038625-44038644 Msa1020500:intron 35.0%
! TACTACAGTCACTTTGCAAT+AGG - chr7_1:44038720-44038739 Msa1020500:intron 35.0%
CAGTTTCAATTAGTGCTACA+TGG - chr7_1:44038868-44038887 Msa1020500:intron 35.0%
TCAGGTTTCAGTTTCATCAA+TGG - chr7_1:44038977-44038996 Msa1020500:CDS 35.0%
TCAGTTTCATCAATGGATGT+TGG - chr7_1:44038984-44039003 Msa1020500:CDS 35.0%
! GGAACAATTGACCTATTTTC+AGG - chr7_1:44039050-44039069 Msa1020500:CDS 35.0%
GAATAGAAGGACCTGAAAAT+AGG + chr7_1:44039064-44039083 None:intergenic 35.0%
TGGGAAGACATTTGAATAGA+AGG + chr7_1:44039077-44039096 None:intergenic 35.0%
TCTATCCATTGGAGAGAAAT+GGG + chr7_1:44039096-44039115 None:intergenic 35.0%
! TCTTTTTCTCTCTGTACCTT+AGG + chr7_1:44039130-44039149 None:intergenic 35.0%
TGATGTTAAACAAAATGGCC+AGG - chr7_1:44039328-44039347 Msa1020500:CDS 35.0%
GATGTTAAACAAAATGGCCA+GGG - chr7_1:44039329-44039348 Msa1020500:CDS 35.0%
ATAAATATGCCGAATCTGCG+CGG + chr7_1:44036664-44036683 None:intergenic 40.0%
TGTCCCGATTCTTCCAATTT+CGG - chr7_1:44036871-44036890 Msa1020500:three_prime_UTR 40.0%
AACCCGAAATTGGAAGAATC+GGG + chr7_1:44036877-44036896 None:intergenic 40.0%
!! CCAATTTCGGGTTACCTATA+CGG - chr7_1:44036884-44036903 Msa1020500:three_prime_UTR 40.0%
TTCATCTTCGGCACCTAAAA+GGG + chr7_1:44036921-44036940 None:intergenic 40.0%
!! TGGAGAAGTTGATGAGTACT+TGG - chr7_1:44037147-44037166 Msa1020500:CDS 40.0%
GTTGATTGCAATTCTTGTGG+TGG - chr7_1:44037175-44037194 Msa1020500:CDS 40.0%
!!! TCACCCACATAGCTTTTTTG+AGG + chr7_1:44037277-44037296 None:intergenic 40.0%
TTGGAAAGGGTTGAAATTGG+TGG - chr7_1:44037490-44037509 Msa1020500:intron 40.0%
AGAGGCTCAAGATCTTGAAT+TGG + chr7_1:44037561-44037580 None:intergenic 40.0%
AGATCTTGAGCCTCTTGAAT+TGG - chr7_1:44037566-44037585 Msa1020500:intron 40.0%
AGCCTCTTGAATTGGTATTG+AGG - chr7_1:44037574-44037593 Msa1020500:intron 40.0%
AACCACAATTCGCGTAATTG+CGG - chr7_1:44037743-44037762 Msa1020500:intron 40.0%
CATGCTTTCTTGCTAGGAAA+CGG - chr7_1:44038306-44038325 Msa1020500:intron 40.0%
! GAATAGGTCATGGTTGATTC+TGG + chr7_1:44039017-44039036 None:intergenic 40.0%
ACCTATTCAAGACCTCCAAA+AGG - chr7_1:44039029-44039048 Msa1020500:CDS 40.0%
!! TCCTTTTGGAGGTCTTGAAT+AGG + chr7_1:44039033-44039052 None:intergenic 40.0%
! AGGTCAATTGTTCCTTTTGG+AGG + chr7_1:44039044-44039063 None:intergenic 40.0%
CTCTATCCATTGGAGAGAAA+TGG + chr7_1:44039097-44039116 None:intergenic 40.0%
! ACTTTGGCTTCTCTATCCAT+TGG + chr7_1:44039107-44039126 None:intergenic 40.0%
ATAGAGAAGCCAAAGTCCTA+AGG - chr7_1:44039111-44039130 Msa1020500:CDS 40.0%
TGCTCCAACATTTGTGGAGA+GGG + chr7_1:44036539-44036558 None:intergenic 45.0%
TTGCTCCAACATTTGTGGAG+AGG + chr7_1:44036540-44036559 None:intergenic 45.0%
TTTACAAAGAAAAGCCGCCG+GGG + chr7_1:44036774-44036793 None:intergenic 45.0%
CTTTACAAAGAAAAGCCGCC+GGG + chr7_1:44036775-44036794 None:intergenic 45.0%
GCTTTACAAAGAAAAGCCGC+CGG + chr7_1:44036776-44036795 None:intergenic 45.0%
GTGGATATCAGCATCACAAG+TGG + chr7_1:44036819-44036838 None:intergenic 45.0%
GTCCCGATTCTTCCAATTTC+GGG - chr7_1:44036872-44036891 Msa1020500:three_prime_UTR 45.0%
CCGTATAGGTAACCCGAAAT+TGG + chr7_1:44036887-44036906 None:intergenic 45.0%
CTTCATCTTCGGCACCTAAA+AGG + chr7_1:44036922-44036941 None:intergenic 45.0%
!!! CTTTTAGGTGCCGAAGATGA+AGG - chr7_1:44036920-44036939 Msa1020500:three_prime_UTR 45.0%
TGTTCCTGTTCAACAACAGC+AGG - chr7_1:44037303-44037322 Msa1020500:intron 45.0%
TGTACCTGCTGTTGTTGAAC+AGG + chr7_1:44037310-44037329 None:intergenic 45.0%
GAGTTTGAGTCTTCCAAAGC+TGG - chr7_1:44037349-44037368 Msa1020500:intron 45.0%
GCTGGATTCAGTTACAATGG+TGG - chr7_1:44037367-44037386 Msa1020500:intron 45.0%
ACAACAGCATGTCAGTCATG+TGG + chr7_1:44037940-44037959 None:intergenic 45.0%
GCTCGAATACTCATCGGATT+AGG - chr7_1:44038096-44038115 Msa1020500:intron 45.0%
GGTAAAGAGCTATACGGACA+CGG + chr7_1:44038236-44038255 None:intergenic 45.0%
TTGGGGGAATTAGATTCTGG+AGG + chr7_1:44038560-44038579 None:intergenic 45.0%
AGTGGACAAGTCACTTGTTC+AGG - chr7_1:44038643-44038662 Msa1020500:intron 45.0%
TGGAGGTCTTGAATAGGTCA+TGG + chr7_1:44039027-44039046 None:intergenic 45.0%
GTCTTCCCATTTCTCTCCAA+TGG - chr7_1:44039088-44039107 Msa1020500:CDS 45.0%
CTCTCTGTACCTTAGGACTT+TGG + chr7_1:44039123-44039142 None:intergenic 45.0%
GGAAAGCCTATGCTGAAACT+CGG - chr7_1:44039189-44039208 Msa1020500:CDS 45.0%
! GCGAATCGACCTTTTATACG+CGG + chr7_1:44039215-44039234 None:intergenic 45.0%
CAAACATGCACTTAGTTCCC+TGG + chr7_1:44039349-44039368 None:intergenic 45.0%
AGAAAAATGACGGTGACACG+AGG + chr7_1:44039398-44039417 None:intergenic 45.0%
!! ATTATAAATTATAATCTAAA+AGG + chr7_1:44037677-44037696 None:intergenic 5.0%
!! AAAAAATTTATTATGTATAT+TGG + chr7_1:44038350-44038369 None:intergenic 5.0%
CTCCAACATTTGTGGAGAGG+GGG + chr7_1:44036537-44036556 None:intergenic 50.0%
GCTCCAACATTTGTGGAGAG+GGG + chr7_1:44036538-44036557 None:intergenic 50.0%
CACAGCCACTATAAGGTCTG+CGG - chr7_1:44036583-44036602 Msa1020500:three_prime_UTR 50.0%
TATAAGGTCTGCGGCAACGT+GGG - chr7_1:44036592-44036611 Msa1020500:three_prime_UTR 50.0%
! TTGCAAGAGGGTTAGCAGAG+TGG + chr7_1:44036838-44036857 None:intergenic 50.0%
GAAGAATCGGGACACGTTGA+TGG + chr7_1:44036865-44036884 None:intergenic 50.0%
ATCTTCGGCACCTAAAAGGG+TGG + chr7_1:44036918-44036937 None:intergenic 50.0%
! GCCGAAGATGAAGGCTTTGT+CGG - chr7_1:44036929-44036948 Msa1020500:three_prime_UTR 50.0%
GCCGACAAAGCCTTCATCTT+CGG + chr7_1:44036933-44036952 None:intergenic 50.0%
! GAAGATGAAGGCTTTGTCGG+CGG - chr7_1:44036932-44036951 Msa1020500:three_prime_UTR 50.0%
CTCCGCAATTACGCGAATTG+TGG + chr7_1:44037748-44037767 None:intergenic 50.0%
CAGCATGTCAGTCATGTGGA+AGG + chr7_1:44037936-44037955 None:intergenic 50.0%
! TCATCGGATTAGGCGTGTCT+CGG - chr7_1:44038106-44038125 Msa1020500:intron 50.0%
!! TATTAACGGTGTCGGCGTGT+CGG - chr7_1:44038196-44038215 Msa1020500:intron 50.0%
! GGGGAATTAGATTCTGGAGG+TGG + chr7_1:44038557-44038576 None:intergenic 50.0%
GAAACTCGGCCGCGTATAAA+AGG - chr7_1:44039203-44039222 Msa1020500:CDS 50.0%
TGGAGAGGGGGAGTGATGAA+TGG + chr7_1:44036525-44036544 None:intergenic 55.0%
CTCCCCCTCTCCACAAATGT+TGG - chr7_1:44036532-44036551 Msa1020500:three_prime_UTR 55.0%
TATAGTGGCTGTGGCTGAGG+TGG + chr7_1:44036576-44036595 None:intergenic 55.0%
CCTTATAGTGGCTGTGGCTG+AGG + chr7_1:44036579-44036598 None:intergenic 55.0%
CCTCAGCCACAGCCACTATA+AGG - chr7_1:44036576-44036595 Msa1020500:three_prime_UTR 55.0%
CGCAGACCTTATAGTGGCTG+TGG + chr7_1:44036585-44036604 None:intergenic 55.0%
CGTTGCCGCAGACCTTATAG+TGG + chr7_1:44036591-44036610 None:intergenic 55.0%
CTATAAGGTCTGCGGCAACG+TGG - chr7_1:44036591-44036610 Msa1020500:three_prime_UTR 55.0%
! GGTTTTCTGCCGCGCAGATT+CGG - chr7_1:44036652-44036671 Msa1020500:three_prime_UTR 55.0%
!! GTTGATGGCGGCTTGCAAGA+GGG + chr7_1:44036850-44036869 None:intergenic 55.0%
! GAATCGGGACACGTTGATGG+CGG + chr7_1:44036862-44036881 None:intergenic 55.0%
GGGTTACCTATACGGTCCTC+CGG - chr7_1:44036892-44036911 Msa1020500:three_prime_UTR 55.0%
!! TGGTTGTGGTGGTGGTTGTG+AGG - chr7_1:44036955-44036974 Msa1020500:exon 55.0%
!! TTGTGGTGGTGGTTGTGAGG+TGG - chr7_1:44036958-44036977 Msa1020500:CDS 55.0%
TGGTTGTGAGGTGGAGGAAG+AGG - chr7_1:44036967-44036986 Msa1020500:CDS 55.0%
TTGTGAGGTGGAGGAAGAGG+AGG - chr7_1:44036970-44036989 Msa1020500:CDS 55.0%
GTGGAGGAAGAGGAGGATGA+AGG - chr7_1:44036977-44036996 Msa1020500:CDS 55.0%
! GATTAGGCGTGTCTCGGTGT+CGG - chr7_1:44038112-44038131 Msa1020500:intron 55.0%
ATACGGACACGGACACGACT+CGG + chr7_1:44038225-44038244 None:intergenic 55.0%
! AGCATGTGACACGTGCCGCT+CGG - chr7_1:44036619-44036638 Msa1020500:three_prime_UTR 60.0%
GTGGATGCGTGCATCACACG+CGG + chr7_1:44036690-44036709 None:intergenic 60.0%
GTGTGATGCACGCATCCACG+CGG - chr7_1:44036691-44036710 Msa1020500:three_prime_UTR 60.0%
GTTCGTGCCTCGAGGCTACA+CGG + chr7_1:44036721-44036740 None:intergenic 60.0%
!! CGTTGATGGCGGCTTGCAAG+AGG + chr7_1:44036851-44036870 None:intergenic 60.0%
TCGGCACCTAAAAGGGTGGC+CGG + chr7_1:44036914-44036933 None:intergenic 60.0%
! GATGAAGGCTTTGTCGGCGG+TGG - chr7_1:44036935-44036954 Msa1020500:three_prime_UTR 60.0%
TTTGTCGGCGGTGGTTGTGG+TGG - chr7_1:44036944-44036963 Msa1020500:exon 60.0%
!! TGGTGGTGGTTGTGAGGTGG+AGG - chr7_1:44036961-44036980 Msa1020500:CDS 60.0%
ACGCGGCCGAGTTTCAGCAT+AGG + chr7_1:44039198-44039217 None:intergenic 60.0%
! CTGTGGCTGAGGTGGTGGTG+AGG + chr7_1:44036568-44036587 None:intergenic 65.0%
AGTGGCTGTGGCTGAGGTGG+TGG + chr7_1:44036573-44036592 None:intergenic 65.0%
GCGGCAGAAAACCGCGCATG+GGG + chr7_1:44036645-44036664 None:intergenic 65.0%
CGCGGCAGAAAACCGCGCAT+GGG + chr7_1:44036646-44036665 None:intergenic 65.0%
AGGCTACACGGTTTGCCGCG+TGG + chr7_1:44036709-44036728 None:intergenic 65.0%
CGGCAAACCGTGTAGCCTCG+AGG - chr7_1:44036711-44036730 Msa1020500:three_prime_UTR 65.0%
CTCGAGGCACGAACGCGTCT+GGG - chr7_1:44036727-44036746 Msa1020500:three_prime_UTR 65.0%
CGAACGCGTCTGGGTCTGTG+AGG - chr7_1:44036736-44036755 Msa1020500:three_prime_UTR 65.0%
! GGTCCTCCGGCCACCCTTTT+AGG - chr7_1:44036905-44036924 Msa1020500:three_prime_UTR 65.0%
GCACCTAAAAGGGTGGCCGG+AGG + chr7_1:44036911-44036930 None:intergenic 65.0%
! GGCTTTGTCGGCGGTGGTTG+TGG - chr7_1:44036941-44036960 Msa1020500:exon 65.0%
AAACCGCGCATGGGGCCGAG+CGG + chr7_1:44036637-44036656 None:intergenic 70.0%
GCGCGGCAGAAAACCGCGCA+TGG + chr7_1:44036647-44036666 None:intergenic 70.0%
CCAGACGCGTTCGTGCCTCG+AGG + chr7_1:44036729-44036748 None:intergenic 70.0%
CCTCGAGGCACGAACGCGTC+TGG - chr7_1:44036726-44036745 Msa1020500:three_prime_UTR 70.0%
GGGTGGCCGGAGGACCGTAT+AGG + chr7_1:44036901-44036920 None:intergenic 70.0%
GTCGGCGGTGGTTGTGGTGG+TGG - chr7_1:44036947-44036966 Msa1020500:exon 70.0%
TGAGGCCTGCGAGCGTGCCC+CGG - chr7_1:44036754-44036773 Msa1020500:three_prime_UTR 75.0%
!! GTGCCGCTCGGCCCCATGCG+CGG - chr7_1:44036631-44036650 Msa1020500:three_prime_UTR 80.0%
! GGCCTGCGAGCGTGCCCCGG+CGG - chr7_1:44036757-44036776 Msa1020500:three_prime_UTR 85.0%
! AGCCGCCGGGGCACGCTCGC+AGG + chr7_1:44036762-44036781 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 44036442 44039839 44036442 ID=Msa1020500;Name=Msa1020500
chr7_1 mRNA 44036442 44039839 44036442 ID=Msa1020500-mRNA-1;Parent=Msa1020500;Name=Msa1020500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=106|1|1|1|1|1|2|514|400
chr7_1 exon 44036442 44037300 44036442 ID=Msa1020500-mRNA-1:exon:8521;Parent=Msa1020500-mRNA-1
chr7_1 exon 44038876 44039839 44038876 ID=Msa1020500-mRNA-1:exon:8520;Parent=Msa1020500-mRNA-1
chr7_1 five_prime_UTR 44039734 44039839 44039734 ID=Msa1020500-mRNA-1:five_prime_utr;Parent=Msa1020500-mRNA-1
chr7_1 CDS 44038876 44039733 44038876 ID=Msa1020500-mRNA-1:cds;Parent=Msa1020500-mRNA-1
chr7_1 CDS 44036956 44037300 44036956 ID=Msa1020500-mRNA-1:cds;Parent=Msa1020500-mRNA-1
chr7_1 three_prime_UTR 44036442 44036955 44036442 ID=Msa1020500-mRNA-1:three_prime_utr;Parent=Msa1020500-mRNA-1
Gene Sequence

>Msa1020500

ATGTTGGAGCAAGATTTCCTCACCACCACCTCAGCCACAGCCACTATAAGGTCTGCGGCAACGTGGGCACGAGCATGTGACACGTGCCGCTCGGCCCCATGCGCGGTTTTCTGCCGCGCAGATTCGGCATATTTATGTGCCGCGTGTGATGCACGCATCCACGCGGCAAACCGTGTAGCCTCGAGGCACGAACGCGTCTGGGTCTGTGAGGCCTGCGAGCGTGCCCCGGCGGCTTTTCTTTGTAAAGCTGATGCTGCTTCTCTTTGCTCCACTTGTGATGCTGATATCCACTCTGCTAACCCTCTTGCAAGCCGCCATCAACGTGTCCCGATTCTTCCAATTTCGGGTTACCTATACGGTCCTCCGGCCACCCTTTTAGGTGCCGAAGATGAAGGCTTTGTCGGCGGTGGTTGTGGTGGTGGTTGTGAGGTGGAGGAAGAGGAGGATGAAGGTGTTGATCATGATATGGAAGATGAAAATGAAGCTGCTTCATGGCTTTTGTTGAATCCTCTAAAGAACATCAATAACAATAGTAACAACAATAACAACAACATTAGTAATGGTCATAATCAAGAGGGTAATAATGGATTTTTGTTTAGTGGAGAAGTTGATGAGTACTTGGACCTTGTTGATTGCAATTCTTGTGGTGGTGATGAAAACACTTTCAATACCAATAATACTCATCATGATGAGTATAGTCAACAACAACAAGATCATTATGGTGTTCCTCAAAAAAGCTATGTGGGTGATAGTGTTGTTCCTGTTCAACAACAGCAGGTACAGAATTTTCAACTTGGGTTGGAGTTTGAGTCTTCCAAAGCTGGATTCAGTTACAATGGTGGTTCTATTAGTCAAAGTGTTTCAGTTTCATCAATGGATGTTGGTGTTGTACCAGAATCAACCATGACCTATTCAAGACCTCCAAAAGGAACAATTGACCTATTTTCAGGTCCTTCTATTCAAATGTCTTCCCATTTCTCTCCAATGGATAGAGAAGCCAAAGTCCTAAGGTACAGAGAGAAAAAGAAGACAAGAAAATTTGAGAAAACAATTAGGTATGCTTCAAGGAAAGCCTATGCTGAAACTCGGCCGCGTATAAAAGGTCGATTCGCGAAGAGAACAGATGTAGAAGCTGAAGTTGATCAAATGTTTTCCACATCACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGA
Protein sequence

>Msa1020500

MLEQDFLTTTSATATIRSAATWARACDTCRSAPCAVFCRADSAYLCAACDARIHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSTCDADIHSANPLASRHQRVPILPISGYLYGPPATLLGAEDEGFVGGGCGGGCEVEEEEDEGVDHDMEDENEAASWLLLNPLKNINNNSNNNNNNISNGHNQEGNNGFLFSGEVDEYLDLVDCNSCGGDENTFNTNNTHHDEYSQQQQDHYGVPQKSYVGDSVVPVQQQQVQNFQLGLEFESSKAGFSYNGGSISQSVSVSSMDVGVVPESTMTYSRPPKGTIDLFSGPSIQMSSHFSPMDREAKVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTSLITEVGYGIVPSF*