Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0665080 | XP_003604367.1 | 98.185 | 496 | 9 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1009 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0665080 | sp|P49972|SR542_SOLLC | 91.134 | 485 | 43 | 0 | 1 | 485 | 1 | 485 | 0.0 | 926 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0665080 | G7JGX1 | 98.185 | 496 | 9 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1009 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003630 | Msa0665080 | 0.818628 | 1.775191e-52 | -8.615850e-47 |
Msa0006880 | Msa0665080 | 0.813496 | 2.485397e-51 | -8.615850e-47 |
Msa0007850 | Msa0665080 | 0.802687 | 4.984133e-49 | -8.615850e-47 |
Msa0008200 | Msa0665080 | 0.838126 | 3.460968e-57 | -8.615850e-47 |
Msa0010490 | Msa0665080 | 0.824268 | 8.848625e-54 | -8.615850e-47 |
Msa0010500 | Msa0665080 | 0.821460 | 3.991358e-53 | -8.615850e-47 |
Msa0015090 | Msa0665080 | 0.841252 | 5.319467e-58 | -8.615850e-47 |
Msa0017320 | Msa0665080 | 0.812822 | 3.493465e-51 | -8.615850e-47 |
Msa0029260 | Msa0665080 | 0.838662 | 2.516735e-57 | -8.615850e-47 |
Msa0030300 | Msa0665080 | 0.825043 | 5.813728e-54 | -8.615850e-47 |
Msa0033880 | Msa0665080 | 0.813404 | 2.604130e-51 | -8.615850e-47 |
Msa0037840 | Msa0665080 | 0.801811 | 7.549979e-49 | -8.615850e-47 |
Msa0038870 | Msa0665080 | 0.826190 | 3.108025e-54 | -8.615850e-47 |
Msa0043730 | Msa0665080 | 0.807971 | 3.895288e-50 | -8.615850e-47 |
Msa0049750 | Msa0665080 | 0.840148 | 1.034960e-57 | -8.615850e-47 |
Msa0055100 | Msa0665080 | 0.822313 | 2.532143e-53 | -8.615850e-47 |
Msa0058310 | Msa0665080 | 0.809100 | 2.235499e-50 | -8.615850e-47 |
Msa0059890 | Msa0665080 | 0.803192 | 3.920302e-49 | -8.615850e-47 |
Msa0059950 | Msa0665080 | 0.811508 | 6.759432e-51 | -8.615850e-47 |
Msa0065650 | Msa0665080 | 0.823897 | 1.081657e-53 | -8.615850e-47 |
Msa0068020 | Msa0665080 | 0.816871 | 4.422129e-52 | -8.615850e-47 |
Msa0072170 | Msa0665080 | 0.828107 | 1.080492e-54 | -8.615850e-47 |
Msa0074750 | Msa0665080 | 0.812818 | 3.500579e-51 | -8.615850e-47 |
Msa0076780 | Msa0665080 | 0.818388 | 2.012124e-52 | -8.615850e-47 |
Msa0077900 | Msa0665080 | 0.811122 | 8.199246e-51 | -8.615850e-47 |
Msa0081650 | Msa0665080 | 0.833915 | 4.052333e-56 | -8.615850e-47 |
Msa0086420 | Msa0665080 | 0.815249 | 1.018382e-51 | -8.615850e-47 |
Msa0090550 | Msa0665080 | 0.805767 | 1.138926e-49 | -8.615850e-47 |
Msa0093420 | Msa0665080 | 0.800914 | 1.152540e-48 | -8.615850e-47 |
Msa0093960 | Msa0665080 | 0.804469 | 2.127942e-49 | -8.615850e-47 |
Msa0095360 | Msa0665080 | 0.801190 | 1.012211e-48 | -8.615850e-47 |
Msa0095770 | Msa0665080 | 0.804035 | 2.620789e-49 | -8.615850e-47 |
Msa0096700 | Msa0665080 | 0.801869 | 7.347152e-49 | -8.615850e-47 |
Msa0101180 | Msa0665080 | 0.808847 | 2.532457e-50 | -8.615850e-47 |
Msa0103790 | Msa0665080 | 0.810986 | 8.775031e-51 | -8.615850e-47 |
Msa0108870 | Msa0665080 | 0.806942 | 6.439049e-50 | -8.615850e-47 |
Msa0111080 | Msa0665080 | 0.830862 | 2.312091e-55 | -8.615850e-47 |
Msa0113130 | Msa0665080 | 0.801347 | 9.398280e-49 | -8.615850e-47 |
Msa0113240 | Msa0665080 | 0.827737 | 1.326479e-54 | -8.615850e-47 |
Msa0115370 | Msa0665080 | 0.802887 | 4.531523e-49 | -8.615850e-47 |
Msa0115460 | Msa0665080 | 0.801006 | 1.103819e-48 | -8.615850e-47 |
Msa0118540 | Msa0665080 | 0.851802 | 6.998654e-61 | -8.615850e-47 |
Msa0120540 | Msa0665080 | 0.821638 | 3.629638e-53 | -8.615850e-47 |
Msa0603670 | Msa0665080 | 0.812874 | 3.402835e-51 | -8.615850e-47 |
Msa0607510 | Msa0665080 | 0.801069 | 1.071516e-48 | -8.615850e-47 |
Msa0609000 | Msa0665080 | 0.813108 | 3.024465e-51 | -8.615850e-47 |
Msa0609220 | Msa0665080 | 0.832524 | 9.001643e-56 | -8.615850e-47 |
Msa0610130 | Msa0665080 | 0.845824 | 3.190432e-59 | -8.615850e-47 |
Msa0610180 | Msa0665080 | 0.833393 | 5.472490e-56 | -8.615850e-47 |
Msa0615360 | Msa0665080 | 0.818828 | 1.599217e-52 | -8.615850e-47 |
Msa0618930 | Msa0665080 | 0.823036 | 1.719399e-53 | -8.615850e-47 |
Msa0618950 | Msa0665080 | 0.807746 | 4.347194e-50 | -8.615850e-47 |
Msa0619210 | Msa0665080 | 0.802269 | 6.079190e-49 | -8.615850e-47 |
Msa0619920 | Msa0665080 | 0.845986 | 2.883570e-59 | -8.615850e-47 |
Msa0620330 | Msa0665080 | 0.819063 | 1.414059e-52 | -8.615850e-47 |
Msa0626850 | Msa0665080 | 0.808034 | 3.776921e-50 | -8.615850e-47 |
Msa0626940 | Msa0665080 | 0.981478 | 1.092482e-152 | -8.615850e-47 |
Msa0628290 | Msa0665080 | 0.809298 | 2.027333e-50 | -8.615850e-47 |
Msa0628400 | Msa0665080 | 0.801169 | 1.022350e-48 | -8.615850e-47 |
Msa0628420 | Msa0665080 | 0.812792 | 3.547574e-51 | -8.615850e-47 |
Msa0631350 | Msa0665080 | 0.837420 | 5.252482e-57 | -8.615850e-47 |
Msa0643320 | Msa0665080 | 0.862961 | 3.496667e-64 | -8.615850e-47 |
Msa0654620 | Msa0665080 | 0.823321 | 1.475216e-53 | -8.615850e-47 |
Msa0657120 | Msa0665080 | 0.823292 | 1.498105e-53 | -8.615850e-47 |
Msa0659790 | Msa0665080 | 0.825451 | 4.654674e-54 | -8.615850e-47 |
Msa0659990 | Msa0665080 | 0.813094 | 3.045704e-51 | -8.615850e-47 |
Msa0664970 | Msa0665080 | 0.835584 | 1.541059e-56 | -8.615850e-47 |
Msa0665080 | Msa0669720 | 0.829836 | 4.119980e-55 | -8.615850e-47 |
Msa0665080 | Msa0669760 | 0.830463 | 2.895670e-55 | -8.615850e-47 |
Msa0665080 | Msa0673470 | 0.810033 | 1.409214e-50 | -8.615850e-47 |
Msa0665080 | Msa0679360 | 0.803542 | 3.316601e-49 | -8.615850e-47 |
Msa0665080 | Msa0679550 | 0.814966 | 1.177087e-51 | -8.615850e-47 |
Msa0665080 | Msa0683140 | 0.854079 | 1.562430e-61 | -8.615850e-47 |
Msa0665080 | Msa0683600 | 0.851958 | 6.319772e-61 | -8.615850e-47 |
Msa0665080 | Msa0686080 | 0.822437 | 2.370421e-53 | -8.615850e-47 |
Msa0665080 | Msa0689440 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
Msa0665080 | Msa0693790 | 0.823395 | 1.417400e-53 | -8.615850e-47 |
Msa0665080 | Msa0694840 | 0.809933 | 1.481154e-50 | -8.615850e-47 |
Msa0665080 | Msa0701100 | 0.820774 | 5.743629e-53 | -8.615850e-47 |
Msa0665080 | Msa0703910 | 0.866778 | 2.222409e-65 | -8.615850e-47 |
Msa0665080 | Msa0705390 | 0.817506 | 3.183391e-52 | -8.615850e-47 |
Msa0665080 | Msa0705820 | 0.809020 | 2.326054e-50 | -8.615850e-47 |
Msa0665080 | Msa0705990 | 0.809698 | 1.664111e-50 | -8.615850e-47 |
Msa0665080 | Msa0706390 | 0.819731 | 9.954510e-53 | -8.615850e-47 |
Msa0665080 | Msa0726080 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
Msa0665080 | Msa0742150 | 0.802541 | 5.342073e-49 | -8.615850e-47 |
Msa0665080 | Msa0746170 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
Msa0665080 | Msa0750850 | 0.832682 | 8.221658e-56 | -8.615850e-47 |
Msa0665080 | Msa0757720 | 0.819443 | 1.158356e-52 | -8.615850e-47 |
Msa0665080 | Msa0763920 | 0.810617 | 1.054611e-50 | -8.615850e-47 |
Msa0665080 | Msa0775560 | 0.800791 | 1.221319e-48 | -8.615850e-47 |
Msa0665080 | Msa0780880 | 0.802690 | 4.977783e-49 | -8.615850e-47 |
Msa0665080 | Msa0792780 | 0.803366 | 3.608105e-49 | -8.615850e-47 |
Msa0665080 | Msa0822170 | 0.811127 | 8.178654e-51 | -8.615850e-47 |
Msa0665080 | Msa0829220 | 0.816951 | 4.244427e-52 | -8.615850e-47 |
Msa0665080 | Msa0846230 | 0.803958 | 2.718973e-49 | -8.615850e-47 |
Msa0665080 | Msa0853950 | 0.807631 | 4.600686e-50 | -8.615850e-47 |
Msa0665080 | Msa0858440 | 0.809545 | 1.794751e-50 | -8.615850e-47 |
Msa0665080 | Msa0861470 | 0.853324 | 2.577110e-61 | -8.615850e-47 |
Msa0665080 | Msa0861570 | 0.861018 | 1.377684e-63 | -8.615850e-47 |
Msa0665080 | Msa0877710 | 0.804386 | 2.214548e-49 | -8.615850e-47 |
Msa0665080 | Msa0879860 | 0.803624 | 3.189433e-49 | -8.615850e-47 |
Msa0665080 | Msa0880810 | 0.822158 | 2.750954e-53 | -8.615850e-47 |
Msa0665080 | Msa0887250 | 0.808064 | 3.721595e-50 | -8.615850e-47 |
Msa0665080 | Msa0901320 | 0.818818 | 1.606967e-52 | -8.615850e-47 |
Msa0665080 | Msa0901450 | 0.821061 | 4.931870e-53 | -8.615850e-47 |
Msa0665080 | Msa0905380 | 0.809993 | 1.437672e-50 | -8.615850e-47 |
Msa0665080 | Msa0921870 | 0.820731 | 5.875700e-53 | -8.615850e-47 |
Msa0665080 | Msa0925770 | 0.801208 | 1.003719e-48 | -8.615850e-47 |
Msa0665080 | Msa0933290 | 0.800761 | 1.238506e-48 | -8.615850e-47 |
Msa0665080 | Msa0937330 | 0.812663 | 3.785562e-51 | -8.615850e-47 |
Msa0665080 | Msa0943270 | 0.854124 | 1.516620e-61 | -8.615850e-47 |
Msa0665080 | Msa0944200 | 0.802165 | 6.386757e-49 | -8.615850e-47 |
Msa0665080 | Msa0980020 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
Msa0665080 | Msa0992580 | 0.812541 | 4.025014e-51 | -8.615850e-47 |
Msa0665080 | Msa0992600 | 0.816425 | 5.566206e-52 | -8.615850e-47 |
Msa0665080 | Msa0993240 | 0.838748 | 2.392152e-57 | -8.615850e-47 |
Msa0665080 | Msa0994370 | 0.806928 | 6.481990e-50 | -8.615850e-47 |
Msa0665080 | Msa1001350 | 0.815709 | 8.044969e-52 | -8.615850e-47 |
Msa0665080 | Msa1025940 | 0.802491 | 5.471420e-49 | -8.615850e-47 |
Msa0665080 | Msa1029970 | 0.816534 | 5.263905e-52 | -8.615850e-47 |
Msa0665080 | Msa1036740 | 0.800682 | 1.285172e-48 | -8.615850e-47 |
Msa0665080 | Msa1042660 | 0.809925 | 1.486712e-50 | -8.615850e-47 |
Msa0665080 | Msa1063420 | 0.808095 | 3.665774e-50 | -8.615850e-47 |
Msa0665080 | Msa1070390 | 0.807862 | 4.107511e-50 | -8.615850e-47 |
Msa0665080 | Msa1071320 | 0.860241 | 2.369996e-63 | -8.615850e-47 |
Msa0665080 | Msa1077070 | 0.810803 | 9.611335e-51 | -8.615850e-47 |
Msa0665080 | Msa1081790 | -0.801915 | 7.186990e-49 | -8.615850e-47 |
Msa0665080 | Msa1088290 | 0.815740 | 7.917570e-52 | -8.615850e-47 |
Msa0665080 | Msa1089320 | 0.814680 | 1.362075e-51 | -8.615850e-47 |
Msa0665080 | Msa1094430 | 0.814893 | 1.221339e-51 | -8.615850e-47 |
Msa0665080 | Msa1113880 | 0.803236 | 3.837963e-49 | -8.615850e-47 |
Msa0665080 | Msa1120810 | 0.805352 | 1.391324e-49 | -8.615850e-47 |
Msa0665080 | Msa1122780 | 0.810488 | 1.124208e-50 | -8.615850e-47 |
Msa0665080 | Msa1126850 | 0.809406 | 1.922651e-50 | -8.615850e-47 |
Msa0665080 | Msa1133230 | 0.818041 | 2.410404e-52 | -8.615850e-47 |
Msa0665080 | Msa1133250 | 0.821651 | 3.605387e-53 | -8.615850e-47 |
Msa0665080 | Msa1144040 | 0.810518 | 1.107435e-50 | -8.615850e-47 |
Msa0665080 | Msa1144970 | 0.829138 | 6.086182e-55 | -8.615850e-47 |
Msa0665080 | Msa1152520 | 0.806799 | 6.902502e-50 | -8.615850e-47 |
Msa0665080 | Msa1158230 | 0.814107 | 1.823438e-51 | -8.615850e-47 |
Msa0665080 | Msa1163870 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
Msa0665080 | Msa1165960 | 0.800491 | 1.405957e-48 | -8.615850e-47 |
Msa0665080 | Msa1176360 | 0.825231 | 5.246841e-54 | -8.615850e-47 |
Msa0665080 | Msa1197070 | 0.824149 | 9.438132e-54 | -8.615850e-47 |
Msa0665080 | Msa1200320 | 0.807233 | 5.587759e-50 | -8.615850e-47 |
Msa0665080 | Msa1203880 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
Msa0665080 | Msa1205480 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
Msa0665080 | Msa1205590 | 0.843392 | 1.441765e-58 | -8.615850e-47 |
Msa0665080 | Msa1206310 | 0.807050 | 6.108830e-50 | -8.615850e-47 |
Msa0665080 | Msa1206360 | 0.807837 | 4.158429e-50 | -8.615850e-47 |
Msa0665080 | Msa1206650 | 0.814206 | 1.733508e-51 | -8.615850e-47 |
Msa0665080 | Msa1207310 | 0.824783 | 6.693894e-54 | -8.615850e-47 |
Msa0665080 | Msa1207350 | 0.801183 | 1.015212e-48 | -8.615850e-47 |
Msa0665080 | Msa1207730 | 0.803774 | 2.968616e-49 | -8.615850e-47 |
Msa0665080 | Msa1208380 | 0.834017 | 3.820945e-56 | -8.615850e-47 |
Msa0665080 | Msa1209860 | 0.801350 | 9.387124e-49 | -8.615850e-47 |
Msa0665080 | Msa1211830 | 0.806793 | 6.922132e-50 | -8.615850e-47 |
Msa0665080 | Msa1218580 | 0.822415 | 2.398011e-53 | -8.615850e-47 |
Msa0665080 | Msa1250110 | 0.823094 | 1.666244e-53 | -8.615850e-47 |
Msa0665080 | Msa1250730 | 0.817821 | 2.702262e-52 | -8.615850e-47 |
Msa0665080 | Msa1253810 | 0.826946 | 2.052217e-54 | -8.615850e-47 |
Msa0665080 | Msa1258370 | 0.828575 | 8.329201e-55 | -8.615850e-47 |
Msa0665080 | Msa1259530 | 0.823616 | 1.258761e-53 | -8.615850e-47 |
Msa0665080 | Msa1270660 | 0.833326 | 5.688666e-56 | -8.615850e-47 |
Msa0665080 | Msa1270730 | 0.820372 | 7.101952e-53 | -8.615850e-47 |
Msa0665080 | Msa1279590 | 0.816109 | 6.550731e-52 | -8.615850e-47 |
Msa0665080 | Msa1280620 | 0.824681 | 7.075820e-54 | -8.615850e-47 |
Msa0665080 | Msa1289300 | 0.810929 | 9.028986e-51 | -8.615850e-47 |
Msa0665080 | Msa1295330 | 0.806959 | 6.383992e-50 | -8.615850e-47 |
Msa0665080 | Msa1295930 | 0.821328 | 4.279682e-53 | -8.615850e-47 |
Msa0665080 | Msa1297530 | 0.824642 | 7.226423e-54 | -8.615850e-47 |
Msa0665080 | Msa1297600 | 0.807061 | 6.076327e-50 | -8.615850e-47 |
Msa0665080 | Msa1299700 | 0.816225 | 6.170974e-52 | -8.615850e-47 |
Msa0665080 | Msa1307180 | 0.841350 | 5.012140e-58 | -8.615850e-47 |
Msa0665080 | Msa1316360 | 0.848844 | 4.731039e-60 | -8.615850e-47 |
Msa0665080 | Msa1331350 | 0.815307 | 9.886296e-52 | -8.615850e-47 |
Msa0665080 | Msa1332220 | 0.808473 | 3.044644e-50 | -8.615850e-47 |
Msa0665080 | Msa1339190 | 0.803650 | 3.150317e-49 | -8.615850e-47 |
Msa0665080 | Msa1340830 | 0.810973 | 8.830323e-51 | -8.615850e-47 |
Msa0665080 | Msa1351540 | 0.809538 | 1.801243e-50 | -8.615850e-47 |
Msa0665080 | Msa1352890 | 0.803410 | 3.532688e-49 | -8.615850e-47 |
Msa0665080 | Msa1355890 | 0.821050 | 4.961607e-53 | -8.615850e-47 |
Msa0665080 | Msa1357430 | 0.819132 | 1.363662e-52 | -8.615850e-47 |
Msa0665080 | Msa1363700 | 0.817598 | 3.035072e-52 | -8.615850e-47 |
Msa0665080 | Msa1364210 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
Msa0665080 | Msa1370590 | 0.832116 | 1.135926e-55 | -8.615850e-47 |
Msa0665080 | Msa1371090 | 0.807137 | 5.854781e-50 | -8.615850e-47 |
Msa0665080 | Msa1371240 | 0.816497 | 5.363985e-52 | -8.615850e-47 |
Msa0665080 | Msa1372290 | 0.825286 | 5.093338e-54 | -8.615850e-47 |
Msa0665080 | Msa1381650 | 0.805927 | 1.054100e-49 | -8.615850e-47 |
Msa0665080 | Msa1382020 | 0.822453 | 2.350266e-53 | -8.615850e-47 |
Msa0665080 | Msa1383350 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
Msa0665080 | Msa1384100 | 0.824318 | 8.611827e-54 | -8.615850e-47 |
Msa0665080 | Msa1388860 | 0.802932 | 4.437481e-49 | -8.615850e-47 |
Msa0665080 | Msa1411950 | 0.808046 | 3.753678e-50 | -8.615850e-47 |
Msa0665080 | Msa1418920 | 0.801033 | 1.089956e-48 | -8.615850e-47 |
Msa0665080 | Msa1422810 | 0.808702 | 2.720058e-50 | -8.615850e-47 |
Msa0665080 | Msa1426920 | 0.805648 | 1.206021e-49 | -8.615850e-47 |
Msa0665080 | Msa1428780 | 0.815106 | 1.095839e-51 | -8.615850e-47 |
Msa0665080 | Msa1433600 | 0.826412 | 2.752398e-54 | -8.615850e-47 |
Msa0665080 | Msa1436520 | 0.807370 | 5.225671e-50 | -8.615850e-47 |
Msa0665080 | Msa1436600 | 0.823179 | 1.591770e-53 | -8.615850e-47 |
Msa0665080 | Msa1438840 | 0.866136 | 3.554354e-65 | -8.615850e-47 |
Msa0665080 | Msa1442790 | 0.814638 | 1.391248e-51 | -8.615850e-47 |
Msa0665080 | Msa1444120 | 0.823850 | 1.109368e-53 | -8.615850e-47 |
Msa0665080 | Msa1447890 | 0.820521 | 6.564399e-53 | -8.615850e-47 |
Msa0665080 | Msa1462470 | 0.823312 | 1.481937e-53 | -8.615850e-47 |
Msa0665080 | Msa1463600 | 0.805655 | 1.202151e-49 | -8.615850e-47 |
Msa0121820 | Msa0665080 | 0.809415 | 1.913608e-50 | -8.615850e-47 |
Msa0126770 | Msa0665080 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
Msa0126880 | Msa0665080 | 0.835282 | 1.837479e-56 | -8.615850e-47 |
Msa0127040 | Msa0665080 | 0.821283 | 4.383998e-53 | -8.615850e-47 |
Msa0127850 | Msa0665080 | 0.811409 | 7.103477e-51 | -8.615850e-47 |
Msa0130520 | Msa0665080 | 0.815346 | 9.690653e-52 | -8.615850e-47 |
Msa0138020 | Msa0665080 | 0.831136 | 1.980780e-55 | -8.615850e-47 |
Msa0138640 | Msa0665080 | 0.811937 | 5.451456e-51 | -8.615850e-47 |
Msa0142280 | Msa0665080 | 0.807560 | 4.763039e-50 | -8.615850e-47 |
Msa0142500 | Msa0665080 | 0.822078 | 2.871932e-53 | -8.615850e-47 |
Msa0145150 | Msa0665080 | 0.847403 | 1.182340e-59 | -8.615850e-47 |
Msa0145740 | Msa0665080 | 0.800449 | 1.433629e-48 | -8.615850e-47 |
Msa0150260 | Msa0665080 | 0.804797 | 1.818140e-49 | -8.615850e-47 |
Msa0154920 | Msa0665080 | 0.835960 | 1.238044e-56 | -8.615850e-47 |
Msa0164370 | Msa0665080 | 0.812346 | 4.440246e-51 | -8.615850e-47 |
Msa0166750 | Msa0665080 | 0.817747 | 2.809636e-52 | -8.615850e-47 |
Msa0167980 | Msa0665080 | 0.805717 | 1.166303e-49 | -8.615850e-47 |
Msa0169300 | Msa0665080 | 0.833014 | 6.802443e-56 | -8.615850e-47 |
Msa0171980 | Msa0665080 | 0.824957 | 6.090820e-54 | -8.615850e-47 |
Msa0174000 | Msa0665080 | 0.817851 | 2.661062e-52 | -8.615850e-47 |
Msa0176030 | Msa0665080 | 0.803583 | 3.253381e-49 | -8.615850e-47 |
Msa0176330 | Msa0665080 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
Msa0177270 | Msa0665080 | 0.824514 | 7.747717e-54 | -8.615850e-47 |
Msa0183870 | Msa0665080 | 0.821255 | 4.448979e-53 | -8.615850e-47 |
Msa0186770 | Msa0665080 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
Msa0187490 | Msa0665080 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
Msa0189030 | Msa0665080 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
Msa0202410 | Msa0665080 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
Msa0202930 | Msa0665080 | 0.803301 | 3.722222e-49 | -8.615850e-47 |
Msa0229360 | Msa0665080 | 0.836805 | 7.546691e-57 | -8.615850e-47 |
Msa0233370 | Msa0665080 | 0.829417 | 5.209470e-55 | -8.615850e-47 |
Msa0378010 | Msa0665080 | 0.816947 | 4.252726e-52 | -8.615850e-47 |
Msa0380100 | Msa0665080 | 0.809386 | 1.941193e-50 | -8.615850e-47 |
Msa0381700 | Msa0665080 | 0.800584 | 1.345846e-48 | -8.615850e-47 |
Msa0384880 | Msa0665080 | 0.817132 | 3.864316e-52 | -8.615850e-47 |
Msa0385490 | Msa0665080 | 0.835006 | 2.156777e-56 | -8.615850e-47 |
Msa0387050 | Msa0665080 | 0.813004 | 3.186889e-51 | -8.615850e-47 |
Msa0387910 | Msa0665080 | 0.806973 | 6.341060e-50 | -8.615850e-47 |
Msa0392270 | Msa0665080 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
Msa0408390 | Msa0665080 | 0.801185 | 1.014616e-48 | -8.615850e-47 |
Msa0419520 | Msa0665080 | 0.820161 | 7.939380e-53 | -8.615850e-47 |
Msa0427580 | Msa0665080 | 0.800404 | 1.464523e-48 | -8.615850e-47 |
Msa0432500 | Msa0665080 | 0.827914 | 1.202279e-54 | -8.615850e-47 |
Msa0435220 | Msa0665080 | 0.824539 | 7.642655e-54 | -8.615850e-47 |
Msa0436190 | Msa0665080 | 0.810185 | 1.307192e-50 | -8.615850e-47 |
Msa0439890 | Msa0665080 | 0.821123 | 4.772469e-53 | -8.615850e-47 |
Msa0455590 | Msa0665080 | 0.806493 | 8.008030e-50 | -8.615850e-47 |
Msa0458640 | Msa0665080 | 0.808390 | 3.170964e-50 | -8.615850e-47 |
Msa0465550 | Msa0665080 | 0.811086 | 8.344836e-51 | -8.615850e-47 |
Msa0467220 | Msa0665080 | 0.814223 | 1.719135e-51 | -8.615850e-47 |
Msa0479330 | Msa0665080 | 0.844272 | 8.378290e-59 | -8.615850e-47 |
Msa0481030 | Msa0665080 | 0.820539 | 6.503502e-53 | -8.615850e-47 |
Msa0481280 | Msa0665080 | 0.813553 | 2.415393e-51 | -8.615850e-47 |
Msa0481810 | Msa0665080 | 0.804507 | 2.089690e-49 | -8.615850e-47 |
Msa0482180 | Msa0665080 | 0.839381 | 1.639025e-57 | -8.615850e-47 |
Msa0244970 | Msa0665080 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
Msa0244980 | Msa0665080 | 0.846753 | 1.781638e-59 | -8.615850e-47 |
Msa0262370 | Msa0665080 | 0.806265 | 8.945009e-50 | -8.615850e-47 |
Msa0266210 | Msa0665080 | 0.800646 | 1.306959e-48 | -8.615850e-47 |
Msa0271790 | Msa0665080 | 0.809257 | 2.069625e-50 | -8.615850e-47 |
Msa0271890 | Msa0665080 | 0.807340 | 5.303352e-50 | -8.615850e-47 |
Msa0283420 | Msa0665080 | 0.831172 | 1.940272e-55 | -8.615850e-47 |
Msa0284820 | Msa0665080 | 0.810942 | 8.970064e-51 | -8.615850e-47 |
Msa0296920 | Msa0665080 | 0.813847 | 2.080201e-51 | -8.615850e-47 |
Msa0296980 | Msa0665080 | -0.807272 | 5.482329e-50 | -8.615850e-47 |
Msa0299520 | Msa0665080 | 0.836511 | 8.964903e-57 | -8.615850e-47 |
Msa0309270 | Msa0665080 | 0.809560 | 1.781162e-50 | -8.615850e-47 |
Msa0310430 | Msa0665080 | 0.816705 | 4.818640e-52 | -8.615850e-47 |
Msa0310860 | Msa0665080 | 0.806949 | 6.415396e-50 | -8.615850e-47 |
Msa0311720 | Msa0665080 | 0.812189 | 4.806006e-51 | -8.615850e-47 |
Msa0321690 | Msa0665080 | 0.835703 | 1.438310e-56 | -8.615850e-47 |
Msa0322680 | Msa0665080 | 0.805556 | 1.260807e-49 | -8.615850e-47 |
Msa0329430 | Msa0665080 | 0.812980 | 3.226351e-51 | -8.615850e-47 |
Msa0347750 | Msa0665080 | 0.818981 | 1.475997e-52 | -8.615850e-47 |
Msa0358860 | Msa0665080 | 0.814171 | 1.764869e-51 | -8.615850e-47 |
Msa0482940 | Msa0665080 | 0.820888 | 5.407160e-53 | -8.615850e-47 |
Msa0489660 | Msa0665080 | 0.801430 | 9.035898e-49 | -8.615850e-47 |
Msa0491000 | Msa0665080 | 0.806927 | 6.486614e-50 | -8.615850e-47 |
Msa0500470 | Msa0665080 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
Msa0514180 | Msa0665080 | 0.812862 | 3.423618e-51 | -8.615850e-47 |
Msa0518170 | Msa0665080 | 0.821497 | 3.912508e-53 | -8.615850e-47 |
Msa0524600 | Msa0665080 | 0.811148 | 8.091703e-51 | -8.615850e-47 |
Msa0527910 | Msa0665080 | 0.820681 | 6.031986e-53 | -8.615850e-47 |
Msa0531250 | Msa0665080 | 0.810490 | 1.123505e-50 | -8.615850e-47 |
Msa0532980 | Msa0665080 | 0.812282 | 4.586123e-51 | -8.615850e-47 |
Msa0534410 | Msa0665080 | 0.811423 | 7.053439e-51 | -8.615850e-47 |
Msa0534900 | Msa0665080 | 0.808922 | 2.441047e-50 | -8.615850e-47 |
Msa0542560 | Msa0665080 | 0.808705 | 2.716239e-50 | -8.615850e-47 |
Msa0549780 | Msa0665080 | 0.823821 | 1.126769e-53 | -8.615850e-47 |
Msa0550540 | Msa0665080 | 0.806496 | 7.998238e-50 | -8.615850e-47 |
Msa0550570 | Msa0665080 | 0.803684 | 3.099185e-49 | -8.615850e-47 |
Msa0556790 | Msa0665080 | 0.805895 | 1.070289e-49 | -8.615850e-47 |
Msa0566350 | Msa0665080 | 0.805073 | 1.592098e-49 | -8.615850e-47 |
Msa0569780 | Msa0665080 | 0.801670 | 8.071373e-49 | -8.615850e-47 |
Msa0587030 | Msa0665080 | 0.823051 | 1.705162e-53 | -8.615850e-47 |
Msa0588090 | Msa0665080 | 0.804146 | 2.485287e-49 | -8.615850e-47 |
Msa0588240 | Msa0665080 | 0.828992 | 6.602544e-55 | -8.615850e-47 |
Msa0590650 | Msa0665080 | 0.819703 | 1.010225e-52 | -8.615850e-47 |
Msa0597000 | Msa0665080 | 0.800619 | 1.323982e-48 | -8.615850e-47 |
Msa0600080 | Msa0665080 | 0.811701 | 6.137115e-51 | -8.615850e-47 |
Msa0600450 | Msa0665080 | 0.801560 | 8.500353e-49 | -8.615850e-47 |
Msa0602370 | Msa0665080 | 0.861695 | 8.561463e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0665080 | MtrunA17_Chr4g0003161 | 98.185 | 496 | 9 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1009 |
Msa0665080 | MtrunA17_Chr2g0333241 | 76.673 | 493 | 91 | 2 | 1 | 493 | 1 | 469 | 0.0 | 775 |
Msa0665080 | MtrunA17_Chr7g0253251 | 47.561 | 328 | 99 | 11 | 17 | 325 | 1 | 274 | 2.66e-77 | 244 |
Msa0665080 | MtrunA17_Chr7g0266491 | 29.935 | 461 | 295 | 9 | 1 | 447 | 62 | 508 | 4.44e-58 | 201 |
Msa0665080 | MtrunA17_Chr7g0253151 | 66.443 | 149 | 38 | 3 | 183 | 325 | 5 | 147 | 7.23e-56 | 184 |
Msa0665080 | MtrunA17_Chr7g0253161 | 43.787 | 169 | 65 | 4 | 1 | 165 | 1 | 143 | 3.14e-35 | 129 |
Msa0665080 | MtrunA17_Chr8g0350161 | 30.508 | 295 | 189 | 4 | 15 | 295 | 76 | 368 | 2.78e-33 | 129 |
Msa0665080 | MtrunA17_Chr4g0073891 | 31.088 | 193 | 122 | 2 | 114 | 295 | 438 | 630 | 9.89e-26 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0665080 | AT1G48900.1 | 87.221 | 493 | 63 | 0 | 1 | 493 | 1 | 493 | 0.0 | 906 |
Msa0665080 | AT5G49500.1 | 77.465 | 497 | 110 | 1 | 1 | 495 | 1 | 497 | 0.0 | 796 |
Msa0665080 | AT1G15310.1 | 77.526 | 485 | 93 | 3 | 1 | 485 | 1 | 469 | 0.0 | 772 |
Msa0665080 | AT1G48900.2 | 85.349 | 430 | 60 | 2 | 1 | 430 | 1 | 427 | 0.0 | 768 |
Msa0665080 | AT5G49500.2 | 80.541 | 370 | 72 | 0 | 126 | 495 | 6 | 375 | 0.0 | 624 |
Msa0665080 | AT5G03940.1 | 29.245 | 424 | 282 | 5 | 6 | 421 | 81 | 494 | 2.25e-57 | 200 |
Msa0665080 | AT5G66970.1 | 42.105 | 171 | 96 | 2 | 1 | 171 | 1 | 168 | 1.88e-35 | 130 |
Msa0665080 | AT2G45770.1 | 30.303 | 297 | 187 | 5 | 15 | 295 | 73 | 365 | 1.33e-31 | 125 |
Msa0665080 | AT4G30600.2 | 31.088 | 193 | 122 | 2 | 114 | 295 | 441 | 633 | 1.43e-25 | 110 |
Msa0665080 | AT4G30600.1 | 31.088 | 193 | 122 | 2 | 114 | 295 | 441 | 633 | 1.43e-25 | 110 |
Find 130 sgRNAs with CRISPR-Local
Find 563 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCAAGAATTTGGGGATTT+AGG | 0.076946 | 4_4:+4392787 | None:intergenic |
GATTTCTCAGATCAAGAATT+TGG | 0.163090 | 4_4:+4392778 | None:intergenic |
CCTATTACTTTGCAGCTATA+TGG | 0.228796 | 4_4:-4387484 | Msa0665080:intron |
ATTAACAATCTTCTTAATAT+TGG | 0.234181 | 4_4:+4392582 | None:intergenic |
ATCAAGAATTTGGGGATTTA+GGG | 0.252385 | 4_4:+4392788 | None:intergenic |
CCATTTGTCAGTCGTCTATT+AGG | 0.261155 | 4_4:-4386845 | Msa0665080:intron |
CGTGACTCATTCATGAGCTT+TGG | 0.261469 | 4_4:+4386026 | None:intergenic |
GAACTCATTTCTCCCTTCTT+TGG | 0.270678 | 4_4:+4385891 | None:intergenic |
AAGATGGTGCTCGCAGATTT+AGG | 0.285184 | 4_4:-4392745 | Msa0665080:CDS |
TCAGGCCAGGGAGACTTGTC+TGG | 0.286825 | 4_4:-4386645 | Msa0665080:intron |
CTGTCCTGATCCTTGCCTTT+TGG | 0.304349 | 4_4:+4386248 | None:intergenic |
ATTTCTCAGATCAAGAATTT+GGG | 0.322852 | 4_4:+4392779 | None:intergenic |
GAGGTTCTGGTCGACAAGTT+AGG | 0.324653 | 4_4:-4385986 | Msa0665080:CDS |
GAAATCGATGGGATCTAATA+AGG | 0.327013 | 4_4:-4385772 | Msa0665080:CDS |
GGCGAGCAGTAGGTTCTTAA+TGG | 0.328753 | 4_4:-4385723 | Msa0665080:exon |
TGCAGCTTATTAAGCAGTTC+AGG | 0.332627 | 4_4:+4386579 | None:intergenic |
GGAGTGAAAGCAGGCTTTCC+AGG | 0.340451 | 4_4:+4389726 | None:intergenic |
TTTGGGGATTTAGGGTTTGA+TGG | 0.343522 | 4_4:+4392796 | None:intergenic |
CAACACTCTGTTTAAATGCT+TGG | 0.344126 | 4_4:+4387173 | None:intergenic |
CCACAGATGCTAAAGCAAAT+TGG | 0.344130 | 4_4:-4385822 | Msa0665080:CDS |
ATGCGTATAGCTCGAGGTTC+TGG | 0.344763 | 4_4:-4385999 | Msa0665080:CDS |
GTGACTCATTCATGAGCTTT+GGG | 0.360788 | 4_4:+4386027 | None:intergenic |
AAAGCTAAGATCCCTTTCTA+TGG | 0.370177 | 4_4:-4389264 | Msa0665080:CDS |
ATACCGTTGCTTCCGAAACT+TGG | 0.375298 | 4_4:+4387337 | None:intergenic |
GTAATCTATGCAGTTTGAAT+TGG | 0.391907 | 4_4:-4385630 | Msa0665080:three_prime_UTR |
TGAAGAAATGCGCCAAGTTT+CGG | 0.395551 | 4_4:-4387349 | Msa0665080:CDS |
GACATTCATGTTTCGAGATA+AGG | 0.395944 | 4_4:+4385869 | None:intergenic |
GATCCATTGGAACAACTTCA+TGG | 0.399514 | 4_4:+4386607 | None:intergenic |
CTGATTCACAACAAATACTT+TGG | 0.402378 | 4_4:+4385462 | None:intergenic |
AACACTCTGTTTAAATGCTT+GGG | 0.406606 | 4_4:+4387174 | None:intergenic |
ATAGAAAGGGATCTTAGCTT+TGG | 0.412663 | 4_4:+4389266 | None:intergenic |
CAATGAGCTCTGCAATATCT+TGG | 0.413074 | 4_4:-4389751 | Msa0665080:CDS |
GTTTCAGAATATTCTTAAGA+TGG | 0.414472 | 4_4:-4386520 | Msa0665080:CDS |
CCCGTCATATTCATTGGAAC+TGG | 0.417778 | 4_4:-4386905 | Msa0665080:CDS |
AAGGACATGATGGGAATGTT+TGG | 0.422905 | 4_4:-4385753 | Msa0665080:CDS |
ATGGGAATGTTTGGCGGCGG+TGG | 0.436163 | 4_4:-4385744 | Msa0665080:CDS |
ACAAGCGTCTCGCAAAGATA+TGG | 0.438419 | 4_4:-4385938 | Msa0665080:CDS |
CCAATTTGCTTTAGCATCTG+TGG | 0.443903 | 4_4:+4385822 | None:intergenic |
CTGCCAAGGTAATTAACTAA+TGG | 0.444851 | 4_4:+4385561 | None:intergenic |
TTTATCATCAAAAGAAAGGC+TGG | 0.445583 | 4_4:-4389356 | Msa0665080:CDS |
AAGAGTCCCGTCATATTCAT+TGG | 0.446556 | 4_4:-4386911 | Msa0665080:CDS |
TTTGAATGATTTCAGGATCT+GGG | 0.449312 | 4_4:-4389407 | Msa0665080:intron |
TAGGGAAGTAATGGAGATGA+TGG | 0.449379 | 4_4:-4385967 | Msa0665080:CDS |
TTTGTCATGGATAGCAGTAT+TGG | 0.450799 | 4_4:-4387217 | Msa0665080:CDS |
CAAGATTACCTTCCATAGAA+AGG | 0.453471 | 4_4:+4389252 | None:intergenic |
AGGTTCTGGTCGACAAGTTA+GGG | 0.462023 | 4_4:-4385985 | Msa0665080:CDS |
GGCCATGAATTAGTACCAAA+AGG | 0.464017 | 4_4:-4386263 | Msa0665080:CDS |
GTCATGTTCGTTGGTTTACA+AGG | 0.464635 | 4_4:-4389681 | Msa0665080:intron |
TAGTAAATATACAGCAATTG+AGG | 0.468692 | 4_4:+4385500 | None:intergenic |
AGGGCTTAAAATACCAAAGA+AGG | 0.470429 | 4_4:-4385904 | Msa0665080:CDS |
AGATCTTGTTATCTTTGTCA+TGG | 0.480044 | 4_4:-4387230 | Msa0665080:CDS |
TTTCAGAATATTCTTAAGAT+GGG | 0.482656 | 4_4:-4386519 | Msa0665080:CDS |
CATGGATAGCAGTATTGGTC+AGG | 0.485878 | 4_4:-4387212 | Msa0665080:CDS |
ATGACAAAGATAACAAGATC+TGG | 0.486961 | 4_4:+4387232 | None:intergenic |
GGGATCTAATAAGGACATGA+TGG | 0.488421 | 4_4:-4385763 | Msa0665080:CDS |
CTCTGCAATATCTTGGATCC+TGG | 0.490760 | 4_4:-4389744 | Msa0665080:CDS |
AGTACCAAAAGGCAAGGATC+AGG | 0.491706 | 4_4:-4386252 | Msa0665080:CDS |
CTTATAATTGTTGATACTAG+TGG | 0.492017 | 4_4:-4387399 | Msa0665080:CDS |
AATCTTGATGATCTTGCTGC+TGG | 0.492553 | 4_4:-4392562 | Msa0665080:CDS |
CTAAAGCAAATTGGAGGAAT+GGG | 0.493593 | 4_4:-4385813 | Msa0665080:CDS |
TGGCGGCGGTGGCGAGCAGT+AGG | 0.495152 | 4_4:-4385733 | Msa0665080:exon |
GCTAGTGTTGTCATGTTCGT+TGG | 0.496689 | 4_4:-4389690 | Msa0665080:CDS |
ATGGACTCAATGACAAATGA+AGG | 0.500602 | 4_4:-4386194 | Msa0665080:intron |
GTACATAATCCTCAAGGTAA+AGG | 0.502143 | 4_4:+4386548 | None:intergenic |
AAGAGTTTCTTCGATGCGAA+TGG | 0.507873 | 4_4:+4394416 | None:intergenic |
AGTAAATATACAGCAATTGA+GGG | 0.509697 | 4_4:+4385501 | None:intergenic |
AGGCAAGGATCAGGACAGCC+AGG | 0.513089 | 4_4:-4386243 | Msa0665080:CDS |
GCTAAAGCAAATTGGAGGAA+TGG | 0.513724 | 4_4:-4385814 | Msa0665080:CDS |
AAGATTACCTTCCATAGAAA+GGG | 0.516707 | 4_4:+4389253 | None:intergenic |
AGTTCAGGCTGTTGATCCAT+TGG | 0.517338 | 4_4:+4386594 | None:intergenic |
GAAATCAATCTTGATCAAGA+TGG | 0.517773 | 4_4:-4392761 | Msa0665080:exon |
ACTAATTCATGGCCAAATCC+TGG | 0.519647 | 4_4:+4386272 | None:intergenic |
CCTAATAGACGACTGACAAA+TGG | 0.523880 | 4_4:+4386845 | None:intergenic |
CAGGCCAGGGAGACTTGTCT+GGG | 0.527597 | 4_4:-4386644 | Msa0665080:CDS |
TTATAATTGTTGATACTAGT+GGG | 0.532166 | 4_4:-4387398 | Msa0665080:CDS |
GAACTTCTCTCCACAGGAGA+AGG | 0.533313 | 4_4:-4385396 | Msa0665080:three_prime_UTR |
AATCCATGAAGTTGTTCCAA+TGG | 0.540168 | 4_4:-4386610 | Msa0665080:CDS |
AAAATGGATGGCCATGCAAA+GGG | 0.540546 | 4_4:-4387127 | Msa0665080:CDS |
CTAAGATCCCTTTCTATGGA+AGG | 0.541043 | 4_4:-4389260 | Msa0665080:intron |
GATGGCCATGCAAAGGGTGG+TGG | 0.543431 | 4_4:-4387121 | Msa0665080:CDS |
AAGATATGGAGCAAAATGAA+AGG | 0.553586 | 4_4:-4385924 | Msa0665080:CDS |
GCGCACCACCACCCTTTGCA+TGG | 0.554323 | 4_4:+4387116 | None:intergenic |
GTATCTGCACATACTAGAGC+TGG | 0.555721 | 4_4:+4389330 | None:intergenic |
GGGCCATTAGTTAATTACCT+TGG | 0.556737 | 4_4:-4385564 | Msa0665080:three_prime_UTR |
CCAGTTCCAATGAATATGAC+GGG | 0.558074 | 4_4:+4386905 | None:intergenic |
ACAAAGCTTGATGAAATCGA+TGG | 0.558585 | 4_4:-4385784 | Msa0665080:CDS |
TCTGACCGCAGAAATCTCAA+TGG | 0.560687 | 4_4:-4385585 | Msa0665080:three_prime_UTR |
TGAACCCAGACAAGTCTCCC+TGG | 0.565640 | 4_4:+4386640 | None:intergenic |
GAACTCTTATGAAGCACAAG+AGG | 0.565713 | 4_4:+4385666 | None:intergenic |
TAAGCGTTACATGACAATGA+TGG | 0.566456 | 4_4:-4386213 | Msa0665080:CDS |
AGATATGGAGCAAAATGAAA+GGG | 0.567829 | 4_4:-4385923 | Msa0665080:CDS |
GACATGATGGGAATGTTTGG+CGG | 0.570743 | 4_4:-4385750 | Msa0665080:CDS |
TTTAAACAGAGTGTTGCAGT+TGG | 0.573047 | 4_4:-4387166 | Msa0665080:CDS |
CTGACCGCAGAAATCTCAAT+GGG | 0.574030 | 4_4:-4385584 | Msa0665080:three_prime_UTR |
TCGACAAGTTAGGGAAGTAA+TGG | 0.575282 | 4_4:-4385976 | Msa0665080:CDS |
TAAATCGAACTTCTCTCCAC+AGG | 0.577966 | 4_4:-4385402 | Msa0665080:three_prime_UTR |
CATTGGAACTGGAGAACACA+TGG | 0.583180 | 4_4:-4386894 | Msa0665080:CDS |
CTGCTTAATAAGCTGCAAGA+AGG | 0.584033 | 4_4:-4386573 | Msa0665080:CDS |
CAAAGCTTGATGAAATCGAT+GGG | 0.588981 | 4_4:-4385783 | Msa0665080:CDS |
GGATCTAATAAGGACATGAT+GGG | 0.588990 | 4_4:-4385762 | Msa0665080:CDS |
AACAAGCTTGAATTGAACAT+CGG | 0.590449 | 4_4:+4392618 | None:intergenic |
TCCAGTTCCAATGAATATGA+CGG | 0.593096 | 4_4:+4386904 | None:intergenic |
TAATGGCTTATGCGCTGCCG+AGG | 0.595769 | 4_4:-4385706 | Msa0665080:three_prime_UTR |
ATTTGCTTTAGCATCTGTGG+AGG | 0.599015 | 4_4:+4385825 | None:intergenic |
TGAATTAGTACCAAAAGGCA+AGG | 0.600112 | 4_4:-4386258 | Msa0665080:CDS |
TGTGCAGATACATTCAGAGC+TGG | 0.600759 | 4_4:-4389318 | Msa0665080:CDS |
AAGCAAATTGGAGGAATGGG+TGG | 0.601558 | 4_4:-4385810 | Msa0665080:CDS |
CAGATGCTAAAGCAAATTGG+AGG | 0.603876 | 4_4:-4385819 | Msa0665080:CDS |
GCGCCAAGTTTCGGAAGCAA+CGG | 0.608253 | 4_4:-4387340 | Msa0665080:intron |
GGGCTTAAAATACCAAAGAA+GGG | 0.608894 | 4_4:-4385903 | Msa0665080:CDS |
TTTGCTTTAGCATCTGTGGA+GGG | 0.610701 | 4_4:+4385826 | None:intergenic |
GCTTTAGCATCTGTGGAGGG+AGG | 0.611539 | 4_4:+4385829 | None:intergenic |
AGCAAATTGGAGGAATGGGT+GGG | 0.615310 | 4_4:-4385809 | Msa0665080:CDS |
AAGAAGGAACCTTTACCTTG+AGG | 0.616437 | 4_4:-4386557 | Msa0665080:CDS |
ATGGTGCTCGCAGATTTAGG+AGG | 0.616535 | 4_4:-4392742 | Msa0665080:CDS |
CTGCTCGTACATAATCCTCA+AGG | 0.625136 | 4_4:+4386542 | None:intergenic |
ATGATGGGAATGTTTGGCGG+CGG | 0.634083 | 4_4:-4385747 | Msa0665080:CDS |
GAAAATTGCTGTGGAAGGTG+TGG | 0.635052 | 4_4:-4387448 | Msa0665080:CDS |
TAAGATGGGTCCCATGAGCG+AGG | 0.637224 | 4_4:-4386505 | Msa0665080:intron |
CAAAGCTCATGAATGAGTCA+CGG | 0.644435 | 4_4:-4386025 | Msa0665080:CDS |
TGGTGCTCGCAGATTTAGGA+GGG | 0.645588 | 4_4:-4392741 | Msa0665080:CDS |
TTTCTCAGATCAAGAATTTG+GGG | 0.652509 | 4_4:+4392780 | None:intergenic |
TGAGTATGAACCTTCTCCTG+TGG | 0.659601 | 4_4:+4385386 | None:intergenic |
CCTGTGAAAATTGCTGTGGA+AGG | 0.664105 | 4_4:-4387453 | Msa0665080:CDS |
AGATCCTGTGAAAATTGCTG+TGG | 0.670741 | 4_4:-4387457 | Msa0665080:CDS |
ATGGCCCATTGAGATTTCTG+CGG | 0.681516 | 4_4:+4385580 | None:intergenic |
ATGGATGGCCATGCAAAGGG+TGG | 0.687249 | 4_4:-4387124 | Msa0665080:CDS |
CGGATGATGCGTATAGCTCG+AGG | 0.687350 | 4_4:-4386005 | Msa0665080:CDS |
TAATTGTTGATACTAGTGGG+CGG | 0.701070 | 4_4:-4387395 | Msa0665080:CDS |
AAGTAATCAGAAACAAACCT+CGG | 0.701173 | 4_4:+4385689 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATATTAAACATAATAG+GGG | + | chr4_4:4393342-4393361 | None:intergenic | 10.0% |
!! | ATTAACAATCTTCTTAATAT+TGG | + | chr4_4:4385664-4385683 | None:intergenic | 15.0% |
!! | TGATAAACCAAATAAAATAT+TGG | + | chr4_4:4385756-4385775 | None:intergenic | 15.0% |
!! | ATTAACAATCTTCTTAATAT+TGG | + | chr4_4:4385664-4385683 | None:intergenic | 15.0% |
!! | AATAAAAAAATTGAAGAAAG+AGG | + | chr4_4:4387320-4387339 | None:intergenic | 15.0% |
!!! | AAATTAATTTTGACATGTTT+TGG | + | chr4_4:4388609-4388628 | None:intergenic | 15.0% |
!!! | GAATTGATTCTAAAAAAAAA+GGG | + | chr4_4:4388831-4388850 | None:intergenic | 15.0% |
!!! | AGAATTGATTCTAAAAAAAA+AGG | + | chr4_4:4388832-4388851 | None:intergenic | 15.0% |
!! | AAACTATAAGAAAATTACAT+TGG | + | chr4_4:4388929-4388948 | None:intergenic | 15.0% |
!!! | ATTTTGGAATATACTTAATT+AGG | - | chr4_4:4389003-4389022 | Msa0665080:intron | 15.0% |
!! | ATAAATATTACTTTAACAAC+TGG | + | chr4_4:4389781-4389800 | None:intergenic | 15.0% |
!! | AGTAGGTAATTATATTTAAT+CGG | + | chr4_4:4390168-4390187 | None:intergenic | 15.0% |
!! | ATAAAACAATATTAATCTGA+AGG | + | chr4_4:4390706-4390725 | None:intergenic | 15.0% |
!!! | TAATTGTTGTTTTTTTAAGA+AGG | - | chr4_4:4391648-4391667 | Msa0665080:intron | 15.0% |
!!! | AATTGTTGTTTTTTTAAGAA+GGG | - | chr4_4:4391649-4391668 | Msa0665080:intron | 15.0% |
!!! | AAAGAATGCTTTTTAATTTT+TGG | + | chr4_4:4392137-4392156 | None:intergenic | 15.0% |
!!! | TTGCTTGAATTATTTTTTTT+TGG | - | chr4_4:4392300-4392319 | Msa0665080:intron | 15.0% |
!! | AACATCATATTTATATAAGT+TGG | + | chr4_4:4392779-4392798 | None:intergenic | 15.0% |
!! | ATTATATTAAACATAATAGG+GGG | + | chr4_4:4393341-4393360 | None:intergenic | 15.0% |
!!! | ATTTTTGAGATGAAGAATTT+GGG | + | chr4_4:4385467-4385486 | None:intergenic | 20.0% |
!!! | TCTTTCTCCAATATTTTATT+TGG | - | chr4_4:4385746-4385765 | Msa0665080:CDS | 20.0% |
!! | AGAAAATTGTAACATTTAGA+AGG | + | chr4_4:4386153-4386172 | None:intergenic | 20.0% |
!! | TAATCAACATTAACATTTGA+AGG | + | chr4_4:4386261-4386280 | None:intergenic | 20.0% |
!! | AAGAAGATCTTAAATTTGAA+TGG | + | chr4_4:4386523-4386542 | None:intergenic | 20.0% |
!! | GTATTAATTTAGTGTATGTT+TGG | - | chr4_4:4387375-4387394 | Msa0665080:CDS | 20.0% |
!! | TTGTATTGTTTCAATTAATG+TGG | - | chr4_4:4387684-4387703 | Msa0665080:intron | 20.0% |
!! | TGTATTGTTTCAATTAATGT+GGG | - | chr4_4:4387685-4387704 | Msa0665080:intron | 20.0% |
!! | TGATGAAATAAATAGTTTGA+GGG | - | chr4_4:4387721-4387740 | Msa0665080:intron | 20.0% |
!! | TTGATTGTGTAAAATTATTC+TGG | - | chr4_4:4387746-4387765 | Msa0665080:intron | 20.0% |
!!! | CTTCAAGTTATAATCAATTT+TGG | + | chr4_4:4388303-4388322 | None:intergenic | 20.0% |
!! | TATAACTTGAAGCTAAAAAT+TGG | - | chr4_4:4388311-4388330 | Msa0665080:intron | 20.0% |
!!! | AATGTAAAGTGGTATATTTT+TGG | - | chr4_4:4388454-4388473 | Msa0665080:intron | 20.0% |
!! | TTTGGATATTTATGTATGTT+TGG | + | chr4_4:4388867-4388886 | None:intergenic | 20.0% |
!! | CATACATAAATATCCAAATT+TGG | - | chr4_4:4388869-4388888 | Msa0665080:intron | 20.0% |
!!! | ATTTTTTGTTCAGTTTGTAT+TGG | + | chr4_4:4388955-4388974 | None:intergenic | 20.0% |
!! | GTATAATATGAACAAAAAGT+AGG | + | chr4_4:4390185-4390204 | None:intergenic | 20.0% |
!!! | CTATTGCTATTTATTTTCAA+TGG | - | chr4_4:4390346-4390365 | Msa0665080:intron | 20.0% |
!!! | TATTCTTTTTGAATGATTTC+AGG | - | chr4_4:4390402-4390421 | Msa0665080:intron | 20.0% |
!!! | ATATTATATGGATTTTGTCA+TGG | - | chr4_4:4390797-4390816 | Msa0665080:intron | 20.0% |
!!! | ATGTAAATTTTTTCCTGAAA+AGG | + | chr4_4:4391014-4391033 | None:intergenic | 20.0% |
!!! | TCAGGAAAAAATTTACATTT+TGG | - | chr4_4:4391016-4391035 | Msa0665080:intron | 20.0% |
!!! | AATTTACATTTTGGTTTTCT+AGG | - | chr4_4:4391025-4391044 | Msa0665080:intron | 20.0% |
!!! | ATTTACATTTTGGTTTTCTA+GGG | - | chr4_4:4391026-4391045 | Msa0665080:intron | 20.0% |
!!! | TTGTTCTGTTATTTGAATTT+GGG | - | chr4_4:4391197-4391216 | Msa0665080:intron | 20.0% |
!! | GAAAATTTGAATTGAGTAAT+TGG | - | chr4_4:4391234-4391253 | Msa0665080:intron | 20.0% |
!!! | ATTGTTGTTTTTTTAAGAAG+GGG | - | chr4_4:4391650-4391669 | Msa0665080:intron | 20.0% |
!! | GAAAGATAATTATGATATGA+AGG | - | chr4_4:4391682-4391701 | Msa0665080:intron | 20.0% |
!!! | CTCTTTTTTCTTTATTTTTG+CGG | - | chr4_4:4392209-4392228 | Msa0665080:intron | 20.0% |
!! | TTATAATTGTTGATACTAGT+GGG | - | chr4_4:4392418-4392437 | Msa0665080:intron | 20.0% |
!! | AAACATAATACGATTATATC+AGG | + | chr4_4:4392743-4392762 | None:intergenic | 20.0% |
!!! | ATGATGATGATAACAAAAAA+AGG | + | chr4_4:4392833-4392852 | None:intergenic | 20.0% |
!!! | ATTTTTTTTGTTTAGTGTTG+CGG | - | chr4_4:4392877-4392896 | Msa0665080:intron | 20.0% |
!! | TTAATGTACATGATTGAAAA+AGG | + | chr4_4:4393106-4393125 | None:intergenic | 20.0% |
!! | TTTCAGAATATTCTTAAGAT+GGG | - | chr4_4:4393297-4393316 | Msa0665080:intron | 20.0% |
!!! | AATTAATGGTTGATTTATGT+AGG | - | chr4_4:4393507-4393526 | Msa0665080:intron | 20.0% |
!! | AAAAAAAAAAAAAACTGCCA+AGG | + | chr4_4:4394272-4394291 | None:intergenic | 20.0% |
!!! | GATTTTTGAGATGAAGAATT+TGG | + | chr4_4:4385468-4385487 | None:intergenic | 25.0% |
! | AAAATCTTCTTTCTTCAAGA+TGG | - | chr4_4:4385482-4385501 | Msa0665080:three_prime_UTR | 25.0% |
! | CAAATTCTCTATTCACAATA+TGG | - | chr4_4:4386017-4386036 | Msa0665080:CDS | 25.0% |
! | AAAATGTAGAAAAATGCACA+AGG | + | chr4_4:4386192-4386211 | None:intergenic | 25.0% |
! | NNNNNNNTGCATCCTAATGA+AGG | - | chr4_4:4386385-4386404 | Msa0665080:intron | 25.0% |
!!! | TAATTGGAACAGTTTTATTG+AGG | + | chr4_4:4386432-4386451 | None:intergenic | 25.0% |
! | GATCTTCTTGATTTAAATAG+AGG | - | chr4_4:4386534-4386553 | Msa0665080:CDS | 25.0% |
!! | ATGAATACAATCAACTTTTG+AGG | + | chr4_4:4386685-4386704 | None:intergenic | 25.0% |
! | AAGATTAATAATCTCAAGCA+AGG | - | chr4_4:4386723-4386742 | Msa0665080:intron | 25.0% |
! | AGATTAATAATCTCAAGCAA+GGG | - | chr4_4:4386724-4386743 | Msa0665080:intron | 25.0% |
! | ATTTCTCAGATCAAGAATTT+GGG | + | chr4_4:4387040-4387059 | None:intergenic | 25.0% |
! | ATTTAGTGTATGTTTGGTTA+TGG | - | chr4_4:4387381-4387400 | Msa0665080:CDS | 25.0% |
! | TTTAGTGTATGTTTGGTTAT+GGG | - | chr4_4:4387382-4387401 | Msa0665080:CDS | 25.0% |
!! | AAGTGAGTTGAATGATAAAT+TGG | - | chr4_4:4387509-4387528 | Msa0665080:intron | 25.0% |
! | GATATGTACTCAAAAGAAAA+AGG | + | chr4_4:4387644-4387663 | None:intergenic | 25.0% |
!!! | TTTTGAGTACATATCTAACT+GGG | - | chr4_4:4387649-4387668 | Msa0665080:intron | 25.0% |
! | GTGATGAAATAAATAGTTTG+AGG | - | chr4_4:4387720-4387739 | Msa0665080:intron | 25.0% |
!! | CTTCAAGTTAGAATCAATTA+TGG | - | chr4_4:4388202-4388221 | Msa0665080:intron | 25.0% |
!! | CAAGTTATAATCAATTTTGG+AGG | + | chr4_4:4388300-4388319 | None:intergenic | 25.0% |
!! | TAGAATCAATTCTCTAAAAG+TGG | - | chr4_4:4388839-4388858 | Msa0665080:intron | 25.0% |
! | TTTATACCATCTACAATTTC+AGG | + | chr4_4:4388897-4388916 | None:intergenic | 25.0% |
!! | TACAATTTGAGAGACTATTT+TGG | - | chr4_4:4388987-4389006 | Msa0665080:intron | 25.0% |
! | TGATATAGTGATACAATTTC+AGG | - | chr4_4:4389027-4389046 | Msa0665080:intron | 25.0% |
! | TATATTCTATTCTGCATTAG+AGG | - | chr4_4:4389089-4389108 | Msa0665080:intron | 25.0% |
!!! | GTTAGACTTTAGAGTTATTT+TGG | - | chr4_4:4389216-4389235 | Msa0665080:intron | 25.0% |
! | ATTAAACTGAAAACAACTGA+TGG | - | chr4_4:4389390-4389409 | Msa0665080:CDS | 25.0% |
!! | GATTTCAACTTTTCTTTCAA+AGG | + | chr4_4:4389553-4389572 | None:intergenic | 25.0% |
! | TTTAACAACTGGAATTGAAT+GGG | + | chr4_4:4389770-4389789 | None:intergenic | 25.0% |
! | CATATTTCATCCTTTGAATT+TGG | - | chr4_4:4389855-4389874 | Msa0665080:intron | 25.0% |
! | TTGATCTTAGAATTTAGAAG+AGG | - | chr4_4:4389904-4389923 | Msa0665080:intron | 25.0% |
! | TTAAACCACTAACAAAAACA+CGG | + | chr4_4:4389946-4389965 | None:intergenic | 25.0% |
!!! | TTACAAACTCTTTTGATTCT+AGG | - | chr4_4:4390035-4390054 | Msa0665080:intron | 25.0% |
! | ATAGACAACCAATAATTGTA+AGG | + | chr4_4:4390330-4390349 | None:intergenic | 25.0% |
!! | GCATTTTATCATCAAAAGAA+AGG | - | chr4_4:4390456-4390475 | Msa0665080:intron | 25.0% |
! | TATTAGACATGCTTTATACA+TGG | - | chr4_4:4390723-4390742 | Msa0665080:intron | 25.0% |
! | GCAAAGACAGTTATATTATA+TGG | - | chr4_4:4390785-4390804 | Msa0665080:intron | 25.0% |
! | GAAAGACAATTATGATATGA+AGG | - | chr4_4:4390895-4390914 | Msa0665080:intron | 25.0% |
! | CATGTATAGTTGTTAGAAAT+TGG | - | chr4_4:4390935-4390954 | Msa0665080:intron | 25.0% |
! | TCTAGATTAGAAGTTAATGT+CGG | - | chr4_4:4390971-4390990 | Msa0665080:intron | 25.0% |
! | AATTGAGTAACTGATTATGT+TGG | - | chr4_4:4391161-4391180 | Msa0665080:intron | 25.0% |
!! | GTTGTTCTGTTATTTGAATT+TGG | - | chr4_4:4391196-4391215 | Msa0665080:intron | 25.0% |
! | AATTTGCAAATAGGCAAAAA+AGG | + | chr4_4:4391498-4391517 | None:intergenic | 25.0% |
! | TTGTCTATTCACAAATTTCA+AGG | - | chr4_4:4391549-4391568 | Msa0665080:intron | 25.0% |
!! | TCTAGTTTAGAAGTTAAAGT+CGG | - | chr4_4:4391758-4391777 | Msa0665080:intron | 25.0% |
! | GCAATGTTAAAAGTGATTAT+TGG | + | chr4_4:4391906-4391925 | None:intergenic | 25.0% |
! | AAGAACATAAGGAATTGAAA+AGG | + | chr4_4:4391977-4391996 | None:intergenic | 25.0% |
! | TTATTGCAAGAAAGAACATA+AGG | + | chr4_4:4391988-4392007 | None:intergenic | 25.0% |
! | ATGTTCTTTCTTGCAATAAA+AGG | - | chr4_4:4391989-4392008 | Msa0665080:intron | 25.0% |
! | TGTTCTTTCTTGCAATAAAA+GGG | - | chr4_4:4391990-4392009 | Msa0665080:intron | 25.0% |
! | ATGCTATGTTATTGTTCTAT+TGG | - | chr4_4:4392089-4392108 | Msa0665080:intron | 25.0% |
!!! | TTCTTTTTTTCTTTATCCCA+AGG | - | chr4_4:4392151-4392170 | Msa0665080:intron | 25.0% |
! | TAAAGAAAAAAGAGGAGAAA+TGG | + | chr4_4:4392203-4392222 | None:intergenic | 25.0% |
! | CGCAAAAATAAAGAAAAAAG+AGG | + | chr4_4:4392211-4392230 | None:intergenic | 25.0% |
! | CTTATAATTGTTGATACTAG+TGG | - | chr4_4:4392417-4392436 | Msa0665080:intron | 25.0% |
! | AGCTGTAATTATCACAAAAA+TGG | - | chr4_4:4392673-4392692 | Msa0665080:CDS | 25.0% |
! | GTAATTATCACAAAAATGGA+TGG | - | chr4_4:4392677-4392696 | Msa0665080:CDS | 25.0% |
! | AAGTATATACATGCTTGAAA+AGG | + | chr4_4:4393045-4393064 | None:intergenic | 25.0% |
!! | TTCAAGCATGTATATACTTT+TGG | - | chr4_4:4393046-4393065 | Msa0665080:intron | 25.0% |
! | GATTAATATAAAGGGAAAAC+TGG | + | chr4_4:4393133-4393152 | None:intergenic | 25.0% |
! | GTTTCAGAATATTCTTAAGA+TGG | - | chr4_4:4393296-4393315 | Msa0665080:intron | 25.0% |
!!! | GGAAACAAAATAGTTTTACA+CGG | + | chr4_4:4394297-4394316 | None:intergenic | 25.0% |
! | AGTAAATATACAGCAATTGA+GGG | + | chr4_4:4394318-4394337 | None:intergenic | 25.0% |
! | TAGTAAATATACAGCAATTG+AGG | + | chr4_4:4394319-4394338 | None:intergenic | 25.0% |
! | GATGAAGAATTTGGGATTTA+GGG | + | chr4_4:4385459-4385478 | None:intergenic | 30.0% |
! | AGATGAAGAATTTGGGATTT+AGG | + | chr4_4:4385460-4385479 | None:intergenic | 30.0% |
TTGTTGCTGGTCATAATAAA+CGG | - | chr4_4:4385694-4385713 | Msa0665080:three_prime_UTR | 30.0% | |
GTATCAATTAATTGCGTGTT+TGG | - | chr4_4:4385792-4385811 | Msa0665080:CDS | 30.0% | |
AAAGAACACAAAGAGATGAA+GGG | + | chr4_4:4385991-4386010 | None:intergenic | 30.0% | |
AAGGAATATTGCAGAAAATG+TGG | + | chr4_4:4386134-4386153 | None:intergenic | 30.0% | |
ACTGTTCCAATTATCTTTCT+TGG | - | chr4_4:4386439-4386458 | Msa0665080:intron | 30.0% | |
TCTTGACCAAGAAAGATAAT+TGG | + | chr4_4:4386448-4386467 | None:intergenic | 30.0% | |
! | AACACGTTCGTTTTCATTTA+TGG | - | chr4_4:4386495-4386514 | Msa0665080:intron | 30.0% |
AACACGATTGTTTGAGAAAT+TGG | + | chr4_4:4386618-4386637 | None:intergenic | 30.0% | |
! | TTCTCAAACAATCGTGTTTT+TGG | - | chr4_4:4386620-4386639 | Msa0665080:CDS | 30.0% |
TTGTATTCATGTTGCTAATC+TGG | - | chr4_4:4386695-4386714 | Msa0665080:intron | 30.0% | |
TGTATTCATGTTGCTAATCT+GGG | - | chr4_4:4386696-4386715 | Msa0665080:intron | 30.0% | |
GATTGCTTTACTAAGATATG+AGG | - | chr4_4:4386775-4386794 | Msa0665080:intron | 30.0% | |
TTACTAAGATATGAGGACTT+TGG | - | chr4_4:4386782-4386801 | Msa0665080:intron | 30.0% | |
TACTAAGATATGAGGACTTT+GGG | - | chr4_4:4386783-4386802 | Msa0665080:intron | 30.0% | |
!!! | AAGTTTTTTGTGAGGAAGAT+CGG | + | chr4_4:4387000-4387019 | None:intergenic | 30.0% |
!!! | TTTGATGGAAGTTTTTTGTG+AGG | + | chr4_4:4387008-4387027 | None:intergenic | 30.0% |
ATCAAGAATTTGGGGATTTA+GGG | + | chr4_4:4387031-4387050 | None:intergenic | 30.0% | |
TTTCTCAGATCAAGAATTTG+GGG | + | chr4_4:4387039-4387058 | None:intergenic | 30.0% | |
GATTTCTCAGATCAAGAATT+TGG | + | chr4_4:4387041-4387060 | None:intergenic | 30.0% | |
GAAATCAATCTTGATCAAGA+TGG | - | chr4_4:4387055-4387074 | Msa0665080:intron | 30.0% | |
AACAAGCTTGAATTGAACAT+CGG | + | chr4_4:4385628-4385647 | None:intergenic | 30.0% | |
TTAGTGTATGTTTGGTTATG+GGG | - | chr4_4:4387383-4387402 | Msa0665080:CDS | 30.0% | |
CTCAAAAGAAAAAGGACATA+AGG | + | chr4_4:4387636-4387655 | None:intergenic | 30.0% | |
!! | CTTTTGAGTACATATCTAAC+TGG | - | chr4_4:4387648-4387667 | Msa0665080:intron | 30.0% |
TCTAACAAGCAGCTAAAAAT+TGG | + | chr4_4:4387878-4387897 | None:intergenic | 30.0% | |
! | TCTAATTTGCAGCTAACAAT+TGG | - | chr4_4:4387944-4387963 | Msa0665080:intron | 30.0% |
!!! | TTGATTCTAGGACTGATTTT+TGG | - | chr4_4:4387972-4387991 | Msa0665080:intron | 30.0% |
!! | TGTTCTAACTCACTTTTACT+CGG | - | chr4_4:4387995-4388014 | Msa0665080:intron | 30.0% |
!!! | CGATACCAATTTTTAGTATG+TGG | - | chr4_4:4388030-4388049 | Msa0665080:intron | 30.0% |
TGTCACCACATACTAAAAAT+TGG | + | chr4_4:4388038-4388057 | None:intergenic | 30.0% | |
GATTCTGACTAAAATTGAGT+TGG | - | chr4_4:4388078-4388097 | Msa0665080:intron | 30.0% | |
!! | GAGGTGAAGTGATTTATTTT+TGG | - | chr4_4:4388100-4388119 | Msa0665080:intron | 30.0% |
TCTAACTTGAAGCTAAACAT+TGG | + | chr4_4:4388194-4388213 | None:intergenic | 30.0% | |
!! | AAATTGGAGCTTTTGATTCT+AGG | - | chr4_4:4388327-4388346 | Msa0665080:intron | 30.0% |
! | AAAGTGAGTTGAATGTAAAG+TGG | - | chr4_4:4388443-4388462 | Msa0665080:intron | 30.0% |
! | GTTGATTCTAACTTAAAGTC+AGG | + | chr4_4:4388552-4388571 | None:intergenic | 30.0% |
! | CTTTAAGTTAGAATCAACTC+TGG | - | chr4_4:4388554-4388573 | Msa0665080:intron | 30.0% |
! | TCTAGAATCAATTCTCTAGA+GGG | - | chr4_4:4388635-4388654 | Msa0665080:intron | 30.0% |
ACAATTTCAGGAACCAAATT+TGG | + | chr4_4:4388885-4388904 | None:intergenic | 30.0% | |
ACTATGTACTTTGATCTATG+AGG | - | chr4_4:4389180-4389199 | Msa0665080:intron | 30.0% | |
TTGAATGGGCATCTAATTTA+TGG | + | chr4_4:4389756-4389775 | None:intergenic | 30.0% | |
CTTTAACAACTGGAATTGAA+TGG | + | chr4_4:4389771-4389790 | None:intergenic | 30.0% | |
TGTACTTCTTCCAAATTCAA+AGG | + | chr4_4:4389868-4389887 | None:intergenic | 30.0% | |
!!! | ACACTAGCTTTTCCTTTTTT+GGG | + | chr4_4:4390114-4390133 | None:intergenic | 30.0% |
!!! | AACACTAGCTTTTCCTTTTT+TGG | + | chr4_4:4390115-4390134 | None:intergenic | 30.0% |
TCATTTGATGCAAATGATAC+TGG | - | chr4_4:4390213-4390232 | Msa0665080:intron | 30.0% | |
! | TTTTGAATGATTTCAGGATC+TGG | - | chr4_4:4390408-4390427 | Msa0665080:intron | 30.0% |
TTTGAATGATTTCAGGATCT+GGG | - | chr4_4:4390409-4390428 | Msa0665080:intron | 30.0% | |
! | TGCATATTTTGTACAAGTAG+TGG | + | chr4_4:4390439-4390458 | None:intergenic | 30.0% |
TTTATCATCAAAAGAAAGGC+TGG | - | chr4_4:4390460-4390479 | Msa0665080:intron | 30.0% | |
AAGATTACCTTCCATAGAAA+GGG | + | chr4_4:4390566-4390585 | None:intergenic | 30.0% | |
GTAAACTCAAAATCTTCAAC+TGG | - | chr4_4:4390623-4390642 | Msa0665080:intron | 30.0% | |
TAGATTTCGAAACTATCAGA+CGG | - | chr4_4:4390838-4390857 | Msa0665080:intron | 30.0% | |
ATTGTCTTTCCGAAATGAAT+CGG | + | chr4_4:4390885-4390904 | None:intergenic | 30.0% | |
ATTTACTACTCTAGATACAG+CGG | + | chr4_4:4391324-4391343 | None:intergenic | 30.0% | |
TACAATTTCAGAGTGCAAAT+TGG | + | chr4_4:4391349-4391368 | None:intergenic | 30.0% | |
!! | AATTTGCACTCTGAAATTGT+AGG | - | chr4_4:4391348-4391367 | Msa0665080:intron | 30.0% |
TTGCCTATTCACAAATTTCA+GGG | + | chr4_4:4391390-4391409 | None:intergenic | 30.0% | |
TTTGCCTATTCACAAATTTC+AGG | + | chr4_4:4391391-4391410 | None:intergenic | 30.0% | |
! | AAAAAAGACCCGATTTTGAA+TGG | - | chr4_4:4391408-4391427 | Msa0665080:intron | 30.0% |
AGTCCATACAAGTTAACAAA+AGG | + | chr4_4:4391450-4391469 | None:intergenic | 30.0% | |
TTGCCTATTTGCAAATTTCA+AGG | - | chr4_4:4391501-4391520 | Msa0665080:intron | 30.0% | |
! | GACAAAAAAAGACCTGATTT+TGG | + | chr4_4:4391534-4391553 | None:intergenic | 30.0% |
!! | TTTTAAGAAGGGGTTCATTT+CGG | - | chr4_4:4391660-4391679 | Msa0665080:intron | 30.0% |
CATGTACAGTTGTTAGAAAT+TGG | - | chr4_4:4391722-4391741 | Msa0665080:intron | 30.0% | |
!!! | ATGTGGATTTTTTCCTGAAA+AGG | + | chr4_4:4391801-4391820 | None:intergenic | 30.0% |
! | TCAGGAAAAAATCCACATTT+TGG | - | chr4_4:4391803-4391822 | Msa0665080:intron | 30.0% |
!!! | AATCCACATTTTGGTTTTCT+AGG | - | chr4_4:4391812-4391831 | Msa0665080:intron | 30.0% |
!!! | ATCCACATTTTGGTTTTCTA+GGG | - | chr4_4:4391813-4391832 | Msa0665080:intron | 30.0% |
!!! | ATGACATTTTGGGCTTTATT+TGG | - | chr4_4:4391840-4391859 | Msa0665080:intron | 30.0% |
!!! | TGACATTTTGGGCTTTATTT+GGG | - | chr4_4:4391841-4391860 | Msa0665080:intron | 30.0% |
ATTGAAAAGGCTAGAACATT+TGG | + | chr4_4:4391964-4391983 | None:intergenic | 30.0% | |
!!! | AATCCACAGGGTTTTTTAAT+TGG | + | chr4_4:4392040-4392059 | None:intergenic | 30.0% |
AATTAAAAAACCCTGTGGAT+TGG | - | chr4_4:4392039-4392058 | Msa0665080:intron | 30.0% | |
AGAAATCCAAATAGATCCTT+GGG | + | chr4_4:4392170-4392189 | None:intergenic | 30.0% | |
!!! | TTTTCTTTATTTTTGCGGTG+AGG | - | chr4_4:4392214-4392233 | Msa0665080:intron | 30.0% |
!!! | TTTCTTTATTTTTGCGGTGA+GGG | - | chr4_4:4392215-4392234 | Msa0665080:intron | 30.0% |
!! | ACAACATAATGATGGACTAT+GGG | + | chr4_4:4392247-4392266 | None:intergenic | 30.0% |
TTGTATGGACAACATAATGA+TGG | + | chr4_4:4392255-4392274 | None:intergenic | 30.0% | |
CATATAGCTGCAAAGTAATA+GGG | + | chr4_4:4392334-4392353 | None:intergenic | 30.0% | |
TGAAAGATATTAGAGACTAC+TGG | + | chr4_4:4392546-4392565 | None:intergenic | 30.0% | |
ATGACAAAGATAACAAGATC+TGG | + | chr4_4:4392587-4392606 | None:intergenic | 30.0% | |
! | AGATCTTGTTATCTTTGTCA+TGG | - | chr4_4:4392586-4392605 | Msa0665080:CDS | 30.0% |
AACACTCTGTTTAAATGCTT+GGG | + | chr4_4:4392645-4392664 | None:intergenic | 30.0% | |
TGTACATGATTGAAAAAGGT+GGG | + | chr4_4:4393102-4393121 | None:intergenic | 30.0% | |
ATGTACATGATTGAAAAAGG+TGG | + | chr4_4:4393103-4393122 | None:intergenic | 30.0% | |
CGACTGGAGATTAATATAAA+GGG | + | chr4_4:4393141-4393160 | None:intergenic | 30.0% | |
CCTTTATATTAATCTCCAGT+CGG | - | chr4_4:4393139-4393158 | Msa0665080:intron | 30.0% | |
!! | AAAGTATTTTTCCACCAAGT+GGG | + | chr4_4:4393397-4393416 | None:intergenic | 30.0% |
AATTAAAGGTTAGCATGTGA+AGG | + | chr4_4:4393738-4393757 | None:intergenic | 30.0% | |
TGAAACACGATAGCAATTAA+AGG | + | chr4_4:4393752-4393771 | None:intergenic | 30.0% | |
AAGATATGGAGCAAAATGAA+AGG | - | chr4_4:4393892-4393911 | Msa0665080:intron | 30.0% | |
AGATATGGAGCAAAATGAAA+GGG | - | chr4_4:4393893-4393912 | Msa0665080:intron | 30.0% | |
AAGTAATCAGAAACAAACCT+CGG | + | chr4_4:4394130-4394149 | None:intergenic | 30.0% | |
GTAATCTATGCAGTTTGAAT+TGG | - | chr4_4:4394186-4394205 | Msa0665080:intron | 30.0% | |
CTGATTCACAACAAATACTT+TGG | + | chr4_4:4394357-4394376 | None:intergenic | 30.0% | |
!! | GGAAGTTTTGTGATGAAGAT+CGG | + | chr4_4:4385430-4385449 | None:intergenic | 35.0% |
! | ATTTGGGATTTAGGGTTTGA+TGG | + | chr4_4:4385451-4385470 | None:intergenic | 35.0% |
! | AATCTTGATGATCTTGTTGC+TGG | - | chr4_4:4385681-4385700 | Msa0665080:three_prime_UTR | 35.0% |
!! | GATGAAAAAGCGTTACTTGT+CGG | + | chr4_4:4385728-4385747 | None:intergenic | 35.0% |
TAATTGCGTGTTTGGTTATG+CGG | - | chr4_4:4385800-4385819 | Msa0665080:CDS | 35.0% | |
CCTAAAACCCAAACCAAATA+GGG | + | chr4_4:4385932-4385951 | None:intergenic | 35.0% | |
ACCTAAAACCCAAACCAAAT+AGG | + | chr4_4:4385933-4385952 | None:intergenic | 35.0% | |
!!! | TTTGGTTTGGGTTTTAGGTT+TGG | - | chr4_4:4385934-4385953 | Msa0665080:CDS | 35.0% |
AAGAACACAAAGAGATGAAG+GGG | + | chr4_4:4385990-4386009 | None:intergenic | 35.0% | |
GAAAGAACACAAAGAGATGA+AGG | + | chr4_4:4385992-4386011 | None:intergenic | 35.0% | |
AGATCAATACAATGAGCTCT+TGG | - | chr4_4:4386465-4386484 | Msa0665080:intron | 35.0% | |
AATGAAAACGAACGTGTTCT+TGG | + | chr4_4:4386493-4386512 | None:intergenic | 35.0% | |
! | TTGATTTAAATAGAGGTGCG+TGG | - | chr4_4:4386541-4386560 | Msa0665080:CDS | 35.0% |
! | TGATTTAAATAGAGGTGCGT+GGG | - | chr4_4:4386542-4386561 | Msa0665080:CDS | 35.0% |
ACGATTGTTTGAGAAATTGG+AGG | + | chr4_4:4386615-4386634 | None:intergenic | 35.0% | |
! | AAGGTCTTGTCATACATCAA+TGG | + | chr4_4:4386652-4386671 | None:intergenic | 35.0% |
TGATGTATGACAAGACCTTA+AGG | - | chr4_4:4386653-4386672 | Msa0665080:intron | 35.0% | |
TATGACAAGACCTTAAGGAA+AGG | - | chr4_4:4386658-4386677 | Msa0665080:intron | 35.0% | |
GATCAAGAATTTGGGGATTT+AGG | + | chr4_4:4387032-4387051 | None:intergenic | 35.0% | |
!! | ACCTTCAACTCACTTTTAGT+CGG | + | chr4_4:4387457-4387476 | None:intergenic | 35.0% |
AAGGTAAAGTGATCTATGCT+CGG | - | chr4_4:4387472-4387491 | Msa0665080:CDS | 35.0% | |
AAAAAGGACATAAGGAGAGA+GGG | + | chr4_4:4387628-4387647 | None:intergenic | 35.0% | |
TTAATGTGGGTTTGATTCTG+TGG | - | chr4_4:4387698-4387717 | Msa0665080:intron | 35.0% | |
! | CTGGCTTAAAAGTGTGTTTA+AGG | - | chr4_4:4387765-4387784 | Msa0665080:intron | 35.0% |
!! | CAATTGGAGCTTTTGATTCT+AGG | - | chr4_4:4387960-4387979 | Msa0665080:intron | 35.0% |
!! | TCTGACTAAAATTGAGTTGG+AGG | - | chr4_4:4388081-4388100 | Msa0665080:intron | 35.0% |
!!! | TGCACCTCTAGAATCAATTT+TGG | + | chr4_4:4388230-4388249 | None:intergenic | 35.0% |
TCACAACAGAATCAAACACA+CGG | + | chr4_4:4388389-4388408 | None:intergenic | 35.0% | |
TAAGTTAGAATCAACTCTGG+AGG | - | chr4_4:4388557-4388576 | Msa0665080:intron | 35.0% | |
GGATGTTCTCTGGTATAATT+TGG | + | chr4_4:4388588-4388607 | None:intergenic | 35.0% | |
! | CTCTAGAGAATTGATTCTAG+AGG | + | chr4_4:4388636-4388655 | None:intergenic | 35.0% |
!! | CTCTAGAATCAATTCTCTAG+AGG | - | chr4_4:4388634-4388653 | Msa0665080:intron | 35.0% |
! | CTAGAATCAATTCTCTAGAG+GGG | - | chr4_4:4388636-4388655 | Msa0665080:intron | 35.0% |
!!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4_4:4388732-4388751 | None:intergenic | 35.0% |
TCTTGTGTAAAAACAGGGTA+AGG | - | chr4_4:4388731-4388750 | Msa0665080:intron | 35.0% | |
TCTAAAAAAAAAGGGCAACC+CGG | + | chr4_4:4388823-4388842 | None:intergenic | 35.0% | |
TTGGTTCCTGAAATTGTAGA+TGG | - | chr4_4:4388888-4388907 | Msa0665080:intron | 35.0% | |
! | TATTCTGCATTAGAGGCTTT+TGG | - | chr4_4:4389096-4389115 | Msa0665080:intron | 35.0% |
GCACATGTATAAGTGTTCAA+GGG | + | chr4_4:4389443-4389462 | None:intergenic | 35.0% | |
AGCACATGTATAAGTGTTCA+AGG | + | chr4_4:4389444-4389463 | None:intergenic | 35.0% | |
GCTTGGTAAAAAGTTTATCC+AGG | + | chr4_4:4389531-4389550 | None:intergenic | 35.0% | |
! | CAACTTTTCTTTCAAAGGCT+TGG | + | chr4_4:4389548-4389567 | None:intergenic | 35.0% |
!!! | GCTCTCAAACTTTTTTCAAC+AGG | - | chr4_4:4389634-4389653 | Msa0665080:intron | 35.0% |
! | TTTGGAAGAAGTACAAGTCT+AGG | - | chr4_4:4389873-4389892 | Msa0665080:intron | 35.0% |
CTTAGAATTTAGAAGAGGCT+TGG | - | chr4_4:4389909-4389928 | Msa0665080:intron | 35.0% | |
! | GCATTTTGTCAAGCAATATG+TGG | - | chr4_4:4390300-4390319 | Msa0665080:intron | 35.0% |
GTGGCTTTCCTTACAATTAT+TGG | - | chr4_4:4390319-4390338 | Msa0665080:intron | 35.0% | |
! | AATGCATTGTCACTTACTGA+TGG | - | chr4_4:4390372-4390391 | Msa0665080:intron | 35.0% |
ATAGAAAGGGATCTTAGCTT+TGG | + | chr4_4:4390553-4390572 | None:intergenic | 35.0% | |
AAAGCTAAGATCCCTTTCTA+TGG | - | chr4_4:4390552-4390571 | Msa0665080:intron | 35.0% | |
CAAGATTACCTTCCATAGAA+AGG | + | chr4_4:4390567-4390586 | None:intergenic | 35.0% | |
CTTTCTATGGAAGGTAATCT+TGG | - | chr4_4:4390565-4390584 | Msa0665080:intron | 35.0% | |
!!! | TTTACCCTTTTTCTGAAGTG+TGG | - | chr4_4:4390650-4390669 | Msa0665080:intron | 35.0% |
!!! | TTACCCTTTTTCTGAAGTGT+GGG | - | chr4_4:4390651-4390670 | Msa0665080:intron | 35.0% |
!!! | GGCTTTTGATAATGAAGTCA+AGG | - | chr4_4:4390744-4390763 | Msa0665080:intron | 35.0% |
GAAGTCAAGGTTATAGATGT+TGG | - | chr4_4:4390757-4390776 | Msa0665080:intron | 35.0% | |
ACGGATAATATTCCATGAGA+AGG | - | chr4_4:4390857-4390876 | Msa0665080:intron | 35.0% | |
CGGATAATATTCCATGAGAA+GGG | - | chr4_4:4390858-4390877 | Msa0665080:intron | 35.0% | |
GGATAATATTCCATGAGAAG+GGG | - | chr4_4:4390859-4390878 | Msa0665080:intron | 35.0% | |
AGTTGAATCTGAGTTCAAGA+TGG | - | chr4_4:4391074-4391093 | Msa0665080:intron | 35.0% | |
TGAGTTCAAGATGGTTAGAT+TGG | - | chr4_4:4391083-4391102 | Msa0665080:intron | 35.0% | |
TTTACTACTCTAGATACAGC+GGG | + | chr4_4:4391323-4391342 | None:intergenic | 35.0% | |
!! | CACTCTGAAATTGTAGGTAT+CGG | - | chr4_4:4391354-4391373 | Msa0665080:intron | 35.0% |
!! | ACTCTGAAATTGTAGGTATC+GGG | - | chr4_4:4391355-4391374 | Msa0665080:intron | 35.0% |
TACCCCTGAAATTTGTGAAT+AGG | - | chr4_4:4391384-4391403 | Msa0665080:intron | 35.0% | |
TGCCTATTCACAAATTTCAG+GGG | + | chr4_4:4391389-4391408 | None:intergenic | 35.0% | |
!!! | GGTCCTTTTGTTAACTTGTA+TGG | - | chr4_4:4391444-4391463 | Msa0665080:intron | 35.0% |
!! | ACTTGTATGGACTAGTTTGA+CGG | - | chr4_4:4391457-4391476 | Msa0665080:intron | 35.0% |
CCACCTTGAAATTTGCAAAT+AGG | + | chr4_4:4391507-4391526 | None:intergenic | 35.0% | |
CCTATTTGCAAATTTCAAGG+TGG | - | chr4_4:4391504-4391523 | Msa0665080:intron | 35.0% | |
! | TCTAGGGAGTAATGACATTT+TGG | - | chr4_4:4391829-4391848 | Msa0665080:intron | 35.0% |
! | CTAGGGAGTAATGACATTTT+GGG | - | chr4_4:4391830-4391849 | Msa0665080:intron | 35.0% |
! | TTTTAACATTGCCGAGTTCA+AGG | - | chr4_4:4391914-4391933 | Msa0665080:intron | 35.0% |
AAAAGGCTAGAACATTTGGT+AGG | + | chr4_4:4391960-4391979 | None:intergenic | 35.0% | |
ATAAAAGGGCAAGAAGACTA+AGG | - | chr4_4:4392004-4392023 | Msa0665080:intron | 35.0% | |
TAGCCAATTAAAAAACCCTG+TGG | - | chr4_4:4392034-4392053 | Msa0665080:intron | 35.0% | |
TAATCTATCACCAATCCACA+GGG | + | chr4_4:4392052-4392071 | None:intergenic | 35.0% | |
TTAATCTATCACCAATCCAC+AGG | + | chr4_4:4392053-4392072 | None:intergenic | 35.0% | |
CTTTATCCCAAGGATCTATT+TGG | - | chr4_4:4392161-4392180 | Msa0665080:intron | 35.0% | |
GAGAAATCCAAATAGATCCT+TGG | + | chr4_4:4392171-4392190 | None:intergenic | 35.0% | |
!!! | TTCTTTATTTTTGCGGTGAG+GGG | - | chr4_4:4392216-4392235 | Msa0665080:intron | 35.0% |
!! | GACAACATAATGATGGACTA+TGG | + | chr4_4:4392248-4392267 | None:intergenic | 35.0% |
TAGAGAAGCAAAGAGTTGTA+TGG | + | chr4_4:4392270-4392289 | None:intergenic | 35.0% | |
CCATATAGCTGCAAAGTAAT+AGG | + | chr4_4:4392335-4392354 | None:intergenic | 35.0% | |
CCTATTACTTTGCAGCTATA+TGG | - | chr4_4:4392332-4392351 | Msa0665080:intron | 35.0% | |
TAATTGTTGATACTAGTGGG+CGG | - | chr4_4:4392421-4392440 | Msa0665080:intron | 35.0% | |
!!! | TATTAGAGACTACTGGCTTT+TGG | + | chr4_4:4392539-4392558 | None:intergenic | 35.0% |
! | AGATCTGGTTTCTGAATCAA+CGG | + | chr4_4:4392572-4392591 | None:intergenic | 35.0% |
TTTGTCATGGATAGCAGTAT+TGG | - | chr4_4:4392599-4392618 | Msa0665080:CDS | 35.0% | |
CAACACTCTGTTTAAATGCT+TGG | + | chr4_4:4392646-4392665 | None:intergenic | 35.0% | |
!! | TTTAAACAGAGTGTTGCAGT+TGG | - | chr4_4:4392650-4392669 | Msa0665080:CDS | 35.0% |
TCCAGTTCCAATGAATATGA+CGG | + | chr4_4:4392915-4392934 | None:intergenic | 35.0% | |
! | GTCTATTAGGTGTGTACTTT+TGG | - | chr4_4:4392984-4393003 | Msa0665080:intron | 35.0% |
CATATCCTAAAACCAATGTC+GGG | + | chr4_4:4393017-4393036 | None:intergenic | 35.0% | |
GCATATCCTAAAACCAATGT+CGG | + | chr4_4:4393018-4393037 | None:intergenic | 35.0% | |
TATACATGCTTGAAAAGGTG+AGG | + | chr4_4:4393040-4393059 | None:intergenic | 35.0% | |
!!! | TTTGGTTTTTGTCCCAACAT+TGG | - | chr4_4:4393064-4393083 | Msa0665080:intron | 35.0% |
!!! | TTTGTCCCAACATTGGTTTT+AGG | - | chr4_4:4393071-4393090 | Msa0665080:intron | 35.0% |
CGTATCCTAAAACCAATGTT+GGG | + | chr4_4:4393079-4393098 | None:intergenic | 35.0% | |
CCGACTGGAGATTAATATAA+AGG | + | chr4_4:4393142-4393161 | None:intergenic | 35.0% | |
! | TTAATCTCCAGTCGGTATTT+TGG | - | chr4_4:4393147-4393166 | Msa0665080:intron | 35.0% |
AATCCATGAAGTTGTTCCAA+TGG | - | chr4_4:4393206-4393225 | Msa0665080:intron | 35.0% | |
GTACATAATCCTCAAGGTAA+AGG | + | chr4_4:4393271-4393290 | None:intergenic | 35.0% | |
! | AAGTATTTTTCCACCAAGTG+GGG | + | chr4_4:4393396-4393415 | None:intergenic | 35.0% |
!! | CAAAGTATTTTTCCACCAAG+TGG | + | chr4_4:4393398-4393417 | None:intergenic | 35.0% |
! | CACTTGGTGGAAAAATACTT+TGG | - | chr4_4:4393396-4393415 | Msa0665080:intron | 35.0% |
TTGGTGGAAAAATACTTTGG+TGG | - | chr4_4:4393399-4393418 | Msa0665080:intron | 35.0% | |
TCTCATTTGATGCACTAAAC+TGG | - | chr4_4:4393438-4393457 | Msa0665080:intron | 35.0% | |
ATTTGATGCACTAAACTGGA+TGG | - | chr4_4:4393442-4393461 | Msa0665080:intron | 35.0% | |
! | GCTACTCTCTGATTTTCTTT+GGG | - | chr4_4:4393479-4393498 | Msa0665080:intron | 35.0% |
! | CTACTCTCTGATTTTCTTTG+GGG | - | chr4_4:4393480-4393499 | Msa0665080:intron | 35.0% |
! | TACTCTCTGATTTTCTTTGG+GGG | - | chr4_4:4393481-4393500 | Msa0665080:intron | 35.0% |
! | TTCTTTGGGGGACTAATTAA+TGG | - | chr4_4:4393493-4393512 | Msa0665080:intron | 35.0% |
!!! | TAGGTTTTTTCTATGCTACC+AGG | - | chr4_4:4393526-4393545 | Msa0665080:intron | 35.0% |
! | TTTTCTATGCTACCAGGATT+TGG | - | chr4_4:4393532-4393551 | Msa0665080:intron | 35.0% |
! | TGCCTTTTGGTACTAATTCA+TGG | + | chr4_4:4393558-4393577 | None:intergenic | 35.0% |
TGAATTAGTACCAAAAGGCA+AGG | - | chr4_4:4393558-4393577 | Msa0665080:intron | 35.0% | |
! | TGTAACGCTTAATTTTTGCC+TGG | + | chr4_4:4393594-4393613 | None:intergenic | 35.0% |
TAAGCGTTACATGACAATGA+TGG | - | chr4_4:4393603-4393622 | Msa0665080:intron | 35.0% | |
ATGGACTCAATGACAAATGA+AGG | - | chr4_4:4393622-4393641 | Msa0665080:intron | 35.0% | |
AGGGCTTAAAATACCAAAGA+AGG | - | chr4_4:4393912-4393931 | Msa0665080:intron | 35.0% | |
GGGCTTAAAATACCAAAGAA+GGG | - | chr4_4:4393913-4393932 | Msa0665080:intron | 35.0% | |
GACATTCATGTTTCGAGATA+AGG | + | chr4_4:4393950-4393969 | None:intergenic | 35.0% | |
CTAAAGCAAATTGGAGGAAT+GGG | - | chr4_4:4394003-4394022 | Msa0665080:intron | 35.0% | |
ACAAAGCTTGATGAAATCGA+TGG | - | chr4_4:4394032-4394051 | Msa0665080:intron | 35.0% | |
CAAAGCTTGATGAAATCGAT+GGG | - | chr4_4:4394033-4394052 | Msa0665080:intron | 35.0% | |
GAAATCGATGGGATCTAATA+AGG | - | chr4_4:4394044-4394063 | Msa0665080:intron | 35.0% | |
GGATCTAATAAGGACATGAT+GGG | - | chr4_4:4394054-4394073 | Msa0665080:intron | 35.0% | |
CTGCCAAGGTAATTAACTAA+TGG | + | chr4_4:4394258-4394277 | None:intergenic | 35.0% | |
AAGAGTTTCTTCGATGCGAA+TGG | + | chr4_4:4385403-4385422 | None:intergenic | 40.0% | |
! | AGCGAGTTGAATGTAACGAA+TGG | - | chr4_4:4385879-4385898 | Msa0665080:CDS | 40.0% |
!!! | CCCTATTTGGTTTGGGTTTT+AGG | - | chr4_4:4385929-4385948 | Msa0665080:CDS | 40.0% |
ATTGCAACAAGATTCACTCG+TGG | + | chr4_4:4386234-4386253 | None:intergenic | 40.0% | |
!! | CTTTTGAGGACCTTTCCTTA+AGG | + | chr4_4:4386671-4386690 | None:intergenic | 40.0% |
! | TTTGGGGATTTAGGGTTTGA+TGG | + | chr4_4:4387023-4387042 | None:intergenic | 40.0% |
! | AATCTTGATGATCTTGCTGC+TGG | - | chr4_4:4387254-4387273 | Msa0665080:intron | 40.0% |
!! | GAGGAAAAAGCGTTACTTGT+TGG | + | chr4_4:4387301-4387320 | None:intergenic | 40.0% |
! | TCCGACTAAAAGTGAGTTGA+AGG | - | chr4_4:4387453-4387472 | Msa0665080:CDS | 40.0% |
GAAAAAGGACATAAGGAGAG+AGG | + | chr4_4:4387629-4387648 | None:intergenic | 40.0% | |
! | GGAGCCAAAATTGATTCTAG+AGG | - | chr4_4:4388223-4388242 | Msa0665080:intron | 40.0% |
!! | GACATGTTTTGGATGTTCTC+TGG | + | chr4_4:4388598-4388617 | None:intergenic | 40.0% |
ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4_4:4388725-4388744 | Msa0665080:intron | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | - | chr4_4:4388726-4388745 | Msa0665080:intron | 40.0% | |
CGTACTATACACCAAATGGT+GGG | - | chr4_4:4388757-4388776 | Msa0665080:intron | 40.0% | |
!! | TACAATTTCAGGCACCGAAT+TGG | - | chr4_4:4389038-4389057 | Msa0665080:intron | 40.0% |
!! | ACAATTTCAGGCACCGAATT+GGG | - | chr4_4:4389039-4389058 | Msa0665080:intron | 40.0% |
AAAAGAGTGAACCCCCAATT+CGG | + | chr4_4:4389055-4389074 | None:intergenic | 40.0% | |
GTACTTTGATCTATGAGGCA+TGG | - | chr4_4:4389185-4389204 | Msa0665080:intron | 40.0% | |
TGTAAGCTGTATTCGCAACA+TGG | - | chr4_4:4389355-4389374 | Msa0665080:CDS | 40.0% | |
GTAAGCTGTATTCGCAACAT+GGG | - | chr4_4:4389356-4389375 | Msa0665080:CDS | 40.0% | |
GACATGTCATACTCTACCTT+TGG | - | chr4_4:4389412-4389431 | Msa0665080:intron | 40.0% | |
GTTTATCCAGGCGAACTTTA+AGG | + | chr4_4:4389519-4389538 | None:intergenic | 40.0% | |
AGCATTCGTAAGCAAAAGAG+AGG | + | chr4_4:4389817-4389836 | None:intergenic | 40.0% | |
!! | GTCATGTTCGTTGGTTTACA+AGG | - | chr4_4:4390135-4390154 | Msa0665080:intron | 40.0% |
CTAAGATCCCTTTCTATGGA+AGG | - | chr4_4:4390556-4390575 | Msa0665080:intron | 40.0% | |
CTTCCCACACTTCAGAAAAA+GGG | + | chr4_4:4390657-4390676 | None:intergenic | 40.0% | |
ACTTCCCACACTTCAGAAAA+AGG | + | chr4_4:4390658-4390677 | None:intergenic | 40.0% | |
AAGTGTGGGAAGTGAAATGA+TGG | - | chr4_4:4390665-4390684 | Msa0665080:intron | 40.0% | |
! | GAGTTAGTCAACTCCTTTTC+AGG | - | chr4_4:4390998-4391017 | Msa0665080:intron | 40.0% |
CAAGGTGGTAATCCAAAATC+AGG | - | chr4_4:4391519-4391538 | Msa0665080:intron | 40.0% | |
AATTCATCCCCTGAAGTTGT+AGG | + | chr4_4:4391590-4391609 | None:intergenic | 40.0% | |
TACAACTTCAGGGGATGAAT+TGG | - | chr4_4:4391589-4391608 | Msa0665080:intron | 40.0% | |
ACAACTTCAGGGGATGAATT+GGG | - | chr4_4:4391590-4391609 | Msa0665080:intron | 40.0% | |
ACAACTGTACATGCTTCTTC+TGG | + | chr4_4:4391715-4391734 | None:intergenic | 40.0% | |
! | GAGTTAGTCAACTCCTTTTC+AGG | - | chr4_4:4390998-4391017 | Msa0665080:intron | 40.0% |
CTCCCTAGAAAACCAAAATG+TGG | + | chr4_4:4391031-4391050 | None:intergenic | 40.0% | |
! | TTTGGGATAATGAATCACCG+TGG | - | chr4_4:4391858-4391877 | Msa0665080:intron | 40.0% |
CCAAATATAGGCCTTGAACT+CGG | + | chr4_4:4391928-4391947 | None:intergenic | 40.0% | |
GGCAAGAAGACTAAGGAAAT+TGG | - | chr4_4:4392011-4392030 | Msa0665080:intron | 40.0% | |
AGATCCTGTGAAAATTGCTG+TGG | - | chr4_4:4392359-4392378 | Msa0665080:intron | 40.0% | |
TGAAGAAATGCGCCAAGTTT+CGG | - | chr4_4:4392467-4392486 | Msa0665080:intron | 40.0% | |
!! | TGGCTTTTGGAAACAGACAT+TGG | + | chr4_4:4392526-4392545 | None:intergenic | 40.0% |
AAAAATGGATGGCCATGCAA+AGG | - | chr4_4:4392688-4392707 | Msa0665080:CDS | 40.0% | |
AAAATGGATGGCCATGCAAA+GGG | - | chr4_4:4392689-4392708 | Msa0665080:CDS | 40.0% | |
AAGAGTCCCGTCATATTCAT+TGG | - | chr4_4:4392905-4392924 | Msa0665080:intron | 40.0% | |
CCAGTTCCAATGAATATGAC+GGG | + | chr4_4:4392914-4392933 | None:intergenic | 40.0% | |
CCTAATAGACGACTGACAAA+TGG | + | chr4_4:4392974-4392993 | None:intergenic | 40.0% | |
CCATTTGTCAGTCGTCTATT+AGG | - | chr4_4:4392971-4392990 | Msa0665080:intron | 40.0% | |
GCGTATCCTAAAACCAATGT+TGG | + | chr4_4:4393080-4393099 | None:intergenic | 40.0% | |
GATCCATTGGAACAACTTCA+TGG | + | chr4_4:4393212-4393231 | None:intergenic | 40.0% | |
TGCAGCTTATTAAGCAGTTC+AGG | + | chr4_4:4393240-4393259 | None:intergenic | 40.0% | |
CTGCTTAATAAGCTGCAAGA+AGG | - | chr4_4:4393243-4393262 | Msa0665080:intron | 40.0% | |
AAGAAGGAACCTTTACCTTG+AGG | - | chr4_4:4393259-4393278 | Msa0665080:intron | 40.0% | |
ATTTACATTTGACCCCCACT+TGG | - | chr4_4:4393380-4393399 | Msa0665080:intron | 40.0% | |
! | AGTATTTTTCCACCAAGTGG+GGG | + | chr4_4:4393395-4393414 | None:intergenic | 40.0% |
! | GGCTACTCTCTGATTTTCTT+TGG | - | chr4_4:4393478-4393497 | Msa0665080:intron | 40.0% |
ACTAATTCATGGCCAAATCC+TGG | + | chr4_4:4393547-4393566 | None:intergenic | 40.0% | |
GGCCATGAATTAGTACCAAA+AGG | - | chr4_4:4393553-4393572 | Msa0665080:intron | 40.0% | |
TTGCTATCGTGTTTCAGAGT+TGG | - | chr4_4:4393756-4393775 | Msa0665080:intron | 40.0% | |
GTGACTCATTCATGAGCTTT+GGG | + | chr4_4:4393792-4393811 | None:intergenic | 40.0% | |
CAAAGCTCATGAATGAGTCA+CGG | - | chr4_4:4393791-4393810 | Msa0665080:intron | 40.0% | |
TCGACAAGTTAGGGAAGTAA+TGG | - | chr4_4:4393840-4393859 | Msa0665080:intron | 40.0% | |
! | TAGGGAAGTAATGGAGATGA+TGG | - | chr4_4:4393849-4393868 | Msa0665080:intron | 40.0% |
GAACTCATTTCTCCCTTCTT+TGG | + | chr4_4:4393928-4393947 | None:intergenic | 40.0% | |
TTTGCTTTAGCATCTGTGGA+GGG | + | chr4_4:4393993-4394012 | None:intergenic | 40.0% | |
ATTTGCTTTAGCATCTGTGG+AGG | + | chr4_4:4393994-4394013 | None:intergenic | 40.0% | |
! | CCAATTTGCTTTAGCATCTG+TGG | + | chr4_4:4393997-4394016 | None:intergenic | 40.0% |
CCACAGATGCTAAAGCAAAT+TGG | - | chr4_4:4393994-4394013 | Msa0665080:intron | 40.0% | |
CAGATGCTAAAGCAAATTGG+AGG | - | chr4_4:4393997-4394016 | Msa0665080:intron | 40.0% | |
GCTAAAGCAAATTGGAGGAA+TGG | - | chr4_4:4394002-4394021 | Msa0665080:intron | 40.0% | |
GGGATCTAATAAGGACATGA+TGG | - | chr4_4:4394053-4394072 | Msa0665080:intron | 40.0% | |
! | AAGGACATGATGGGAATGTT+TGG | - | chr4_4:4394063-4394082 | Msa0665080:intron | 40.0% |
GAACTCTTATGAAGCACAAG+AGG | + | chr4_4:4394153-4394172 | None:intergenic | 40.0% | |
GGGCCATTAGTTAATTACCT+TGG | - | chr4_4:4394252-4394271 | Msa0665080:intron | 40.0% | |
TAAATCGAACTTCTCTCCAC+AGG | - | chr4_4:4394414-4394433 | Msa0665080:intron | 40.0% | |
AAGATGGTGCTCGCAGATTT+AGG | - | chr4_4:4385498-4385517 | Msa0665080:three_prime_UTR | 45.0% | |
! | ACATTTTACCTCACCCAGAC+CGG | - | chr4_4:4385902-4385921 | Msa0665080:CDS | 45.0% |
! | CCAAACCAAATAGGGTACTC+CGG | + | chr4_4:4385924-4385943 | None:intergenic | 45.0% |
! | CGGAGTACCCTATTTGGTTT+GGG | - | chr4_4:4385922-4385941 | Msa0665080:CDS | 45.0% |
GCAGAGATGGAACCTTCATT+AGG | + | chr4_4:4386400-4386419 | None:intergenic | 45.0% | |
AAGATGGTGCTCGCAGATTT+AGG | - | chr4_4:4385498-4385517 | Msa0665080:three_prime_UTR | 45.0% | |
! | ATTCTCTAGAGGGGTAACCT+TGG | - | chr4_4:4388645-4388664 | Msa0665080:intron | 45.0% |
GTTGTTGTCATGTGACCGTA+AGG | - | chr4_4:4388681-4388700 | Msa0665080:intron | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4_4:4388721-4388740 | None:intergenic | 45.0% |
GCTGCGTACTATACACCAAA+TGG | - | chr4_4:4388753-4388772 | Msa0665080:intron | 45.0% | |
GCGTACTATACACCAAATGG+TGG | - | chr4_4:4388756-4388775 | Msa0665080:intron | 45.0% | |
!! | CAATTTCAGGCACCGAATTG+GGG | - | chr4_4:4389040-4389059 | Msa0665080:intron | 45.0% |
!! | AATTTCAGGCACCGAATTGG+GGG | - | chr4_4:4389041-4389060 | Msa0665080:intron | 45.0% |
ATGCATCCTTAAAGTTCGCC+TGG | - | chr4_4:4389510-4389529 | Msa0665080:intron | 45.0% | |
!! | CGTTGCCGTGTTTTTGTTAG+TGG | - | chr4_4:4389938-4389957 | Msa0665080:intron | 45.0% |
!!! | CCTTTTTTGGGAGTGAAAGC+AGG | + | chr4_4:4390102-4390121 | None:intergenic | 45.0% |
CCTGCTTTCACTCCCAAAAA+AGG | - | chr4_4:4390099-4390118 | Msa0665080:intron | 45.0% | |
GCTAGTGTTGTCATGTTCGT+TGG | - | chr4_4:4390126-4390145 | Msa0665080:intron | 45.0% | |
GTATCTGCACATACTAGAGC+TGG | + | chr4_4:4390489-4390508 | None:intergenic | 45.0% | |
TGTGCAGATACATTCAGAGC+TGG | - | chr4_4:4390498-4390517 | Msa0665080:intron | 45.0% | |
TGTGGGAAGTGAAATGATGG+AGG | - | chr4_4:4390668-4390687 | Msa0665080:intron | 45.0% | |
CAACTTCAGGGGATGAATTG+GGG | - | chr4_4:4391591-4391610 | Msa0665080:intron | 45.0% | |
TAATGAATCACCGTGGACAG+TGG | - | chr4_4:4391865-4391884 | Msa0665080:intron | 45.0% | |
CCGAGTTCAAGGCCTATATT+TGG | - | chr4_4:4391925-4391944 | Msa0665080:intron | 45.0% | |
AGGAGGGGGAAACCAAATAT+AGG | + | chr4_4:4391940-4391959 | None:intergenic | 45.0% | |
CTAGAACATTTGGTAGGAGG+GGG | + | chr4_4:4391954-4391973 | None:intergenic | 45.0% | |
GCTAGAACATTTGGTAGGAG+GGG | + | chr4_4:4391955-4391974 | None:intergenic | 45.0% | |
GGCTAGAACATTTGGTAGGA+GGG | + | chr4_4:4391956-4391975 | None:intergenic | 45.0% | |
AGGCTAGAACATTTGGTAGG+AGG | + | chr4_4:4391957-4391976 | None:intergenic | 45.0% | |
!!! | TTTATTTTTGCGGTGAGGGG+AGG | - | chr4_4:4392219-4392238 | Msa0665080:intron | 45.0% |
! | CCTTCCACAGCAATTTTCAC+AGG | + | chr4_4:4392366-4392385 | None:intergenic | 45.0% |
CCTGTGAAAATTGCTGTGGA+AGG | - | chr4_4:4392363-4392382 | Msa0665080:intron | 45.0% | |
GAAAATTGCTGTGGAAGGTG+TGG | - | chr4_4:4392368-4392387 | Msa0665080:intron | 45.0% | |
ATACCGTTGCTTCCGAAACT+TGG | + | chr4_4:4392482-4392501 | None:intergenic | 45.0% | |
!! | CATGGATAGCAGTATTGGTC+AGG | - | chr4_4:4392604-4392623 | Msa0665080:CDS | 45.0% |
TATCACGACACAGCAAACAC+AGG | + | chr4_4:4392809-4392828 | None:intergenic | 45.0% | |
CCCGTCATATTCATTGGAAC+TGG | - | chr4_4:4392911-4392930 | Msa0665080:intron | 45.0% | |
CATTGGAACTGGAGAACACA+TGG | - | chr4_4:4392922-4392941 | Msa0665080:intron | 45.0% | |
! | TTTGGTTTCTGTCCCGACAT+TGG | - | chr4_4:4393002-4393021 | Msa0665080:intron | 45.0% |
!!! | TCTGTCCCGACATTGGTTTT+AGG | - | chr4_4:4393009-4393028 | Msa0665080:intron | 45.0% |
!! | TCCAGTCGGTATTTTGGATC+AGG | - | chr4_4:4393153-4393172 | Msa0665080:intron | 45.0% |
AGTTCAGGCTGTTGATCCAT+TGG | + | chr4_4:4393225-4393244 | None:intergenic | 45.0% | |
CTGCTCGTACATAATCCTCA+AGG | + | chr4_4:4393277-4393296 | None:intergenic | 45.0% | |
ACTGGATGGCTGTGTATTGA+AGG | - | chr4_4:4393456-4393475 | Msa0665080:intron | 45.0% | |
CTGGATGGCTGTGTATTGAA+GGG | - | chr4_4:4393457-4393476 | Msa0665080:intron | 45.0% | |
AGTACCAAAAGGCAAGGATC+AGG | - | chr4_4:4393564-4393583 | Msa0665080:intron | 45.0% | |
CGTGACTCATTCATGAGCTT+TGG | + | chr4_4:4393793-4393812 | None:intergenic | 45.0% | |
! | AGGTTCTGGTCGACAAGTTA+GGG | - | chr4_4:4393831-4393850 | Msa0665080:intron | 45.0% |
ACAAGCGTCTCGCAAAGATA+TGG | - | chr4_4:4393878-4393897 | Msa0665080:intron | 45.0% | |
AAGCAAATTGGAGGAATGGG+TGG | - | chr4_4:4394006-4394025 | Msa0665080:intron | 45.0% | |
AGCAAATTGGAGGAATGGGT+GGG | - | chr4_4:4394007-4394026 | Msa0665080:intron | 45.0% | |
! | GACATGATGGGAATGTTTGG+CGG | - | chr4_4:4394066-4394085 | Msa0665080:intron | 45.0% |
TCTGACCGCAGAAATCTCAA+TGG | - | chr4_4:4394231-4394250 | Msa0665080:intron | 45.0% | |
CTGACCGCAGAAATCTCAAT+GGG | - | chr4_4:4394232-4394251 | Msa0665080:intron | 45.0% | |
ATGGCCCATTGAGATTTCTG+CGG | + | chr4_4:4394239-4394258 | None:intergenic | 45.0% | |
TGAGTATGAACCTTCTCCTG+TGG | + | chr4_4:4394433-4394452 | None:intergenic | 45.0% | |
!!! | GATTTTATTTTATTTTTTTA+GGG | + | chr4_4:4386845-4386864 | None:intergenic | 5.0% |
!!! | AGATTTTATTTTATTTTTTT+AGG | + | chr4_4:4386846-4386865 | None:intergenic | 5.0% |
!!! | TTCAATTTTTTTATTTAATT+TGG | - | chr4_4:4387325-4387344 | Msa0665080:intron | 5.0% |
!! | AAATTATATTAAACATAATA+GGG | + | chr4_4:4393343-4393362 | None:intergenic | 5.0% |
!! | TAAATTATATTAAACATAAT+AGG | + | chr4_4:4393344-4393363 | None:intergenic | 5.0% |
!!! | TTTTTATTTTTTGTATTATT+TGG | - | chr4_4:4393670-4393689 | Msa0665080:intron | 5.0% |
!!! | TTTTATTTTTTGTATTATTT+GGG | - | chr4_4:4393671-4393690 | Msa0665080:intron | 5.0% |
ATGGTGCTCGCAGATTTAGG+AGG | - | chr4_4:4385501-4385520 | Msa0665080:three_prime_UTR | 50.0% | |
TGGTGCTCGCAGATTTAGGA+GGG | - | chr4_4:4385502-4385521 | Msa0665080:three_prime_UTR | 50.0% | |
! | CAAATAGGGTACTCCGGTCT+GGG | + | chr4_4:4385918-4385937 | None:intergenic | 50.0% |
! | CCGGAGTACCCTATTTGGTT+TGG | - | chr4_4:4385921-4385940 | Msa0665080:CDS | 50.0% |
! | ATGAAGGGGTGTACGTAGGT+CGG | + | chr4_4:4385976-4385995 | None:intergenic | 50.0% |
! | AGAGATGAAGGGGTGTACGT+AGG | + | chr4_4:4385980-4385999 | None:intergenic | 50.0% |
GCAACAAGATTCACTCGTGG+TGG | + | chr4_4:4386231-4386250 | None:intergenic | 50.0% | |
GAGGTGCAATTCAGCAGAGA+TGG | + | chr4_4:4386413-4386432 | None:intergenic | 50.0% | |
ATGGTGCTCGCAGATTTAGG+AGG | - | chr4_4:4385501-4385520 | Msa0665080:three_prime_UTR | 50.0% | |
TGGTGCTCGCAGATTTAGGA+GGG | - | chr4_4:4385502-4385521 | Msa0665080:three_prime_UTR | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | + | chr4_4:4388665-4388684 | None:intergenic | 50.0% | |
GTCATGTGACCGTAAGGTCA+CGG | - | chr4_4:4388687-4388706 | Msa0665080:intron | 50.0% | |
TCATGTGACCGTAAGGTCAC+GGG | - | chr4_4:4388688-4388707 | Msa0665080:intron | 50.0% | |
GACTTGAACCCGTGACCTTA+CGG | + | chr4_4:4388699-4388718 | None:intergenic | 50.0% | |
AGCTGTATTCGCAACATGGG+AGG | - | chr4_4:4389359-4389378 | Msa0665080:CDS | 50.0% | |
GTGTTCAAGGGAGCTTCCAA+AGG | + | chr4_4:4389431-4389450 | None:intergenic | 50.0% | |
AATGAATCGGCCCCTTCTCA+TGG | + | chr4_4:4390872-4390891 | None:intergenic | 50.0% | |
! | GAGAAGGGGCCGATTCATTT+CGG | - | chr4_4:4390873-4390892 | Msa0665080:intron | 50.0% |
! | GACCCGATTTTGAATGGCGA+CGG | - | chr4_4:4391414-4391433 | Msa0665080:intron | 50.0% |
! | ACCCGATTTTGAATGGCGAC+GGG | - | chr4_4:4391415-4391434 | Msa0665080:intron | 50.0% |
TGCCCGTCGCCATTCAAAAT+CGG | + | chr4_4:4391420-4391439 | None:intergenic | 50.0% | |
!!! | TGGTCAGGCTGCTTTTGATC+AGG | - | chr4_4:4392619-4392638 | Msa0665080:CDS | 50.0% |
GCCTGATCCAAAATACCGAC+TGG | + | chr4_4:4393157-4393176 | None:intergenic | 50.0% | |
!! | TCGGTATTTTGGATCAGGCC+AGG | - | chr4_4:4393158-4393177 | Msa0665080:intron | 50.0% |
!! | CGGTATTTTGGATCAGGCCA+GGG | - | chr4_4:4393159-4393178 | Msa0665080:intron | 50.0% |
TACATTTGACCCCCACTTGG+TGG | - | chr4_4:4393383-4393402 | Msa0665080:intron | 50.0% | |
! | CTGTCCTGATCCTTGCCTTT+TGG | + | chr4_4:4393571-4393590 | None:intergenic | 50.0% |
ATGCGTATAGCTCGAGGTTC+TGG | - | chr4_4:4393817-4393836 | Msa0665080:intron | 50.0% | |
! | GAGGTTCTGGTCGACAAGTT+AGG | - | chr4_4:4393830-4393849 | Msa0665080:intron | 50.0% |
! | GAGGGAGGATTTTGCTCATG+TGG | + | chr4_4:4393975-4393994 | None:intergenic | 50.0% |
! | ATGATGGGAATGTTTGGCGG+CGG | - | chr4_4:4394069-4394088 | Msa0665080:intron | 50.0% |
GGCGAGCAGTAGGTTCTTAA+TGG | - | chr4_4:4394093-4394112 | Msa0665080:intron | 50.0% | |
GAACTTCTCTCCACAGGAGA+AGG | - | chr4_4:4394420-4394439 | Msa0665080:intron | 50.0% | |
! | CCAAATAGGGTACTCCGGTC+TGG | + | chr4_4:4385919-4385938 | None:intergenic | 55.0% |
! | CCAGACCGGAGTACCCTATT+TGG | - | chr4_4:4385916-4385935 | Msa0665080:CDS | 55.0% |
! | GGGTGTACGTAGGTCGGTTT+GGG | + | chr4_4:4385970-4385989 | None:intergenic | 55.0% |
AAGGTCACGGGTTCAAGTCC+TGG | - | chr4_4:4388700-4388719 | Msa0665080:intron | 55.0% | |
CTGAAGCTCCCGCATATGCA+GGG | + | chr4_4:4388796-4388815 | None:intergenic | 55.0% | |
ACTGAAGCTCCCGCATATGC+AGG | + | chr4_4:4388797-4388816 | None:intergenic | 55.0% | |
GGAGTGAAAGCAGGCTTTCC+AGG | + | chr4_4:4390093-4390112 | None:intergenic | 55.0% | |
GCCCGTCGCCATTCAAAATC+GGG | + | chr4_4:4391419-4391438 | None:intergenic | 55.0% | |
TTGAATGGCGACGGGCAGTT+TGG | - | chr4_4:4391423-4391442 | Msa0665080:intron | 55.0% | |
TGTCCGACGCCTACAACTTC+AGG | - | chr4_4:4391578-4391597 | Msa0665080:intron | 55.0% | |
GTCCGACGCCTACAACTTCA+GGG | - | chr4_4:4391579-4391598 | Msa0665080:intron | 55.0% | |
TCCGACGCCTACAACTTCAG+GGG | - | chr4_4:4391580-4391599 | Msa0665080:intron | 55.0% | |
TCCCCTGAAGTTGTAGGCGT+CGG | + | chr4_4:4391584-4391603 | None:intergenic | 55.0% | |
CACAGTCTCACCACTGTCCA+CGG | + | chr4_4:4391878-4391897 | None:intergenic | 55.0% | |
GCGCCAAGTTTCGGAAGCAA+CGG | - | chr4_4:4392476-4392495 | Msa0665080:intron | 55.0% | |
ATGGATGGCCATGCAAAGGG+TGG | - | chr4_4:4392692-4392711 | Msa0665080:CDS | 55.0% | |
TGAACCCAGACAAGTCTCCC+TGG | + | chr4_4:4393179-4393198 | None:intergenic | 55.0% | |
TAAGATGGGTCCCATGAGCG+AGG | - | chr4_4:4393311-4393330 | Msa0665080:intron | 55.0% | |
AGGGGGTTAACCTCGCTCAT+GGG | + | chr4_4:4393324-4393343 | None:intergenic | 55.0% | |
TAGGGGGTTAACCTCGCTCA+TGG | + | chr4_4:4393325-4393344 | None:intergenic | 55.0% | |
CGGATGATGCGTATAGCTCG+AGG | - | chr4_4:4393811-4393830 | Msa0665080:intron | 55.0% | |
GCTTTAGCATCTGTGGAGGG+AGG | + | chr4_4:4393990-4394009 | None:intergenic | 55.0% | |
TAATGGCTTATGCGCTGCCG+AGG | - | chr4_4:4394110-4394129 | Msa0665080:intron | 55.0% | |
GGGGTGTACGTAGGTCGGTT+TGG | + | chr4_4:4385971-4385990 | None:intergenic | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | - | chr4_4:4388654-4388673 | Msa0665080:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4_4:4388769-4388788 | Msa0665080:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | + | chr4_4:4388784-4388803 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | + | chr4_4:4388785-4388804 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | - | chr4_4:4388784-4388803 | Msa0665080:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | - | chr4_4:4388785-4388804 | Msa0665080:intron | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4_4:4388801-4388820 | Msa0665080:intron | 60.0% | |
CGTGGACAGTGGTGAGACTG+TGG | - | chr4_4:4391876-4391895 | Msa0665080:intron | 60.0% | |
GATGGCCATGCAAAGGGTGG+TGG | - | chr4_4:4392695-4392714 | Msa0665080:CDS | 60.0% | |
TCAGGCCAGGGAGACTTGTC+TGG | - | chr4_4:4393171-4393190 | Msa0665080:intron | 60.0% | |
CAGGCCAGGGAGACTTGTCT+GGG | - | chr4_4:4393172-4393191 | Msa0665080:intron | 60.0% | |
AGGCAAGGATCAGGACAGCC+AGG | - | chr4_4:4393573-4393592 | Msa0665080:intron | 60.0% | |
ATGGGAATGTTTGGCGGCGG+TGG | - | chr4_4:4394072-4394091 | Msa0665080:intron | 60.0% | |
! | AGGGTACTCCGGTCTGGGTG+AGG | + | chr4_4:4385913-4385932 | None:intergenic | 65.0% |
CGGGAAGGGGTCCCACCATT+TGG | + | chr4_4:4388771-4388790 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | + | chr4_4:4388786-4388805 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | + | chr4_4:4388790-4388809 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | + | chr4_4:4388791-4388810 | None:intergenic | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | - | chr4_4:4388802-4388821 | Msa0665080:intron | 65.0% | |
GCGCACCACCACCCTTTGCA+TGG | + | chr4_4:4392703-4392722 | None:intergenic | 65.0% | |
TGGCGGCGGTGGCGAGCAGT+AGG | - | chr4_4:4394083-4394102 | Msa0665080:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 4385384 | 4394454 | 4385384 | ID=Msa0665080;Name=Msa0665080 |
chr4_4 | mRNA | 4385384 | 4394454 | 4385384 | ID=Msa0665080-mRNA-1;Parent=Msa0665080;Name=Msa0665080-mRNA-1;_AED=0.14;_eAED=0.14;_QI=119|1|1|1|0.88|0.8|10|350|496 |
chr4_4 | exon | 4385384 | 4386065 | 4385384 | ID=Msa0665080-mRNA-1:exon:1507;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4386195 | 4386309 | 4386195 | ID=Msa0665080-mRNA-1:exon:1506;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4386506 | 4386663 | 4386506 | ID=Msa0665080-mRNA-1:exon:1505;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4386846 | 4386946 | 4386846 | ID=Msa0665080-mRNA-1:exon:1504;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4387109 | 4387257 | 4387109 | ID=Msa0665080-mRNA-1:exon:1503;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4387341 | 4387491 | 4387341 | ID=Msa0665080-mRNA-1:exon:1502;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4389261 | 4389414 | 4389261 | ID=Msa0665080-mRNA-1:exon:1501;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4389682 | 4389781 | 4389682 | ID=Msa0665080-mRNA-1:exon:1500;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4392534 | 4392855 | 4392534 | ID=Msa0665080-mRNA-1:exon:1499;Parent=Msa0665080-mRNA-1 |
chr4_4 | exon | 4394427 | 4394454 | 4394427 | ID=Msa0665080-mRNA-1:exon:1498;Parent=Msa0665080-mRNA-1 |
chr4_4 | five_prime_UTR | 4394427 | 4394454 | 4394427 | ID=Msa0665080-mRNA-1:five_prime_utr;Parent=Msa0665080-mRNA-1 |
chr4_4 | five_prime_UTR | 4392765 | 4392855 | 4392765 | ID=Msa0665080-mRNA-1:five_prime_utr;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4392534 | 4392764 | 4392534 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4389682 | 4389781 | 4389682 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4389261 | 4389414 | 4389261 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4387341 | 4387491 | 4387341 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4387109 | 4387257 | 4387109 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4386846 | 4386946 | 4386846 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4386506 | 4386663 | 4386506 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4386195 | 4386309 | 4386195 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | CDS | 4385734 | 4386065 | 4385734 | ID=Msa0665080-mRNA-1:cds;Parent=Msa0665080-mRNA-1 |
chr4_4 | three_prime_UTR | 4385384 | 4385733 | 4385384 | ID=Msa0665080-mRNA-1:three_prime_utr;Parent=Msa0665080-mRNA-1 |
Gene Sequence |
Protein sequence |