AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0030710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030710 MtrunA17_Chr1g0188221 91.365 359 14 1 75 416 1 359 0.0 649
Msa0030710 MtrunA17_Chr1g0188221 65.940 367 33 3 442 716 1 367 3.32e-152 448
Msa0030710 MtrunA17_Chr1g0188231 80.541 370 50 3 75 424 1 368 0.0 562
Msa0030710 MtrunA17_Chr1g0188231 69.459 370 16 4 442 716 1 368 6.23e-165 481
Msa0030710 MtrunA17_Chr6g0476321 70.052 384 91 4 50 416 22 398 0.0 535
Msa0030710 MtrunA17_Chr6g0476321 54.545 385 76 5 424 716 29 406 8.02e-127 384
Msa0030710 MtrunA17_Chr3g0117581 34.853 373 182 10 85 410 519 877 3.98e-47 180
Msa0030710 MtrunA17_Chr3g0117581 27.949 390 146 12 446 713 513 889 9.22e-30 126
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030710 AT2G17340.1 70.225 356 88 2 78 416 3 357 2.80e-172 500
Msa0030710 AT2G17340.1 52.198 364 81 4 445 716 3 365 2.75e-113 348
Msa0030710 AT4G35360.2 69.944 356 89 2 78 416 3 357 4.72e-172 499
Msa0030710 AT4G35360.2 52.459 366 81 4 445 718 3 367 2.77e-115 353
Msa0030710 AT4G35360.1 69.944 356 89 2 78 416 3 357 4.72e-172 499
Msa0030710 AT4G35360.1 52.459 366 81 4 445 718 3 367 2.77e-115 353
Msa0030710 AT2G17320.1 67.045 352 98 2 82 416 1 351 5.62e-161 471
Msa0030710 AT2G17320.1 51.389 360 82 4 449 716 1 359 7.52e-109 337
Msa0030710 AT2G17320.2 67.656 337 91 2 82 401 1 336 1.11e-154 454
Msa0030710 AT2G17320.2 51.632 337 70 4 449 693 1 336 5.96e-99 310
Msa0030710 AT4G35360.3 73.200 250 50 1 182 414 9 258 5.25e-122 367
Msa0030710 AT4G35360.3 55.187 241 39 2 545 716 28 268 1.21e-74 243
Msa0030710 AT4G32180.1 33.531 337 175 7 121 410 550 884 7.23e-43 168
Msa0030710 AT4G32180.1 26.598 391 153 12 446 714 519 897 6.24e-27 118
Msa0030710 AT4G32180.2 32.035 231 130 5 121 326 550 778 2.33e-28 122
Msa0030710 AT4G32180.2 27.306 271 112 8 447 644 520 778 1.27e-17 88.2
Msa0030710 AT4G32180.3 32.035 231 130 5 121 326 550 778 2.33e-28 122
Msa0030710 AT4G32180.3 27.306 271 112 8 447 644 520 778 1.27e-17 88.2

Find 143 sgRNAs with CRISPR-Local

Find 1124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTGAATGCAGGTTATTT+TGG 0.230447 1_1:+57122125 Msa0030710:intron
TGATATAAATGAAATGAAAT+TGG 0.235276 1_1:-57105361 None:intergenic
AGACTTGTAGCTATATGTTT+TGG 0.247458 1_1:+57124029 Msa0030710:exon
GACAAACAACATTCTCAAAT+AGG 0.282309 1_1:-57107366 None:intergenic
GACGAACAACTTTCTCAAAT+AGG 0.290027 1_1:-57121301 None:intergenic
TGAACCTATGAACTAATCTT+AGG 0.310053 1_1:-57105399 None:intergenic
GCTCCTTCGGCGTGGGAGTC+AGG 0.315802 1_1:+57108103 Msa0030710:CDS
GCTTTGAGTGCAGGTTGTTT+TGG 0.323869 1_1:+57108554 Msa0030710:intron
CGACTTGAGAATTTAGTTAG+AGG 0.325458 1_1:+57107418 Msa0030710:CDS
CGACTTGAGAATTTAGTTAG+AGG 0.325458 1_1:+57121353 Msa0030710:CDS
TCAGTGGGAGTGGGGACTTT+TGG 0.330545 1_1:-57119029 None:intergenic
GCTCCTTCGGCGTGGGAGTC+AGG 0.334226 1_1:+57121997 Msa0030710:CDS
AATGGTGCATGCTGAGTATT+TGG 0.337934 1_1:-57106325 None:intergenic
TAAAGAACACGCCAATTATC+AGG 0.353591 1_1:-57123998 None:intergenic
AATGGTGCATGCTGAATAAT+TGG 0.362740 1_1:-57118982 None:intergenic
CCACTCCCACTGAGTTATCT+TGG 0.363080 1_1:+57119039 Msa0030710:CDS
TATAAGGGATACCTAGTGTT+TGG 0.363679 1_1:-57112472 None:intergenic
CATTTGCAAGGGAGCTCCTT+CGG 0.363751 1_1:+57108090 Msa0030710:CDS
CATTTGCAAGGGAGCTCCTT+CGG 0.363751 1_1:+57121984 Msa0030710:CDS
TCACTTCCACCGAGTTATCT+TGG 0.364211 1_1:+57106382 Msa0030710:CDS
TGAGGAAGTTCTTAAAGAAC+TGG 0.366642 1_1:+57106990 Msa0030710:CDS
TAACCTTTGAGCATAAATTT+CGG 0.374052 1_1:-57119250 None:intergenic
GCGGGGAACGTATTTGATCT+TGG 0.374523 1_1:+57121383 Msa0030710:CDS
ACGAACAACTTTCTCAAATA+GGG 0.385184 1_1:-57121300 None:intergenic
TCAGCTTTATTTGCAGCATC+AGG 0.385927 1_1:-57106565 None:intergenic
ACAAACAACATTCTCAAATA+GGG 0.391188 1_1:-57107365 None:intergenic
TCGGCTTTATTTGCAGCATC+AGG 0.396559 1_1:-57119231 None:intergenic
TCAGTATCATCCATCAATAA+AGG 0.402411 1_1:-57106297 None:intergenic
GTTGGTGATAATATAATAAA+CGG 0.403901 1_1:-57105442 None:intergenic
AGAGGATTTCCATGACTTGC+AGG 0.410355 1_1:-57119451 None:intergenic
GGTGAGATTCCCTTTGTTGA+TGG 0.411077 1_1:+57118944 Msa0030710:CDS
GCAGGGAACGTATTTGATCT+TGG 0.416285 1_1:+57107448 Msa0030710:CDS
AGAGGATCGCCATGACTTGC+AGG 0.416925 1_1:-57106813 None:intergenic
ATTGATGAATACAACGTTGT+TGG 0.436524 1_1:-57105582 None:intergenic
ATAAGGGATACCTAGTGTTT+GGG 0.441987 1_1:-57112471 None:intergenic
AATCTATTAATTACTAACTC+TGG 0.443425 1_1:+57122329 Msa0030710:CDS
TTAAGGGATACCTAGTGGTT+GGG 0.447540 1_1:-57105626 None:intergenic
ATCATATTTGTTGATAACTC+TGG 0.448564 1_1:+57121935 Msa0030710:CDS
GGATGAAGAAGGACGTCTCT+TGG 0.448800 1_1:+57108721 Msa0030710:CDS
GGATGAAGAAGGACGTCTCT+TGG 0.448800 1_1:+57122292 Msa0030710:CDS
CGAAGGAGCTCCCTTGCAAA+TGG 0.452323 1_1:-57108089 None:intergenic
CGAAGGAGCTCCCTTGCAAA+TGG 0.452323 1_1:-57121983 None:intergenic
ATTGATGAATGCAATGTTGT+TGG 0.456811 1_1:-57112427 None:intergenic
GGTGAGATTTCCTTTATTGA+TGG 0.457589 1_1:+57106287 Msa0030710:CDS
CTCACAGGTGCTGGAGCCAT+TGG 0.457791 1_1:+57105470 Msa0030710:CDS
TTACTCTTTCAACAACCTGC+AGG 0.458433 1_1:+57105545 Msa0030710:CDS
ATTCAGCATGCACCATTCCT+TGG 0.469602 1_1:+57118988 Msa0030710:CDS
TAAGTCACATCATTGATAGA+AGG 0.471591 1_1:-57122162 None:intergenic
CCAAGATAACTCAGTGGGAG+TGG 0.475021 1_1:-57119039 None:intergenic
CAACACAAACTCACAGGTGC+TGG 0.479885 1_1:+57105461 Msa0030710:CDS
TAAGTCACATCATTGATAGA+AGG 0.480649 1_1:-57108591 None:intergenic
GATGAAGAAGGACGTCTCTT+GGG 0.482977 1_1:+57108722 Msa0030710:CDS
GATGAAGAAGGACGTCTCTT+GGG 0.482977 1_1:+57122293 Msa0030710:CDS
CAAGATCTACATCACTGGTA+AGG 0.485155 1_1:-57108947 None:intergenic
ACTCAGCATGCACCATTCCT+TGG 0.486421 1_1:+57106331 Msa0030710:CDS
TTTAAGGGATACCTAGTGGT+TGG 0.487889 1_1:-57105627 None:intergenic
CAAGGGAGCTCCTTCGGCGT+GGG 0.491227 1_1:+57108096 Msa0030710:CDS
CAAGGGAGCTCCTTCGGCGT+GGG 0.491227 1_1:+57121990 Msa0030710:CDS
AATGATGCAATTAAAGATGA+AGG 0.491822 1_1:+57121326 Msa0030710:CDS
AGGTAAATCATTTCCAGAGT+TGG 0.492461 1_1:-57108771 None:intergenic
GTTAATTGAAATTGTATCAA+AGG 0.499357 1_1:+57122191 Msa0030710:CDS
AATGATGCTATTGAAGATGA+AGG 0.504453 1_1:+57107391 Msa0030710:CDS
TCAAGAAATTCTGCAACCTC+AGG 0.517783 1_1:-57109656 None:intergenic
CAGCATGCACCATTCCTTGG+AGG 0.518535 1_1:+57118991 Msa0030710:CDS
TTGATGAATGCAATGTTGTT+GGG 0.521865 1_1:-57112426 None:intergenic
CAGCATGCACCATTCCTTGG+AGG 0.526434 1_1:+57106334 Msa0030710:CDS
TAGTGTTTGGGAATGATGAT+TGG 0.531634 1_1:-57112459 None:intergenic
AAGAAAGATCCTGCAAGTCA+TGG 0.531799 1_1:+57119442 Msa0030710:CDS
TTGCAGAATTTCTTGAGTCA+CGG 0.536535 1_1:+57109663 Msa0030710:CDS
CAGTATCATCCATCAACAAA+GGG 0.542245 1_1:-57118953 None:intergenic
TGAGAGAACATACTTGTAGG+AGG 0.544156 1_1:-57119087 None:intergenic
AAGCCGAAATTTATGCTCAA+AGG 0.544878 1_1:+57119247 Msa0030710:CDS
TATATCAGAAGAAGAAGTAA+TGG 0.546147 1_1:+57106245 Msa0030710:intron
GTGAGATCATACTTGTAGGA+GGG 0.547151 1_1:-57106429 None:intergenic
CAGCACCTGTGAGTTTGTGT+TGG 0.550378 1_1:-57105460 None:intergenic
GCAGAAGCTTTCTCTAGGGA+TGG 0.550760 1_1:+57107806 Msa0030710:CDS
TCATCAGAAGGGAGCCTCCA+AGG 0.552177 1_1:-57119005 None:intergenic
CAAGATAACTCAGTGGGAGT+GGG 0.552274 1_1:-57119038 None:intergenic
GCTAATTGAAATTATATCAA+AGG 0.552577 1_1:+57108620 Msa0030710:CDS
AGCTTGCAGAAGCTTTCTCT+AGG 0.552796 1_1:+57107801 Msa0030710:intron
GAGAGAACATACTTGTAGGA+GGG 0.554100 1_1:-57119086 None:intergenic
ATTTGATCTTGGTTCTCCCC+AGG 0.554481 1_1:+57107459 Msa0030710:CDS
ATTTGATCTTGGTTCTCCCC+AGG 0.554481 1_1:+57121394 Msa0030710:CDS
TGAGATCATACTTGTAGGAG+GGG 0.554989 1_1:-57106428 None:intergenic
GCAAGGGAGCTCCTTCGGCG+TGG 0.555601 1_1:+57108095 Msa0030710:CDS
GCAAGGGAGCTCCTTCGGCG+TGG 0.555601 1_1:+57121989 Msa0030710:CDS
AAAATCTTCTCCCTCGACCA+TGG 0.556892 1_1:+57107852 Msa0030710:CDS
TTCCAGTTAAAGGATGAAGA+AGG 0.557052 1_1:+57122281 Msa0030710:intron
TCATCGATAATCCATGGTCG+AGG 0.558003 1_1:-57107863 None:intergenic
GGCAATTAGTACACCACAGT+TGG 0.563237 1_1:+57118923 Msa0030710:CDS
GGCAAGTAGTAGATCACAGT+TGG 0.563650 1_1:+57106266 Msa0030710:CDS
AACTTTCTCAAATAGGGAGA+TGG 0.564795 1_1:-57121294 None:intergenic
AGAGAACATACTTGTAGGAG+GGG 0.566453 1_1:-57119085 None:intergenic
TACTCTTTCAACAACCTGCA+GGG 0.566925 1_1:+57105546 Msa0030710:CDS
AAGATCTACATCACTGGTAA+GGG 0.573418 1_1:-57108946 None:intergenic
TGTGAGATCATACTTGTAGG+AGG 0.573650 1_1:-57106430 None:intergenic
AATGACAAGATCTACATCAC+TGG 0.576486 1_1:-57108952 None:intergenic
AAGAAAGATCCTGCAAGTCA+TGG 0.579855 1_1:+57106804 Msa0030710:CDS
AGAAGGGAGCCTCCAAGGAA+TGG 0.580030 1_1:-57119000 None:intergenic
AAACCTGACTCCCACGCCGA+AGG 0.580767 1_1:-57108106 None:intergenic
TTTATCAGAAGAAGAAGCAA+TGG 0.580992 1_1:+57118902 Msa0030710:intron
AGAAGGGAACCTCCAAGGAA+TGG 0.582699 1_1:-57106343 None:intergenic
CATTTATTATGACAGGGTCG+TGG 0.582862 1_1:+57123601 Msa0030710:intron
ATACCTGACTCCCACGCCGA+AGG 0.585504 1_1:-57122000 None:intergenic
TTGCAAAATTTCTTAAATCG+CGG 0.585894 1_1:+57123804 Msa0030710:CDS
GAACAGAGAGTTAACCCTGC+AGG 0.586729 1_1:-57105560 None:intergenic
AGGAGGGGATACCACTGTCT+AGG 0.589365 1_1:-57106413 None:intergenic
ATGAAGGAATACAATTCCAA+TGG 0.589602 1_1:-57105486 None:intergenic
TCAGTATCATCCATCAACAA+AGG 0.590403 1_1:-57118954 None:intergenic
TAGTGGTTGGGAATGATGAT+TGG 0.590710 1_1:-57105614 None:intergenic
ACTCAAGATTGAGATCAGTA+AGG 0.591470 1_1:-57123915 None:intergenic
GCAGGTTATTGATCTTACAA+AGG 0.592904 1_1:+57108905 Msa0030710:intron
GCTTGCAGAAGCTTTCTCTA+GGG 0.594621 1_1:+57107802 Msa0030710:intron
GAGGAAGTTCTTAAAGAACT+GGG 0.598212 1_1:+57106991 Msa0030710:CDS
AATCATCATTCCCAACCACT+AGG 0.598849 1_1:+57105616 Msa0030710:CDS
AAGATAACTCAGTGGGAGTG+GGG 0.600655 1_1:-57119037 None:intergenic
TCAAGGTCATCGATAATCCA+TGG 0.602984 1_1:-57107869 None:intergenic
TGCCAGTTAAAGGATGAAGA+AGG 0.608692 1_1:+57108710 Msa0030710:intron
ACTGCACGTGGATCATCAGA+AGG 0.610840 1_1:-57106360 None:intergenic
TCATCAGAAGGGAACCTCCA+AGG 0.615232 1_1:-57106348 None:intergenic
AGAGCAAAATCGCAAATCGT+AGG 0.615773 1_1:-57123891 None:intergenic
GAACATACAAGGATATCAAG+AGG 0.620851 1_1:-57106831 None:intergenic
GAACATACAAGGATATCAAG+AGG 0.620851 1_1:-57119469 None:intergenic
AATCATCATTCCCAAACACT+AGG 0.622439 1_1:+57112461 Msa0030710:CDS
TATCACCAACACAAACTCAC+AGG 0.623544 1_1:+57105455 Msa0030710:CDS
TCGGTGGAAGTGACTGCACG+TGG 0.626192 1_1:-57106372 None:intergenic
TTAATCCAAGATAACTCAGT+GGG 0.634666 1_1:-57119044 None:intergenic
ATTAATCCAAGATAACTCAG+TGG 0.635903 1_1:-57119045 None:intergenic
CATCGATAATCCATGGTCGA+GGG 0.636580 1_1:-57107862 None:intergenic
GAGATTTATCCAAGATAACT+CGG 0.639617 1_1:-57106391 None:intergenic
AGATATCTTCAAGAAAGTCA+AGG 0.640034 1_1:+57107020 Msa0030710:CDS
GCTTCTATGTAGACTTCGTG+AGG 0.640274 1_1:+57106972 Msa0030710:intron
CTTACAGGTGAAACATCCTG+AGG 0.644122 1_1:+57109640 Msa0030710:intron
AAAGGGAATCTCACCAACTG+TGG 0.651094 1_1:-57118936 None:intergenic
ACAGAATGAAGAGAATGCAA+AGG 0.651422 1_1:+57121271 Msa0030710:intron
ACAGGCTGAAGAGAATGCAA+AGG 0.653718 1_1:+57107336 Msa0030710:intron
CATCTCTTATGACAGGGGCG+CGG 0.667603 1_1:+57109472 Msa0030710:intron
TGGATAAATCTCCTAGACAG+TGG 0.682304 1_1:+57106402 Msa0030710:CDS
AGGAAGTTCTTAAAGAACTG+GGG 0.687598 1_1:+57106992 Msa0030710:CDS
TGATTCTATGAAGATTGCAA+TGG 0.691158 1_1:+57109528 Msa0030710:CDS
TGATTCTATGAAGATTGCAA+TGG 0.691158 1_1:+57123657 Msa0030710:CDS
CTGCACGTGGATCATCAGAA+GGG 0.693458 1_1:-57106359 None:intergenic
ATTTATCCAAGATAACTCGG+TGG 0.752723 1_1:-57106388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAATAAATTAATA+AGG + chr1_1:57117746-57117765 Msa0030710:intron 0.0%
!!! ATTAATTTTTAGCTTTTATT+TGG + chr1_1:57106509-57106528 Msa0030710:intron 10.0%
!! ATATGAATTATTATAAATCT+TGG - chr1_1:57107302-57107321 None:intergenic 10.0%
!!! AATTAATTTCAACAAATTTT+TGG + chr1_1:57108650-57108669 Msa0030710:intron 10.0%
!! TGAGAAAAATAAAATAAAAT+AGG + chr1_1:57110985-57111004 Msa0030710:intron 10.0%
!! CTAAATAAATAATTAATTGA+TGG + chr1_1:57111057-57111076 Msa0030710:intron 10.0%
!!! TGATTTTATCAAATTATTAA+CGG + chr1_1:57112188-57112207 Msa0030710:intron 10.0%
!! ATTTATGATTTACTTATTAA+TGG + chr1_1:57113618-57113637 Msa0030710:intron 10.0%
!! ATCATGATATTAAAATAATT+TGG + chr1_1:57114210-57114229 Msa0030710:intron 10.0%
!! TCATGATATTAAAATAATTT+GGG + chr1_1:57114211-57114230 Msa0030710:intron 10.0%
!!! ATAGAAAATATTAATGATTT+TGG + chr1_1:57114281-57114300 Msa0030710:intron 10.0%
!!! TTTTGATCTTTTAATATATA+TGG - chr1_1:57116577-57116596 None:intergenic 10.0%
!!! AAATGTATAAAATGTTTTAA+TGG + chr1_1:57116801-57116820 Msa0030710:intron 10.0%
!! ATTAAATAAATTAATAAGGT+CGG + chr1_1:57117750-57117769 Msa0030710:intron 10.0%
!! AATATAAAGTGATTTATATT+TGG + chr1_1:57118587-57118606 Msa0030710:intron 10.0%
!! TATATATATATATATATAGC+AGG + chr1_1:57119820-57119839 Msa0030710:intron 10.0%
!!! AGTTTAAAATCATAAAAATA+AGG + chr1_1:57120481-57120500 Msa0030710:intron 10.0%
!!! AATTAATTTCAACAAATTTT+TGG + chr1_1:57108650-57108669 Msa0030710:intron 10.0%
!! AAAAAAACAAAAAAAACAAA+GGG - chr1_1:57122659-57122678 None:intergenic 10.0%
!!! TTTTTTTGTTTTTTTGTTTT+TGG + chr1_1:57122664-57122683 Msa0030710:intron 10.0%
!!! TTTTTTGTTTTTTTGTTTTT+GGG + chr1_1:57122665-57122684 Msa0030710:intron 10.0%
!! TGATATAAATGAAATGAAAT+TGG - chr1_1:57105364-57105383 None:intergenic 15.0%
!! TAGCAACATTAATTATTTAA+GGG - chr1_1:57105645-57105664 None:intergenic 15.0%
!! ATAGCAACATTAATTATTTA+AGG - chr1_1:57105646-57105665 None:intergenic 15.0%
!!! TATATCAAACATTTTAGTAT+TGG - chr1_1:57106892-57106911 None:intergenic 15.0%
!!! AATAAATTCATTTTGAGAAA+AGG - chr1_1:57107669-57107688 None:intergenic 15.0%
!!! CATAATCAATTTATTTTTCA+TGG + chr1_1:57108012-57108031 Msa0030710:intron 15.0%
!! ATTAAGTGTATTATAGTAAA+AGG + chr1_1:57109222-57109241 Msa0030710:intron 15.0%
!!! TTTTTTCTTTTTTGTGAAAT+TGG + chr1_1:57110069-57110088 Msa0030710:intron 15.0%
!! TAACAACATTAATGATATAA+GGG - chr1_1:57112490-57112509 None:intergenic 15.0%
!! ATAACAACATTAATGATATA+AGG - chr1_1:57112491-57112510 None:intergenic 15.0%
!! TTATATGATTAATGTTATCA+TGG + chr1_1:57112521-57112540 Msa0030710:intron 15.0%
!! ATTACCTATTATGAAATATT+TGG + chr1_1:57113886-57113905 Msa0030710:intron 15.0%
!!! TATATAAATTTTGATGAGTA+TGG + chr1_1:57114006-57114025 Msa0030710:intron 15.0%
!!! GTGTTATATTTAATTTTATG+TGG + chr1_1:57114436-57114455 Msa0030710:intron 15.0%
!! AATATTAAATCTCATAAATC+CGG - chr1_1:57115440-57115459 None:intergenic 15.0%
!!! GAGATTTAATATTTTGAAAA+TGG + chr1_1:57115447-57115466 Msa0030710:intron 15.0%
!!! ATTTAATATTTTGAAAATGG+TGG + chr1_1:57115450-57115469 Msa0030710:intron 15.0%
!!! TTTAATATTTTGAAAATGGT+GGG + chr1_1:57115451-57115470 Msa0030710:intron 15.0%
!! AGAAATGATTGTAATAATAT+TGG - chr1_1:57116238-57116257 None:intergenic 15.0%
!! TGATTAAAAGTAATTATCAA+AGG + chr1_1:57116407-57116426 Msa0030710:intron 15.0%
!! AAAAGTGATATATTTCATAT+AGG - chr1_1:57117405-57117424 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr1_1:57118103-57118122 Msa0030710:intron 15.0%
!! AAAGACATTCAAATAATTAA+AGG + chr1_1:57118480-57118499 Msa0030710:intron 15.0%
!! AAGACATTCAAATAATTAAA+GGG + chr1_1:57118481-57118500 Msa0030710:intron 15.0%
!! ACACTAAAAATAAAATTTAG+AGG + chr1_1:57118647-57118666 Msa0030710:intron 15.0%
!!! ATTAATTTTTAGCTTTGATT+TGG + chr1_1:57119175-57119194 Msa0030710:intron 15.0%
!!! AATTGTTGTTAATTGTAATA+TGG + chr1_1:57119363-57119382 Msa0030710:intron 15.0%
!!! ATATATATATTTTACATAGC+AGG + chr1_1:57119699-57119718 Msa0030710:intron 15.0%
!! TATATATATATATATTCCAG+CGG - chr1_1:57119802-57119821 None:intergenic 15.0%
!!! AAATAATTTATTTTGAGCTA+AGG - chr1_1:57121584-57121603 None:intergenic 15.0%
!! ATATATAATCATTCAAACAT+TGG - chr1_1:57121644-57121663 None:intergenic 15.0%
!!! AACATTTTGTTTGTTATATT+AGG + chr1_1:57122382-57122401 Msa0030710:intron 15.0%
!! CAAAAAAACAAAAAAAACAA+AGG - chr1_1:57122660-57122679 None:intergenic 15.0%
!! ATAAATAAAAAACAATGAAG+GGG - chr1_1:57123020-57123039 None:intergenic 15.0%
!! GATAAATAAAAAACAATGAA+GGG - chr1_1:57123021-57123040 None:intergenic 15.0%
!! CAATATTAAGTTATTAACTA+TGG + chr1_1:57123096-57123115 Msa0030710:intron 15.0%
!!! ATGTAATTTTGTATGTTTTA+CGG + chr1_1:57123384-57123403 Msa0030710:intron 15.0%
!!! AAAACATAAACAATTTTGAA+CGG - chr1_1:57123963-57123982 None:intergenic 15.0%
!!! GTTGGTGATAATATAATAAA+CGG - chr1_1:57105445-57105464 None:intergenic 20.0%
!! AATAATTAATGTTGCTATCA+TGG + chr1_1:57105648-57105667 Msa0030710:intron 20.0%
!! ACATTATATTAATGCTATCA+TGG + chr1_1:57105673-57105692 Msa0030710:intron 20.0%
!!! TTTTCAATGTCATTAAGATA+GGG + chr1_1:57107235-57107254 Msa0030710:intron 20.0%
!!! TAAATCATATAGTTCCATTT+TGG + chr1_1:57107276-57107295 Msa0030710:intron 20.0%
!! ATAAATAAATGTCTTCTAGT+AGG - chr1_1:57107694-57107713 None:intergenic 20.0%
!!! TATCATATTTGTTGATAACT+CGG + chr1_1:57108040-57108059 Msa0030710:intron 20.0%
!!! AAGAACATATAACTTTGTTT+TGG - chr1_1:57108193-57108212 None:intergenic 20.0%
!!! ATTTCAAAAAGCTTTAAAAG+TGG - chr1_1:57108526-57108545 None:intergenic 20.0%
!! GCTAATTGAAATTATATCAA+AGG + chr1_1:57108620-57108639 Msa0030710:CDS 20.0%
!!! AACATTTTGTTTGCTATATT+AGG + chr1_1:57108812-57108831 Msa0030710:intron 20.0%
!!! ATTGTATGCTTTTTCTATTT+GGG + chr1_1:57109007-57109026 Msa0030710:intron 20.0%
!!! TTATAAATCAATATTGACTG+TGG + chr1_1:57109134-57109153 Msa0030710:intron 20.0%
!!! ATTAAAAGTACGAAGTTTAT+TGG + chr1_1:57109256-57109275 Msa0030710:intron 20.0%
!! AAATTGAATTGAGAATTTCA+TGG + chr1_1:57109816-57109835 Msa0030710:intron 20.0%
!!! ATGAATTTGTTTGATTATCA+AGG + chr1_1:57109933-57109952 Msa0030710:intron 20.0%
!!! TGAATTTGTTTGATTATCAA+GGG + chr1_1:57109934-57109953 Msa0030710:intron 20.0%
!! AACCTTAATTGGATAAAATA+AGG - chr1_1:57109989-57110008 None:intergenic 20.0%
!! AGTCAATGATTTGAAAAATT+GGG - chr1_1:57110050-57110069 None:intergenic 20.0%
!! AAGTCAATGATTTGAAAAAT+TGG - chr1_1:57110051-57110070 None:intergenic 20.0%
!!! TTTTTTTTCCTTTTCAGTTT+TGG - chr1_1:57110169-57110188 None:intergenic 20.0%
!! ATGACAAAGTTATAAAGAAT+TGG + chr1_1:57110354-57110373 Msa0030710:intron 20.0%
!! ATAATAATGAACTTAAAACG+AGG + chr1_1:57110382-57110401 Msa0030710:intron 20.0%
!! TAATAATGAACTTAAAACGA+GGG + chr1_1:57110383-57110402 Msa0030710:intron 20.0%
!!! AATTACTGTTTTAGTTAGAA+CGG + chr1_1:57110462-57110481 Msa0030710:intron 20.0%
!! ATAGAATAGAATTCATAACA+AGG - chr1_1:57110862-57110881 None:intergenic 20.0%
!! AATCATATACAAATAGTATG+TGG + chr1_1:57111026-57111045 Msa0030710:intron 20.0%
!! AATAAGAATTTAGGTCAAAT+AGG + chr1_1:57111291-57111310 Msa0030710:intron 20.0%
!! ATAAGAATTTAGGTCAAATA+GGG + chr1_1:57111292-57111311 Msa0030710:intron 20.0%
!!! GTAACAAATGAAACATTTTA+AGG + chr1_1:57111397-57111416 Msa0030710:intron 20.0%
!!! TCTTTTTTACCTAAAACAAA+TGG - chr1_1:57111486-57111505 None:intergenic 20.0%
!!! TTTGTTTTAGGTAAAAAAGA+AGG + chr1_1:57111486-57111505 Msa0030710:intron 20.0%
!!! TTGTTTTAGGTAAAAAAGAA+GGG + chr1_1:57111487-57111506 Msa0030710:intron 20.0%
!! TATTTAATATCAAGTTTGAG+TGG - chr1_1:57112056-57112075 None:intergenic 20.0%
!! TTTAGTGTAATTATATGTGT+CGG - chr1_1:57112163-57112182 None:intergenic 20.0%
!!! GTTGGTGATAATATAATAAA+TGG - chr1_1:57105445-57105464 None:intergenic 20.0%
!! TATCATTAATGTTGTTATCA+TGG + chr1_1:57112493-57112512 Msa0030710:intron 20.0%
!! AAATATGAAGAAGAAATAGA+AGG + chr1_1:57112735-57112754 Msa0030710:intron 20.0%
!!! CTAAAGTGATTACATTATTT+TGG - chr1_1:57112851-57112870 None:intergenic 20.0%
!! TATAATGCACTATAAATACT+TGG + chr1_1:57113112-57113131 Msa0030710:intron 20.0%
!!! ATTAATTTGACACACAATTT+TGG + chr1_1:57113144-57113163 Msa0030710:intron 20.0%
!!! AACAGTATTTTACAGATTTA+TGG - chr1_1:57113263-57113282 None:intergenic 20.0%
!! TAAATCTGTAAAATACTGTT+AGG + chr1_1:57113263-57113282 Msa0030710:intron 20.0%
!! GTTTATGTTAAATTTACATG+TGG + chr1_1:57113762-57113781 Msa0030710:intron 20.0%
!! ATGTTCAAATTAACATCAAA+TGG - chr1_1:57113845-57113864 None:intergenic 20.0%
!! AACACCAAATATTTCATAAT+AGG - chr1_1:57113893-57113912 None:intergenic 20.0%
!! AATATGTTAGATTTAACATG+TGG + chr1_1:57113948-57113967 Msa0030710:intron 20.0%
!! TAAATTGTCAAAATATCAAG+TGG + chr1_1:57114080-57114099 Msa0030710:intron 20.0%
!! CATGATAATATGAAAAGTAA+TGG + chr1_1:57114173-57114192 Msa0030710:intron 20.0%
!! ATTCAATGTATGATATATCT+TGG + chr1_1:57114552-57114571 Msa0030710:intron 20.0%
!! GTTAAATATTGTTATAGCAA+AGG + chr1_1:57114616-57114635 Msa0030710:intron 20.0%
!! AATACATTGAAGACATTATT+AGG + chr1_1:57114879-57114898 Msa0030710:intron 20.0%
!! ATACATTGAAGACATTATTA+GGG + chr1_1:57114880-57114899 Msa0030710:intron 20.0%
!!! ATTGGTAATCAATTAGATTT+GGG - chr1_1:57114918-57114937 None:intergenic 20.0%
!! AAACTTAACTTACTAAGTAA+TGG + chr1_1:57115374-57115393 Msa0030710:intron 20.0%
!!! TTAATATTTTGAAAATGGTG+GGG + chr1_1:57115452-57115471 Msa0030710:intron 20.0%
!!! CTAAAGTGATTACATTATTT+TGG - chr1_1:57112851-57112870 None:intergenic 20.0%
!! TATAATGCACTATAAATACT+TGG + chr1_1:57113112-57113131 Msa0030710:intron 20.0%
!!! AACAGTATTTTACAGATTTA+TGG - chr1_1:57113263-57113282 None:intergenic 20.0%
!! TAAATCTGTAAAATACTGTT+AGG + chr1_1:57113263-57113282 Msa0030710:intron 20.0%
!! TTCACAATATTTCACATTAA+AGG + chr1_1:57116060-57116079 Msa0030710:intron 20.0%
!! AATATTTCACATTAAAGGTT+TGG + chr1_1:57116065-57116084 Msa0030710:intron 20.0%
!!! AATCAAGATTTTAATGCTTT+CGG - chr1_1:57116392-57116411 None:intergenic 20.0%
!! TGACATATTTACACAATAAT+TGG + chr1_1:57117330-57117349 Msa0030710:intron 20.0%
!! TATATTTCATATAGGAGTTT+AGG - chr1_1:57117397-57117416 None:intergenic 20.0%
!!! ATTTTAGCCTAAAATGTTTA+AGG - chr1_1:57117797-57117816 None:intergenic 20.0%
!!! GATTATTAAAAATTCCGTTT+TGG - chr1_1:57117864-57117883 None:intergenic 20.0%
!!! ACGGAATTTTTAATAATCAA+AGG + chr1_1:57117866-57117885 Msa0030710:intron 20.0%
!!! ACAATTTCTAAGTTTCATTT+TGG - chr1_1:57117893-57117912 None:intergenic 20.0%
!! TAAAAATAACTAGGCTTAAT+TGG - chr1_1:57117931-57117950 None:intergenic 20.0%
!!! AATTAAGCCTAGTTATTTTT+AGG + chr1_1:57117930-57117949 Msa0030710:intron 20.0%
!!! ATTAAGCCTAGTTATTTTTA+GGG + chr1_1:57117931-57117950 Msa0030710:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr1_1:57118046-57118065 Msa0030710:intron 20.0%
!! AATAGTTAATAAGGGTAATT+TGG - chr1_1:57118080-57118099 None:intergenic 20.0%
!! AAATTACCCTTATTAACTAT+TGG + chr1_1:57118079-57118098 Msa0030710:intron 20.0%
!! AACTAACCAATAGTTAATAA+GGG - chr1_1:57118088-57118107 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr1_1:57118089-57118108 None:intergenic 20.0%
!! AGACATTCAAATAATTAAAG+GGG + chr1_1:57118482-57118501 Msa0030710:intron 20.0%
!! AATATGAACATATGTTTGTT+TGG - chr1_1:57118793-57118812 None:intergenic 20.0%
!! TGTATGTATAAAGTATGATA+AGG + chr1_1:57118815-57118834 Msa0030710:intron 20.0%
!! AACAACAATTTGAATTACTT+AGG - chr1_1:57119353-57119372 None:intergenic 20.0%
!!! TGTAATATGGAATCTTATTT+TGG + chr1_1:57119376-57119395 Msa0030710:intron 20.0%
!!! GTTTTTTCTTCTTAGTATTT+TGG - chr1_1:57119751-57119770 None:intergenic 20.0%
!! TAAACACCTATAATACTAAT+AGG + chr1_1:57119776-57119795 Msa0030710:intron 20.0%
!! AAAAACCTGCAATATATAAT+AGG + chr1_1:57119877-57119896 Msa0030710:intron 20.0%
!! TTGTGTAAACTTTATTGTTA+GGG - chr1_1:57120385-57120404 None:intergenic 20.0%
!! ATTGTGTAAACTTTATTGTT+AGG - chr1_1:57120386-57120405 None:intergenic 20.0%
!! ACATAAATTCAATATCAACA+AGG + chr1_1:57120408-57120427 Msa0030710:intron 20.0%
!!! GGAAGTTTTATTTTAAAACA+AGG + chr1_1:57120594-57120613 Msa0030710:intron 20.0%
!!! TTTATTTTAAAACAAGGATG+TGG + chr1_1:57120600-57120619 Msa0030710:intron 20.0%
!! ATACGAATTATTACAAATCT+TGG - chr1_1:57121237-57121256 None:intergenic 20.0%
!! TAAAAATACAAACAAAATCG+CGG + chr1_1:57121478-57121497 Msa0030710:intron 20.0%
!!! ATAAGTTTTACGATGTATTT+TGG + chr1_1:57121870-57121889 Msa0030710:intron 20.0%
!! CATGAAAAAGAAATTGATTA+TGG - chr1_1:57121908-57121927 None:intergenic 20.0%
!!! CATAATCAATTTCTTTTTCA+TGG + chr1_1:57121906-57121925 Msa0030710:intron 20.0%
!!! TATAACTTTGTTTTTGCAAT+TGG - chr1_1:57122081-57122100 None:intergenic 20.0%
!! GTTAATTGAAATTGTATCAA+AGG + chr1_1:57122191-57122210 Msa0030710:CDS 20.0%
!! AATCTATTAATTACTAACTC+TGG + chr1_1:57122329-57122348 Msa0030710:CDS 20.0%
!!! TTTGTTATATTAGGAAATTC+TGG + chr1_1:57122391-57122410 Msa0030710:intron 20.0%
!! TTTGGATATATAAATGTGTT+TGG - chr1_1:57122731-57122750 None:intergenic 20.0%
!! CGATAAATAAAAAACAATGA+AGG - chr1_1:57123022-57123041 None:intergenic 20.0%
!!! TAGGATTTTAAGATTCTAAT+AGG - chr1_1:57123875-57123894 None:intergenic 20.0%
!!! AAACATAAACAATTTTGAAC+GGG - chr1_1:57123962-57123981 None:intergenic 20.0%
!!! TTTTCCTAAGATTAGTTCAT+AGG + chr1_1:57105395-57105414 Msa0030710:five_prime_UTR 25.0%
!! AGTTCATAGGTTCATTTTAA+TGG + chr1_1:57105408-57105427 Msa0030710:exon 25.0%
! TGAATTGAACAATAAATTCG+AGG + chr1_1:57105903-57105922 Msa0030710:intron 25.0%
!!! TTACCTCTACATTTGATTTT+TGG - chr1_1:57105929-57105948 None:intergenic 25.0%
!! CATCATGTTAGAATCAATTT+TGG + chr1_1:57105965-57105984 Msa0030710:intron 25.0%
!!! TGTATGTTTGATTTCACTTT+TGG - chr1_1:57106068-57106087 None:intergenic 25.0%
!! CTTATTTGCAATCTTTTCTT+AGG + chr1_1:57106188-57106207 Msa0030710:intron 25.0%
! TATATCAGAAGAAGAAGTAA+TGG + chr1_1:57106245-57106264 Msa0030710:intron 25.0%
!!! TTTTAGCTTTTATTTGGTAC+AGG + chr1_1:57106515-57106534 Msa0030710:intron 25.0%
! AACAACAATTTGAATTACCT+AGG - chr1_1:57106716-57106735 None:intergenic 25.0%
! TTTGTGCATTCATTTCAAAA+AGG + chr1_1:57106757-57106776 Msa0030710:intron 25.0%
! ACAACGAATAAAGAGAATAA+GGG - chr1_1:57106940-57106959 None:intergenic 25.0%
! AAGATTAAGAAAACAATCTG+CGG + chr1_1:57107044-57107063 Msa0030710:intron 25.0%
!! AATACTATTCAGCCAAATTT+TGG + chr1_1:57107085-57107104 Msa0030710:intron 25.0%
!! AATGCATTCTTTTCATGATT+TGG + chr1_1:57107183-57107202 Msa0030710:intron 25.0%
!! CTTTTCAATGTCATTAAGAT+AGG + chr1_1:57107234-57107253 Msa0030710:intron 25.0%
! TTTCAATGTCATTAAGATAG+GGG + chr1_1:57107236-57107255 Msa0030710:intron 25.0%
! ATTATAAATCTTGGCCAAAA+TGG - chr1_1:57107293-57107312 None:intergenic 25.0%
! ATATATGATTTGAATGCAAC+AGG + chr1_1:57107318-57107337 Msa0030710:intron 25.0%
! ACAAACAACATTCTCAAATA+GGG - chr1_1:57107368-57107387 None:intergenic 25.0%
!! TATGTAATTTTGTTCACTTC+TGG + chr1_1:57107497-57107516 Msa0030710:intron 25.0%
!! TTTTATAACCATCTCTTTCT+CGG - chr1_1:57107584-57107603 None:intergenic 25.0%
! GAGATGGTTATAAAATTAAC+CGG + chr1_1:57107589-57107608 Msa0030710:intron 25.0%
! ATCAACTATTCATATAGTTC+CGG - chr1_1:57107611-57107630 None:intergenic 25.0%
! ATATATAATCCTCCAAACAT+TGG - chr1_1:57107733-57107752 None:intergenic 25.0%
!! ATCTGATTTTCAAAATGTCA+AGG - chr1_1:57107889-57107908 None:intergenic 25.0%
!!! TTGACATTTTGAAAATCAGA+TGG + chr1_1:57107888-57107907 Msa0030710:CDS 25.0%
!!! ATCAATTTATTTTTCATGGC+AGG + chr1_1:57108016-57108035 Msa0030710:intron 25.0%
!!! ATCATATTTGTTGATAACTC+GGG + chr1_1:57108041-57108060 Msa0030710:intron 25.0%
!! TTATCTTTCAACGTATTTTC+TGG + chr1_1:57108145-57108164 Msa0030710:intron 25.0%
! AAAAAGCCACATAATTTAAG+TGG - chr1_1:57108261-57108280 None:intergenic 25.0%
! AAAGAGTTAGGAAAAAACTT+TGG - chr1_1:57108681-57108700 None:intergenic 25.0%
!! TTTCTGAAAAACAATCTTAC+AGG - chr1_1:57108794-57108813 None:intergenic 25.0%
!! TCTGGTTTCTTTATAGTTTA+TGG + chr1_1:57108839-57108858 Msa0030710:intron 25.0%
!!! TAGATCTTGTCATTTTAGAA+GGG + chr1_1:57108961-57108980 Msa0030710:CDS 25.0%
!!! CATTGTATGCTTTTTCTATT+TGG + chr1_1:57109006-57109025 Msa0030710:intron 25.0%
! GATTTATAAAAGTGACAGAA+AGG - chr1_1:57109123-57109142 None:intergenic 25.0%
!!! TTCCTTTCTAGTTTCTTTTA+AGG - chr1_1:57109304-57109323 None:intergenic 25.0%
! TAACTAAATACACCTATTGA+AGG - chr1_1:57109404-57109423 None:intergenic 25.0%
! CAATAATTCTTGTCAGAAAT+TGG + chr1_1:57109426-57109445 Msa0030710:intron 25.0%
!!! TCTGTCATTATTTTTCTTAC+AGG + chr1_1:57109625-57109644 Msa0030710:intron 25.0%
! CTAATCTGTATATGATCAAA+TGG - chr1_1:57109789-57109808 None:intergenic 25.0%
!!! ATTTGAGGTAATGTTGTTTT+AGG + chr1_1:57109855-57109874 Msa0030710:intron 25.0%
!!! AATGTTGTTTTAGGAATAAG+AGG + chr1_1:57109864-57109883 Msa0030710:intron 25.0%
!!! ATGTTGTTTTAGGAATAAGA+GGG + chr1_1:57109865-57109884 Msa0030710:intron 25.0%
!!! CTCCTTATTTTATCCAATTA+AGG + chr1_1:57109984-57110003 Msa0030710:intron 25.0%
! GTGAAATTGGAATAGAAATA+TGG + chr1_1:57110082-57110101 Msa0030710:intron 25.0%
! AATAATGAACTTAAAACGAG+GGG + chr1_1:57110384-57110403 Msa0030710:intron 25.0%
!! TATCCTCAGATTTTCTAATA+CGG - chr1_1:57110419-57110438 None:intergenic 25.0%
! TATTAGAAAATCTGAGGATA+AGG + chr1_1:57110419-57110438 Msa0030710:intron 25.0%
!!! ATTACTGTTTTAGTTAGAAC+GGG + chr1_1:57110463-57110482 Msa0030710:intron 25.0%
! TCATTGTAGCAAATATATGT+AGG + chr1_1:57110810-57110829 Msa0030710:intron 25.0%
! CATTGTAGCAAATATATGTA+GGG + chr1_1:57110811-57110830 Msa0030710:intron 25.0%
! TTCTATTCTATATGTGTGAT+TGG + chr1_1:57110871-57110890 Msa0030710:intron 25.0%
!! ATTTTTCTCAAATAGTCTAG+TGG - chr1_1:57110975-57110994 None:intergenic 25.0%
! TAGGATATATATTATGCATG+AGG + chr1_1:57111210-57111229 Msa0030710:intron 25.0%
! AGGATATATATTATGCATGA+GGG + chr1_1:57111211-57111230 Msa0030710:intron 25.0%
! GATACCTTCAATAAGAATTT+AGG + chr1_1:57111282-57111301 Msa0030710:intron 25.0%
! TTGACCTAAATTCTTATTGA+AGG - chr1_1:57111289-57111308 None:intergenic 25.0%
! CCTCTAATGAGATAAAATTA+GGG + chr1_1:57111553-57111572 Msa0030710:intron 25.0%
! CTCTAATGAGATAAAATTAG+GGG + chr1_1:57111554-57111573 Msa0030710:intron 25.0%
! AGTAATTAACGTCATTCTAA+AGG + chr1_1:57111870-57111889 Msa0030710:intron 25.0%
! GTAATTAACGTCATTCTAAA+GGG + chr1_1:57111871-57111890 Msa0030710:intron 25.0%
!! TAATTAACGTCATTCTAAAG+GGG + chr1_1:57111872-57111891 Msa0030710:intron 25.0%
! TGCTTCTGTAAAATGAAAAT+GGG - chr1_1:57111957-57111976 None:intergenic 25.0%
! TTGCTTCTGTAAAATGAAAA+TGG - chr1_1:57111958-57111977 None:intergenic 25.0%
! TATAGCTATCAACTAATCTT+AGG - chr1_1:57112095-57112114 None:intergenic 25.0%
! TATTAAAATGAAGCTGGATA+TGG - chr1_1:57112255-57112274 None:intergenic 25.0%
!!! TGTTTTATGGTTGTTGTTTA+TGG + chr1_1:57112652-57112671 Msa0030710:intron 25.0%
!!! GTTTATGGATTTTTTTTCCT+TGG + chr1_1:57112667-57112686 Msa0030710:intron 25.0%
! TCAACATTCATAAAAATCCA+AGG - chr1_1:57112687-57112706 None:intergenic 25.0%
!! TTTATGAATGTTGATGAATG+TGG + chr1_1:57112693-57112712 Msa0030710:intron 25.0%
! AAGGAAAGAAAAATCAATGT+TGG + chr1_1:57112772-57112791 Msa0030710:intron 25.0%
!!! ATTGATTTTGCATGATTGAA+GGG + chr1_1:57112813-57112832 Msa0030710:intron 25.0%
! TTCATATACATTAGAACCTT+TGG + chr1_1:57112901-57112920 Msa0030710:intron 25.0%
!!! TTTGACTTGAATCAATGTTA+TGG - chr1_1:57113064-57113083 None:intergenic 25.0%
!!! ATAACATTGATTCAAGTCAA+AGG + chr1_1:57113063-57113082 Msa0030710:intron 25.0%
!!! TAACATTGATTCAAGTCAAA+GGG + chr1_1:57113064-57113083 Msa0030710:intron 25.0%
! ACTATAAATACTTGGCATTT+GGG + chr1_1:57113120-57113139 Msa0030710:intron 25.0%
! AACTATAATTGGATGCAATA+AGG - chr1_1:57113362-57113381 None:intergenic 25.0%
! TTGCATCCAATTATAGTTAT+TGG + chr1_1:57113364-57113383 Msa0030710:intron 25.0%
! ATCCAATTATAGTTATTGGT+GGG + chr1_1:57113368-57113387 Msa0030710:intron 25.0%
!! GCATAACTATTAAACTTTTC+AGG + chr1_1:57113445-57113464 Msa0030710:intron 25.0%
! TGTTGTATATCTTGATTGTT+GGG - chr1_1:57113492-57113511 None:intergenic 25.0%
! TTGTTGTATATCTTGATTGT+TGG - chr1_1:57113493-57113512 None:intergenic 25.0%
! TCAAGATATACAACAATCTT+TGG + chr1_1:57113497-57113516 Msa0030710:intron 25.0%
!! TTATTAATGGCTGCAATTTT+GGG + chr1_1:57113631-57113650 Msa0030710:intron 25.0%
!! TATATTTTCACCCATAACTA+CGG + chr1_1:57113667-57113686 Msa0030710:intron 25.0%
!! CATTTTATGAACATATGTTG+TGG + chr1_1:57113707-57113726 Msa0030710:intron 25.0%
! ACATATGTTGTGGAAATTTA+TGG + chr1_1:57113717-57113736 Msa0030710:intron 25.0%
!!! TGTAAGTTGATATATGTTCA+TGG + chr1_1:57114249-57114268 Msa0030710:intron 25.0%
! ATAACCAAACTTCATAAGAT+GGG - chr1_1:57114485-57114504 None:intergenic 25.0%
!! CATTGGTAATCAATTAGATT+TGG - chr1_1:57114919-57114938 None:intergenic 25.0%
! CAAATCTAATTGATTACCAA+TGG + chr1_1:57114917-57114936 Msa0030710:intron 25.0%
! ACTCTTAAATTCTCATGAAA+AGG + chr1_1:57115206-57115225 Msa0030710:intron 25.0%
! CTCTTAAATTCTCATGAAAA+GGG + chr1_1:57115207-57115226 Msa0030710:intron 25.0%
! ATAACTTACACATAGAATCT+CGG - chr1_1:57115290-57115309 None:intergenic 25.0%
!!! TAATATTTTGAAAATGGTGG+GGG + chr1_1:57115453-57115472 Msa0030710:intron 25.0%
! TTCATATACATTAGAACCTT+TGG + chr1_1:57112901-57112920 Msa0030710:intron 25.0%
!!! TTTGACTTGAATCAATGTTA+TGG - chr1_1:57113064-57113083 None:intergenic 25.0%
!!! ATAACATTGATTCAAGTCAA+AGG + chr1_1:57113063-57113082 Msa0030710:intron 25.0%
!!! TAACATTGATTCAAGTCAAA+GGG + chr1_1:57113064-57113083 Msa0030710:intron 25.0%
! ACTATAAATACTTGGCATTT+GGG + chr1_1:57113120-57113139 Msa0030710:intron 25.0%
!!! ATTAATTTGGCACACAATTT+TGG + chr1_1:57115786-57115805 Msa0030710:intron 25.0%
!!! TTTTACGTTTATGTCATTTG+TGG - chr1_1:57116119-57116138 None:intergenic 25.0%
! TTGTTATCGTTTAAGGAATT+TGG - chr1_1:57116323-57116342 None:intergenic 25.0%
!! ATCAACTTTGTTATCGTTTA+AGG - chr1_1:57116330-57116349 None:intergenic 25.0%
!! TAAACGATAACAAAGTTGAT+CGG + chr1_1:57116330-57116349 Msa0030710:intron 25.0%
!!! TTTTATACATTTCTAGAGAG+AGG - chr1_1:57116793-57116812 None:intergenic 25.0%
!! AGGTAAGAATGCTATTTAAA+TGG + chr1_1:57116846-57116865 Msa0030710:intron 25.0%
!!! ATCACTTTTAAACACTTATC+AGG + chr1_1:57117416-57117435 Msa0030710:intron 25.0%
! AACTATAATTGGATGCAATA+AGG - chr1_1:57113362-57113381 None:intergenic 25.0%
! TTGCATCCAATTATAGTTAT+TGG + chr1_1:57113364-57113383 Msa0030710:intron 25.0%
! ATCCAATTATAGTTATTGGT+GGG + chr1_1:57113368-57113387 Msa0030710:intron 25.0%
!! GCATAACTATTAAACTTTTC+AGG + chr1_1:57113445-57113464 Msa0030710:intron 25.0%
! TGTTGTATATCTTGATTGTT+GGG - chr1_1:57113492-57113511 None:intergenic 25.0%
! TTGTTGTATATCTTGATTGT+TGG - chr1_1:57113493-57113512 None:intergenic 25.0%
! TCAAGATATACAACAATCTT+TGG + chr1_1:57113497-57113516 Msa0030710:intron 25.0%
! TTAGGCTAAAATTAACATAG+CGG + chr1_1:57117805-57117824 Msa0030710:intron 25.0%
! ATGAAACTTAGAAATTGTTG+AGG + chr1_1:57117895-57117914 Msa0030710:intron 25.0%
! TGAAACTTAGAAATTGTTGA+GGG + chr1_1:57117896-57117915 Msa0030710:intron 25.0%
! TCAATAGAATTAATCAAAGC+AGG - chr1_1:57118260-57118279 None:intergenic 25.0%
! ATATTTATATGGCACTAACT+GGG - chr1_1:57118376-57118395 None:intergenic 25.0%
! TATATTTATATGGCACTAAC+TGG - chr1_1:57118377-57118396 None:intergenic 25.0%
! AGAAGAATCATTCAATCAAA+TGG - chr1_1:57118449-57118468 None:intergenic 25.0%
! ATGTTCTCTCAAAACAAAAT+TGG + chr1_1:57119099-57119118 Msa0030710:intron 25.0%
! TGTTCTCTCAAAACAAAATT+GGG + chr1_1:57119100-57119119 Msa0030710:intron 25.0%
! TAACCTTTGAGCATAAATTT+CGG - chr1_1:57119253-57119272 None:intergenic 25.0%
!! CTCTTATTATTTCATTGGTT+AGG + chr1_1:57119279-57119298 Msa0030710:intron 25.0%
! TTGGTTCATTTCTTTCAAAA+AGG + chr1_1:57119395-57119414 Msa0030710:intron 25.0%
! AAATGAGGTAAAACACATAA+GGG - chr1_1:57119563-57119582 None:intergenic 25.0%
! AAAATGAGGTAAAACACATA+AGG - chr1_1:57119564-57119583 None:intergenic 25.0%
! AAAAGAATAAGGAGAAAATG+AGG - chr1_1:57119578-57119597 None:intergenic 25.0%
!! TCATTTTCTCCTTATTCTTT+TGG + chr1_1:57119577-57119596 Msa0030710:intron 25.0%
! GAACAAAAACCAAAAGAATA+AGG - chr1_1:57119589-57119608 None:intergenic 25.0%
!! CTTTTCCTATTATATATTGC+AGG - chr1_1:57119885-57119904 None:intergenic 25.0%
! CATGAGTACATAAAAATCAT+AGG + chr1_1:57120252-57120271 Msa0030710:intron 25.0%
! GGTTTGATAAGTGATTATTT+GGG - chr1_1:57120364-57120383 None:intergenic 25.0%
! AGAAATTACTAAAGCAATAG+TGG + chr1_1:57120836-57120855 Msa0030710:intron 25.0%
! GAAATTACTAAAGCAATAGT+GGG + chr1_1:57120837-57120856 Msa0030710:intron 25.0%
! AAAATTAGAAAGATTTGTGC+AGG + chr1_1:57120900-57120919 Msa0030710:intron 25.0%
! AAGTTAAAACGAACAATCTA+CGG + chr1_1:57120991-57121010 Msa0030710:intron 25.0%
! CCAACAAAATTATGAAAAGA+AGG - chr1_1:57121132-57121151 None:intergenic 25.0%
!! CCTTCTTTTCATAATTTTGT+TGG + chr1_1:57121129-57121148 Msa0030710:intron 25.0%
!! GTGTTAAATTTGTTCAACTT+TGG - chr1_1:57107209-57107228 None:intergenic 25.0%
! TTAATGAGATTGATAGGTAA+TGG - chr1_1:57121177-57121196 None:intergenic 25.0%
! AATGATGCAATTAAAGATGA+AGG + chr1_1:57121326-57121345 Msa0030710:CDS 25.0%
!! TTTAGTTAGAGGAATTTTTG+CGG + chr1_1:57107429-57107448 Msa0030710:CDS 25.0%
!! TATGAATAGTTGATTCAGTA+TGG + chr1_1:57107617-57107636 Msa0030710:intron 25.0%
!!! ATCATATTTGTTGATAACTC+TGG + chr1_1:57108041-57108060 Msa0030710:intron 25.0%
!! GTTTCTGAAAAAAATCTTAC+AGG - chr1_1:57122365-57122384 None:intergenic 25.0%
!! TCTGGTTTCTTTATAGTTTA+TGG + chr1_1:57108839-57108858 Msa0030710:intron 25.0%
! AAAAAACAAAGGGAGTAAAT+AGG - chr1_1:57122649-57122668 None:intergenic 25.0%
! GTAATGTGAAAATTGAACAT+AGG - chr1_1:57122826-57122845 None:intergenic 25.0%
!! ATTTTCACATTACAATCCTT+TGG + chr1_1:57122833-57122852 Msa0030710:intron 25.0%
! AGATTCAATTCCATTAAACA+CGG - chr1_1:57122867-57122886 None:intergenic 25.0%
!!! CATATTTTGAACCAACTTAT+GGG - chr1_1:57122893-57122912 None:intergenic 25.0%
!!! TCATATTTTGAACCAACTTA+TGG - chr1_1:57122894-57122913 None:intergenic 25.0%
! CATTTATACATTCAACAACT+CGG + chr1_1:57122927-57122946 Msa0030710:intron 25.0%
!! CTTTAGTATTGAAGTTGTAT+TGG - chr1_1:57122974-57122993 None:intergenic 25.0%
!! ATCAAAAGTACAATGCTTAT+TGG + chr1_1:57123219-57123238 Msa0030710:intron 25.0%
! AAATTAAGCGACAACTAAAA+AGG + chr1_1:57123263-57123282 Msa0030710:intron 25.0%
! CAATACTAAGATCTATTGTT+CGG + chr1_1:57123316-57123335 Msa0030710:intron 25.0%
! CTTCTTAAAATACGAGAAAT+TGG + chr1_1:57109573-57109592 Msa0030710:intron 25.0%
!! TTTAAGAAATTTTGCAACTC+CGG - chr1_1:57123801-57123820 None:intergenic 25.0%
! TTGCAAAATTTCTTAAATCG+CGG + chr1_1:57123804-57123823 Msa0030710:CDS 25.0%
TGAACCTATGAACTAATCTT+AGG - chr1_1:57105402-57105421 None:intergenic 30.0%
ATGAAGGAATACAATTCCAA+TGG - chr1_1:57105489-57105508 None:intergenic 30.0%
! AATGATGATGATGATGATGA+AGG - chr1_1:57105505-57105524 None:intergenic 30.0%
ATTGATGAATACAACGTTGT+TGG - chr1_1:57105585-57105604 None:intergenic 30.0%
ATTATTTAAGGGATACCTAG+TGG - chr1_1:57105634-57105653 None:intergenic 30.0%
TCTAACATGATGCTAGAATT+TGG - chr1_1:57105957-57105976 None:intergenic 30.0%
! CATGTTAGAATCAATTTTGG+AGG + chr1_1:57105968-57105987 Msa0030710:intron 30.0%
!! TTTGATTTCACTTTTGGAAG+AGG - chr1_1:57106062-57106081 None:intergenic 30.0%
TCACATGAAAAGTGACAATT+GGG + chr1_1:57106132-57106151 Msa0030710:intron 30.0%
! CAATTGGGTAATGTTACTTA+AGG + chr1_1:57106147-57106166 Msa0030710:intron 30.0%
TCAGTATCATCCATCAATAA+AGG - chr1_1:57106300-57106319 None:intergenic 30.0%
GAGATTTATCCAAGATAACT+CGG - chr1_1:57106394-57106413 None:intergenic 30.0%
! TTTTGTGAGATCATACTTGT+AGG - chr1_1:57106436-57106455 None:intergenic 30.0%
! AAGCTGAAATTTTTGCTCAA+AGG + chr1_1:57106581-57106600 Msa0030710:CDS 30.0%
! GAAATTTTTGCTCAAAGGTT+AGG + chr1_1:57106586-57106605 Msa0030710:intron 30.0%
ATCCTTGTATGTTCTTTATC+TGG + chr1_1:57106840-57106859 Msa0030710:intron 30.0%
CACAACGAATAAAGAGAATA+AGG - chr1_1:57106941-57106960 None:intergenic 30.0%
AGATATCTTCAAGAAAGTCA+AGG + chr1_1:57107020-57107039 Msa0030710:CDS 30.0%
CAGACAATTCTTCCAAAATT+TGG - chr1_1:57107100-57107119 None:intergenic 30.0%
AAGAATTGTCTGTGTATATC+TGG + chr1_1:57107108-57107127 Msa0030710:intron 30.0%
AACATCTTGCAGAAAGAATA+TGG + chr1_1:57107152-57107171 Msa0030710:intron 30.0%
ACATCTTGCAGAAAGAATAT+GGG + chr1_1:57107153-57107172 Msa0030710:intron 30.0%
GACAAACAACATTCTCAAAT+AGG - chr1_1:57107369-57107388 None:intergenic 30.0%
AATGATGCTATTGAAGATGA+AGG + chr1_1:57107391-57107410 Msa0030710:CDS 30.0%
! TTAGTTAGAGGAATTTTTGC+AGG + chr1_1:57107430-57107449 Msa0030710:CDS 30.0%
! TAGTTAGAGGAATTTTTGCA+GGG + chr1_1:57107431-57107450 Msa0030710:CDS 30.0%
TAGAGAAAATCAAACTACCT+GGG - chr1_1:57107479-57107498 None:intergenic 30.0%
ATAGAGAAAATCAAACTACC+TGG - chr1_1:57107480-57107499 None:intergenic 30.0%
!! CAGATTTTTAAGCAAGTGTT+AGG - chr1_1:57107541-57107560 None:intergenic 30.0%
CCTTACAAATTGTCAGTATA+TGG - chr1_1:57107643-57107662 None:intergenic 30.0%
CCATATACTGACAATTTGTA+AGG + chr1_1:57107640-57107659 Msa0030710:intron 30.0%
TACAATCATATGCCAATGTT+TGG + chr1_1:57107718-57107737 Msa0030710:intron 30.0%
ATTGATTATGACACTACTCT+TGG - chr1_1:57108002-57108021 None:intergenic 30.0%
!! TTTCAACGTATTTTCTGGTA+TGG + chr1_1:57108150-57108169 Msa0030710:intron 30.0%
!!! TATAACTTTGTTTTGGCAGT+TGG - chr1_1:57108186-57108205 None:intergenic 30.0%
! TGTTGAAGTGTCTATATTTG+TGG + chr1_1:57108214-57108233 Msa0030710:intron 30.0%
GTTGAACCACTTAAATTATG+TGG + chr1_1:57108252-57108271 Msa0030710:intron 30.0%
!!! CAATTTTGTGTTTTAGCAGT+GGG + chr1_1:57108314-57108333 Msa0030710:intron 30.0%
!!! AATTTTGTGTTTTAGCAGTG+GGG + chr1_1:57108315-57108334 Msa0030710:intron 30.0%
TATAAAGCGAAATGAATTCC+AGG - chr1_1:57108410-57108429 None:intergenic 30.0%
TCGCTTTATAAAGAACTTAG+AGG + chr1_1:57108420-57108439 Msa0030710:intron 30.0%
TAAGTCACATCATTGATAGA+AGG - chr1_1:57108594-57108613 None:intergenic 30.0%
!! AATCTTTTAATTGCCAACTC+TGG + chr1_1:57108758-57108777 Msa0030710:CDS 30.0%
! TTTGCTATATTAGGAAGTTC+TGG + chr1_1:57108821-57108840 Msa0030710:intron 30.0%
TATGATGATTACTTTCTTGC+AGG + chr1_1:57108887-57108906 Msa0030710:intron 30.0%
!!! GTAGATCTTGTCATTTTAGA+AGG + chr1_1:57108960-57108979 Msa0030710:CDS 30.0%
TTTGTAGAAAGGGGAAAAAA+GGG - chr1_1:57109063-57109082 None:intergenic 30.0%
AGCCTTAAAAGAAACTAGAA+AGG + chr1_1:57109299-57109318 Msa0030710:intron 30.0%
! TCTCCAATTTTTCCTTCAAT+AGG + chr1_1:57109389-57109408 Msa0030710:intron 30.0%
ACACCTATTGAAGGAAAAAT+TGG - chr1_1:57109395-57109414 None:intergenic 30.0%
TGATTCTATGAAGATTGCAA+TGG + chr1_1:57109528-57109547 Msa0030710:CDS 30.0%
! TTAAGCCTGATTCTTTTACA+AGG + chr1_1:57109731-57109750 Msa0030710:intron 30.0%
! TTTTGCCTTGTAAAAGAATC+AGG - chr1_1:57109739-57109758 None:intergenic 30.0%
CTCAAATAGTTAATTCTCAG+AGG - chr1_1:57109842-57109861 None:intergenic 30.0%
! CTCTGAGAATTAACTATTTG+AGG + chr1_1:57109840-57109859 Msa0030710:intron 30.0%
AAAATCTCGGATTTATAGTC+TGG - chr1_1:57110022-57110041 None:intergenic 30.0%
AAATTGGGAGACTAAAATCT+CGG - chr1_1:57110035-57110054 None:intergenic 30.0%
AAAATGAGCCAAAACTGAAA+AGG + chr1_1:57110158-57110177 Msa0030710:intron 30.0%
ATTGTTCGCAAATCATCATT+TGG + chr1_1:57110200-57110219 Msa0030710:intron 30.0%
ATTCCGTATTAGAAAATCTG+AGG + chr1_1:57110413-57110432 Msa0030710:intron 30.0%
CAACTCAAGCATTATTTGAT+TGG - chr1_1:57110623-57110642 None:intergenic 30.0%
GTTTAGTGTTAGATGTTAGT+TGG + chr1_1:57110726-57110745 Msa0030710:intron 30.0%
ATCCCACTTATTCATCTTTA+AGG + chr1_1:57110936-57110955 Msa0030710:intron 30.0%
CACCTTAAAGATGAATAAGT+GGG - chr1_1:57110941-57110960 None:intergenic 30.0%
TCACCTTAAAGATGAATAAG+TGG - chr1_1:57110942-57110961 None:intergenic 30.0%
! CATTTTCAAAGTACAATTGC+AGG + chr1_1:57111316-57111335 Msa0030710:intron 30.0%
!!! CATTTTAAGGTGTGTGTATA+TGG + chr1_1:57111410-57111429 Msa0030710:intron 30.0%
AAATGGTAGACTAACACATT+CGG - chr1_1:57111469-57111488 None:intergenic 30.0%
!! GTTAGTCTACCATTTGTTTT+AGG + chr1_1:57111474-57111493 Msa0030710:intron 30.0%
! CTTGTTCATTTCTTTGTTTG+AGG - chr1_1:57111517-57111536 None:intergenic 30.0%
GCCTCTAATGAGATAAAATT+AGG + chr1_1:57111552-57111571 Msa0030710:intron 30.0%
! CCCTAATTTTATCTCATTAG+AGG - chr1_1:57111556-57111575 None:intergenic 30.0%
TATTCAAACCAACTCTTGAT+GGG - chr1_1:57111604-57111623 None:intergenic 30.0%
! TATTTCTACACTCTTCTTCA+TGG - chr1_1:57111815-57111834 None:intergenic 30.0%
! GAAGAAGAGTGTAGAAATAA+TGG + chr1_1:57111816-57111835 Msa0030710:intron 30.0%
ATCTAATGCATTATGCATGT+GGG - chr1_1:57111850-57111869 None:intergenic 30.0%
TATCTAATGCATTATGCATG+TGG - chr1_1:57111851-57111870 None:intergenic 30.0%
ATAGATAGACCTAACTTCTA+AGG + chr1_1:57111907-57111926 Msa0030710:intron 30.0%
! GAAAATGGGAAGTTTTTGTT+TGG - chr1_1:57111943-57111962 None:intergenic 30.0%
! ATCTAGTTTCTCAATGTTGA+TGG - chr1_1:57112018-57112037 None:intergenic 30.0%
TCAACATTGAGAAACTAGAT+AGG + chr1_1:57112018-57112037 Msa0030710:intron 30.0%
GAGAAACTAGATAGGTATTA+AGG + chr1_1:57112026-57112045 Msa0030710:intron 30.0%
TGTCTCTATTAAAATGAAGC+TGG - chr1_1:57112261-57112280 None:intergenic 30.0%
! AATGATGATGATGATGATGA+GGG - chr1_1:57105505-57105524 None:intergenic 30.0%
! AAATGATGATGATGATGATG+AGG - chr1_1:57105506-57105525 None:intergenic 30.0%
TTGATGAATGCAATGTTGTT+GGG - chr1_1:57112429-57112448 None:intergenic 30.0%
ATTGATGAATGCAATGTTGT+TGG - chr1_1:57112430-57112449 None:intergenic 30.0%
GAAAGAAAAATCAATGTTGG+TGG + chr1_1:57112775-57112794 Msa0030710:intron 30.0%
!!! CATTGATTTTGCATGATTGA+AGG + chr1_1:57112812-57112831 Msa0030710:intron 30.0%
GTATGAATGATCATAACCTT+TGG + chr1_1:57113019-57113038 Msa0030710:intron 30.0%
!! AACATTGATTCAAGTCAAAG+GGG + chr1_1:57113065-57113084 Msa0030710:intron 30.0%
CACTATAAATACTTGGCATT+TGG + chr1_1:57113119-57113138 Msa0030710:intron 30.0%
CATCCAATTATAGTTATTGG+TGG + chr1_1:57113367-57113386 Msa0030710:intron 30.0%
TCCAATTATAGTTATTGGTG+GGG + chr1_1:57113369-57113388 Msa0030710:intron 30.0%
ATTCATCTTCATCATCTTCT+TGG + chr1_1:57113543-57113562 Msa0030710:intron 30.0%
AAATCGAACCTAAAGATTGT+TGG - chr1_1:57113602-57113621 None:intergenic 30.0%
! CTTATTAATGGCTGCAATTT+TGG + chr1_1:57113630-57113649 Msa0030710:intron 30.0%
TAATCCCATCTTATGAAGTT+TGG + chr1_1:57114478-57114497 Msa0030710:intron 30.0%
CATAACCAAACTTCATAAGA+TGG - chr1_1:57114486-57114505 None:intergenic 30.0%
TATTCTCATAGCTATGTCTA+TGG - chr1_1:57114748-57114767 None:intergenic 30.0%
ATTTGACGAAATGATTGACA+AGG + chr1_1:57114831-57114850 Msa0030710:intron 30.0%
ATCTAATTGATTACCAATGG+TGG + chr1_1:57114920-57114939 Msa0030710:intron 30.0%
TTGGACCATAAGAAGAAAAA+GGG + chr1_1:57115054-57115073 Msa0030710:intron 30.0%
TATGCTATATGTCCATTAAG+AGG - chr1_1:57115094-57115113 None:intergenic 30.0%
GACATATAGCATATATTTGC+TGG + chr1_1:57115101-57115120 Msa0030710:intron 30.0%
TGTAAGATGACACATTAAGA+AGG - chr1_1:57115248-57115267 None:intergenic 30.0%
CTTACAAGTCTCTTTATCAA+TGG + chr1_1:57115262-57115281 Msa0030710:intron 30.0%
CACTTGTTCTAATGAATAGT+TGG + chr1_1:57115313-57115332 Msa0030710:intron 30.0%
GTATGAATGATCATAACCTT+TGG + chr1_1:57113019-57113038 Msa0030710:intron 30.0%
!! AACATTGATTCAAGTCAAAG+GGG + chr1_1:57113065-57113084 Msa0030710:intron 30.0%
CACTATAAATACTTGGCATT+TGG + chr1_1:57113119-57113138 Msa0030710:intron 30.0%
ATGTACACGTGAGTATATAT+AGG + chr1_1:57115998-57116017 Msa0030710:intron 30.0%
CAAAGAGATTCAAGATGATT+TGG - chr1_1:57116505-57116524 None:intergenic 30.0%
TCATCTTCTTTGTAGTATTG+AGG - chr1_1:57116624-57116643 None:intergenic 30.0%
TAGACATGTAAACTAATGCA+AGG + chr1_1:57116654-57116673 Msa0030710:intron 30.0%
TAAACTAATGCAAGGAATGA+AGG + chr1_1:57116662-57116681 Msa0030710:intron 30.0%
TTGATGTCTCAATGAATCTA+GGG + chr1_1:57116712-57116731 Msa0030710:intron 30.0%
AAACACAAAGCAAGTGATTA+AGG - chr1_1:57116749-57116768 None:intergenic 30.0%
! TGTATTTTCCTGCACAAAAA+AGG + chr1_1:57117283-57117302 Msa0030710:intron 30.0%
!! TTGTTTTGCAAGATTCTCTA+TGG - chr1_1:57117362-57117381 None:intergenic 30.0%
CATCCAATTATAGTTATTGG+TGG + chr1_1:57113367-57113386 Msa0030710:intron 30.0%
TCCAATTATAGTTATTGGTG+GGG + chr1_1:57113369-57113388 Msa0030710:intron 30.0%
ATTCATCTTCATCATCTTCT+TGG + chr1_1:57113543-57113562 Msa0030710:intron 30.0%
TTAGCCTAAAATGTTTAAGG+TGG - chr1_1:57117794-57117813 None:intergenic 30.0%
! TATGTTTTCGTCAACCAATT+TGG - chr1_1:57117832-57117851 None:intergenic 30.0%
GAAACTTAGAAATTGTTGAG+GGG + chr1_1:57117897-57117916 Msa0030710:intron 30.0%
TTGGATCCCTAAAAATAACT+AGG - chr1_1:57117940-57117959 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_1:57117997-57118016 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr1_1:57117998-57118017 Msa0030710:intron 30.0%
!!! AAGAGTTTTGGTGTTCTATT+CGG - chr1_1:57118523-57118542 None:intergenic 30.0%
! TTCAGAATTGATTCTGAACT+TGG - chr1_1:57118681-57118700 None:intergenic 30.0%
AAGTTCAGAATCAATTCTGA+AGG + chr1_1:57118680-57118699 Msa0030710:intron 30.0%
! TTTGGTTTCACATTTAGAAG+AGG - chr1_1:57118775-57118794 None:intergenic 30.0%
TTTATCAGAAGAAGAAGCAA+TGG + chr1_1:57118902-57118921 Msa0030710:intron 30.0%
TTAATCCAAGATAACTCAGT+GGG - chr1_1:57119047-57119066 None:intergenic 30.0%
ATTAATCCAAGATAACTCAG+TGG - chr1_1:57119048-57119067 None:intergenic 30.0%
!! TTTTGAGAGAACATACTTGT+AGG - chr1_1:57119093-57119112 None:intergenic 30.0%
GTTCTCTCAAAACAAAATTG+GGG + chr1_1:57119101-57119120 Msa0030710:intron 30.0%
!!! TTTTAGCTTTGATTTGGTAC+AGG + chr1_1:57119181-57119200 Msa0030710:intron 30.0%
GAAATTTATGCTCAAAGGTT+AGG + chr1_1:57119252-57119271 Msa0030710:intron 30.0%
GTGGTCTCTTATTATTTCAT+TGG + chr1_1:57119274-57119293 Msa0030710:intron 30.0%
CTGATGTTCATAGAAACATT+AGG - chr1_1:57119309-57119328 None:intergenic 30.0%
! CTAATGTTTCTATGAACATC+AGG + chr1_1:57119307-57119326 Msa0030710:intron 30.0%
AATGAGGTAAAACACATAAG+GGG - chr1_1:57119562-57119581 None:intergenic 30.0%
!!! CTTTGTTGTTTTTGTGGTTT+TGG - chr1_1:57119926-57119945 None:intergenic 30.0%
CAAAACCACAAAAACAACAA+AGG + chr1_1:57119924-57119943 Msa0030710:intron 30.0%
AGGACAATTGTAATTGTTGT+TGG - chr1_1:57119975-57119994 None:intergenic 30.0%
CAAAATATGACAAGTCATAG+AGG - chr1_1:57119995-57120014 None:intergenic 30.0%
!! CTCTATGACTTGTCATATTT+TGG + chr1_1:57119993-57120012 Msa0030710:intron 30.0%
ACTCATGAGTAGTGTTTATA+GGG - chr1_1:57120239-57120258 None:intergenic 30.0%
TACTCATGAGTAGTGTTTAT+AGG - chr1_1:57120240-57120259 None:intergenic 30.0%
GGGTTTGATAAGTGATTATT+TGG - chr1_1:57120365-57120384 None:intergenic 30.0%
GAGGAAGACAGAAAAAAATA+AGG + chr1_1:57120536-57120555 Msa0030710:intron 30.0%
!!! ATGTGGTTGATTTTTTGATG+TGG + chr1_1:57120623-57120642 Msa0030710:intron 30.0%
AAGAATGGTATGTGTATATC+TGG + chr1_1:57121049-57121068 Msa0030710:intron 30.0%
ATGTGTATATCTGGTTATTG+AGG + chr1_1:57121058-57121077 Msa0030710:intron 30.0%
TAACATCTTACAGCAAGAAT+AGG + chr1_1:57121092-57121111 Msa0030710:intron 30.0%
CCTATCTTAATGAGATTGAT+AGG - chr1_1:57121183-57121202 None:intergenic 30.0%
CCTATCAATCTCATTAAGAT+AGG + chr1_1:57121180-57121199 Msa0030710:intron 30.0%
AATCTCATTAAGATAGGAGA+TGG + chr1_1:57121186-57121205 Msa0030710:intron 30.0%
ACGAACAACTTTCTCAAATA+GGG - chr1_1:57121303-57121322 None:intergenic 30.0%
! TTAGTTAGAGGAATTTTTGC+GGG + chr1_1:57107430-57107449 Msa0030710:CDS 30.0%
GAAAAAAATCAAACTACCTG+GGG - chr1_1:57121413-57121432 None:intergenic 30.0%
CGAAAAAAATCAAACTACCT+GGG - chr1_1:57121414-57121433 None:intergenic 30.0%
ACGAAAAAAATCAAACTACC+TGG - chr1_1:57121415-57121434 None:intergenic 30.0%
ATTCTCACAAAATGAGAATG+AGG + chr1_1:57121508-57121527 Msa0030710:intron 30.0%
AACAAATTGAGGGAAGAAAA+AGG - chr1_1:57121689-57121708 None:intergenic 30.0%
!! ATCAATTTCTTTTTCATGGC+AGG + chr1_1:57121910-57121929 Msa0030710:intron 30.0%
! TCTGGTGCAGATATTATTTT+AGG + chr1_1:57121953-57121972 Msa0030710:CDS 30.0%
! TTCAACCATGTTTTCTTATC+TGG + chr1_1:57122045-57122064 Msa0030710:intron 30.0%
AACTTCCAGATAAGAAAACA+TGG - chr1_1:57122053-57122072 None:intergenic 30.0%
TAAGTCACATCATTGATAGA+AGG - chr1_1:57108594-57108613 None:intergenic 30.0%
!!! TTCTTTGTTGTTTTGTTCCT+TGG + chr1_1:57122481-57122500 Msa0030710:intron 30.0%
!!! GTAGATCTTGTCATTTTAGA+AGG + chr1_1:57108960-57108979 Msa0030710:CDS 30.0%
!!! TCTTGTCATTTTAGAAGGAA+TGG + chr1_1:57122562-57122581 Msa0030710:intron 30.0%
AGAAAAAACATGCAATGTCA+AGG - chr1_1:57122600-57122619 None:intergenic 30.0%
!!! ACATTGCATGTTTTTTCTCT+TGG + chr1_1:57122602-57122621 Msa0030710:intron 30.0%
!!! CATTGCATGTTTTTTCTCTT+GGG + chr1_1:57122603-57122622 Msa0030710:intron 30.0%
!!! ATTGCATGTTTTTTCTCTTG+GGG + chr1_1:57122604-57122623 Msa0030710:intron 30.0%
TGTTAAATGAGCGTGTTAAA+AGG + chr1_1:57122695-57122714 Msa0030710:intron 30.0%
TATATCCAAATCCAACGATT+TGG + chr1_1:57122741-57122760 Msa0030710:intron 30.0%
ATATCCAAATCCAACGATTT+GGG + chr1_1:57122742-57122761 Msa0030710:intron 30.0%
! GAGGTTGATTGAAGTTATAT+TGG - chr1_1:57122788-57122807 None:intergenic 30.0%
!! GACAACTAAAAAGGTATCAA+GGG + chr1_1:57123272-57123291 Msa0030710:intron 30.0%
!! ATTGAGATTCGGTGATTATA+AGG + chr1_1:57123339-57123358 Msa0030710:intron 30.0%
ACAATGAGAACTCAACAATA+TGG - chr1_1:57123493-57123512 None:intergenic 30.0%
CTGACACATTTATTATGACA+GGG + chr1_1:57123595-57123614 Msa0030710:intron 30.0%
TGATTCTATGAAGATTGCAA+TGG + chr1_1:57109528-57109547 Msa0030710:CDS 30.0%
AAATACGAGAAATTGGATAC+TGG + chr1_1:57123714-57123733 Msa0030710:intron 30.0%
!!! TGTTGTCGTTTTTCTTTTAC+AGG + chr1_1:57123766-57123785 Msa0030710:intron 30.0%
! CTTTTACAGGTGAAAAATAC+CGG + chr1_1:57123779-57123798 Msa0030710:intron 30.0%
! ATTTTTCTCTGCCTGATAAT+TGG + chr1_1:57123987-57124006 Msa0030710:CDS 30.0%
! AGACTTGTAGCTATATGTTT+TGG + chr1_1:57124029-57124048 Msa0030710:exon 30.0%
! GACTTGTAGCTATATGTTTT+GGG + chr1_1:57124030-57124049 Msa0030710:exon 30.0%
AGGCCAAAAATCAAATGTAG+AGG + chr1_1:57105923-57105942 Msa0030710:intron 35.0%
GTCACATGAAAAGTGACAAT+TGG + chr1_1:57106131-57106150 Msa0030710:intron 35.0%
GGTGAGATTTCCTTTATTGA+TGG + chr1_1:57106287-57106306 Msa0030710:CDS 35.0%
ATTTATCCAAGATAACTCGG+TGG - chr1_1:57106391-57106410 None:intergenic 35.0%
! ATTTTTGCTCAAAGGTTAGG+TGG + chr1_1:57106589-57106608 Msa0030710:intron 35.0%
CCTCTCAAAGTAAACGAAAA+GGG - chr1_1:57106635-57106654 None:intergenic 35.0%
ACCTCTCAAAGTAAACGAAA+AGG - chr1_1:57106636-57106655 None:intergenic 35.0%
! ACCTGTTTCTCATAAACATC+AGG + chr1_1:57106674-57106693 Msa0030710:intron 35.0%
GAACATACAAGGATATCAAG+AGG - chr1_1:57106834-57106853 None:intergenic 35.0%
GTCCAGATAAAGAACATACA+AGG - chr1_1:57106845-57106864 None:intergenic 35.0%
AATAAGGGATAACACAGAAG+GGG - chr1_1:57106925-57106944 None:intergenic 35.0%
GAATAAGGGATAACACAGAA+GGG - chr1_1:57106926-57106945 None:intergenic 35.0%
AGAATAAGGGATAACACAGA+AGG - chr1_1:57106927-57106946 None:intergenic 35.0%
TGAGGAAGTTCTTAAAGAAC+TGG + chr1_1:57106990-57107009 Msa0030710:CDS 35.0%
GAGGAAGTTCTTAAAGAACT+GGG + chr1_1:57106991-57107010 Msa0030710:CDS 35.0%
AGGAAGTTCTTAAAGAACTG+GGG + chr1_1:57106992-57107011 Msa0030710:CDS 35.0%
CTGTGTATATCTGGTTATTG+AGG + chr1_1:57107117-57107136 Msa0030710:intron 35.0%
CATCTTGCAGAAAGAATATG+GGG + chr1_1:57107154-57107173 Msa0030710:intron 35.0%
AATGTCATTAAGATAGGGGA+TGG + chr1_1:57107240-57107259 Msa0030710:intron 35.0%
CGACTTGAGAATTTAGTTAG+AGG + chr1_1:57107418-57107437 Msa0030710:CDS 35.0%
AGAGAAAATCAAACTACCTG+GGG - chr1_1:57107478-57107497 None:intergenic 35.0%
AATCATATGCCAATGTTTGG+AGG + chr1_1:57107721-57107740 Msa0030710:intron 35.0%
TGCAAGCTTCAAGAAATTGA+GGG - chr1_1:57107789-57107808 None:intergenic 35.0%
TTATGTCTTCTGACGAATCT+TGG + chr1_1:57107976-57107995 Msa0030710:intron 35.0%
! TCGGGTGCAGATATAATTTT+AGG + chr1_1:57108059-57108078 Msa0030710:intron 35.0%
!! TAGGTATTTTGCCATTTGCA+AGG + chr1_1:57108078-57108097 Msa0030710:CDS 35.0%
!! AGGTATTTTGCCATTTGCAA+GGG + chr1_1:57108079-57108098 Msa0030710:CDS 35.0%
!!! GCAATTTTGTGTTTTAGCAG+TGG + chr1_1:57108313-57108332 Msa0030710:intron 35.0%
!!! ATTTTGTGTTTTAGCAGTGG+GGG + chr1_1:57108316-57108335 Msa0030710:intron 35.0%
ACAATAGATCAATGTGTTGC+AGG + chr1_1:57108379-57108398 Msa0030710:intron 35.0%
GCAATCAACATGAAAGAGTT+AGG - chr1_1:57108693-57108712 None:intergenic 35.0%
! TCATGTTGATTGCCAGTTAA+AGG + chr1_1:57108700-57108719 Msa0030710:intron 35.0%
AGGTAAATCATTTCCAGAGT+TGG - chr1_1:57108774-57108793 None:intergenic 35.0%
AGTCAACTATTTGACAGCAT+CGG - chr1_1:57108865-57108884 None:intergenic 35.0%
GCAGGTTATTGATCTTACAA+AGG + chr1_1:57108905-57108924 Msa0030710:intron 35.0%
AAGATCTACATCACTGGTAA+GGG - chr1_1:57108949-57108968 None:intergenic 35.0%
AATGACAAGATCTACATCAC+TGG - chr1_1:57108955-57108974 None:intergenic 35.0%
!!! TCTTGTCATTTTAGAAGGGA+TGG + chr1_1:57108965-57108984 Msa0030710:CDS 35.0%
CTTTGTAGAAAGGGGAAAAA+AGG - chr1_1:57109064-57109083 None:intergenic 35.0%
! ACTTCTGAGAGAGAAATATG+TGG + chr1_1:57109184-57109203 Msa0030710:intron 35.0%
AAGAAACTAGAAAGGAACAG+AGG + chr1_1:57109307-57109326 Msa0030710:intron 35.0%
AGAAACTAGAAAGGAACAGA+GGG + chr1_1:57109308-57109327 Msa0030710:intron 35.0%
!! TTGTCAGAAATTGGTCTTTG+AGG + chr1_1:57109435-57109454 Msa0030710:intron 35.0%
TTGCAGAATTTCTTGAGTCA+CGG + chr1_1:57109663-57109682 Msa0030710:CDS 35.0%
GAGGGATCAAAAACCTTAAT+TGG - chr1_1:57110000-57110019 None:intergenic 35.0%
CGTGTCACATCATCAAATTT+CGG + chr1_1:57110306-57110325 Msa0030710:intron 35.0%
! CTATAAGTAGAGTCCTTTTC+AGG - chr1_1:57110600-57110619 None:intergenic 35.0%
GCTGTCAAAATTAACTTACC+AGG + chr1_1:57110667-57110686 Msa0030710:intron 35.0%
CATCACTAGAGATACATCAT+GGG - chr1_1:57110782-57110801 None:intergenic 35.0%
ACATCACTAGAGATACATCA+TGG - chr1_1:57110783-57110802 None:intergenic 35.0%
GTATTCAAACCAACTCTTGA+TGG - chr1_1:57111605-57111624 None:intergenic 35.0%
AAAGATGAGACAAAGTGTGT+GGG - chr1_1:57111705-57111724 None:intergenic 35.0%
! CTTTGTCTCATCTTTGTTGT+TGG + chr1_1:57111710-57111729 Msa0030710:intron 35.0%
! TTCAAAGAGCACAACTTCTT+TGG + chr1_1:57111756-57111775 Msa0030710:intron 35.0%
ATGGCATTCATTAGGTTCTT+GGG - chr1_1:57111796-57111815 None:intergenic 35.0%
TCTTCTTCATGGCATTCATT+AGG - chr1_1:57111804-57111823 None:intergenic 35.0%
TCTAATGCATTATGCATGTG+GGG - chr1_1:57111849-57111868 None:intergenic 35.0%
GGTCTATCTATAGACTATAG+AGG - chr1_1:57111898-57111917 None:intergenic 35.0%
TGTAGTTCACTTGGAAAAGA+CGG - chr1_1:57111990-57112009 None:intergenic 35.0%
! TAGTTTCTCAATGTTGATGG+AGG - chr1_1:57112015-57112034 None:intergenic 35.0%
GCACAAACACTCTTTGAATT+AGG + chr1_1:57112121-57112140 Msa0030710:intron 35.0%
!! GTAATTATATGTGTCGGTTG+TGG - chr1_1:57112157-57112176 None:intergenic 35.0%
ATGAGGGAATATAACTCCAA+TGG - chr1_1:57112334-57112353 None:intergenic 35.0%
TAGTGTTTGGGAATGATGAT+TGG - chr1_1:57112462-57112481 None:intergenic 35.0%
AATCATCATTCCCAAACACT+AGG + chr1_1:57112461-57112480 Msa0030710:CDS 35.0%
ATAAGGGATACCTAGTGTTT+GGG - chr1_1:57112474-57112493 None:intergenic 35.0%
TATAAGGGATACCTAGTGTT+TGG - chr1_1:57112475-57112494 None:intergenic 35.0%
! GAAGGATGATGATGAAGAAA+AGG + chr1_1:57112753-57112772 Msa0030710:intron 35.0%
CTCATGAAGATTTACAACTC+TGG - chr1_1:57112876-57112895 None:intergenic 35.0%
TACATTAGAACCTTTGGCAA+AGG + chr1_1:57112907-57112926 Msa0030710:intron 35.0%
ACATTAGAACCTTTGGCAAA+GGG + chr1_1:57112908-57112927 Msa0030710:intron 35.0%
TGCTTAATGAACCTTAGCAT+TGG + chr1_1:57112932-57112951 Msa0030710:intron 35.0%
GTGTGAATGATCATAACCTT+TGG + chr1_1:57112960-57112979 Msa0030710:intron 35.0%
GATCATAACCTTTGGCAAAA+TGG + chr1_1:57112968-57112987 Msa0030710:intron 35.0%
! ATTAAGCACCATTTTGCCAA+AGG - chr1_1:57112979-57112998 None:intergenic 35.0%
TGCTTAATGAACCATAGCAT+TGG + chr1_1:57112991-57113010 Msa0030710:intron 35.0%
TCATACTTGAACCAATGCTA+TGG - chr1_1:57113005-57113024 None:intergenic 35.0%
GATCATAACCTTTGGCAAAA+TGG + chr1_1:57112968-57112987 Msa0030710:intron 35.0%
! ATTAAGCACCATTTTGCCAA+AGG - chr1_1:57112979-57112998 None:intergenic 35.0%
CTCATGCATTAGAGAATTGA+TGG - chr1_1:57113227-57113246 None:intergenic 35.0%
CCAATTATAGTTATTGGTGG+GGG + chr1_1:57113370-57113389 Msa0030710:intron 35.0%
ATGTAAACTCAAAGCGTATG+GGG - chr1_1:57113425-57113444 None:intergenic 35.0%
CATGTAAACTCAAAGCGTAT+GGG - chr1_1:57113426-57113445 None:intergenic 35.0%
ATATCTTGATTGTTGGGAAG+AGG - chr1_1:57113486-57113505 None:intergenic 35.0%
AGATTGTTGGATCTTGTGTT+GGG - chr1_1:57113589-57113608 None:intergenic 35.0%
AAGATTGTTGGATCTTGTGT+TGG - chr1_1:57113590-57113609 None:intergenic 35.0%
CACAAGATCCAACAATCTTT+AGG + chr1_1:57113591-57113610 Msa0030710:intron 35.0%
! CAATTGACAAAAGTGTGTCA+TGG + chr1_1:57114678-57114697 Msa0030710:intron 35.0%
! TGTCATGGTTTGATGATAGT+TGG + chr1_1:57114693-57114712 Msa0030710:intron 35.0%
TTGACAAGGAATGATGTCTT+TGG + chr1_1:57114845-57114864 Msa0030710:intron 35.0%
TGAAGACATTATTAGGGATG+TGG + chr1_1:57114886-57114905 Msa0030710:intron 35.0%
TGACAATAGATAACATCCCA+AGG + chr1_1:57115020-57115039 Msa0030710:intron 35.0%
GACAATAGATAACATCCCAA+GGG + chr1_1:57115021-57115040 Msa0030710:intron 35.0%
ACAATAGATAACATCCCAAG+GGG + chr1_1:57115022-57115041 Msa0030710:intron 35.0%
CTTGGACCATAAGAAGAAAA+AGG + chr1_1:57115053-57115072 Msa0030710:intron 35.0%
ACCATAAGAAGAAAAAGGGT+AGG + chr1_1:57115058-57115077 Msa0030710:intron 35.0%
! TCCTACCCTTTTTCTTCTTA+TGG - chr1_1:57115062-57115081 None:intergenic 35.0%
TTTGCTGGAATGCATACTTA+TGG + chr1_1:57115116-57115135 Msa0030710:intron 35.0%
TTGCTGGAATGCATACTTAT+GGG + chr1_1:57115117-57115136 Msa0030710:intron 35.0%
CTCACATAGGTAGACTATAT+CGG - chr1_1:57115149-57115168 None:intergenic 35.0%
ACCTATGTGAGAATGAAGTT+TGG + chr1_1:57115158-57115177 Msa0030710:intron 35.0%
GAAAAGGGATATATGACACA+AGG + chr1_1:57115222-57115241 Msa0030710:intron 35.0%
AATTCCATGCCTTCAGATAA+TGG - chr1_1:57115416-57115435 None:intergenic 35.0%
TACATTAGAACCTTTGGCAA+AGG + chr1_1:57112907-57112926 Msa0030710:intron 35.0%
ACATTAGAACCTTTGGCAAA+GGG + chr1_1:57112908-57112927 Msa0030710:intron 35.0%
TGCTTAATGAACCTTAGCAT+TGG + chr1_1:57112932-57112951 Msa0030710:intron 35.0%
GTGTGAATGATCATAACCTT+TGG + chr1_1:57112960-57112979 Msa0030710:intron 35.0%
GATCATAACCTTTGGCAAAA+TGG + chr1_1:57112968-57112987 Msa0030710:intron 35.0%
! ATTAAGCACCATTTTGCCAA+AGG - chr1_1:57112979-57112998 None:intergenic 35.0%
TGCTTAATGAACCATAGCAT+TGG + chr1_1:57112991-57113010 Msa0030710:intron 35.0%
TCATACTTGAACCAATGCTA+TGG - chr1_1:57113005-57113024 None:intergenic 35.0%
GATCATAACCTTTGGCAAAA+TGG + chr1_1:57112968-57112987 Msa0030710:intron 35.0%
! ATTAAGCACCATTTTGCCAA+AGG - chr1_1:57112979-57112998 None:intergenic 35.0%
TTGGCATTTGGGCATTAATT+TGG + chr1_1:57113131-57113150 Msa0030710:intron 35.0%
CTCATGCATTAGAGAATTGA+TGG - chr1_1:57113227-57113246 None:intergenic 35.0%
! ATATAGGATCGTTTTCCACA+AGG + chr1_1:57116014-57116033 Msa0030710:intron 35.0%
TGACATAAACGTAAAACGAG+AGG + chr1_1:57116123-57116142 Msa0030710:intron 35.0%
GACATAAACGTAAAACGAGA+GGG + chr1_1:57116124-57116143 Msa0030710:intron 35.0%
ACATAAACGTAAAACGAGAG+GGG + chr1_1:57116125-57116144 Msa0030710:intron 35.0%
ATGCTTTCGGATACTTAATC+AGG - chr1_1:57116379-57116398 None:intergenic 35.0%
CTAGATTCATTGAGACATCA+AGG - chr1_1:57116713-57116732 None:intergenic 35.0%
CTTGATGTCTCAATGAATCT+AGG + chr1_1:57116711-57116730 Msa0030710:intron 35.0%
TAGTGAATGACCTAAAAGAG+AGG + chr1_1:57116826-57116845 Msa0030710:intron 35.0%
! AGCATTCTTACCTCTCTTTT+AGG - chr1_1:57116839-57116858 None:intergenic 35.0%
! ATTTTCCTGCACAAAAAAGG+TGG + chr1_1:57117286-57117305 Msa0030710:intron 35.0%
!!! TTATTCCACCTTTTTTGTGC+AGG - chr1_1:57117294-57117313 None:intergenic 35.0%
TGCACAAAAAAGGTGGAATA+AGG + chr1_1:57117293-57117312 Msa0030710:intron 35.0%
CCAATTATAGTTATTGGTGG+GGG + chr1_1:57113370-57113389 Msa0030710:intron 35.0%
ATCGAACCTAAAGGTTAGTA+TGG + chr1_1:57113396-57113415 Msa0030710:intron 35.0%
ATGTAAACTCAAAGCGTATG+GGG - chr1_1:57113425-57113444 None:intergenic 35.0%
CATGTAAACTCAAAGCGTAT+GGG - chr1_1:57113426-57113445 None:intergenic 35.0%
ATATCTTGATTGTTGGGAAG+AGG - chr1_1:57113486-57113505 None:intergenic 35.0%
AAACAAAACCAACCCTTTGT+TGG - chr1_1:57117718-57117737 None:intergenic 35.0%
! TGGTCCACCTTAAACATTTT+AGG + chr1_1:57117787-57117806 Msa0030710:intron 35.0%
!! ATTAACATAGCGGACCAAAT+TGG + chr1_1:57117815-57117834 Msa0030710:intron 35.0%
ACATATTTGAGCGACCAAAA+CGG + chr1_1:57117847-57117866 Msa0030710:intron 35.0%
AACTAGGCTTAATTGGCATT+TGG - chr1_1:57117924-57117943 None:intergenic 35.0%
! ATGGTACTAACTAGCTTGAT+TGG - chr1_1:57117959-57117978 None:intergenic 35.0%
GTAGTGTGCTGAGTATTAAT+TGG + chr1_1:57118128-57118147 Msa0030710:intron 35.0%
TGTGCTGAGTATTAATTGGA+GGG + chr1_1:57118132-57118151 Msa0030710:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr1_1:57118215-57118234 Msa0030710:intron 35.0%
! GCTGCATAATCAAAGAGTTT+TGG - chr1_1:57118535-57118554 None:intergenic 35.0%
TGCATGAGTGAATTACATTG+TGG + chr1_1:57118862-57118881 Msa0030710:intron 35.0%
CAGTATCATCCATCAACAAA+GGG - chr1_1:57118956-57118975 None:intergenic 35.0%
TCAGTATCATCCATCAACAA+AGG - chr1_1:57118957-57118976 None:intergenic 35.0%
AATGGTGCATGCTGAATAAT+TGG - chr1_1:57118985-57119004 None:intergenic 35.0%
! TGGATTAATCTCTTTTGCAG+TGG + chr1_1:57119059-57119078 Msa0030710:CDS 35.0%
AAGCCGAAATTTATGCTCAA+AGG + chr1_1:57119247-57119266 Msa0030710:CDS 35.0%
ATTTATGCTCAAAGGTTAGG+TGG + chr1_1:57119255-57119274 Msa0030710:intron 35.0%
GAACATACAAGGATATCAAG+AGG - chr1_1:57106834-57106853 None:intergenic 35.0%
GTTCAGGTAAAGAACATACA+AGG - chr1_1:57119483-57119502 None:intergenic 35.0%
! CACTTTTGCATATGAAGTTC+AGG - chr1_1:57119499-57119518 None:intergenic 35.0%
AGGAACTCCTTAAAGAACTA+GGG + chr1_1:57119631-57119650 Msa0030710:intron 35.0%
! CTCTAAACCCTAGTTCTTTA+AGG - chr1_1:57119641-57119660 None:intergenic 35.0%
!!! TTTTTGTGGTTTTGGAGCTT+AGG - chr1_1:57119918-57119937 None:intergenic 35.0%
! TGTAATTGTTGTTGGCAGTT+GGG - chr1_1:57119967-57119986 None:intergenic 35.0%
! TTGTAATTGTTGTTGGCAGT+TGG - chr1_1:57119968-57119987 None:intergenic 35.0%
!!! TTTTTTCTGTCTTCCTCCAT+TGG - chr1_1:57120533-57120552 None:intergenic 35.0%
GATTAGAGACACAAGAAACA+AGG + chr1_1:57120567-57120586 Msa0030710:intron 35.0%
TTAAAACAAGGATGTGGATG+TGG + chr1_1:57120606-57120625 Msa0030710:intron 35.0%
TCAGAATTGTGTTAGCCAAT+TGG + chr1_1:57120756-57120775 Msa0030710:intron 35.0%
CAGAATTGTGTTAGCCAATT+GGG + chr1_1:57120757-57120776 Msa0030710:intron 35.0%
! ATTACTAAAGCAATAGTGGG+TGG + chr1_1:57120840-57120859 Msa0030710:intron 35.0%
!! TTACTAAAGCAATAGTGGGT+GGG + chr1_1:57120841-57120860 Msa0030710:intron 35.0%
TCGAAGATATCTCTAAACCA+GGG - chr1_1:57120959-57120978 None:intergenic 35.0%
AGATATCTTCGAGAAAGTCA+AGG + chr1_1:57120967-57120986 Msa0030710:intron 35.0%
AATGCTATTCCGCTAAAATG+TGG + chr1_1:57121026-57121045 Msa0030710:intron 35.0%
! ACCATTCTTCCACATTTTAG+CGG - chr1_1:57121038-57121057 None:intergenic 35.0%
ACAGAATGAAGAGAATGCAA+AGG + chr1_1:57121271-57121290 Msa0030710:intron 35.0%
AACTTTCTCAAATAGGGAGA+TGG - chr1_1:57121297-57121316 None:intergenic 35.0%
GACGAACAACTTTCTCAAAT+AGG - chr1_1:57121304-57121323 None:intergenic 35.0%
CGACTTGAGAATTTAGTTAG+AGG + chr1_1:57107418-57107437 Msa0030710:CDS 35.0%
! TAGTTAGAGGAATTTTTGCG+GGG + chr1_1:57121366-57121385 Msa0030710:CDS 35.0%
TTTGTTCACTTCTCGTGTTA+TGG + chr1_1:57121440-57121459 Msa0030710:intron 35.0%
TGCAAGCTTCAACAAATTGA+GGG - chr1_1:57121699-57121718 None:intergenic 35.0%
!! AGCTCATTTTCAAAGTGTCA+AGG - chr1_1:57121802-57121821 None:intergenic 35.0%
! TTGACACTTTGAAAATGAGC+TGG + chr1_1:57121801-57121820 Msa0030710:intron 35.0%
ATTGATTATGGCACTACTCT+TGG - chr1_1:57121896-57121915 None:intergenic 35.0%
! TTTCGAATTGCTTTGAATGC+AGG + chr1_1:57122116-57122135 Msa0030710:intron 35.0%
!! GCTTTGAATGCAGGTTATTT+TGG + chr1_1:57122125-57122144 Msa0030710:intron 35.0%
ACAGAGTTAGGAAAGAACTT+CGG - chr1_1:57122252-57122271 None:intergenic 35.0%
!! TCAAGTTGGTTTCCAGTTAA+AGG + chr1_1:57122271-57122290 Msa0030710:intron 35.0%
TTCCAGTTAAAGGATGAAGA+AGG + chr1_1:57122281-57122300 Msa0030710:intron 35.0%
AGTCAATGATTTGACAGTAC+AGG - chr1_1:57122435-57122454 None:intergenic 35.0%
AATGACAAGATCTACATCAC+TGG - chr1_1:57108955-57108974 None:intergenic 35.0%
ATTGGAGTCTTACATTACTC+AGG - chr1_1:57122770-57122789 None:intergenic 35.0%
AAACACGGTATCAAATCCAA+AGG - chr1_1:57122852-57122871 None:intergenic 35.0%
GGATTTGATACCGTGTTTAA+TGG + chr1_1:57122854-57122873 Msa0030710:intron 35.0%
TTGAATCTCATCCCATAAGT+TGG + chr1_1:57122879-57122898 Msa0030710:intron 35.0%
!! CGACAACTAAAAAGGTATCA+AGG + chr1_1:57123271-57123290 Msa0030710:intron 35.0%
CTATTGTTCGGATTGAGATT+CGG + chr1_1:57123328-57123347 Msa0030710:intron 35.0%
ACTTTCCCACCTTAAAATCA+CGG + chr1_1:57123458-57123477 Msa0030710:intron 35.0%
!!! AAATCCCGTGATTTTAAGGT+GGG - chr1_1:57123466-57123485 None:intergenic 35.0%
! ATCGAAATCCCGTGATTTTA+AGG - chr1_1:57123470-57123489 None:intergenic 35.0%
CTTTAGTTAATCCTCCAATG+AGG + chr1_1:57123513-57123532 Msa0030710:intron 35.0%
TTCACTAGGAAAAACTGACT+AGG - chr1_1:57123566-57123585 None:intergenic 35.0%
GTCAGCGTTTAAATTTCACT+AGG - chr1_1:57123580-57123599 None:intergenic 35.0%
GCTGACACATTTATTATGAC+AGG + chr1_1:57123594-57123613 Msa0030710:intron 35.0%
ACTCAAGATTGAGATCAGTA+AGG - chr1_1:57123918-57123937 None:intergenic 35.0%
!! GAACGGGTTTTGCATATTTT+AGG - chr1_1:57123946-57123965 None:intergenic 35.0%
TAAAGAACACGCCAATTATC+AGG - chr1_1:57124001-57124020 None:intergenic 35.0%
TATCACCAACACAAACTCAC+AGG + chr1_1:57105455-57105474 Msa0030710:CDS 40.0%
TTACTCTTTCAACAACCTGC+AGG + chr1_1:57105545-57105564 Msa0030710:CDS 40.0%
TACTCTTTCAACAACCTGCA+GGG + chr1_1:57105546-57105565 Msa0030710:CDS 40.0%
TAGTGGTTGGGAATGATGAT+TGG - chr1_1:57105617-57105636 None:intergenic 40.0%
AATCATCATTCCCAACCACT+AGG + chr1_1:57105616-57105635 Msa0030710:CDS 40.0%
TTAAGGGATACCTAGTGGTT+GGG - chr1_1:57105629-57105648 None:intergenic 40.0%
TTTAAGGGATACCTAGTGGT+TGG - chr1_1:57105630-57105649 None:intergenic 40.0%
GCAAACTGAGTTATGCTCAA+GGG - chr1_1:57105770-57105789 None:intergenic 40.0%
TGCAAACTGAGTTATGCTCA+AGG - chr1_1:57105771-57105790 None:intergenic 40.0%
TTGAGCATAACTCAGTTTGC+AGG + chr1_1:57105770-57105789 Msa0030710:intron 40.0%
TGAGCATAACTCAGTTTGCA+GGG + chr1_1:57105771-57105790 Msa0030710:intron 40.0%
GTGTTTGAACTTTGGATTCC+CGG + chr1_1:57105815-57105834 Msa0030710:intron 40.0%
ACCACTTGAGGTTAATAAGC+CGG - chr1_1:57105837-57105856 None:intergenic 40.0%
TGCTAGAAATTCACCACTTG+AGG - chr1_1:57105849-57105868 None:intergenic 40.0%
!! AGTGGTGAATTTCTAGCACT+AGG + chr1_1:57105851-57105870 Msa0030710:intron 40.0%
AATGGTGCATGCTGAGTATT+TGG - chr1_1:57106328-57106347 None:intergenic 40.0%
TGGATAAATCTCCTAGACAG+TGG + chr1_1:57106402-57106421 Msa0030710:CDS 40.0%
TGAGATCATACTTGTAGGAG+GGG - chr1_1:57106431-57106450 None:intergenic 40.0%
GTGAGATCATACTTGTAGGA+GGG - chr1_1:57106432-57106451 None:intergenic 40.0%
TGTGAGATCATACTTGTAGG+AGG - chr1_1:57106433-57106452 None:intergenic 40.0%
!! TCAGCTTTATTTGCAGCATC+AGG - chr1_1:57106568-57106587 None:intergenic 40.0%
! CCCTTTTCGTTTACTTTGAG+AGG + chr1_1:57106632-57106651 Msa0030710:intron 40.0%
GCCTGATGTTTATGAGAAAC+AGG - chr1_1:57106678-57106697 None:intergenic 40.0%
AAGAAAGATCCTGCAAGTCA+TGG + chr1_1:57106804-57106823 Msa0030710:CDS 40.0%
! TTTGTTCACTTCTGGTGTTG+TGG + chr1_1:57107505-57107524 Msa0030710:intron 40.0%
GCAAGCTTCAAGAAATTGAG+GGG - chr1_1:57107788-57107807 None:intergenic 40.0%
CTGCAAGCTTCAAGAAATTG+AGG - chr1_1:57107790-57107809 None:intergenic 40.0%
!!! TAGGGATGGAATGTCGTTTT+CGG + chr1_1:57107820-57107839 Msa0030710:CDS 40.0%
TCAAGGTCATCGATAATCCA+TGG - chr1_1:57107872-57107891 None:intergenic 40.0%
GAGTAAGAAGTCGTGGAAAA+AGG + chr1_1:57107910-57107929 Msa0030710:intron 40.0%
GGAAAAAGGCAAGTGTCATA+TGG + chr1_1:57107924-57107943 Msa0030710:intron 40.0%
GTGTCTATATTTGTGGACAG+AGG + chr1_1:57108221-57108240 Msa0030710:intron 40.0%
TGCCAGTTAAAGGATGAAGA+AGG + chr1_1:57108710-57108729 Msa0030710:intron 40.0%
GTCCTTCTTCATCCTTTAAC+TGG - chr1_1:57108715-57108734 None:intergenic 40.0%
CAAGATCTACATCACTGGTA+AGG - chr1_1:57108950-57108969 None:intergenic 40.0%
AAGTGACAGAAAGGAACGAA+AGG - chr1_1:57109114-57109133 None:intergenic 40.0%
AACAGAGGGAGTAGTTGATT+GGG + chr1_1:57109322-57109341 Msa0030710:intron 40.0%
ACTGACACATCTCTTATGAC+AGG + chr1_1:57109465-57109484 Msa0030710:intron 40.0%
CTGACACATCTCTTATGACA+GGG + chr1_1:57109466-57109485 Msa0030710:intron 40.0%
TGACACATCTCTTATGACAG+GGG + chr1_1:57109467-57109486 Msa0030710:intron 40.0%
TCAAGAAATTCTGCAACCTC+AGG - chr1_1:57109659-57109678 None:intergenic 40.0%
TCTCGGATTTATAGTCTGGA+GGG - chr1_1:57110018-57110037 None:intergenic 40.0%
ATCTCGGATTTATAGTCTGG+AGG - chr1_1:57110019-57110038 None:intergenic 40.0%
GGGTGAGTGGTATGATAATT+TGG - chr1_1:57110273-57110292 None:intergenic 40.0%
TGACACGTGATATGATGATC+GGG - chr1_1:57110293-57110312 None:intergenic 40.0%
GTGACACGTGATATGATGAT+CGG - chr1_1:57110294-57110313 None:intergenic 40.0%
! AACAGCTTGTTCAAGACTCT+AGG + chr1_1:57110541-57110560 Msa0030710:intron 40.0%
CAGAGATCCTTTACCTGAAA+AGG + chr1_1:57110584-57110603 Msa0030710:intron 40.0%
!!! GTAGAGTCCTTTTCAGGTAA+AGG - chr1_1:57110594-57110613 None:intergenic 40.0%
! ACAGCAACAGTAAAAGCATG+AGG - chr1_1:57110652-57110671 None:intergenic 40.0%
AACTTACCAGGACAGAATTG+TGG + chr1_1:57110679-57110698 Msa0030710:intron 40.0%
ATGGGAACAAAACAAACACG+TGG - chr1_1:57110764-57110783 None:intergenic 40.0%
GACTATAGTGACAGTGATGA+TGG - chr1_1:57111113-57111132 None:intergenic 40.0%
ATATGAGACCCATCAAGAGT+TGG + chr1_1:57111593-57111612 Msa0030710:intron 40.0%
TTGACATCCATACAAAGCTG+TGG - chr1_1:57111637-57111656 None:intergenic 40.0%
CAAAGATGAGACAAAGTGTG+TGG - chr1_1:57111706-57111725 None:intergenic 40.0%
CATGGCATTCATTAGGTTCT+TGG - chr1_1:57111797-57111816 None:intergenic 40.0%
!! TAGACCTAACTTCTAAGGTC+AGG + chr1_1:57111912-57111931 Msa0030710:intron 40.0%
ATGGAGGTTTGTAGTTCACT+TGG - chr1_1:57111999-57112018 None:intergenic 40.0%
CTGGATATGGACACAAACAT+CGG - chr1_1:57112242-57112261 None:intergenic 40.0%
CAGCATCTATGAGTTTGAGT+TGG - chr1_1:57112308-57112327 None:intergenic 40.0%
TTACTCTTTCAACAACCTGC+AGG + chr1_1:57105545-57105564 Msa0030710:CDS 40.0%
TACTCTTTCAACAACCTGCA+GGG + chr1_1:57105546-57105565 Msa0030710:CDS 40.0%
! AGTGTTGTTGTTCTTGATGC+TGG + chr1_1:57112567-57112586 Msa0030710:intron 40.0%
! GACGACGATGATGTGTTTTA+TGG + chr1_1:57112639-57112658 Msa0030710:intron 40.0%
! TTTGCATGATTGAAGGGTGT+TGG + chr1_1:57112819-57112838 Msa0030710:intron 40.0%
CATTAGAACCTTTGGCAAAG+GGG + chr1_1:57112909-57112928 Msa0030710:intron 40.0%
TCACACTTGAACCAATGCTA+AGG - chr1_1:57112946-57112965 None:intergenic 40.0%
CTAATGCATGAGTGAATTGC+TGG + chr1_1:57113235-57113254 Msa0030710:intron 40.0%
ATACTGTTAGGAGATACGCT+TGG + chr1_1:57113275-57113294 Msa0030710:intron 40.0%
AGGAACTCATAGTATCCTGA+AGG + chr1_1:57113320-57113339 Msa0030710:intron 40.0%
GGAACTCATAGTATCCTGAA+GGG + chr1_1:57113321-57113340 Msa0030710:intron 40.0%
GAACTCATAGTATCCTGAAG+GGG + chr1_1:57113322-57113341 Msa0030710:intron 40.0%
TGGATGCAATAAGGAATGAC+CGG - chr1_1:57113353-57113372 None:intergenic 40.0%
CCCCCACCAATAACTATAAT+TGG - chr1_1:57113373-57113392 None:intergenic 40.0%
GGGTTGTCATACTAACCTTT+AGG - chr1_1:57113405-57113424 None:intergenic 40.0%
GCATGTAAACTCAAAGCGTA+TGG - chr1_1:57113427-57113446 None:intergenic 40.0%
ATTGTTGGATCTTGTGTTGG+GGG - chr1_1:57113587-57113606 None:intergenic 40.0%
GATTGTTGGATCTTGTGTTG+GGG - chr1_1:57113588-57113607 None:intergenic 40.0%
TTACCGTTCACCGTAGTTAT+GGG - chr1_1:57113680-57113699 None:intergenic 40.0%
TTTACCGTTCACCGTAGTTA+TGG - chr1_1:57113681-57113700 None:intergenic 40.0%
ACTTGATGCTACTCAAGTGT+GGG - chr1_1:57114954-57114973 None:intergenic 40.0%
ACTTGAGTAGCATCAAGTCT+TGG + chr1_1:57114956-57114975 Msa0030710:intron 40.0%
CTTGAGTAGCATCAAGTCTT+GGG + chr1_1:57114957-57114976 Msa0030710:intron 40.0%
AGAAGAAAAAGGGTAGGATG+AGG + chr1_1:57115064-57115083 Msa0030710:intron 40.0%
! GGATGAGGTTTTCCTCTTAA+TGG + chr1_1:57115079-57115098 Msa0030710:intron 40.0%
TGCTGGAATGCATACTTATG+GGG + chr1_1:57115118-57115137 Msa0030710:intron 40.0%
GCCAAACTTCATTCTCACAT+AGG - chr1_1:57115162-57115181 None:intergenic 40.0%
TCGCTCATTCCCAAATAGTA+TGG - chr1_1:57115354-57115373 None:intergenic 40.0%
CGTGAGATACCATTATCTGA+AGG + chr1_1:57115404-57115423 Msa0030710:intron 40.0%
GATACCATTATCTGAAGGCA+TGG + chr1_1:57115409-57115428 Msa0030710:intron 40.0%
! ATCTGAAGGCATGGAATTTC+CGG + chr1_1:57115418-57115437 Msa0030710:intron 40.0%
CATTAGAACCTTTGGCAAAG+GGG + chr1_1:57112909-57112928 Msa0030710:intron 40.0%
TCACACTTGAACCAATGCTA+AGG - chr1_1:57112946-57112965 None:intergenic 40.0%
GGTTCTTTCTCTCATGTGAA+GGG + chr1_1:57115728-57115747 Msa0030710:intron 40.0%
CTAATGCATGAGTGAATTGC+TGG + chr1_1:57113235-57113254 Msa0030710:intron 40.0%
ATACTGTTAGGAGATACGCT+TGG + chr1_1:57113275-57113294 Msa0030710:intron 40.0%
GGATCGAACTATTTCACTTG+CGG + chr1_1:57116146-57116165 Msa0030710:intron 40.0%
! TGGAAATAACGATGTCGCTT+TGG - chr1_1:57116277-57116296 None:intergenic 40.0%
! AAAGCGACATCGTTATTTCC+AGG + chr1_1:57116276-57116295 Msa0030710:intron 40.0%
CGAATGTTTAAACGCTAACC+TGG - chr1_1:57116297-57116316 None:intergenic 40.0%
ATACTTAATCAGGCTGGACA+CGG - chr1_1:57116369-57116388 None:intergenic 40.0%
TTTCGGATACTTAATCAGGC+TGG - chr1_1:57116375-57116394 None:intergenic 40.0%
CATTGAGACATCAAGGATCT+TGG - chr1_1:57116706-57116725 None:intergenic 40.0%
TAGCGTAGGTACAAAAACAC+AGG - chr1_1:57116872-57116891 None:intergenic 40.0%
AAGCCCATTGGTCAGATTAT+AGG - chr1_1:57116930-57116949 None:intergenic 40.0%
! TATAAGCGTAGAAGCTCTAG+AGG - chr1_1:57117007-57117026 None:intergenic 40.0%
AAGAAACACGCTATTAGCGT+GGG - chr1_1:57117036-57117055 None:intergenic 40.0%
TGTGCAGGAAAATACAAGCA+AGG - chr1_1:57117279-57117298 None:intergenic 40.0%
GAACTCATAGTATCCTGACA+GGG + chr1_1:57117438-57117457 Msa0030710:intron 40.0%
TGGATGCAATAAGGAATGAC+CGG - chr1_1:57113353-57113372 None:intergenic 40.0%
CCCCCACCAATAACTATAAT+TGG - chr1_1:57113373-57113392 None:intergenic 40.0%
GCATGTAAACTCAAAGCGTA+TGG - chr1_1:57113427-57113446 None:intergenic 40.0%
TTTGTTGGATCTTGTGTTGG+GGG - chr1_1:57117703-57117722 None:intergenic 40.0%
CTTTGTTGGATCTTGTGTTG+GGG - chr1_1:57117704-57117723 None:intergenic 40.0%
CCTTTGTTGGATCTTGTGTT+GGG - chr1_1:57117705-57117724 None:intergenic 40.0%
CCAACACAAGATCCAACAAA+GGG + chr1_1:57117703-57117722 Msa0030710:intron 40.0%
! ACGGAGGGAGTATATCTATA+TGG - chr1_1:57117978-57117997 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_1:57118219-57118238 None:intergenic 40.0%
GTGTGCTGAGTATTAATTGG+AGG + chr1_1:57118131-57118150 Msa0030710:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + chr1_1:57118219-57118238 Msa0030710:intron 40.0%
! GGACTTTTGGATCATCAGAA+GGG - chr1_1:57119019-57119038 None:intergenic 40.0%
AGAGAACATACTTGTAGGAG+GGG - chr1_1:57119088-57119107 None:intergenic 40.0%
GAGAGAACATACTTGTAGGA+GGG - chr1_1:57119089-57119108 None:intergenic 40.0%
TGAGAGAACATACTTGTAGG+AGG - chr1_1:57119090-57119109 None:intergenic 40.0%
AAGAAAGATCCTGCAAGTCA+TGG + chr1_1:57106804-57106823 Msa0030710:CDS 40.0%
GAGGAACTCCTTAAAGAACT+AGG + chr1_1:57119630-57119649 Msa0030710:intron 40.0%
! AAAGAACTAGGGTTTAGAGC+AGG + chr1_1:57119642-57119661 Msa0030710:intron 40.0%
! AAGAACTAGGGTTTAGAGCA+GGG + chr1_1:57119643-57119662 Msa0030710:intron 40.0%
CAGCGGCCTATTAGTATTAT+AGG - chr1_1:57119785-57119804 None:intergenic 40.0%
CTATAATACTAATAGGCCGC+TGG + chr1_1:57119783-57119802 Msa0030710:intron 40.0%
!!! GATGGCCTTTGTTGTTTTTG+TGG - chr1_1:57119932-57119951 None:intergenic 40.0%
GAAATCGAATGGGTGATCAA+TGG - chr1_1:57120096-57120115 None:intergenic 40.0%
AACCAGTTGCGAAATCGAAT+GGG - chr1_1:57120106-57120125 None:intergenic 40.0%
AAACCAGTTGCGAAATCGAA+TGG - chr1_1:57120107-57120126 None:intergenic 40.0%
AGACACAAGAAACAAGGAAG+AGG + chr1_1:57120573-57120592 Msa0030710:intron 40.0%
TTGATGTGGTTGAAACAGAG+AGG + chr1_1:57120637-57120656 Msa0030710:intron 40.0%
TGATGTGGTTGAAACAGAGA+GGG + chr1_1:57120638-57120657 Msa0030710:intron 40.0%
! GAAAGCGTGATTGTGAATTG+TGG + chr1_1:57120693-57120712 Msa0030710:intron 40.0%
TGATTGTGAATTGTGGATGG+CGG + chr1_1:57120700-57120719 Msa0030710:intron 40.0%
TGTGTTGTGTTGTGTTGTGT+TGG + chr1_1:57120727-57120746 Msa0030710:intron 40.0%
!! TACTAAAGCAATAGTGGGTG+GGG + chr1_1:57120842-57120861 Msa0030710:intron 40.0%
TTAGAAAGATTTGTGCAGGC+AGG + chr1_1:57120904-57120923 Msa0030710:intron 40.0%
CGAAGATATCTCTAAACCAG+GGG - chr1_1:57120958-57120977 None:intergenic 40.0%
CTCGAAGATATCTCTAAACC+AGG - chr1_1:57120960-57120979 None:intergenic 40.0%
TCCGCTAAAATGTGGAAGAA+TGG + chr1_1:57121034-57121053 Msa0030710:intron 40.0%
CATCTTACAGCAAGAATAGG+TGG + chr1_1:57121095-57121114 Msa0030710:intron 40.0%
CATTAAGATAGGAGATGGAG+TGG + chr1_1:57121191-57121210 Msa0030710:intron 40.0%
CTGCAAGCTTCAACAAATTG+AGG - chr1_1:57121700-57121719 None:intergenic 40.0%
TCAAGGTCATCGATAATCCA+TGG - chr1_1:57107872-57107891 None:intergenic 40.0%
!! TAGGTGTTTTGCCATTTGCA+AGG + chr1_1:57121972-57121991 Msa0030710:CDS 40.0%
!! AGGTGTTTTGCCATTTGCAA+GGG + chr1_1:57121973-57121992 Msa0030710:CDS 40.0%
CTTTCCTAACTCTGTCAAGT+TGG + chr1_1:57122257-57122276 Msa0030710:intron 40.0%
GAAACCAACTTGACAGAGTT+AGG - chr1_1:57122264-57122283 None:intergenic 40.0%
GTCCTTCTTCATCCTTTAAC+TGG - chr1_1:57108715-57108734 None:intergenic 40.0%
!! TGTTTTGTTCCTTGGATTGC+AGG + chr1_1:57122489-57122508 Msa0030710:intron 40.0%
GCAGGCTATTGATCTTACAT+AGG + chr1_1:57122507-57122526 Msa0030710:intron 40.0%
TGAGCGTGTTAAAAGGATGA+AGG + chr1_1:57122702-57122721 Msa0030710:intron 40.0%
AATCAACCTCACGTCTATCA+TGG + chr1_1:57122798-57122817 Msa0030710:intron 40.0%
GTTGTATTGGAGTCTCACAT+TGG - chr1_1:57122961-57122980 None:intergenic 40.0%
ACTGCTGAGAGAGAAATATG+TGG + chr1_1:57123146-57123165 Msa0030710:intron 40.0%
!! GAGATTCGGTGATTATAAGG+TGG + chr1_1:57123342-57123361 Msa0030710:intron 40.0%
CTTTCCCACCTTAAAATCAC+GGG + chr1_1:57123459-57123478 Msa0030710:intron 40.0%
!! GAAATCCCGTGATTTTAAGG+TGG - chr1_1:57123467-57123486 None:intergenic 40.0%
TGTACTAGTATAGGCCTCAT+TGG - chr1_1:57123530-57123549 None:intergenic 40.0%
GCGCATAACTGTACTAGTAT+AGG - chr1_1:57123539-57123558 None:intergenic 40.0%
CATTTATTATGACAGGGTCG+TGG + chr1_1:57123601-57123620 Msa0030710:intron 40.0%
AGAGCAAAATCGCAAATCGT+AGG - chr1_1:57123894-57123913 None:intergenic 40.0%
CAGGGACATTGTGATATGCA+GGG + chr1_1:57105789-57105808 Msa0030710:intron 45.0%
GACATTGTGATATGCAGGGT+CGG + chr1_1:57105793-57105812 Msa0030710:intron 45.0%
CCACTTGAGGTTAATAAGCC+GGG - chr1_1:57105836-57105855 None:intergenic 45.0%
GGCAAGTAGTAGATCACAGT+TGG + chr1_1:57106266-57106285 Msa0030710:CDS 45.0%
TCACTTCCACCGAGTTATCT+TGG + chr1_1:57106382-57106401 Msa0030710:CDS 45.0%
GCTTGCACTGTCTTTATCCT+AGG + chr1_1:57106696-57106715 Msa0030710:intron 45.0%
GCTTCTATGTAGACTTCGTG+AGG + chr1_1:57106972-57106991 Msa0030710:intron 45.0%
CATTAAGATAGGGGATGGAG+TGG + chr1_1:57107245-57107264 Msa0030710:intron 45.0%
ACAGGCTGAAGAGAATGCAA+AGG + chr1_1:57107336-57107355 Msa0030710:intron 45.0%
GCAGGGAACGTATTTGATCT+TGG + chr1_1:57107448-57107467 Msa0030710:CDS 45.0%
! ATTTGATCTTGGTTCTCCCC+AGG + chr1_1:57107459-57107478 Msa0030710:CDS 45.0%
CTCACAAACCGAGAAAGAGA+TGG + chr1_1:57107573-57107592 Msa0030710:intron 45.0%
AGCTTGCAGAAGCTTTCTCT+AGG + chr1_1:57107801-57107820 Msa0030710:intron 45.0%
GCTTGCAGAAGCTTTCTCTA+GGG + chr1_1:57107802-57107821 Msa0030710:intron 45.0%
AAAATCTTCTCCCTCGACCA+TGG + chr1_1:57107852-57107871 Msa0030710:CDS 45.0%
CATCGATAATCCATGGTCGA+GGG - chr1_1:57107865-57107884 None:intergenic 45.0%
TCATCGATAATCCATGGTCG+AGG - chr1_1:57107866-57107885 None:intergenic 45.0%
TCAGATGGAGTAAGAAGTCG+TGG + chr1_1:57107903-57107922 Msa0030710:intron 45.0%
CACGTGCAAAACACGTCATA+TGG - chr1_1:57108294-57108313 None:intergenic 45.0%
AATGTGTTGCAGGCAATACC+TGG + chr1_1:57108389-57108408 Msa0030710:intron 45.0%
! TCTCGAATTGCTTTGAGTGC+AGG + chr1_1:57108545-57108564 Msa0030710:intron 45.0%
!! GCTTTGAGTGCAGGTTGTTT+TGG + chr1_1:57108554-57108573 Msa0030710:intron 45.0%
GATGAAGAAGGACGTCTCTT+GGG + chr1_1:57108722-57108741 Msa0030710:CDS 45.0%
GAACAGAGGGAGTAGTTGAT+TGG + chr1_1:57109321-57109340 Msa0030710:intron 45.0%
CTTACAGGTGAAACATCCTG+AGG + chr1_1:57109640-57109659 Msa0030710:intron 45.0%
TGATATGATGATCGGGTGAG+TGG - chr1_1:57110286-57110305 None:intergenic 45.0%
AGACAACCACAATTCTGTCC+TGG - chr1_1:57110688-57110707 None:intergenic 45.0%
!! ACTAACACATTCGGTGCATG+AGG - chr1_1:57111460-57111479 None:intergenic 45.0%
! TCTTGATGGGTCTCATATGC+TGG - chr1_1:57111591-57111610 None:intergenic 45.0%
CATCCATACAAAGCTGTGGT+GGG - chr1_1:57111633-57111652 None:intergenic 45.0%
ACATCCATACAAAGCTGTGG+TGG - chr1_1:57111634-57111653 None:intergenic 45.0%
CGTTGATATTGAGCTCGCAT+CGG + chr1_1:57111666-57111685 Msa0030710:intron 45.0%
! GCACAACTTCTTTGGCTTCA+AGG + chr1_1:57111764-57111783 Msa0030710:intron 45.0%
TGCATTATGCATGTGGGGTT+GGG - chr1_1:57111844-57111863 None:intergenic 45.0%
ATGCATTATGCATGTGGGGT+TGG - chr1_1:57111845-57111864 None:intergenic 45.0%
TGTGCCTGACCTTAGAAGTT+AGG - chr1_1:57111919-57111938 None:intergenic 45.0%
CACAAACATCGGACATGACA+CGG - chr1_1:57112231-57112250 None:intergenic 45.0%
GTTGTTCTTGATGCTGGTGA+AGG + chr1_1:57112573-57112592 Msa0030710:intron 45.0%
ATTAAGCACCCCTTTGCCAA+AGG - chr1_1:57112920-57112939 None:intergenic 45.0%
GGTGCTTTCTCTCATGTGAA+GGG + chr1_1:57113086-57113105 Msa0030710:intron 45.0%
TGGTTGTGCAATACACGTCA+AGG + chr1_1:57113300-57113319 Msa0030710:intron 45.0%
TCACCCATAACTACGGTGAA+CGG + chr1_1:57113674-57113693 Msa0030710:intron 45.0%
GACTTGATGCTACTCAAGTG+TGG - chr1_1:57114955-57114974 None:intergenic 45.0%
GCATCAAGTCTTGGGTTCAA+TGG + chr1_1:57114965-57114984 Msa0030710:intron 45.0%
! TCCAAGTACTTTTGCCCCTT+GGG - chr1_1:57115039-57115058 None:intergenic 45.0%
AATGAAGTTTGGCCGCTTCA+CGG + chr1_1:57115169-57115188 Msa0030710:intron 45.0%
ATTAAGCACCCCTTTGCCAA+AGG - chr1_1:57112920-57112939 None:intergenic 45.0%
GGGTTCTTTCTCTCATGTGA+AGG + chr1_1:57115727-57115746 Msa0030710:intron 45.0%
TGGTTGTGCAATACACGTCA+AGG + chr1_1:57113300-57113319 Msa0030710:intron 45.0%
! TCGTTTTCCACAAGGAGTTG+CGG + chr1_1:57116022-57116041 Msa0030710:intron 45.0%
TGATATACCGCAACTCCTTG+TGG - chr1_1:57116032-57116051 None:intergenic 45.0%
AGACATCAAGGATCTTGGCA+TGG - chr1_1:57116701-57116720 None:intergenic 45.0%
GTAATCTGCGCTATTAGCGT+AGG - chr1_1:57116886-57116905 None:intergenic 45.0%
ACGCTAATAGCGTGGTAAGT+CGG + chr1_1:57116904-57116923 Msa0030710:intron 45.0%
TCGGCCTATAATCTGACCAA+TGG + chr1_1:57116923-57116942 Msa0030710:intron 45.0%
CGGCCTATAATCTGACCAAT+GGG + chr1_1:57116924-57116943 Msa0030710:intron 45.0%
GAAGAAACACGCTATTAGCG+TGG - chr1_1:57117037-57117056 None:intergenic 45.0%
ATACGCCATTAGCGTACCTT+GGG - chr1_1:57117170-57117189 None:intergenic 45.0%
CTTCATCACGCTAATAGCGT+AGG + chr1_1:57117210-57117229 Msa0030710:intron 45.0%
GGAACTCATAGTATCCTGAC+AGG + chr1_1:57117437-57117456 Msa0030710:intron 45.0%
GGGTTGCCATACTAACCTTT+AGG - chr1_1:57117521-57117540 None:intergenic 45.0%
CCCAACACAAGATCCAACAA+AGG + chr1_1:57113586-57113605 Msa0030710:intron 45.0%
CCCTTTGTTGGATCTTGTGT+TGG - chr1_1:57117706-57117725 None:intergenic 45.0%
CACAAGATCCAACAAAGGGT+TGG + chr1_1:57117707-57117726 Msa0030710:intron 45.0%
AGGTGGACCAACATTGTATG+TGG - chr1_1:57117777-57117796 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_1:57118218-57118237 None:intergenic 45.0%
! GGAGGGTACAATTGAAGCAT+TGG + chr1_1:57118149-57118168 Msa0030710:intron 45.0%
GGCAATTAGTACACCACAGT+TGG + chr1_1:57118923-57118942 Msa0030710:CDS 45.0%
AAAGGGAATCTCACCAACTG+TGG - chr1_1:57118939-57118958 None:intergenic 45.0%
GGTGAGATTCCCTTTGTTGA+TGG + chr1_1:57118944-57118963 Msa0030710:CDS 45.0%
ATTCAGCATGCACCATTCCT+TGG + chr1_1:57118988-57119007 Msa0030710:CDS 45.0%
! GGGACTTTTGGATCATCAGA+AGG - chr1_1:57119020-57119039 None:intergenic 45.0%
AAGATAACTCAGTGGGAGTG+GGG - chr1_1:57119040-57119059 None:intergenic 45.0%
CAAGATAACTCAGTGGGAGT+GGG - chr1_1:57119041-57119060 None:intergenic 45.0%
!! TCGGCTTTATTTGCAGCATC+AGG - chr1_1:57119234-57119253 None:intergenic 45.0%
! AGAGGATTTCCATGACTTGC+AGG - chr1_1:57119454-57119473 None:intergenic 45.0%
! AGAACTAGGGTTTAGAGCAG+GGG + chr1_1:57119644-57119663 Msa0030710:intron 45.0%
GAGCCAGGAATTTCAACTAG+TGG + chr1_1:57119669-57119688 Msa0030710:intron 45.0%
CCTCCACTAGTTGAAATTCC+TGG - chr1_1:57119675-57119694 None:intergenic 45.0%
CCAGGAATTTCAACTAGTGG+AGG + chr1_1:57119672-57119691 Msa0030710:intron 45.0%
!!! TGGTTTTGGAGCTTAGGCAA+GGG - chr1_1:57119912-57119931 None:intergenic 45.0%
!!! GTTGGGTTTTGGTTTGGTGA+TGG - chr1_1:57119950-57119969 None:intergenic 45.0%
!!! TTGGCAGTTGGGTTTTGGTT+TGG - chr1_1:57119956-57119975 None:intergenic 45.0%
! TGTTGTTGGCAGTTGGGTTT+TGG - chr1_1:57119961-57119980 None:intergenic 45.0%
ACCTCTTAGATCACCACCAA+TGG + chr1_1:57120514-57120533 Msa0030710:intron 45.0%
!! TCCATTGGTGGTGATCTAAG+AGG - chr1_1:57120518-57120537 None:intergenic 45.0%
TCTTAGATCACCACCAATGG+AGG + chr1_1:57120517-57120536 Msa0030710:intron 45.0%
TTTCTGTCTTCCTCCATTGG+TGG - chr1_1:57120530-57120549 None:intergenic 45.0%
GCGTGATTGTGAATTGTGGA+TGG + chr1_1:57120697-57120716 Msa0030710:intron 45.0%
GATTGTGAATTGTGGATGGC+GGG + chr1_1:57120701-57120720 Msa0030710:intron 45.0%
AGATATCTCTAAACCAGGGG+CGG - chr1_1:57120955-57120974 None:intergenic 45.0%
! ATTTGATCTTGGTTCTCCCC+AGG + chr1_1:57107459-57107478 Msa0030710:CDS 45.0%
AGCTTGCAGAAGCTTTCTCT+AGG + chr1_1:57107801-57107820 Msa0030710:intron 45.0%
GCTTGCAGAAGCTTTCTCTA+GGG + chr1_1:57107802-57107821 Msa0030710:intron 45.0%
!! CAGAAGCTTTCTCTAGGGTT+GGG + chr1_1:57121717-57121736 Msa0030710:intron 45.0%
!! AGAAGCTTTCTCTAGGGTTG+GGG + chr1_1:57121718-57121737 Msa0030710:intron 45.0%
AAAATCTCCAACCTCGACCA+TGG + chr1_1:57121765-57121784 Msa0030710:intron 45.0%
TCATCGATAATCCATGGTCG+AGG - chr1_1:57107866-57107885 None:intergenic 45.0%
TATGACACTTGCCTTCTTCC+AGG - chr1_1:57121837-57121856 None:intergenic 45.0%
GGAAGAAGGCAAGTGTCATA+TGG + chr1_1:57121837-57121856 Msa0030710:intron 45.0%
GATGAAGAAGGACGTCTCTT+GGG + chr1_1:57108722-57108741 Msa0030710:CDS 45.0%
GATCAATAGCCTGCAATCCA+AGG - chr1_1:57122501-57122520 None:intergenic 45.0%
GGTTCCCAAATCGTTGGATT+TGG - chr1_1:57122749-57122768 None:intergenic 45.0%
TACTCAGGTTCCCAAATCGT+TGG - chr1_1:57122755-57122774 None:intergenic 45.0%
TAGGATCCATGATAGACGTG+AGG - chr1_1:57122807-57122826 None:intergenic 45.0%
ATTGGAGTCTCACATTGGTC+AGG - chr1_1:57122956-57122975 None:intergenic 45.0%
ACTAGTATAGGCCTCATTGG+AGG - chr1_1:57123527-57123546 None:intergenic 45.0%
!!! ACTATTATATTTTAAATTTA+GGG - chr1_1:57111151-57111170 None:intergenic 5.0%
!!! AACTATTATATTTTAAATTT+AGG - chr1_1:57111152-57111171 None:intergenic 5.0%
!!! ATTTAAAATAGTTAAATAAT+AGG + chr1_1:57111191-57111210 Msa0030710:intron 5.0%
!! TAAAAAGAAATATATTTATA+TGG - chr1_1:57118387-57118406 None:intergenic 5.0%
CAGCACCTGTGAGTTTGTGT+TGG - chr1_1:57105463-57105482 None:intergenic 50.0%
CAACACAAACTCACAGGTGC+TGG + chr1_1:57105461-57105480 Msa0030710:CDS 50.0%
GAACAGAGAGTTAACCCTGC+AGG - chr1_1:57105563-57105582 None:intergenic 50.0%
GCAGGGACATTGTGATATGC+AGG + chr1_1:57105788-57105807 Msa0030710:intron 50.0%
! CAGGGTCGGTGTTTGAACTT+TGG + chr1_1:57105807-57105826 Msa0030710:intron 50.0%
CCCGGCTTATTAACCTCAAG+TGG + chr1_1:57105833-57105852 Msa0030710:intron 50.0%
ACTCAGCATGCACCATTCCT+TGG + chr1_1:57106331-57106350 Msa0030710:CDS 50.0%
AGAAGGGAACCTCCAAGGAA+TGG - chr1_1:57106346-57106365 None:intergenic 50.0%
TCATCAGAAGGGAACCTCCA+AGG - chr1_1:57106351-57106370 None:intergenic 50.0%
CTGCACGTGGATCATCAGAA+GGG - chr1_1:57106362-57106381 None:intergenic 50.0%
ACTGCACGTGGATCATCAGA+AGG - chr1_1:57106363-57106382 None:intergenic 50.0%
! GCAGAAGCTTTCTCTAGGGA+TGG + chr1_1:57107806-57107825 Msa0030710:CDS 50.0%
CATTTGCAAGGGAGCTCCTT+CGG + chr1_1:57108090-57108109 Msa0030710:CDS 50.0%
!!! TGTGTTTTAGCAGTGGGGGA+AGG + chr1_1:57108320-57108339 Msa0030710:intron 50.0%
GGGAAGGATGAGGTGGATAA+TGG + chr1_1:57108336-57108355 Msa0030710:intron 50.0%
GGATGAAGAAGGACGTCTCT+TGG + chr1_1:57108721-57108740 Msa0030710:CDS 50.0%
! CCGCTAGGCTTTGTAGAAAG+GGG - chr1_1:57109072-57109091 None:intergenic 50.0%
CCCCTTTCTACAAAGCCTAG+CGG + chr1_1:57109069-57109088 Msa0030710:intron 50.0%
! GCCGCTAGGCTTTGTAGAAA+GGG - chr1_1:57109073-57109092 None:intergenic 50.0%
GTTGTGTGAATTTCGCCGCT+AGG - chr1_1:57109087-57109106 None:intergenic 50.0%
! ACACCCACCACAGCTTTGTA+TGG + chr1_1:57111627-57111646 Msa0030710:intron 50.0%
CTCATAGATGCTGCAGCCAT+TGG + chr1_1:57112315-57112334 Msa0030710:intron 50.0%
GGATAGAGAGTTAACCCTGC+AGG - chr1_1:57112408-57112427 None:intergenic 50.0%
GGGTGCTTTCTCTCATGTGA+AGG + chr1_1:57113085-57113104 Msa0030710:intron 50.0%
! GTTAGGAGATACGCTTGGTG+TGG + chr1_1:57113280-57113299 Msa0030710:intron 50.0%
! GTGGGTTGAGTTTCCACCAT+TGG - chr1_1:57114936-57114955 None:intergenic 50.0%
!! TCCCAAGGGGCAAAAGTACT+TGG + chr1_1:57115035-57115054 Msa0030710:intron 50.0%
! GTCCAAGTACTTTTGCCCCT+TGG - chr1_1:57115040-57115059 None:intergenic 50.0%
AACCCTTGAACTCCGTGAAG+CGG - chr1_1:57115184-57115203 None:intergenic 50.0%
! GTTAGGAGATACGCTTGGTG+TGG + chr1_1:57113280-57113299 Msa0030710:intron 50.0%
CGCAGATTACGCTAATAGCG+TGG + chr1_1:57116896-57116915 Msa0030710:intron 50.0%
GTAGCTGAAGCGTAGAAGCA+GGG - chr1_1:57116970-57116989 None:intergenic 50.0%
CTTCAGCTACGCTAATAGCG+TGG + chr1_1:57116980-57116999 Msa0030710:intron 50.0%
TTCATGACAAGCTACGCTCC+AGG + chr1_1:57117054-57117073 Msa0030710:intron 50.0%
GATACGCCATTAGCGTACCT+TGG - chr1_1:57117171-57117190 None:intergenic 50.0%
ATGGCGTATCTCTCTGACCT+TGG + chr1_1:57117181-57117200 Msa0030710:intron 50.0%
TGGCGTATCTCTCTGACCTT+GGG + chr1_1:57117182-57117201 Msa0030710:intron 50.0%
GCGTGATGAAGAAATGCCCA+AGG - chr1_1:57117201-57117220 None:intergenic 50.0%
GGTCGGACCACATACAATGT+TGG + chr1_1:57117767-57117786 Msa0030710:intron 50.0%
CCAAGATAACTCAGTGGGAG+TGG - chr1_1:57119042-57119061 None:intergenic 50.0%
CCACTCCCACTGAGTTATCT+TGG + chr1_1:57119039-57119058 Msa0030710:CDS 50.0%
CACAACAGCACTGCAGCAAA+AGG + chr1_1:57119847-57119866 Msa0030710:intron 50.0%
!!! GTGGTTTTGGAGCTTAGGCA+AGG - chr1_1:57119913-57119932 None:intergenic 50.0%
CACCCATTCGATTTCGCAAC+TGG + chr1_1:57120101-57120120 Msa0030710:intron 50.0%
TGTGTTAGCCAATTGGGCCT+TGG + chr1_1:57120763-57120782 Msa0030710:intron 50.0%
GTGTTAGCCAATTGGGCCTT+GGG + chr1_1:57120764-57120783 Msa0030710:intron 50.0%
AGCCACTCACATGATTGTGG+GGG - chr1_1:57120932-57120951 None:intergenic 50.0%
GAGCCACTCACATGATTGTG+GGG - chr1_1:57120933-57120952 None:intergenic 50.0%
GGAGCCACTCACATGATTGT+GGG - chr1_1:57120934-57120953 None:intergenic 50.0%
GCGGGGAACGTATTTGATCT+TGG + chr1_1:57121383-57121402 Msa0030710:CDS 50.0%
!! GCAGAAGCTTTCTCTAGGGT+TGG + chr1_1:57121716-57121735 Msa0030710:intron 50.0%
!! GAAGCTTTCTCTAGGGTTGG+GGG + chr1_1:57121719-57121738 Msa0030710:intron 50.0%
CGATAATCCATGGTCGAGGT+TGG - chr1_1:57121775-57121794 None:intergenic 50.0%
GAGCAAGAAGTCCTGGAAGA+AGG + chr1_1:57121823-57121842 Msa0030710:intron 50.0%
CATTTGCAAGGGAGCTCCTT+CGG + chr1_1:57108090-57108109 Msa0030710:CDS 50.0%
GGATGAAGAAGGACGTCTCT+TGG + chr1_1:57108721-57108740 Msa0030710:CDS 50.0%
GGTGTGTGAACTTCGTTGCT+AGG - chr1_1:57122999-57123018 None:intergenic 50.0%
CAGCATGCACCATTCCTTGG+AGG + chr1_1:57106334-57106353 Msa0030710:CDS 55.0%
AGGAGGGGATACCACTGTCT+AGG - chr1_1:57106416-57106435 None:intergenic 55.0%
! AGAGGATCGCCATGACTTGC+AGG - chr1_1:57106816-57106835 None:intergenic 55.0%
CGAAGGAGCTCCCTTGCAAA+TGG - chr1_1:57108092-57108111 None:intergenic 55.0%
TTAGCAGTGGGGGAAGGATG+AGG + chr1_1:57108326-57108345 Msa0030710:intron 55.0%
! CGCCGCTAGGCTTTGTAGAA+AGG - chr1_1:57109074-57109093 None:intergenic 55.0%
CATCTCTTATGACAGGGGCG+CGG + chr1_1:57109472-57109491 Msa0030710:intron 55.0%
GTATCCTGAAGGGGATTCGC+CGG + chr1_1:57113331-57113350 Msa0030710:intron 55.0%
TGGGGGCGAATCGAACCTAA+AGG + chr1_1:57113387-57113406 Msa0030710:intron 55.0%
!! CGATGTCGCTTTGGACACGA+AGG - chr1_1:57116268-57116287 None:intergenic 55.0%
TGAAGCGTAGAAGCAGGGCA+AGG - chr1_1:57116965-57116984 None:intergenic 55.0%
CGTAGCTGAAGCGTAGAAGC+AGG - chr1_1:57116971-57116990 None:intergenic 55.0%
CATTAGCGTACCTTGGGCGT+AGG - chr1_1:57117164-57117183 None:intergenic 55.0%
CTACGCCCAAGGTACGCTAA+TGG + chr1_1:57117162-57117181 Msa0030710:intron 55.0%
GTATCCTGACAGGGATTCGC+CGG + chr1_1:57117447-57117466 Msa0030710:intron 55.0%
TGGGGGCGAATCGAACCTAA+AGG + chr1_1:57113387-57113406 Msa0030710:intron 55.0%
CAGCATGCACCATTCCTTGG+AGG + chr1_1:57106334-57106353 Msa0030710:CDS 55.0%
AGAAGGGAGCCTCCAAGGAA+TGG - chr1_1:57119003-57119022 None:intergenic 55.0%
TCATCAGAAGGGAGCCTCCA+AGG - chr1_1:57119008-57119027 None:intergenic 55.0%
! TCAGTGGGAGTGGGGACTTT+TGG - chr1_1:57119032-57119051 None:intergenic 55.0%
GCTTCTATGCAGACTTCGCG+AGG + chr1_1:57119611-57119630 Msa0030710:intron 55.0%
! ACTAGGGTTTAGAGCAGGGG+CGG + chr1_1:57119647-57119666 Msa0030710:intron 55.0%
AGCCAATTGGGCCTTGGGAT+TGG + chr1_1:57120769-57120788 Msa0030710:intron 55.0%
GCCAATTGGGCCTTGGGATT+GGG + chr1_1:57120770-57120789 Msa0030710:intron 55.0%
GATTGGGCAGTTGGGCTACT+GGG + chr1_1:57120786-57120805 Msa0030710:intron 55.0%
AGCCCCCACAATCATGTGAG+TGG + chr1_1:57120927-57120946 Msa0030710:intron 55.0%
CGGAGCCACTCACATGATTG+TGG - chr1_1:57120935-57120954 None:intergenic 55.0%
TGAGCTGGAGCAAGAAGTCC+TGG + chr1_1:57121816-57121835 Msa0030710:intron 55.0%
CGAAGGAGCTCCCTTGCAAA+TGG - chr1_1:57108092-57108111 None:intergenic 55.0%
!! CTCACAGGTGCTGGAGCCAT+TGG + chr1_1:57105470-57105489 Msa0030710:CDS 60.0%
TCGGTGGAAGTGACTGCACG+TGG - chr1_1:57106375-57106394 None:intergenic 60.0%
AAACCTGACTCCCACGCCGA+AGG - chr1_1:57108109-57108128 None:intergenic 60.0%
ATGACCGGCGAATCCCCTTC+AGG - chr1_1:57113338-57113357 None:intergenic 60.0%
TGGCCGCTTCACGGAGTTCA+AGG + chr1_1:57115178-57115197 Msa0030710:intron 60.0%
GGCCGCTTCACGGAGTTCAA+GGG + chr1_1:57115179-57115198 Msa0030710:intron 60.0%
CCAACGTGGCACAAGCCCAT+TGG - chr1_1:57116942-57116961 None:intergenic 60.0%
! CCAATGGGCTTGTGCCACGT+TGG + chr1_1:57116939-57116958 Msa0030710:intron 60.0%
TGCGCCAATGGCGTAGCTCT+CGG + chr1_1:57117077-57117096 Msa0030710:intron 60.0%
TGCTCCAGATCCTACGCCCA+AGG + chr1_1:57117151-57117170 Msa0030710:intron 60.0%
CGTACCTTGGGCGTAGGATC+TGG - chr1_1:57117158-57117177 None:intergenic 60.0%
ATGACCGGCGAATCCCTGTC+AGG - chr1_1:57117454-57117473 None:intergenic 60.0%
GCCCAATCCCAAGGCCCAAT+TGG - chr1_1:57120774-57120793 None:intergenic 60.0%
GGCCTTGGGATTGGGCAGTT+GGG + chr1_1:57120778-57120797 Msa0030710:intron 60.0%
AGCCCAACTGCCCAATCCCA+AGG - chr1_1:57120783-57120802 None:intergenic 60.0%
GGATTGGGCAGTTGGGCTAC+TGG + chr1_1:57120785-57120804 Msa0030710:intron 60.0%
ATACCTGACTCCCACGCCGA+AGG - chr1_1:57122003-57122022 None:intergenic 60.0%
CAAGGGAGCTCCTTCGGCGT+GGG + chr1_1:57108096-57108115 Msa0030710:CDS 65.0%
GCAGTGGGGGAAGGATGAGG+TGG + chr1_1:57108329-57108348 Msa0030710:intron 65.0%
GAAGCAGGGCAAGGCCAACG+TGG - chr1_1:57116956-57116975 None:intergenic 65.0%
CTACGCTCCAGGTGCGCCAA+TGG + chr1_1:57117065-57117084 Msa0030710:intron 65.0%
AGCTACGCCATTGGCGCACC+TGG - chr1_1:57117075-57117094 None:intergenic 65.0%
GCGCCAATGGCGTAGCTCTC+GGG + chr1_1:57117078-57117097 Msa0030710:intron 65.0%
GCTCCCGAGAGCTACGCCAT+TGG - chr1_1:57117084-57117103 None:intergenic 65.0%
! TTTAGAGCAGGGGCGGAGCC+AGG + chr1_1:57119654-57119673 Msa0030710:intron 65.0%
GGGCCTTGGGATTGGGCAGT+TGG + chr1_1:57120777-57120796 Msa0030710:intron 65.0%
TGGGCAGTTGGGCTACTGGG+TGG + chr1_1:57120789-57120808 Msa0030710:intron 65.0%
GGGCAGTTGGGCTACTGGGT+GGG + chr1_1:57120790-57120809 Msa0030710:intron 65.0%
TGGGCTACTGGGTGGGACTG+TGG + chr1_1:57120797-57120816 Msa0030710:intron 65.0%
GGGCTACTGGGTGGGACTGT+GGG + chr1_1:57120798-57120817 Msa0030710:intron 65.0%
CAAGGGAGCTCCTTCGGCGT+GGG + chr1_1:57108096-57108115 Msa0030710:CDS 65.0%
GCAAGGGAGCTCCTTCGGCG+TGG + chr1_1:57108095-57108114 Msa0030710:CDS 70.0%
GCTCCTTCGGCGTGGGAGTC+AGG + chr1_1:57108103-57108122 Msa0030710:CDS 70.0%
CATGTGAGTGGCTCCGCCCC+TGG + chr1_1:57120939-57120958 Msa0030710:intron 70.0%
GCAAGGGAGCTCCTTCGGCG+TGG + chr1_1:57108095-57108114 Msa0030710:CDS 70.0%
GCTCCTTCGGCGTGGGAGTC+AGG + chr1_1:57108103-57108122 Msa0030710:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 57105348 57124137 57105348 ID=Msa0030710;Name=Msa0030710
chr1_1 mRNA 57105348 57124137 57105348 ID=Msa0030710-mRNA-1;Parent=Msa0030710;Name=Msa0030710-mRNA-1;_AED=0.30;_eAED=0.30;_QI=79|0.77|0.86|1|0.77|0.73|23|107|772
chr1_1 exon 57105348 57105637 57105348 ID=Msa0030710-mRNA-1:exon:17212;Parent=Msa0030710-mRNA-1
chr1_1 exon 57106253 57106439 57106253 ID=Msa0030710-mRNA-1:exon:17213;Parent=Msa0030710-mRNA-1
chr1_1 exon 57106537 57106602 57106537 ID=Msa0030710-mRNA-1:exon:17214;Parent=Msa0030710-mRNA-1
chr1_1 exon 57106779 57106845 57106779 ID=Msa0030710-mRNA-1:exon:17215;Parent=Msa0030710-mRNA-1
chr1_1 exon 57106973 57107041 57106973 ID=Msa0030710-mRNA-1:exon:17216;Parent=Msa0030710-mRNA-1
chr1_1 exon 57107340 57107480 57107340 ID=Msa0030710-mRNA-1:exon:17217;Parent=Msa0030710-mRNA-1
chr1_1 exon 57107803 57107911 57107803 ID=Msa0030710-mRNA-1:exon:17218;Parent=Msa0030710-mRNA-1
chr1_1 exon 57108069 57108124 57108069 ID=Msa0030710-mRNA-1:exon:17219;Parent=Msa0030710-mRNA-1
chr1_1 exon 57108567 57108641 57108567 ID=Msa0030710-mRNA-1:exon:17220;Parent=Msa0030710-mRNA-1
chr1_1 exon 57108716 57108793 57108716 ID=Msa0030710-mRNA-1:exon:17221;Parent=Msa0030710-mRNA-1
chr1_1 exon 57108909 57108986 57108909 ID=Msa0030710-mRNA-1:exon:17222;Parent=Msa0030710-mRNA-1
chr1_1 exon 57109487 57109549 57109487 ID=Msa0030710-mRNA-1:exon:17223;Parent=Msa0030710-mRNA-1
chr1_1 exon 57109647 57109687 57109647 ID=Msa0030710-mRNA-1:exon:17224;Parent=Msa0030710-mRNA-1
chr1_1 exon 57112412 57112482 57112412 ID=Msa0030710-mRNA-1:exon:17225;Parent=Msa0030710-mRNA-1
chr1_1 exon 57118910 57119096 57118910 ID=Msa0030710-mRNA-1:exon:17226;Parent=Msa0030710-mRNA-1
chr1_1 exon 57119203 57119268 57119203 ID=Msa0030710-mRNA-1:exon:17227;Parent=Msa0030710-mRNA-1
chr1_1 exon 57119417 57119483 57119417 ID=Msa0030710-mRNA-1:exon:17228;Parent=Msa0030710-mRNA-1
chr1_1 exon 57121275 57121415 57121275 ID=Msa0030710-mRNA-1:exon:17229;Parent=Msa0030710-mRNA-1
chr1_1 exon 57121932 57122018 57121932 ID=Msa0030710-mRNA-1:exon:17230;Parent=Msa0030710-mRNA-1
chr1_1 exon 57122138 57122212 57122138 ID=Msa0030710-mRNA-1:exon:17231;Parent=Msa0030710-mRNA-1
chr1_1 exon 57122287 57122364 57122287 ID=Msa0030710-mRNA-1:exon:17232;Parent=Msa0030710-mRNA-1
chr1_1 exon 57123616 57123678 57123616 ID=Msa0030710-mRNA-1:exon:17233;Parent=Msa0030710-mRNA-1
chr1_1 exon 57123788 57124137 57123788 ID=Msa0030710-mRNA-1:exon:17234;Parent=Msa0030710-mRNA-1
chr1_1 five_prime_UTR 57105348 57105426 57105348 ID=Msa0030710-mRNA-1:five_prime_utr;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57105427 57105637 57105427 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57106253 57106439 57106253 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57106537 57106602 57106537 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57106779 57106845 57106779 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57106973 57107041 57106973 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57107340 57107480 57107340 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57107803 57107911 57107803 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57108069 57108124 57108069 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57108567 57108641 57108567 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57108716 57108793 57108716 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57108909 57108986 57108909 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57109487 57109549 57109487 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57109647 57109687 57109647 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57112412 57112482 57112412 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57118910 57119096 57118910 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57119203 57119268 57119203 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57119417 57119483 57119417 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57121275 57121415 57121275 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57121932 57122018 57121932 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57122138 57122212 57122138 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57122287 57122364 57122287 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57123616 57123678 57123616 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 CDS 57123788 57124030 57123788 ID=Msa0030710-mRNA-1:cds;Parent=Msa0030710-mRNA-1
chr1_1 three_prime_UTR 57124031 57124137 57124031 ID=Msa0030710-mRNA-1:three_prime_utr;Parent=Msa0030710-mRNA-1
Gene Sequence

>Msa0030710

ATGGAGAAAGTGAAACCGTTTATTATATTATCACCAACACAAACTCACAGGTGCTGGAGCCATTGGAATTGTATTCCTTCATCATCATCATCATCATTTCATTCACATTTTGTTTCTTTTACTCTTTCAACAACCTGCAGGGTTAACTCTCTGTTCCAACAACGTTGTATTCATCAATCAACACTAGCCAATCATCATTCCCAACCACTAGAAGAAGAAGTAATGGCAAGTAGTAGATCACAGTTGGTGAGATTTCCTTTATTGATGGATGATACTGATACTACCAAATACTCAGCATGCACCATTCCTTGGAGGTTCCCTTCTGATGATCCACGTGCAGTCACTTCCACCGAGTTATCTTGGATAAATCTCCTAGACAGTGGTATCCCCTCCTACAAGAAGCGTGCTGAGAGTGATACTTCTGTTCCTGATGCTGCAAATAAAGCTGAAATTTTTGCTCAAAGGTATGCTGAAATACTTGAAGATTTGAAGAAAGATCCTGCAAGTCATGGCGATCCTCTTGATATCCTTCTTCTATGTAGACTTCGTGAGGAAGTTCTTAAAGAACTGGGGTTCAGAGATATCTTCAAGAAAGTCAAGGCTGAAGAGAATGCAAAGGCAATCTCCCTATTTGAGAATGTTGTTTGTCTTAATGATGCTATTGAAGATGAAGGCAAGCGACTTGAGAATTTAGTTAGAGGAATTTTTGCAGGGAACGTATTTGATCTTGGTTCTCCCCAGCTTGCAGAAGCTTTCTCTAGGGATGGAATGTCGTTTTCGGCAACTTGTGAAAATCTTCTCCCTCGACCATGGATTATCGATGACCTTGACATTTTGAAAATCAGATGGAATATAATTTTAGGTATTTTGCCATTTGCAAGGGAGCTCCTTCGGCGTGGGAGTCAGGTTGTTTTGGCTGCTAATGACTTACCTTCTATCAATGATGTGACTTACTCTGAGCTAATTGAAATTATATCAAAGTTAAAGGATGAAGAAGGACGTCTCTTGGGTGTCAGCACTTCAAATCTTTTAATTGCCAACTCTGGAAATGATTTACCTGTTATTGATCTTACAAAGGTGTCACAAGAGCTTGCTTCCCTTACCAGTGATGTAGATCTTGTCATTTTAGAAGGGATGGGGCGCGGAATAGAAACAAATCTCTATGCTCAATTTAAATGTGATTCTATGAAGATTGCAATGGTGAAACATCCTGAGGTTGCAGAATTTCTTGAGTCACGGATGGTTAACTCTCTATCCCAACAACATTGCATTCATCAATCAGCACTAGCCAATCATCATTCCCAAACACTAGAAGAAGAAGCAATGGCAATTAGTACACCACAGTTGGTGAGATTCCCTTTGTTGATGGATGATACTGATACTACCAATTATTCAGCATGCACCATTCCTTGGAGGCTCCCTTCTGATGATCCAAAAGTCCCCACTCCCACTGAGTTATCTTGGATTAATCTCTTTTGCAGTGGTATCCCCTCCTACAAGAAGCGTGCTGAGAGTGATACTTCTGTTCCTGATGCTGCAAATAAAGCCGAAATTTATGCTCAAAGGTATGCTAAAATACTTGAAGATATGAAGAAAGATCCTGCAAGTCATGGAAATCCTCTTGATATCCTTAATGAAGAGAATGCAAAGGCCATCTCCCTATTTGAGAAAGTTGTTCGTCATAATGATGCAATTAAAGATGAAGGCAAGCGACTTGAGAATTTAGTTAGAGGAATTTTTGCGGGGAACGTATTTGATCTTGGTTCTCCCCAGGTTATCATATTTGTTGATAACTCTGGTGCAGATATTATTTTAGGTGTTTTGCCATTTGCAAGGGAGCTCCTTCGGCGTGGGAGTCAGGTTATTTTGGCTGCTAATGACTTACCTTCTATCAATGATGTGACTTATTCTGAGTTAATTGAAATTGTATCAAAGTTAAAGGATGAAGAAGGACGTCTCTTGGGTGTCAGCACTTCAAATCTATTAATTACTAACTCTGGAAATGATTTACCTGGTCGTGGAATAGAAACAAATTTCTATGCTCAATTTAAATGTGATTCTATGAAGATTGCAATGGTGAAAAATACCGGAGTTGCAAAATTTCTTAAATCGCGGATGTATGACTGTGTAATTAAATACGATGCAATTGTTGTTAAAATACCTATTAGAATCTTAAAATCCTACGATTTGCGATTTTGCTCTACCTTACTGATCTCAATCTTGAGTAGAATCCTAAAATATGCAAAACCCGTTCAAAATTGTTTATGTTTTAGTGATTTTTCTCTGCCTGATAATTGGCGTGTTCTTTATGTGATGTAG

Protein sequence

>Msa0030710

MEKVKPFIILSPTQTHRCWSHWNCIPSSSSSSFHSHFVSFTLSTTCRVNSLFQQRCIHQSTLANHHSQPLEEEVMASSRSQLVRFPLLMDDTDTTKYSACTIPWRFPSDDPRAVTSTELSWINLLDSGIPSYKKRAESDTSVPDAANKAEIFAQRYAEILEDLKKDPASHGDPLDILLLCRLREEVLKELGFRDIFKKVKAEENAKAISLFENVVCLNDAIEDEGKRLENLVRGIFAGNVFDLGSPQLAEAFSRDGMSFSATCENLLPRPWIIDDLDILKIRWNIILGILPFARELLRRGSQVVLAANDLPSINDVTYSELIEIISKLKDEEGRLLGVSTSNLLIANSGNDLPVIDLTKVSQELASLTSDVDLVILEGMGRGIETNLYAQFKCDSMKIAMVKHPEVAEFLESRMVNSLSQQHCIHQSALANHHSQTLEEEAMAISTPQLVRFPLLMDDTDTTNYSACTIPWRLPSDDPKVPTPTELSWINLFCSGIPSYKKRAESDTSVPDAANKAEIYAQRYAKILEDMKKDPASHGNPLDILNEENAKAISLFEKVVRHNDAIKDEGKRLENLVRGIFAGNVFDLGSPQVIIFVDNSGADIILGVLPFARELLRRGSQVILAANDLPSINDVTYSELIEIVSKLKDEEGRLLGVSTSNLLITNSGNDLPGRGIETNFYAQFKCDSMKIAMVKNTGVAKFLKSRMYDCVIKYDAIVVKIPIRILKSYDLRFCSTLLISILSRILKYAKPVQNCLCFSDFSLPDNWRVLYVM*