Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0043860 | 0.823735 | 1.180270e-53 | -8.615850e-47 |
| Msa0007850 | Msa0043860 | 0.823263 | 1.521784e-53 | -8.615850e-47 |
| Msa0008090 | Msa0043860 | 0.839815 | 1.264354e-57 | -8.615850e-47 |
| Msa0008200 | Msa0043860 | 0.808681 | 2.748335e-50 | -8.615850e-47 |
| Msa0020390 | Msa0043860 | 0.820423 | 6.915029e-53 | -8.615850e-47 |
| Msa0024110 | Msa0043860 | 0.801982 | 6.963478e-49 | -8.615850e-47 |
| Msa0027890 | Msa0043860 | 0.812440 | 4.235000e-51 | -8.615850e-47 |
| Msa0029260 | Msa0043860 | 0.831443 | 1.664251e-55 | -8.615850e-47 |
| Msa0030300 | Msa0043860 | 0.807888 | 4.057061e-50 | -8.615850e-47 |
| Msa0031820 | Msa0043860 | 0.832062 | 1.171353e-55 | -8.615850e-47 |
| Msa0033880 | Msa0043860 | 0.875270 | 3.516750e-68 | -8.615850e-47 |
| Msa0038000 | Msa0043860 | 0.819065 | 1.412106e-52 | -8.615850e-47 |
| Msa0038870 | Msa0043860 | 0.844291 | 8.279529e-59 | -8.615850e-47 |
| Msa0041690 | Msa0043860 | 0.823958 | 1.046269e-53 | -8.615850e-47 |
| Msa0043860 | Msa0046740 | 0.800746 | 1.246966e-48 | -8.615850e-47 |
| Msa0043860 | Msa0048180 | 0.821562 | 3.780824e-53 | -8.615850e-47 |
| Msa0043860 | Msa0055100 | 0.870463 | 1.432167e-66 | -8.615850e-47 |
| Msa0043860 | Msa0056270 | 0.810360 | 1.198301e-50 | -8.615850e-47 |
| Msa0043860 | Msa0057610 | 0.817331 | 3.485684e-52 | -8.615850e-47 |
| Msa0043860 | Msa0061970 | 0.848682 | 5.247276e-60 | -8.615850e-47 |
| Msa0043860 | Msa0068000 | 0.836975 | 6.828046e-57 | -8.615850e-47 |
| Msa0043860 | Msa0068020 | 0.883801 | 3.299860e-71 | -8.615850e-47 |
| Msa0043860 | Msa0070960 | 0.800068 | 1.714433e-48 | -8.615850e-47 |
| Msa0043860 | Msa0077010 | 0.825507 | 4.513310e-54 | -8.615850e-47 |
| Msa0043860 | Msa0077900 | 0.809660 | 1.695778e-50 | -8.615850e-47 |
| Msa0043860 | Msa0081650 | 0.830768 | 2.437940e-55 | -8.615850e-47 |
| Msa0043860 | Msa0091610 | 0.839834 | 1.250111e-57 | -8.615850e-47 |
| Msa0043860 | Msa0093010 | 0.833424 | 5.374693e-56 | -8.615850e-47 |
| Msa0043860 | Msa0097950 | 0.804229 | 2.388195e-49 | -8.615850e-47 |
| Msa0043860 | Msa0098740 | 0.810713 | 1.005446e-50 | -8.615850e-47 |
| Msa0043860 | Msa0101180 | 0.854489 | 1.189780e-61 | -8.615850e-47 |
| Msa0043860 | Msa0103240 | 0.821659 | 3.590653e-53 | -8.615850e-47 |
| Msa0043860 | Msa0108870 | 0.810336 | 1.212634e-50 | -8.615850e-47 |
| Msa0043860 | Msa0113130 | 0.810876 | 9.267445e-51 | -8.615850e-47 |
| Msa0043860 | Msa0113240 | 0.854863 | 9.270434e-62 | -8.615850e-47 |
| Msa0043860 | Msa0115370 | 0.860619 | 1.820776e-63 | -8.615850e-47 |
| Msa0043860 | Msa0121820 | 0.804231 | 2.385313e-49 | -8.615850e-47 |
| Msa0043860 | Msa0126770 | 0.839513 | 1.515300e-57 | -8.615850e-47 |
| Msa0043860 | Msa0126840 | 0.833501 | 5.142665e-56 | -8.615850e-47 |
| Msa0043860 | Msa0126880 | 0.808933 | 2.427775e-50 | -8.615850e-47 |
| Msa0043860 | Msa0127850 | 0.873527 | 1.372306e-67 | -8.615850e-47 |
| Msa0043860 | Msa0131590 | 0.803408 | 3.536900e-49 | -8.615850e-47 |
| Msa0043860 | Msa0136120 | 0.828461 | 8.876436e-55 | -8.615850e-47 |
| Msa0043860 | Msa0142110 | 0.810571 | 1.078639e-50 | -8.615850e-47 |
| Msa0043860 | Msa0145150 | 0.800018 | 1.754302e-48 | -8.615850e-47 |
| Msa0043860 | Msa0147980 | 0.824077 | 9.814415e-54 | -8.615850e-47 |
| Msa0043860 | Msa0159420 | 0.871570 | 6.180653e-67 | -8.615850e-47 |
| Msa0043860 | Msa0165950 | 0.827058 | 1.929112e-54 | -8.615850e-47 |
| Msa0043860 | Msa0166750 | 0.846261 | 2.427328e-59 | -8.615850e-47 |
| Msa0043860 | Msa0167480 | 0.822705 | 2.053138e-53 | -8.615850e-47 |
| Msa0043860 | Msa0167980 | 0.834411 | 3.045084e-56 | -8.615850e-47 |
| Msa0043860 | Msa0169300 | 0.830878 | 2.291716e-55 | -8.615850e-47 |
| Msa0043860 | Msa0171850 | 0.826664 | 2.396682e-54 | -8.615850e-47 |
| Msa0043860 | Msa0171940 | 0.814330 | 1.627944e-51 | -8.615850e-47 |
| Msa0043860 | Msa0174000 | 0.866159 | 3.495007e-65 | -8.615850e-47 |
| Msa0043860 | Msa0174770 | 0.801539 | 8.586661e-49 | -8.615850e-47 |
| Msa0043860 | Msa0177230 | 0.803713 | 3.057627e-49 | -8.615850e-47 |
| Msa0043860 | Msa0177960 | 0.800926 | 1.145730e-48 | -8.615850e-47 |
| Msa0043860 | Msa0190590 | 0.859755 | 3.321273e-63 | -8.615850e-47 |
| Msa0043860 | Msa0193600 | 0.802510 | 5.422649e-49 | -8.615850e-47 |
| Msa0043860 | Msa0204960 | 0.801261 | 9.785423e-49 | -8.615850e-47 |
| Msa0043860 | Msa0209080 | 0.820879 | 5.432094e-53 | -8.615850e-47 |
| Msa0043860 | Msa0217670 | 0.843362 | 1.468554e-58 | -8.615850e-47 |
| Msa0043860 | Msa0221600 | 0.853200 | 2.795602e-61 | -8.615850e-47 |
| Msa0043860 | Msa0226330 | 0.828269 | 9.876962e-55 | -8.615850e-47 |
| Msa0043860 | Msa0226460 | 0.810424 | 1.160789e-50 | -8.615850e-47 |
| Msa0043860 | Msa0231100 | 0.827113 | 1.871370e-54 | -8.615850e-47 |
| Msa0043860 | Msa0231790 | 0.806157 | 9.425250e-50 | -8.615850e-47 |
| Msa0043860 | Msa0233370 | 0.810828 | 9.491141e-51 | -8.615850e-47 |
| Msa0043860 | Msa0241830 | 0.830213 | 3.333431e-55 | -8.615850e-47 |
| Msa0043860 | Msa0244980 | 0.858852 | 6.198545e-63 | -8.615850e-47 |
| Msa0043860 | Msa0245060 | 0.845973 | 2.906946e-59 | -8.615850e-47 |
| Msa0043860 | Msa0245430 | 0.815886 | 7.344990e-52 | -8.615850e-47 |
| Msa0043860 | Msa0245580 | 0.830601 | 2.679485e-55 | -8.615850e-47 |
| Msa0043860 | Msa0257490 | 0.841823 | 3.762296e-58 | -8.615850e-47 |
| Msa0043860 | Msa0265340 | 0.813924 | 2.000259e-51 | -8.615850e-47 |
| Msa0043860 | Msa0269470 | 0.835519 | 1.600774e-56 | -8.615850e-47 |
| Msa0043860 | Msa0273650 | 0.806875 | 6.651621e-50 | -8.615850e-47 |
| Msa0043860 | Msa0275360 | 0.827674 | 1.373136e-54 | -8.615850e-47 |
| Msa0043860 | Msa0283420 | 0.846577 | 1.990272e-59 | -8.615850e-47 |
| Msa0043860 | Msa0291520 | 0.814587 | 1.428286e-51 | -8.615850e-47 |
| Msa0043860 | Msa0295590 | 0.802447 | 5.586367e-49 | -8.615850e-47 |
| Msa0043860 | Msa0296250 | 0.835039 | 2.115901e-56 | -8.615850e-47 |
| Msa0043860 | Msa0296790 | 0.869759 | 2.434140e-66 | -8.615850e-47 |
| Msa0043860 | Msa0296920 | 0.809644 | 1.708507e-50 | -8.615850e-47 |
| Msa0043860 | Msa0304590 | 0.831140 | 1.976331e-55 | -8.615850e-47 |
| Msa0043860 | Msa0304660 | 0.841008 | 6.166022e-58 | -8.615850e-47 |
| Msa0043860 | Msa0311720 | 0.841727 | 3.987662e-58 | -8.615850e-47 |
| Msa0043860 | Msa0321690 | 0.814546 | 1.457923e-51 | -8.615850e-47 |
| Msa0043860 | Msa0331700 | 0.840137 | 1.041876e-57 | -8.615850e-47 |
| Msa0043860 | Msa0339910 | 0.819893 | 9.144257e-53 | -8.615850e-47 |
| Msa0043860 | Msa0348830 | 0.811170 | 8.005386e-51 | -8.615850e-47 |
| Msa0043860 | Msa0358770 | 0.867439 | 1.367719e-65 | -8.615850e-47 |
| Msa0043860 | Msa0363060 | 0.849226 | 3.705249e-60 | -8.615850e-47 |
| Msa0043860 | Msa0363640 | 0.803144 | 4.009805e-49 | -8.615850e-47 |
| Msa0043860 | Msa0376820 | 0.822923 | 1.826752e-53 | -8.615850e-47 |
| Msa0043860 | Msa0384670 | 0.822254 | 2.613329e-53 | -8.615850e-47 |
| Msa0043860 | Msa0384880 | 0.832309 | 1.017714e-55 | -8.615850e-47 |
| Msa0043860 | Msa0385500 | 0.853196 | 2.804542e-61 | -8.615850e-47 |
| Msa0043860 | Msa0387470 | 0.800745 | 1.247851e-48 | -8.615850e-47 |
| Msa0043860 | Msa0389510 | 0.855601 | 5.654456e-62 | -8.615850e-47 |
| Msa0043860 | Msa0416960 | 0.820317 | 7.310903e-53 | -8.615850e-47 |
| Msa0043860 | Msa0419520 | 0.802750 | 4.837149e-49 | -8.615850e-47 |
| Msa0043860 | Msa0419720 | 0.802000 | 6.905582e-49 | -8.615850e-47 |
| Msa0043860 | Msa0423750 | 0.831351 | 1.753249e-55 | -8.615850e-47 |
| Msa0043860 | Msa0427860 | -0.817827 | 2.694215e-52 | -8.615850e-47 |
| Msa0043860 | Msa0432500 | 0.822287 | 2.567998e-53 | -8.615850e-47 |
| Msa0043860 | Msa0434570 | 0.812546 | 4.014660e-51 | -8.615850e-47 |
| Msa0043860 | Msa0434770 | 0.819482 | 1.134777e-52 | -8.615850e-47 |
| Msa0043860 | Msa0435220 | 0.817267 | 3.603644e-52 | -8.615850e-47 |
| Msa0043860 | Msa0443390 | 0.829797 | 4.209590e-55 | -8.615850e-47 |
| Msa0043860 | Msa0450140 | 0.828779 | 7.437756e-55 | -8.615850e-47 |
| Msa0043860 | Msa0456430 | 0.818965 | 1.488610e-52 | -8.615850e-47 |
| Msa0043860 | Msa0458640 | 0.804433 | 2.165547e-49 | -8.615850e-47 |
| Msa0043860 | Msa0472130 | 0.820170 | 7.902022e-53 | -8.615850e-47 |
| Msa0043860 | Msa0474090 | -0.815318 | 9.828612e-52 | -8.615850e-47 |
| Msa0043860 | Msa0478580 | 0.831641 | 1.488005e-55 | -8.615850e-47 |
| Msa0043860 | Msa0479330 | 0.827248 | 1.737377e-54 | -8.615850e-47 |
| Msa0043860 | Msa0481480 | 0.807456 | 5.011513e-50 | -8.615850e-47 |
| Msa0043860 | Msa0484740 | 0.846373 | 2.262455e-59 | -8.615850e-47 |
| Msa0043860 | Msa0485710 | 0.819029 | 1.439379e-52 | -8.615850e-47 |
| Msa0043860 | Msa0491000 | 0.809187 | 2.141545e-50 | -8.615850e-47 |
| Msa0043860 | Msa0498560 | 0.800265 | 1.562874e-48 | -8.615850e-47 |
| Msa0043860 | Msa0506400 | 0.808035 | 3.773935e-50 | -8.615850e-47 |
| Msa0043860 | Msa0509120 | 0.834020 | 3.814929e-56 | -8.615850e-47 |
| Msa0043860 | Msa0511770 | 0.851283 | 9.813974e-61 | -8.615850e-47 |
| Msa0043860 | Msa0531250 | 0.823864 | 1.101014e-53 | -8.615850e-47 |
| Msa0043860 | Msa0534750 | 0.825274 | 5.124434e-54 | -8.615850e-47 |
| Msa0043860 | Msa0542560 | 0.819184 | 1.327167e-52 | -8.615850e-47 |
| Msa0043860 | Msa0544540 | 0.804576 | 2.021290e-49 | -8.615850e-47 |
| Msa0043860 | Msa0547160 | 0.816807 | 4.571101e-52 | -8.615850e-47 |
| Msa0043860 | Msa0547990 | 0.814451 | 1.530769e-51 | -8.615850e-47 |
| Msa0043860 | Msa0550540 | 0.819016 | 1.448903e-52 | -8.615850e-47 |
| Msa0043860 | Msa0550570 | 0.833442 | 5.321665e-56 | -8.615850e-47 |
| Msa0043860 | Msa0561430 | 0.803338 | 3.656006e-49 | -8.615850e-47 |
| Msa0043860 | Msa0580230 | 0.864329 | 1.314898e-64 | -8.615850e-47 |
| Msa0043860 | Msa0580280 | 0.850716 | 1.418810e-60 | -8.615850e-47 |
| Msa0043860 | Msa0581070 | 0.819546 | 1.097344e-52 | -8.615850e-47 |
| Msa0043860 | Msa0581110 | 0.808529 | 2.962218e-50 | -8.615850e-47 |
| Msa0043860 | Msa0588090 | 0.813374 | 2.644152e-51 | -8.615850e-47 |
| Msa0043860 | Msa0593700 | 0.861675 | 8.681392e-64 | -8.615850e-47 |
| Msa0043860 | Msa0600450 | 0.801463 | 8.898400e-49 | -8.615850e-47 |
| Msa0043860 | Msa0603570 | 0.808570 | 2.902307e-50 | -8.615850e-47 |
| Msa0043860 | Msa0609000 | 0.827301 | 1.687413e-54 | -8.615850e-47 |
| Msa0043860 | Msa0610390 | 0.814924 | 1.202704e-51 | -8.615850e-47 |
| Msa0043860 | Msa0610550 | 0.812085 | 5.061647e-51 | -8.615850e-47 |
| Msa0043860 | Msa0614510 | 0.803532 | 3.332560e-49 | -8.615850e-47 |
| Msa0043860 | Msa0615580 | 0.809573 | 1.770273e-50 | -8.615850e-47 |
| Msa0043860 | Msa0618930 | 0.800878 | 1.172019e-48 | -8.615850e-47 |
| Msa0043860 | Msa0619860 | 0.830489 | 2.854179e-55 | -8.615850e-47 |
| Msa0043860 | Msa0619920 | 0.815512 | 8.899095e-52 | -8.615850e-47 |
| Msa0043860 | Msa0628420 | 0.830739 | 2.478115e-55 | -8.615850e-47 |
| Msa0043860 | Msa0631250 | 0.803452 | 3.463282e-49 | -8.615850e-47 |
| Msa0043860 | Msa0631350 | 0.803710 | 3.061877e-49 | -8.615850e-47 |
| Msa0043860 | Msa0633570 | 0.858057 | 1.069592e-62 | -8.615850e-47 |
| Msa0043860 | Msa0642970 | 0.806340 | 8.628097e-50 | -8.615850e-47 |
| Msa0043860 | Msa0644030 | 0.805226 | 1.478438e-49 | -8.615850e-47 |
| Msa0043860 | Msa0647930 | 0.809473 | 1.859540e-50 | -8.615850e-47 |
| Msa0043860 | Msa0647950 | 0.803690 | 3.091142e-49 | -8.615850e-47 |
| Msa0043860 | Msa0656960 | 0.803478 | 3.419840e-49 | -8.615850e-47 |
| Msa0043860 | Msa0659790 | 0.809935 | 1.479642e-50 | -8.615850e-47 |
| Msa0043860 | Msa0659990 | 0.816559 | 5.195682e-52 | -8.615850e-47 |
| Msa0043860 | Msa0662630 | 0.845395 | 4.171698e-59 | -8.615850e-47 |
| Msa0043860 | Msa0666230 | 0.852517 | 4.384066e-61 | -8.615850e-47 |
| Msa0043860 | Msa0669720 | 0.804410 | 2.189133e-49 | -8.615850e-47 |
| Msa0043860 | Msa0669760 | 0.804800 | 1.814899e-49 | -8.615850e-47 |
| Msa0043860 | Msa0672100 | 0.830895 | 2.269009e-55 | -8.615850e-47 |
| Msa0043860 | Msa0679100 | 0.808399 | 3.156503e-50 | -8.615850e-47 |
| Msa0043860 | Msa0679360 | 0.804293 | 2.315767e-49 | -8.615850e-47 |
| Msa0043860 | Msa0683780 | 0.830684 | 2.556802e-55 | -8.615850e-47 |
| Msa0043860 | Msa0689500 | 0.833186 | 6.161310e-56 | -8.615850e-47 |
| Msa0043860 | Msa0690770 | 0.816135 | 6.465428e-52 | -8.615850e-47 |
| Msa0043860 | Msa0691690 | 0.815647 | 8.306426e-52 | -8.615850e-47 |
| Msa0043860 | Msa0692940 | 0.807240 | 5.567074e-50 | -8.615850e-47 |
| Msa0043860 | Msa0693210 | 0.874585 | 6.020283e-68 | -8.615850e-47 |
| Msa0043860 | Msa0694840 | 0.804894 | 1.735238e-49 | -8.615850e-47 |
| Msa0043860 | Msa0697080 | 0.807440 | 5.050806e-50 | -8.615850e-47 |
| Msa0043860 | Msa0697720 | 0.847257 | 1.296480e-59 | -8.615850e-47 |
| Msa0043860 | Msa0699190 | 0.862086 | 6.502048e-64 | -8.615850e-47 |
| Msa0043860 | Msa0704660 | 0.815919 | 7.222459e-52 | -8.615850e-47 |
| Msa0043860 | Msa0705390 | 0.802510 | 5.422649e-49 | -8.615850e-47 |
| Msa0043860 | Msa0706390 | 0.804983 | 1.662134e-49 | -8.615850e-47 |
| Msa0043860 | Msa0743530 | 0.814929 | 1.199256e-51 | -8.615850e-47 |
| Msa0043860 | Msa0752700 | 0.817677 | 2.912407e-52 | -8.615850e-47 |
| Msa0043860 | Msa0780880 | 0.822244 | 2.627075e-53 | -8.615850e-47 |
| Msa0043860 | Msa0780930 | 0.812454 | 4.204793e-51 | -8.615850e-47 |
| Msa0043860 | Msa0781270 | 0.829067 | 6.333447e-55 | -8.615850e-47 |
| Msa0043860 | Msa0786750 | 0.806539 | 7.833421e-50 | -8.615850e-47 |
| Msa0043860 | Msa0794970 | 0.810082 | 1.375886e-50 | -8.615850e-47 |
| Msa0043860 | Msa0808800 | 0.832742 | 7.947213e-56 | -8.615850e-47 |
| Msa0043860 | Msa0818770 | 0.803909 | 2.783610e-49 | -8.615850e-47 |
| Msa0043860 | Msa0822170 | 0.843511 | 1.339269e-58 | -8.615850e-47 |
| Msa0043860 | Msa0822180 | 0.874147 | 8.477245e-68 | -8.615850e-47 |
| Msa0043860 | Msa0822310 | -0.801738 | 7.816426e-49 | -8.615850e-47 |
| Msa0043860 | Msa0827280 | 0.802811 | 4.700112e-49 | -8.615850e-47 |
| Msa0043860 | Msa0828680 | 0.841348 | 5.019004e-58 | -8.615850e-47 |
| Msa0043860 | Msa0829220 | 0.855245 | 7.181751e-62 | -8.615850e-47 |
| Msa0043860 | Msa0831100 | 0.814919 | 1.205443e-51 | -8.615850e-47 |
| Msa0043860 | Msa0833190 | -0.819694 | 1.015363e-52 | -8.615850e-47 |
| Msa0043860 | Msa0838370 | 0.845024 | 5.255067e-59 | -8.615850e-47 |
| Msa0043860 | Msa0858440 | 0.862422 | 5.124196e-64 | -8.615850e-47 |
| Msa0043860 | Msa0880450 | 0.823007 | 1.745866e-53 | -8.615850e-47 |
| Msa0043860 | Msa0897200 | 0.804545 | 2.052141e-49 | -8.615850e-47 |
| Msa0043860 | Msa0897400 | 0.809136 | 2.196807e-50 | -8.615850e-47 |
| Msa0043860 | Msa0913240 | 0.826907 | 2.096811e-54 | -8.615850e-47 |
| Msa0043860 | Msa0921870 | 0.821523 | 3.859757e-53 | -8.615850e-47 |
| Msa0043860 | Msa0943170 | 0.852085 | 5.818816e-61 | -8.615850e-47 |
| Msa0043860 | Msa0944200 | 0.817758 | 2.792975e-52 | -8.615850e-47 |
| Msa0043860 | Msa0959910 | 0.808258 | 3.383583e-50 | -8.615850e-47 |
| Msa0043860 | Msa0960830 | 0.832593 | 8.651551e-56 | -8.615850e-47 |
| Msa0043860 | Msa0963020 | 0.858386 | 8.537141e-63 | -8.615850e-47 |
| Msa0043860 | Msa0968440 | 0.801238 | 9.896394e-49 | -8.615850e-47 |
| Msa0043860 | Msa0973320 | 0.807020 | 6.198600e-50 | -8.615850e-47 |
| Msa0043860 | Msa0980540 | 0.809862 | 1.533789e-50 | -8.615850e-47 |
| Msa0043860 | Msa0980940 | 0.814189 | 1.749039e-51 | -8.615850e-47 |
| Msa0043860 | Msa0994290 | 0.848941 | 4.445021e-60 | -8.615850e-47 |
| Msa0043860 | Msa1019240 | 0.801619 | 8.266027e-49 | -8.615850e-47 |
| Msa0043860 | Msa1025940 | 0.846057 | 2.758902e-59 | -8.615850e-47 |
| Msa0043860 | Msa1029970 | 0.815379 | 9.529047e-52 | -8.615850e-47 |
| Msa0043860 | Msa1037520 | 0.811122 | 8.198960e-51 | -8.615850e-47 |
| Msa0043860 | Msa1039900 | 0.815468 | 9.102408e-52 | -8.615850e-47 |
| Msa0043860 | Msa1070390 | 0.818454 | 1.943399e-52 | -8.615850e-47 |
| Msa0043860 | Msa1083880 | 0.843304 | 1.521522e-58 | -8.615850e-47 |
| Msa0043860 | Msa1089320 | 0.814155 | 1.779538e-51 | -8.615850e-47 |
| Msa0043860 | Msa1123350 | 0.814252 | 1.693917e-51 | -8.615850e-47 |
| Msa0043860 | Msa1126830 | 0.810138 | 1.337734e-50 | -8.615850e-47 |
| Msa0043860 | Msa1131490 | 0.805866 | 1.085381e-49 | -8.615850e-47 |
| Msa0043860 | Msa1131560 | 0.803984 | 2.684737e-49 | -8.615850e-47 |
| Msa0043860 | Msa1135810 | -0.820114 | 8.136338e-53 | -8.615850e-47 |
| Msa0043860 | Msa1154490 | 0.808741 | 2.667782e-50 | -8.615850e-47 |
| Msa0043860 | Msa1165780 | 0.833319 | 5.711227e-56 | -8.615850e-47 |
| Msa0043860 | Msa1166870 | 0.824347 | 8.478142e-54 | -8.615850e-47 |
| Msa0043860 | Msa1171830 | 0.808240 | 3.412988e-50 | -8.615850e-47 |
| Msa0043860 | Msa1175350 | 0.811239 | 7.733185e-51 | -8.615850e-47 |
| Msa0043860 | Msa1176360 | 0.806422 | 8.290942e-50 | -8.615850e-47 |
| Msa0043860 | Msa1178580 | 0.800394 | 1.471458e-48 | -8.615850e-47 |
| Msa0043860 | Msa1179950 | 0.838088 | 3.539603e-57 | -8.615850e-47 |
| Msa0043860 | Msa1179980 | 0.854048 | 1.595462e-61 | -8.615850e-47 |
| Msa0043860 | Msa1184370 | 0.843976 | 1.005995e-58 | -8.615850e-47 |
| Msa0043860 | Msa1192850 | 0.800222 | 1.594893e-48 | -8.615850e-47 |
| Msa0043860 | Msa1201830 | 0.801712 | 7.909845e-49 | -8.615850e-47 |
| Msa0043860 | Msa1202580 | 0.850257 | 1.908340e-60 | -8.615850e-47 |
| Msa0043860 | Msa1205590 | 0.805712 | 1.169127e-49 | -8.615850e-47 |
| Msa0043860 | Msa1206650 | 0.847344 | 1.227199e-59 | -8.615850e-47 |
| Msa0043860 | Msa1207730 | 0.804656 | 1.945448e-49 | -8.615850e-47 |
| Msa0043860 | Msa1208020 | 0.818833 | 1.595051e-52 | -8.615850e-47 |
| Msa0043860 | Msa1211830 | 0.816463 | 5.458561e-52 | -8.615850e-47 |
| Msa0043860 | Msa1227690 | 0.858048 | 1.076065e-62 | -8.615850e-47 |
| Msa0043860 | Msa1233850 | 0.826589 | 2.496540e-54 | -8.615850e-47 |
| Msa0043860 | Msa1253810 | 0.804278 | 2.332164e-49 | -8.615850e-47 |
| Msa0043860 | Msa1256770 | 0.861833 | 7.769043e-64 | -8.615850e-47 |
| Msa0043860 | Msa1270620 | 0.844028 | 9.742139e-59 | -8.615850e-47 |
| Msa0043860 | Msa1270690 | 0.852913 | 3.377616e-61 | -8.615850e-47 |
| Msa0043860 | Msa1276150 | 0.800513 | 1.391143e-48 | -8.615850e-47 |
| Msa0043860 | Msa1276970 | 0.801993 | 6.926265e-49 | -8.615850e-47 |
| Msa0043860 | Msa1278900 | 0.833045 | 6.680071e-56 | -8.615850e-47 |
| Msa0043860 | Msa1279590 | 0.804887 | 1.740801e-49 | -8.615850e-47 |
| Msa0043860 | Msa1294840 | 0.823050 | 1.706050e-53 | -8.615850e-47 |
| Msa0043860 | Msa1295110 | 0.824884 | 6.335467e-54 | -8.615850e-47 |
| Msa0043860 | Msa1296830 | 0.803857 | 2.853233e-49 | -8.615850e-47 |
| Msa0043860 | Msa1298050 | 0.843504 | 1.345566e-58 | -8.615850e-47 |
| Msa0043860 | Msa1299700 | 0.814420 | 1.554511e-51 | -8.615850e-47 |
| Msa0043860 | Msa1306990 | 0.833971 | 3.924490e-56 | -8.615850e-47 |
| Msa0043860 | Msa1307180 | 0.822672 | 2.089477e-53 | -8.615850e-47 |
| Msa0043860 | Msa1310690 | 0.808626 | 2.824285e-50 | -8.615850e-47 |
| Msa0043860 | Msa1316360 | 0.831374 | 1.730877e-55 | -8.615850e-47 |
| Msa0043860 | Msa1329450 | 0.803751 | 3.002138e-49 | -8.615850e-47 |
| Msa0043860 | Msa1331250 | 0.823052 | 1.704719e-53 | -8.615850e-47 |
| Msa0043860 | Msa1331350 | 0.812646 | 3.818464e-51 | -8.615850e-47 |
| Msa0043860 | Msa1331710 | 0.812460 | 4.193225e-51 | -8.615850e-47 |
| Msa0043860 | Msa1332220 | 0.811846 | 5.708347e-51 | -8.615850e-47 |
| Msa0043860 | Msa1344310 | 0.837822 | 4.141778e-57 | -8.615850e-47 |
| Msa0043860 | Msa1345450 | 0.818124 | 2.308789e-52 | -8.615850e-47 |
| Msa0043860 | Msa1351540 | 0.805934 | 1.050103e-49 | -8.615850e-47 |
| Msa0043860 | Msa1352890 | 0.827878 | 1.226728e-54 | -8.615850e-47 |
| Msa0043860 | Msa1356610 | 0.802376 | 5.777247e-49 | -8.615850e-47 |
| Msa0043860 | Msa1362420 | 0.846397 | 2.228719e-59 | -8.615850e-47 |
| Msa0043860 | Msa1363860 | 0.822403 | 2.413748e-53 | -8.615850e-47 |
| Msa0043860 | Msa1364210 | 0.816706 | 4.815246e-52 | -8.615850e-47 |
| Msa0043860 | Msa1369190 | 0.842724 | 2.170694e-58 | -8.615850e-47 |
| Msa0043860 | Msa1370590 | 0.801722 | 7.872448e-49 | -8.615850e-47 |
| Msa0043860 | Msa1373820 | 0.821845 | 3.251289e-53 | -8.615850e-47 |
| Msa0043860 | Msa1389680 | 0.801759 | 7.736812e-49 | -8.615850e-47 |
| Msa0043860 | Msa1389850 | 0.840922 | 6.492571e-58 | -8.615850e-47 |
| Msa0043860 | Msa1396870 | 0.806362 | 8.533689e-50 | -8.615850e-47 |
| Msa0043860 | Msa1401950 | 0.800939 | 1.139096e-48 | -8.615850e-47 |
| Msa0043860 | Msa1411950 | 0.842108 | 3.161471e-58 | -8.615850e-47 |
| Msa0043860 | Msa1413260 | 0.804755 | 1.854818e-49 | -8.615850e-47 |
| Msa0043860 | Msa1416260 | 0.807051 | 6.104226e-50 | -8.615850e-47 |
| Msa0043860 | Msa1425670 | 0.810075 | 1.380191e-50 | -8.615850e-47 |
| Msa0043860 | Msa1432480 | 0.807750 | 4.339061e-50 | -8.615850e-47 |
| Msa0043860 | Msa1433600 | 0.814845 | 1.252055e-51 | -8.615850e-47 |
| Msa0043860 | Msa1435770 | 0.822448 | 2.355913e-53 | -8.615850e-47 |
| Msa0043860 | Msa1442850 | 0.812064 | 5.115688e-51 | -8.615850e-47 |
| Msa0043860 | Msa1447890 | 0.800802 | 1.214910e-48 | -8.615850e-47 |
| Msa0043860 | Msa1450280 | 0.830308 | 3.159674e-55 | -8.615850e-47 |
| Msa0043860 | Msa1456050 | 0.810267 | 1.255085e-50 | -8.615850e-47 |
| Msa0043860 | Msa1458290 | 0.825500 | 4.531950e-54 | -8.615850e-47 |
| Msa0043860 | Msa1459960 | 0.808132 | 3.598664e-50 | -8.615850e-47 |
| Msa0043860 | Msa1462470 | 0.805604 | 1.232029e-49 | -8.615850e-47 |
| Msa0043860 | Msa1462860 | 0.825240 | 5.220212e-54 | -8.615850e-47 |
| Msa0043860 | Msa1465080 | 0.832136 | 1.122839e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043860 | MtrunA17_Chr1g0210481 | 96.471 | 85 | 3 | 0 | 1 | 85 | 57 | 141 | 3.35e-56 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043860 | AT5G04750.1 | 57.143 | 70 | 24 | 4 | 13 | 80 | 25 | 90 | 5.53e-14 | 61.6 |
Find 51 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAGTTGAGGAGGGAGTT+TGG | 0.243867 | 1_1:-75348705 | Msa0043860:three_prime_UTR |
| TCGAAGCTACTCTCAATTCT+AGG | 0.308350 | 1_1:-75348673 | Msa0043860:three_prime_UTR |
| ATAATTTGGTACCTTGTTAT+CGG | 0.335217 | 1_1:+75350631 | None:intergenic |
| TCATGTAGAACTGTTCGATT+TGG | 0.346117 | 1_1:-75348552 | Msa0043860:three_prime_UTR |
| TTGGTTGCATCCATCATGTT+TGG | 0.357165 | 1_1:-75348894 | Msa0043860:three_prime_UTR |
| CTAGCCGTCAAGGTCACTTA+AGG | 0.384006 | 1_1:-75349036 | Msa0043860:three_prime_UTR |
| ATGCATGTGATGTGAGCATT+AGG | 0.389168 | 1_1:+75348645 | None:intergenic |
| TCACATGCATATAAAATTGT+TGG | 0.391346 | 1_1:-75348632 | Msa0043860:three_prime_UTR |
| CAAAGAAAACGTCTACATTC+AGG | 0.413338 | 1_1:-75350808 | Msa0043860:intron |
| GAAATGGGAGAGGGAAAGGT+TGG | 0.423182 | 1_1:-75350708 | Msa0043860:CDS |
| TTTATTTGTAGTTTCGTCAA+TGG | 0.432771 | 1_1:-75348933 | Msa0043860:three_prime_UTR |
| TGCATGTGATGTGAGCATTA+GGG | 0.448966 | 1_1:+75348646 | None:intergenic |
| AGGGATCGTGACTCGTTCAA+TGG | 0.456515 | 1_1:-75350904 | Msa0043860:CDS |
| CAGCTAGGCTGACCTTAGAT+TGG | 0.463289 | 1_1:+75348577 | None:intergenic |
| GGAGTCTTAGCTCCAATCTA+AGG | 0.465363 | 1_1:-75348589 | Msa0043860:three_prime_UTR |
| ACAGAAGCTAGCTGCTGATA+AGG | 0.476602 | 1_1:-75350681 | Msa0043860:CDS |
| CTTCCCTTAAGTGACCTTGA+CGG | 0.483822 | 1_1:+75349032 | None:intergenic |
| TAGCCGTCAAGGTCACTTAA+GGG | 0.484955 | 1_1:-75349035 | Msa0043860:three_prime_UTR |
| TTGTTATCGGCATTATCTGT+AGG | 0.488471 | 1_1:+75350644 | None:intergenic |
| TATTGAGATTCAGTTGAGGA+GGG | 0.492764 | 1_1:-75348712 | Msa0043860:three_prime_UTR |
| ATCGGTCTTGCTAGCCGTCA+AGG | 0.499625 | 1_1:-75349046 | Msa0043860:three_prime_UTR |
| TGGTGATGAATCAGACCATT+TGG | 0.503841 | 1_1:-75348913 | Msa0043860:three_prime_UTR |
| GATTCAGTCTTGTAATGAAA+GGG | 0.504362 | 1_1:-75348610 | Msa0043860:three_prime_UTR |
| ATTTGAATGTAGAAACCTGA+TGG | 0.520627 | 1_1:-75349089 | Msa0043860:intron |
| GGATTCAGTCTTGTAATGAA+AGG | 0.523053 | 1_1:-75348611 | Msa0043860:three_prime_UTR |
| ATATTGAGATTCAGTTGAGG+AGG | 0.524048 | 1_1:-75348713 | Msa0043860:three_prime_UTR |
| TCTCGCTTCTTCAGCGGCAA+AGG | 0.525127 | 1_1:-75350858 | Msa0043860:CDS |
| ACATGATGGATGCAACCAAA+TGG | 0.527793 | 1_1:+75348898 | None:intergenic |
| CCAGCCCAGTAAAATATCAC+AGG | 0.534808 | 1_1:+75348845 | None:intergenic |
| TTTGTGTGTAGAAATGGGAG+AGG | 0.537501 | 1_1:-75350718 | Msa0043860:intron |
| TCTTGCTAAATAAAAGAGCT+AGG | 0.543420 | 1_1:-75348503 | Msa0043860:three_prime_UTR |
| TTGTGTGTAGAAATGGGAGA+GGG | 0.546268 | 1_1:-75350717 | Msa0043860:intron |
| TGTAGAAATGGGAGAGGGAA+AGG | 0.549281 | 1_1:-75350712 | Msa0043860:intron |
| ACATAATGTACCAAACATGA+TGG | 0.562912 | 1_1:+75348884 | None:intergenic |
| ATGTGATTGCGATGAACCGC+TGG | 0.569547 | 1_1:+75350979 | None:intergenic |
| GCTAGCTGCTGATAAGGCTA+AGG | 0.570411 | 1_1:-75350675 | Msa0043860:CDS |
| CAGTTCTACATGAATCAGCT+AGG | 0.588882 | 1_1:+75348562 | None:intergenic |
| TACAGATAATGCCGATAACA+AGG | 0.591322 | 1_1:-75350642 | Msa0043860:intron |
| CCAGTAAAATATCACAGGGA+AGG | 0.592299 | 1_1:+75348850 | None:intergenic |
| TTTGAATGTAGAAACCTGAT+GGG | 0.600438 | 1_1:-75349088 | Msa0043860:intron |
| TCAATGGATTCAACATCTCG+TGG | 0.600776 | 1_1:-75350888 | Msa0043860:CDS |
| TGAGATCAGCACTGAGTCGA+GGG | 0.604557 | 1_1:-75350923 | Msa0043860:CDS |
| ATGAGATCAGCACTGAGTCG+AGG | 0.608842 | 1_1:-75350924 | Msa0043860:CDS |
| AGCTGCTGATAAGGCTAAGG+CGG | 0.613160 | 1_1:-75350672 | Msa0043860:CDS |
| GCTTCTTCTCGCTTCTTCAG+CGG | 0.618308 | 1_1:-75350864 | Msa0043860:CDS |
| GCATGTGATGTGAGCATTAG+GGG | 0.628230 | 1_1:+75348647 | None:intergenic |
| CAAAGGTAAGATTCTTAGCG+AGG | 0.644514 | 1_1:-75350841 | Msa0043860:CDS |
| CAGCCCAGTAAAATATCACA+GGG | 0.644544 | 1_1:+75348846 | None:intergenic |
| TGGATATTGAGATTCAGTTG+AGG | 0.669746 | 1_1:-75348716 | Msa0043860:three_prime_UTR |
| ACTTAAGGGAAGCAATCATG+AGG | 0.694142 | 1_1:-75349021 | Msa0043860:three_prime_UTR |
| ATGTAATGTGAGTTTCACTG+TGG | 0.776960 | 1_1:-75348736 | Msa0043860:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAATATGTCATATA+TGG | - | chr1_1:75350211-75350230 | Msa0043860:intron | 10.0% |
| !!! | TACCAAATTATTTTGTTTTT+AGG | - | chr1_1:75348853-75348872 | Msa0043860:three_prime_UTR | 15.0% |
| !! | AACCTAAAAACAAAATAATT+TGG | + | chr1_1:75348858-75348877 | None:intergenic | 15.0% |
| !!! | ATATTTCTTTATGCATATTT+TGG | - | chr1_1:75348888-75348907 | Msa0043860:three_prime_UTR | 15.0% |
| !!! | TATTTCTTTATGCATATTTT+GGG | - | chr1_1:75348889-75348908 | Msa0043860:three_prime_UTR | 15.0% |
| !!! | AATTTTAAGATATGAATCAT+AGG | + | chr1_1:75349089-75349108 | None:intergenic | 15.0% |
| !!! | TAATTTTGATATGAATATGA+TGG | - | chr1_1:75349177-75349196 | Msa0043860:intron | 15.0% |
| !!! | AATTTTAAAAGTGAAGAATT+TGG | + | chr1_1:75349899-75349918 | None:intergenic | 15.0% |
| !! | ATAATAATAGATCACAAATC+TGG | + | chr1_1:75348926-75348945 | None:intergenic | 20.0% |
| !!! | TTTGAAATTGTATCATATGA+TGG | - | chr1_1:75349061-75349080 | Msa0043860:exon | 20.0% |
| !! | AAAATTTAAGAAGCTAAAAG+TGG | + | chr1_1:75349221-75349240 | None:intergenic | 20.0% |
| !!! | ACTTTTAGCTTCTTAAATTT+TGG | - | chr1_1:75349220-75349239 | Msa0043860:intron | 20.0% |
| !!! | CTTTTAGCTTCTTAAATTTT+GGG | - | chr1_1:75349221-75349240 | Msa0043860:intron | 20.0% |
| !! | GCTTAAGATAATAATCTAAA+GGG | - | chr1_1:75350092-75350111 | Msa0043860:intron | 20.0% |
| ! | GAAATCATTCTGTTCAAAAA+TGG | - | chr1_1:75348523-75348542 | Msa0043860:three_prime_UTR | 25.0% |
| ! | AAAAAAGGATGAAGAAAAAG+GGG | + | chr1_1:75348701-75348720 | None:intergenic | 25.0% |
| ! | CAAAAAAGGATGAAGAAAAA+GGG | + | chr1_1:75348702-75348721 | None:intergenic | 25.0% |
| !! | TTGATTTTTGTGTGTAGAAA+TGG | - | chr1_1:75348748-75348767 | Msa0043860:three_prime_UTR | 25.0% |
| !! | TGATTTTTGTGTGTAGAAAT+GGG | - | chr1_1:75348749-75348768 | Msa0043860:three_prime_UTR | 25.0% |
| !! | ATAATTTGGTACCTTGTTAT+CGG | + | chr1_1:75348844-75348863 | None:intergenic | 25.0% |
| !!! | TTTCTGATTTGGTGTATTTT+TGG | - | chr1_1:75348982-75349001 | Msa0043860:three_prime_UTR | 25.0% |
| ! | AGAATATTATGAGCTACAAA+AGG | + | chr1_1:75349156-75349175 | None:intergenic | 25.0% |
| !!! | GAATTTTGTTTCTTTTACCA+AGG | - | chr1_1:75349249-75349268 | Msa0043860:intron | 25.0% |
| !!! | GAACATATTTTTGCTTAATG+TGG | - | chr1_1:75349275-75349294 | Msa0043860:intron | 25.0% |
| ! | AATTCGATTTCATTGAAACT+TGG | + | chr1_1:75349513-75349532 | None:intergenic | 25.0% |
| !! | AATTTATGCTGTATCCTTTT+TGG | - | chr1_1:75349655-75349674 | Msa0043860:intron | 25.0% |
| ! | CAGAAAGAAAAAAAAAGGAA+GGG | + | chr1_1:75349721-75349740 | None:intergenic | 25.0% |
| !!! | CTTCCTTTTTTTTTCTTTCT+GGG | - | chr1_1:75349720-75349739 | Msa0043860:intron | 25.0% |
| !!! | TTCCTTTTTTTTTCTTTCTG+GGG | - | chr1_1:75349721-75349740 | Msa0043860:intron | 25.0% |
| ! | TTGTGTATATAGTGTAAAAG+AGG | + | chr1_1:75349770-75349789 | None:intergenic | 25.0% |
| !! | TTTTACACTATATACACAAC+TGG | - | chr1_1:75349771-75349790 | Msa0043860:intron | 25.0% |
| !!! | TTTAGTTGATAGCAAAATTG+TGG | + | chr1_1:75349836-75349855 | None:intergenic | 25.0% |
| ! | CGCTTAAGATAATAATCTAA+AGG | - | chr1_1:75350091-75350110 | Msa0043860:intron | 25.0% |
| !! | ATTAGATTAGTTATCTTTGG+AGG | + | chr1_1:75350127-75350146 | None:intergenic | 25.0% |
| ! | TCCAAAGATAACTAATCTAA+TGG | - | chr1_1:75350126-75350145 | Msa0043860:intron | 25.0% |
| ! | CCAAAGATAACTAATCTAAT+GGG | - | chr1_1:75350127-75350146 | Msa0043860:intron | 25.0% |
| ! | TCCAAAGATAACTAATCTAA+GGG | - | chr1_1:75350126-75350145 | Msa0043860:intron | 25.0% |
| ! | TTAATAAAACGTGAACTTGA+TGG | + | chr1_1:75350200-75350219 | None:intergenic | 25.0% |
| !!! | ACATTTAAGTTTTACTGCTA+TGG | - | chr1_1:75350303-75350322 | Msa0043860:intron | 25.0% |
| !!! | CTCAAAAGAACTGATTTTAT+CGG | - | chr1_1:75350408-75350427 | Msa0043860:intron | 25.0% |
| ! | TTTATTTGTAGTTTCGTCAA+TGG | - | chr1_1:75350539-75350558 | Msa0043860:intron | 25.0% |
| ! | TCACATGCATATAAAATTGT+TGG | - | chr1_1:75350840-75350859 | Msa0043860:CDS | 25.0% |
| AAAAAGGATGAAGAAAAAGG+GGG | + | chr1_1:75348700-75348719 | None:intergenic | 30.0% | |
| CCAAAAAAGGATGAAGAAAA+AGG | + | chr1_1:75348703-75348722 | None:intergenic | 30.0% | |
| ! | CCTTTTTCTTCATCCTTTTT+TGG | - | chr1_1:75348700-75348719 | Msa0043860:three_prime_UTR | 30.0% |
| CAAGAAATTGGATCCAAAAA+AGG | + | chr1_1:75348716-75348735 | None:intergenic | 30.0% | |
| TCAGAAAATCATCTCAGAAT+TGG | + | chr1_1:75348969-75348988 | None:intergenic | 30.0% | |
| !! | TCTGAGATGATTTTCTGATT+TGG | - | chr1_1:75348971-75348990 | Msa0043860:three_prime_UTR | 30.0% |
| GCAAAAATATGTTCAAACCT+TGG | + | chr1_1:75349269-75349288 | None:intergenic | 30.0% | |
| AATTCGATTTCACTGTCATA+TGG | - | chr1_1:75349349-75349368 | Msa0043860:intron | 30.0% | |
| ! | AAGCAACACACTCTTTTTAA+AGG | - | chr1_1:75349400-75349419 | Msa0043860:intron | 30.0% |
| ! | AGCAACACACTCTTTTTAAA+GGG | - | chr1_1:75349401-75349420 | Msa0043860:intron | 30.0% |
| TAGTTAATGACTAAACAGTG+AGG | + | chr1_1:75349432-75349451 | None:intergenic | 30.0% | |
| TAGTTTCACTCGATTTCTAA+AGG | + | chr1_1:75349538-75349557 | None:intergenic | 30.0% | |
| AAATCGAGTGAAACTAGAAA+TGG | - | chr1_1:75349542-75349561 | Msa0043860:intron | 30.0% | |
| ATTGGTTACTCTTTCCAAAA+AGG | + | chr1_1:75349672-75349691 | None:intergenic | 30.0% | |
| CCAGAAAGAAAAAAAAAGGA+AGG | + | chr1_1:75349722-75349741 | None:intergenic | 30.0% | |
| !!! | CCTTCCTTTTTTTTTCTTTC+TGG | - | chr1_1:75349719-75349738 | Msa0043860:intron | 30.0% |
| TGTATATAGTGTAAAAGAGG+TGG | + | chr1_1:75349767-75349786 | None:intergenic | 30.0% | |
| !!! | GTATGCTTTAGCACATTTTT+TGG | - | chr1_1:75349957-75349976 | Msa0043860:intron | 30.0% |
| ! | CCCATTAGATTAGTTATCTT+TGG | + | chr1_1:75350130-75350149 | None:intergenic | 30.0% |
| ! | CTTAGATTAGTTATCTTTGG+AGG | + | chr1_1:75350162-75350181 | None:intergenic | 30.0% |
| CTCCAAAGATAACTAATCTA+AGG | - | chr1_1:75350125-75350144 | Msa0043860:intron | 30.0% | |
| CCAAAGATAACTAATCTAAG+GGG | - | chr1_1:75350162-75350181 | Msa0043860:intron | 30.0% | |
| ! | TTTTACTGCTATGGTGAATT+TGG | - | chr1_1:75350312-75350331 | Msa0043860:intron | 30.0% |
| ATTTGAATGTAGAAACCTGA+TGG | - | chr1_1:75350383-75350402 | Msa0043860:intron | 30.0% | |
| TTTGAATGTAGAAACCTGAT+GGG | - | chr1_1:75350384-75350403 | Msa0043860:intron | 30.0% | |
| ACATAATGTACCAAACATGA+TGG | + | chr1_1:75350591-75350610 | None:intergenic | 30.0% | |
| ! | GATTCAGTCTTGTAATGAAA+GGG | - | chr1_1:75350862-75350881 | Msa0043860:CDS | 30.0% |
| TCTTGCTAAATAAAAGAGCT+AGG | - | chr1_1:75350969-75350988 | Msa0043860:five_prime_UTR | 30.0% | |
| ! | CTGAATGTAGACGTTTTCTT+TGG | + | chr1_1:75348666-75348685 | None:intergenic | 35.0% |
| CAAAGAAAACGTCTACATTC+AGG | - | chr1_1:75348664-75348683 | Msa0043860:three_prime_UTR | 35.0% | |
| ! | CCAATTTCTTGCTTCTGAAA+CGG | - | chr1_1:75348725-75348744 | Msa0043860:three_prime_UTR | 35.0% |
| TTGTTATCGGCATTATCTGT+AGG | + | chr1_1:75348831-75348850 | None:intergenic | 35.0% | |
| TACAGATAATGCCGATAACA+AGG | - | chr1_1:75348830-75348849 | Msa0043860:three_prime_UTR | 35.0% | |
| !! | GCAACACACTCTTTTTAAAG+GGG | - | chr1_1:75349402-75349421 | Msa0043860:intron | 35.0% |
| !! | CAACACACTCTTTTTAAAGG+GGG | - | chr1_1:75349403-75349422 | Msa0043860:intron | 35.0% |
| AGTGAAACTAGAAATGGAGT+TGG | - | chr1_1:75349548-75349567 | Msa0043860:intron | 35.0% | |
| AACTAGAAATGGAGTTGGAA+TGG | - | chr1_1:75349553-75349572 | Msa0043860:intron | 35.0% | |
| AGAGTAACCAATGTTAGACT+TGG | - | chr1_1:75349680-75349699 | Msa0043860:intron | 35.0% | |
| GTTAGTACCAAGTCTAACAT+TGG | + | chr1_1:75349690-75349709 | None:intergenic | 35.0% | |
| CTCCCCAGAAAGAAAAAAAA+AGG | + | chr1_1:75349726-75349745 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTCTTTCTGGGGAG+TGG | - | chr1_1:75349726-75349745 | Msa0043860:intron | 35.0% |
| TTGTGGAGAGATGAATGTAA+GGG | + | chr1_1:75349819-75349838 | None:intergenic | 35.0% | |
| ATTGTGGAGAGATGAATGTA+AGG | + | chr1_1:75349820-75349839 | None:intergenic | 35.0% | |
| ATTTGGTTGCAGTCGTTTAA+GGG | + | chr1_1:75349882-75349901 | None:intergenic | 35.0% | |
| AATTTGGTTGCAGTCGTTTA+AGG | + | chr1_1:75349883-75349902 | None:intergenic | 35.0% | |
| TGTCCATTGCAAATTGTTTG+TGG | - | chr1_1:75350009-75350028 | Msa0043860:intron | 35.0% | |
| ATGCCACAAACAATTTGCAA+TGG | + | chr1_1:75350015-75350034 | None:intergenic | 35.0% | |
| ! | CCCCTTAGATTAGTTATCTT+TGG | + | chr1_1:75350165-75350184 | None:intergenic | 35.0% |
| ! | CTTCCCTGTGATATTTTACT+GGG | - | chr1_1:75350623-75350642 | Msa0043860:intron | 35.0% |
| ATGTAATGTGAGTTTCACTG+TGG | - | chr1_1:75350736-75350755 | Msa0043860:intron | 35.0% | |
| TGGATATTGAGATTCAGTTG+AGG | - | chr1_1:75350756-75350775 | Msa0043860:intron | 35.0% | |
| ATATTGAGATTCAGTTGAGG+AGG | - | chr1_1:75350759-75350778 | Msa0043860:intron | 35.0% | |
| TATTGAGATTCAGTTGAGGA+GGG | - | chr1_1:75350760-75350779 | Msa0043860:intron | 35.0% | |
| ! | GGATTCAGTCTTGTAATGAA+AGG | - | chr1_1:75350861-75350880 | Msa0043860:CDS | 35.0% |
| TCATGTAGAACTGTTCGATT+TGG | - | chr1_1:75350920-75350939 | Msa0043860:CDS | 35.0% | |
| ! | TCAATGGATTCAACATCTCG+TGG | - | chr1_1:75348584-75348603 | Msa0043860:three_prime_UTR | 40.0% |
| CAAAGGTAAGATTCTTAGCG+AGG | - | chr1_1:75348631-75348650 | Msa0043860:three_prime_UTR | 40.0% | |
| CCGTTTCAGAAGCAAGAAAT+TGG | + | chr1_1:75348728-75348747 | None:intergenic | 40.0% | |
| TTTGTGTGTAGAAATGGGAG+AGG | - | chr1_1:75348754-75348773 | Msa0043860:three_prime_UTR | 40.0% | |
| TTGTGTGTAGAAATGGGAGA+GGG | - | chr1_1:75348755-75348774 | Msa0043860:three_prime_UTR | 40.0% | |
| ATTCAATGAAACACGACCAC+AGG | + | chr1_1:75349332-75349351 | None:intergenic | 40.0% | |
| TCGATTTCACTGTCATATGG+TGG | - | chr1_1:75349352-75349371 | Msa0043860:intron | 40.0% | |
| ! | CTACGAACACACTCTTTTGA+AGG | - | chr1_1:75349453-75349472 | Msa0043860:intron | 40.0% |
| !! | CACTCTTTTGAAGGTGGATT+TGG | - | chr1_1:75349462-75349481 | Msa0043860:intron | 40.0% |
| !! | TTGAAGGTGGATTTGGCTTT+CGG | - | chr1_1:75349469-75349488 | Msa0043860:intron | 40.0% |
| GAAATGGAGTTGGAATGGTA+AGG | - | chr1_1:75349558-75349577 | Msa0043860:intron | 40.0% | |
| TTCCATGTTGCTGTGAATCA+AGG | - | chr1_1:75349986-75350005 | Msa0043860:intron | 40.0% | |
| ACTTAAGGGAAGCAATCATG+AGG | - | chr1_1:75350451-75350470 | Msa0043860:intron | 40.0% | |
| ! | TGGTGATGAATCAGACCATT+TGG | - | chr1_1:75350559-75350578 | Msa0043860:intron | 40.0% |
| !! | ACATGATGGATGCAACCAAA+TGG | + | chr1_1:75350577-75350596 | None:intergenic | 40.0% |
| TTGGTTGCATCCATCATGTT+TGG | - | chr1_1:75350578-75350597 | Msa0043860:intron | 40.0% | |
| CCAGTAAAATATCACAGGGA+AGG | + | chr1_1:75350625-75350644 | None:intergenic | 40.0% | |
| ! | CCTTCCCTGTGATATTTTAC+TGG | - | chr1_1:75350622-75350641 | Msa0043860:intron | 40.0% |
| CAGCCCAGTAAAATATCACA+GGG | + | chr1_1:75350629-75350648 | None:intergenic | 40.0% | |
| TCGAAGCTACTCTCAATTCT+AGG | - | chr1_1:75350799-75350818 | Msa0043860:intron | 40.0% | |
| TGCATGTGATGTGAGCATTA+GGG | + | chr1_1:75350829-75350848 | None:intergenic | 40.0% | |
| ATGCATGTGATGTGAGCATT+AGG | + | chr1_1:75350830-75350849 | None:intergenic | 40.0% | |
| CAGTTCTACATGAATCAGCT+AGG | + | chr1_1:75350913-75350932 | None:intergenic | 40.0% | |
| TGTAGAAATGGGAGAGGGAA+AGG | - | chr1_1:75348760-75348779 | Msa0043860:three_prime_UTR | 45.0% | |
| ACAGAAGCTAGCTGCTGATA+AGG | - | chr1_1:75348791-75348810 | Msa0043860:three_prime_UTR | 45.0% | |
| GCTTAATGTGGTATTGCACG+TGG | - | chr1_1:75349287-75349306 | Msa0043860:intron | 45.0% | |
| ! | ACGTGGTGATGACATGATTC+TGG | - | chr1_1:75349304-75349323 | Msa0043860:intron | 45.0% |
| !! | TGACATGATTCTGGAACCTG+TGG | - | chr1_1:75349313-75349332 | Msa0043860:intron | 45.0% |
| !! | CGAACACACTCTTTTGAAGG+TGG | - | chr1_1:75349456-75349475 | Msa0043860:intron | 45.0% |
| CACCTTGATTCACAGCAACA+TGG | + | chr1_1:75349991-75350010 | None:intergenic | 45.0% | |
| !! | CAGTTCTTTTGAGTCCCATC+AGG | + | chr1_1:75350401-75350420 | None:intergenic | 45.0% |
| TAGCCGTCAAGGTCACTTAA+GGG | - | chr1_1:75350437-75350456 | Msa0043860:intron | 45.0% | |
| CTTCCCTTAAGTGACCTTGA+CGG | + | chr1_1:75350443-75350462 | None:intergenic | 45.0% | |
| CCAGCCCAGTAAAATATCAC+AGG | + | chr1_1:75350630-75350649 | None:intergenic | 45.0% | |
| ! | CCTGTGATATTTTACTGGGC+TGG | - | chr1_1:75350627-75350646 | Msa0043860:intron | 45.0% |
| !!! | ATATTTTACTGGGCTGGCAG+TGG | - | chr1_1:75350633-75350652 | Msa0043860:intron | 45.0% |
| ATTCAGTTGAGGAGGGAGTT+TGG | - | chr1_1:75350767-75350786 | Msa0043860:intron | 45.0% | |
| GCATGTGATGTGAGCATTAG+GGG | + | chr1_1:75350828-75350847 | None:intergenic | 45.0% | |
| GGAGTCTTAGCTCCAATCTA+AGG | - | chr1_1:75350883-75350902 | Msa0043860:CDS | 45.0% | |
| ! | ATGAGATCAGCACTGAGTCG+AGG | - | chr1_1:75348548-75348567 | Msa0043860:three_prime_UTR | 50.0% |
| ! | TGAGATCAGCACTGAGTCGA+GGG | - | chr1_1:75348549-75348568 | Msa0043860:three_prime_UTR | 50.0% |
| AGGGATCGTGACTCGTTCAA+TGG | - | chr1_1:75348568-75348587 | Msa0043860:three_prime_UTR | 50.0% | |
| GCTTCTTCTCGCTTCTTCAG+CGG | - | chr1_1:75348608-75348627 | Msa0043860:three_prime_UTR | 50.0% | |
| GAAATGGGAGAGGGAAAGGT+TGG | - | chr1_1:75348764-75348783 | Msa0043860:three_prime_UTR | 50.0% | |
| GCTAGCTGCTGATAAGGCTA+AGG | - | chr1_1:75348797-75348816 | Msa0043860:three_prime_UTR | 50.0% | |
| AGCTGCTGATAAGGCTAAGG+CGG | - | chr1_1:75348800-75348819 | Msa0043860:three_prime_UTR | 50.0% | |
| TGGAGTTGGAATGGTAAGGC+AGG | - | chr1_1:75349562-75349581 | Msa0043860:intron | 50.0% | |
| ACAACTGCGCACCATGGTAA+GGG | + | chr1_1:75350070-75350089 | None:intergenic | 50.0% | |
| CTAGCCGTCAAGGTCACTTA+AGG | - | chr1_1:75350436-75350455 | Msa0043860:intron | 50.0% | |
| CAGCTAGGCTGACCTTAGAT+TGG | + | chr1_1:75350898-75350917 | None:intergenic | 50.0% | |
| TCTCGCTTCTTCAGCGGCAA+AGG | - | chr1_1:75348614-75348633 | Msa0043860:three_prime_UTR | 55.0% | |
| AATCATCCCCCTGCTGTGCT+TGG | + | chr1_1:75350045-75350064 | None:intergenic | 55.0% | |
| GGGATGATTGCCCCTTACCA+TGG | - | chr1_1:75350056-75350075 | Msa0043860:intron | 55.0% | |
| CAACTGCGCACCATGGTAAG+GGG | + | chr1_1:75350069-75350088 | None:intergenic | 55.0% | |
| CACAACTGCGCACCATGGTA+AGG | + | chr1_1:75350071-75350090 | None:intergenic | 55.0% | |
| ATCGGTCTTGCTAGCCGTCA+AGG | - | chr1_1:75350426-75350445 | Msa0043860:intron | 55.0% | |
| ATGCGCCTTCCAAGCACAGC+AGG | - | chr1_1:75350033-75350052 | Msa0043860:intron | 60.0% | |
| TGCGCCTTCCAAGCACAGCA+GGG | - | chr1_1:75350034-75350053 | Msa0043860:intron | 60.0% | |
| ATCCCCCTGCTGTGCTTGGA+AGG | + | chr1_1:75350041-75350060 | None:intergenic | 60.0% | |
| AAGCGCACAACTGCGCACCA+TGG | + | chr1_1:75350076-75350095 | None:intergenic | 60.0% | |
| GCGCCTTCCAAGCACAGCAG+GGG | - | chr1_1:75350035-75350054 | Msa0043860:intron | 65.0% | |
| CGCCTTCCAAGCACAGCAGG+GGG | - | chr1_1:75350036-75350055 | Msa0043860:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 75348496 | 75350998 | 75348496 | ID=Msa0043860;Name=Msa0043860 |
| chr1_1 | mRNA | 75348496 | 75350998 | 75348496 | ID=Msa0043860-mRNA-1;Parent=Msa0043860;Name=Msa0043860-mRNA-1;_AED=0.01;_eAED=0.01;_QI=46|1|1|1|0.5|0.66|3|577|85 |
| chr1_1 | exon | 75348496 | 75349099 | 75348496 | ID=Msa0043860-mRNA-1:exon:25404;Parent=Msa0043860-mRNA-1 |
| chr1_1 | exon | 75350643 | 75350729 | 75350643 | ID=Msa0043860-mRNA-1:exon:25403;Parent=Msa0043860-mRNA-1 |
| chr1_1 | exon | 75350809 | 75350998 | 75350809 | ID=Msa0043860-mRNA-1:exon:25402;Parent=Msa0043860-mRNA-1 |
| chr1_1 | five_prime_UTR | 75350953 | 75350998 | 75350953 | ID=Msa0043860-mRNA-1:five_prime_utr;Parent=Msa0043860-mRNA-1 |
| chr1_1 | CDS | 75350809 | 75350952 | 75350809 | ID=Msa0043860-mRNA-1:cds;Parent=Msa0043860-mRNA-1 |
| chr1_1 | CDS | 75350643 | 75350729 | 75350643 | ID=Msa0043860-mRNA-1:cds;Parent=Msa0043860-mRNA-1 |
| chr1_1 | CDS | 75349073 | 75349099 | 75349073 | ID=Msa0043860-mRNA-1:cds;Parent=Msa0043860-mRNA-1 |
| chr1_1 | three_prime_UTR | 75348496 | 75349072 | 75348496 | ID=Msa0043860-mRNA-1:three_prime_utr;Parent=Msa0043860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
