AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0178820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178820 MtrunA17_Chr1g0208681 99.070 645 6 0 1 645 1 645 0.0 1313
Msa0178820 MtrunA17_Chr1g0208651 98.765 162 2 0 711 872 1 162 3.16e-112 340
Msa0178820 MtrunA17_Chr1g0208671 100.000 52 0 0 645 696 9 60 1.57e-28 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178820 AT1G15130.1 70.853 868 216 7 13 871 7 846 0.0 1169

Find 256 sgRNAs with CRISPR-Local

Find 524 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCGCTGTGTTGTTTAATT+TGG 0.218497 1_4:-66241293 Msa0178820:CDS
TATGGAGATGGAATGGTATA+AGG 0.221971 1_4:+66235143 None:intergenic
GTGTATTGGATCTTTGATTT+TGG 0.231432 1_4:+66235450 None:intergenic
TTATCGAAATGCTGACTTAA+AGG 0.246981 1_4:+66240395 None:intergenic
TGCTGATGGACCTGAGGGGC+TGG 0.257385 1_4:+66235278 None:intergenic
CCTTGGTGAGGTGGAGGATA+TGG 0.279392 1_4:+66235125 None:intergenic
ATGGCTGATAATAAGGATTC+TGG 0.286917 1_4:+66235411 None:intergenic
TGAATCTGCACTTCCAAGTT+TGG 0.288706 1_4:-66239389 Msa0178820:CDS
GATAGACTTAATAGGTTTGC+AGG 0.290355 1_4:-66239603 Msa0178820:CDS
TGCTCAGATGGCTGATAATA+AGG 0.292820 1_4:+66235404 None:intergenic
GAAGTCAATTCGGCACTAAA+TGG 0.293420 1_4:-66239665 Msa0178820:CDS
GGACCTGAGGGGCTGGGTAC+AGG 0.294975 1_4:+66235285 None:intergenic
AAGCTGCGCTGCAGCGCCCC+TGG 0.308663 1_4:+66240217 None:intergenic
TTGACATAGAGCTTTGAAAT+AGG 0.321500 1_4:+66241435 None:intergenic
ATTTGTTGGATAGACTTAAT+AGG 0.323559 1_4:-66239611 Msa0178820:CDS
TAGTTCATTGTCACCTCTTC+CGG 0.326092 1_4:-66240096 Msa0178820:CDS
TGATCAGGTTCAGATGAAAT+TGG 0.338621 1_4:+66241397 None:intergenic
CAGTTGATGTTGGCGGGATT+TGG 0.338652 1_4:+66235309 None:intergenic
TGATGCGATTAACAAGTTAG+AGG 0.344489 1_4:-66240192 Msa0178820:CDS
AGCAAAGTTTCGAGAAATAA+AGG 0.346589 1_4:-66235853 Msa0178820:CDS
GCTTAGGGAAATGGAATTGC+CGG 0.346856 1_4:-66239889 Msa0178820:CDS
GACGACTCTAGCAATATATA+TGG 0.347337 1_4:+66234734 None:intergenic
TTGCTGGTGGCTGCTGCTGA+TGG 0.358866 1_4:+66235264 None:intergenic
GCTGAAGCTTGTTATAGATA+TGG 0.364918 1_4:-66240329 Msa0178820:CDS
CCGGGTTAGGCTTAGGGAAA+TGG 0.370762 1_4:-66239898 Msa0178820:CDS
GAAGAAGTTTCTTTGTAAGA+AGG 0.373928 1_4:-66241784 Msa0178820:five_prime_UTR
AGCTAACCCGGGTTAGGCTT+AGG 0.381309 1_4:-66239905 Msa0178820:CDS
ATGGCGGCGGCCGGCTCGTT+CGG 0.385922 1_4:-66241193 Msa0178820:CDS
GGCAGCTTCAATCTGCTTGT+AGG 0.385967 1_4:+66235878 None:intergenic
CACTTTGACAAAGAATTTGT+TGG 0.388593 1_4:-66239625 Msa0178820:CDS
ATAATTGGCCTTGCCAAACT+TGG 0.392712 1_4:+66239376 None:intergenic
GAATATTATATTTATTCTAC+AGG 0.397236 1_4:+66235065 None:intergenic
GTTCTTGATTAACCCTCCTT+AGG 0.398192 1_4:+66239745 None:intergenic
ATCAGAGTTGCAGCAGCTTA+AGG 0.399905 1_4:-66239769 Msa0178820:CDS
GAGCTATGTCTTCAGAAATA+TGG 0.403948 1_4:+66236717 None:intergenic
ATGGAGATGGAATGGTATAA+GGG 0.404473 1_4:+66235144 None:intergenic
TGCCCTGTACCCAGCCCCTC+AGG 0.408025 1_4:-66235288 Msa0178820:CDS
AGTAGCTGGTCTGAGTTTCC+AGG 0.408042 1_4:-66235519 Msa0178820:CDS
GCTGATGGACCTGAGGGGCT+GGG 0.413002 1_4:+66235279 None:intergenic
CTCTAGGAGCTCAAAGGGCT+GGG 0.415214 1_4:-66238571 Msa0178820:CDS
CAAAATGAAGATGCTATTGT+AGG 0.417817 1_4:-66239343 Msa0178820:CDS
GTCAGCATTTCGATAAGTCT+TGG 0.418400 1_4:-66240388 Msa0178820:CDS
TATGGTCAACCTGCCTATCC+TGG 0.419966 1_4:-66235233 Msa0178820:CDS
TACCGTTGACGGCCGGCGGC+AGG 0.422690 1_4:-66241230 Msa0178820:CDS
GCGTTGGTTTGCATTGTCAT+TGG 0.425716 1_4:-66234917 Msa0178820:three_prime_UTR
CCACCAGCAAACCATGATTA+TGG 0.426694 1_4:-66235251 Msa0178820:CDS
TGAAATTGGAAATCGAGTTT+CGG 0.427429 1_4:+66241411 None:intergenic
ACGAGGATCTGTTTGTGTAT+TGG 0.427944 1_4:+66235436 None:intergenic
TGGAGGCTGTCCAGATCAGT+GGG 0.428193 1_4:-66239809 Msa0178820:CDS
TTAACGCACTCACCTTCGTT+TGG 0.433224 1_4:-66241372 Msa0178820:CDS
ACATCTTCTTTGAGATTTGT+CGG 0.433365 1_4:+66239831 None:intergenic
GCCGGATTCTATTCTTGCTC+TGG 0.435293 1_4:-66239871 Msa0178820:CDS
CTTCAATCATTTCCCTGCAC+TGG 0.439263 1_4:+66235555 None:intergenic
GCCGCTGTTTACAGTCAGAT+TGG 0.441959 1_4:-66241271 Msa0178820:CDS
GATGTTGGCGGGATTTGGTA+TGG 0.442768 1_4:+66235314 None:intergenic
CACTATCTCTTGAATAAATG+AGG 0.451091 1_4:-66235034 Msa0178820:three_prime_UTR
ACCTCTTCCGGCCTTTGCTA+TGG 0.453935 1_4:-66240084 Msa0178820:CDS
TGGCTGATAATAAGGATTCT+GGG 0.454236 1_4:+66235412 None:intergenic
GCTCAATTTAGAAGTCAATT+CGG 0.456856 1_4:-66239675 Msa0178820:CDS
TTTGAAAACACTATTGCTAA+AGG 0.457567 1_4:-66241049 Msa0178820:CDS
GGCCATCCTTGATGCCCGTC+CGG 0.459237 1_4:-66239511 Msa0178820:intron
GCTGCTGCTGATGGACCTGA+GGG 0.461280 1_4:+66235273 None:intergenic
GGCTGCTGCTGATGGACCTG+AGG 0.462399 1_4:+66235272 None:intergenic
TGCAGCAGCTTAAGGACCTA+AGG 0.466771 1_4:-66239761 Msa0178820:CDS
GTGAGTGCGTTAACGTGATC+AGG 0.468021 1_4:+66241382 None:intergenic
AGCAAGCTAGTGAGCTAACC+CGG 0.468456 1_4:-66239917 Msa0178820:CDS
ACAACTGTTGCTGCAAATCC+AGG 0.468549 1_4:-66236675 Msa0178820:intron
TCTCTCCAGGTACACTGAAA+TGG 0.469811 1_4:-66239976 Msa0178820:CDS
GACATCCACCGGTTCTTATG+AGG 0.473020 1_4:-66236771 Msa0178820:CDS
GTGTTTGTGCTAAGATCTCT+AGG 0.475009 1_4:-66241015 Msa0178820:CDS
GGATGAGCATATGAAGAAAC+TGG 0.475296 1_4:+66235377 None:intergenic
AGGTACACTGAAATGGTTGA+TGG 0.478284 1_4:-66239969 Msa0178820:CDS
CTAGTGAGCTAACCCGGGTT+AGG 0.478773 1_4:-66239911 Msa0178820:CDS
AAGAAGTTTCTTTGTAAGAA+GGG 0.479503 1_4:-66241783 Msa0178820:five_prime_UTR
GCTAACCCGGGTTAGGCTTA+GGG 0.479946 1_4:-66239904 Msa0178820:CDS
GACCTGAGGGGCTGGGTACA+GGG 0.480548 1_4:+66235286 None:intergenic
CAAAATATTCATCTTGAGAA+AGG 0.480906 1_4:-66241313 Msa0178820:CDS
ACTCTAGGAGCTCAAAGGGC+TGG 0.481847 1_4:-66238572 Msa0178820:CDS
CCATTTCCCTAAGCCTAACC+CGG 0.482160 1_4:+66239898 None:intergenic
ATAAAGGACAACATCAATGA+AGG 0.482564 1_4:-66235837 Msa0178820:CDS
ACAGGGCAGTTGATGTTGGC+GGG 0.482932 1_4:+66235303 None:intergenic
GTGGGTGCATTATTGTAGTA+TGG 0.484429 1_4:+66235200 None:intergenic
GAGGCTGTCCAGATCAGTGG+GGG 0.485272 1_4:-66239807 Msa0178820:CDS
GGACCAGGTTGTTGCTGTTG+TGG 0.486196 1_4:+66235173 None:intergenic
GGAGGAGATTGCGCGGTTGA+AGG 0.487146 1_4:-66240276 Msa0178820:CDS
AGAAACTCTAGGAGCTCAAA+GGG 0.487332 1_4:-66238576 Msa0178820:CDS
TGACCATAATCATGGTTTGC+TGG 0.488445 1_4:+66235248 None:intergenic
GAAACTGGTGGTTGCTCAGA+TGG 0.493158 1_4:+66235392 None:intergenic
GGCGGGATTTGGTATGGAGG+AGG 0.493396 1_4:+66235320 None:intergenic
GAGGGTTAATCAAGAACTAC+TGG 0.494601 1_4:-66239739 Msa0178820:CDS
GACCAGGTTGTTGCTGTTGT+GGG 0.495429 1_4:+66235174 None:intergenic
AATGGAAGGCGATGTAGTTA+CGG 0.496403 1_4:+66241575 None:intergenic
TACAGGGCAGTTGATGTTGG+CGG 0.499922 1_4:+66235302 None:intergenic
TCTCCTTGACAGCCCTGTCA+AGG 0.499984 1_4:+66240153 None:intergenic
TCACGTCGTGCGGGGAGAGA+TGG 0.500429 1_4:+66241469 None:intergenic
ATGGATCGGAGTGACGTTCA+AGG 0.500497 1_4:+66241488 None:intergenic
AAAATTCTATGTTACCCTGC+AGG 0.501341 1_4:-66235811 Msa0178820:intron
TCTGCAACAACTCCTCGGTC+TGG 0.501989 1_4:+66239715 None:intergenic
ACCGGTGGATGTCATCAACT+TGG 0.507976 1_4:+66236781 None:intergenic
CTTTGAAATAGGTTATGAAA+AGG 0.508463 1_4:+66241446 None:intergenic
TTCCTTCTGCAACAACTCCT+CGG 0.508593 1_4:+66239710 None:intergenic
ATCGGAATACCGTTGACGGC+CGG 0.508631 1_4:-66241237 Msa0178820:CDS
ATATTAACAGAAACCTTGAC+AGG 0.509972 1_4:-66240166 Msa0178820:CDS
GTGCTTCGCGTTCAGAGTAA+TGG 0.514270 1_4:+66241557 None:intergenic
ATAGGTTGGGCTGTATTATG+AGG 0.514559 1_4:-66240444 Msa0178820:intron
AGGCAGGTTGACCATAATCA+TGG 0.514946 1_4:+66235240 None:intergenic
ATGAAAAGGTCACGTCGTGC+GGG 0.516431 1_4:+66241460 None:intergenic
GAGGAGATTGCGCGGTTGAA+GGG 0.516689 1_4:-66240275 Msa0178820:CDS
TGTTGCTGTTGTGGGTGTGT+GGG 0.517354 1_4:+66235182 None:intergenic
TTAGCGAGGAAGTAAACTAA+TGG 0.517620 1_4:+66241810 None:intergenic
GGGTTTGAAGATCGTCTTCG+AGG 0.519135 1_4:+66241530 None:intergenic
TAGTATGGAGCACGCCATCC+AGG 0.521659 1_4:+66235215 None:intergenic
ACCATAGCAAAGGCCGGAAG+AGG 0.522018 1_4:+66240083 None:intergenic
AGAGCCTTGGCACTATTGTC+AGG 0.523748 1_4:+66239996 None:intergenic
GCTTCTATGAAAATCTCGGT+TGG 0.524244 1_4:-66241154 Msa0178820:CDS
ATCAACCATTTCAGTGTACC+TGG 0.525411 1_4:+66239971 None:intergenic
TTCTCAAGGTCTTGCCTGCA+GGG 0.525892 1_4:+66235797 None:intergenic
TTTGATCGGAATACCGTTGA+CGG 0.526382 1_4:-66241241 Msa0178820:CDS
AAACCTTGACAGGGCTGTCA+AGG 0.527257 1_4:-66240156 Msa0178820:CDS
TAGCATTCACCACCGAATCA+TGG 0.527651 1_4:-66241692 Msa0178820:exon
GATTTGTCCGTTGAGTGTGC+TGG 0.530150 1_4:-66241115 Msa0178820:CDS
TAGCCACCTTGGTGAGGTGG+AGG 0.530224 1_4:+66235119 None:intergenic
GTTGACTTGTACTTTGCGAA+GGG 0.530524 1_4:-66234847 Msa0178820:three_prime_UTR
TGACAAGGAACATCCAGTGC+AGG 0.530758 1_4:-66235568 Msa0178820:CDS
AACTCTGATTCCAAACCAGC+AGG 0.531825 1_4:+66239783 None:intergenic
GGGTACAGGGCAGTTGATGT+TGG 0.533504 1_4:+66235299 None:intergenic
TTGTTGCTGTTGTGGGTGTG+TGG 0.535545 1_4:+66235181 None:intergenic
ATTGCTAAAGGAAGTACTCC+TGG 0.536729 1_4:-66241037 Msa0178820:CDS
GCTTATGCTTGCTCAAGCTC+AGG 0.537236 1_4:-66241080 Msa0178820:CDS
GTATCATATTTAGGTTGCGT+TGG 0.540323 1_4:-66234933 Msa0178820:three_prime_UTR
TTGTGCTAAGATCTCTAGGC+AGG 0.540495 1_4:-66241011 Msa0178820:intron
TGGAGGATATGGAGATGGAA+TGG 0.542063 1_4:+66235136 None:intergenic
AGGGTCTCTCAAACAAAGCT+TGG 0.543950 1_4:-66239323 Msa0178820:intron
AAAATGAAGATGCTATTGTA+GGG 0.545526 1_4:-66239342 Msa0178820:CDS
ACTAGAGCTGCACGAGAAAG+AGG 0.545851 1_4:-66240306 Msa0178820:CDS
AGCCTGCCGCCGGCCGTCAA+CGG 0.547387 1_4:+66241228 None:intergenic
TCCAGAGCAAGAATAGAATC+CGG 0.548211 1_4:+66239870 None:intergenic
CCCAAGTTGATGACATCCAC+CGG 0.548404 1_4:-66236782 Msa0178820:CDS
AGGAAAACACTTTACCGGAC+GGG 0.548646 1_4:+66239497 None:intergenic
ATTAGTTTACTTCCTCGCTA+AGG 0.550188 1_4:-66241808 Msa0178820:five_prime_UTR
ATAGTGCCAAGGCTCTCTCC+AGG 0.550685 1_4:-66239989 Msa0178820:CDS
ATTGCGACGAGGCCATGATT+CGG 0.551235 1_4:+66241680 None:intergenic
AATGTGTGTCGACGTGGCAG+TGG 0.551944 1_4:+66241748 None:intergenic
GCACGCCATCCAGGATAGGC+AGG 0.552012 1_4:+66235224 None:intergenic
TAGTAGCCACCTTGGTGAGG+TGG 0.552279 1_4:+66235116 None:intergenic
GATGGTAATGAGTGAGGTGC+TGG 0.553139 1_4:-66240054 Msa0178820:CDS
TATTTCTCGAAACTTTGCTA+TGG 0.553406 1_4:+66235857 None:intergenic
AAGCATGAGAAGCCTGCCGC+CGG 0.554250 1_4:+66241218 None:intergenic
AATTCGGCACTAAATGGACT+AGG 0.554633 1_4:-66239659 Msa0178820:CDS
GTTGGTGTTGCCTACGGCGG+AGG 0.554650 1_4:+66241654 None:intergenic
AGTGTACCTGGAGAGAGCCT+TGG 0.555977 1_4:+66239983 None:intergenic
TTTATTCAAGAGATAGTGAT+CGG 0.556453 1_4:+66235039 None:intergenic
TATGAAAAGGTCACGTCGTG+CGG 0.557027 1_4:+66241459 None:intergenic
GACCGAGGAGTTGTTGCAGA+AGG 0.557406 1_4:-66239712 Msa0178820:CDS
ACTTTACCGGACGGGCATCA+AGG 0.558347 1_4:+66239505 None:intergenic
TAGAGAACATGCAGCACTGA+TGG 0.558480 1_4:-66239532 Msa0178820:CDS
AGATTGGTTTAACATTTGAT+CGG 0.560559 1_4:-66241255 Msa0178820:CDS
GGCTTCACCATAGCAAAGGC+CGG 0.563145 1_4:+66240077 None:intergenic
CACCCACAACAGCAACAACC+TGG 0.564229 1_4:-66235176 Msa0178820:CDS
TGATGTGAATGGCCATATGA+TGG 0.564451 1_4:+66235350 None:intergenic
TAGAAACTCTAGGAGCTCAA+AGG 0.564812 1_4:-66238577 Msa0178820:CDS
CAGAGGCAACTAGAAACTCT+AGG 0.565811 1_4:-66238587 Msa0178820:CDS
GTGGAGGCTGTCCAGATCAG+TGG 0.567088 1_4:-66239810 Msa0178820:CDS
TGGAGCACGCCATCCAGGAT+AGG 0.569832 1_4:+66235220 None:intergenic
AGAGGTGACAATGAACTAGC+AGG 0.570476 1_4:+66240101 None:intergenic
TGAGGTGGAGGATATGGAGA+TGG 0.570485 1_4:+66235131 None:intergenic
GTCAACCTGCCTATCCTGGA+TGG 0.571774 1_4:-66235229 Msa0178820:CDS
GATTCTATTCTTGCTCTGGA+AGG 0.571907 1_4:-66239867 Msa0178820:CDS
GACAAATCTCAAAGAAGATG+TGG 0.573340 1_4:-66239829 Msa0178820:CDS
GAATGCTTCTATGAAAATCT+CGG 0.574119 1_4:-66241158 Msa0178820:CDS
GCTGCTTATAGTAGCCACCT+TGG 0.576790 1_4:+66235108 None:intergenic
CTTTGCTATGGTGAAGCCGA+TGG 0.577714 1_4:-66240072 Msa0178820:CDS
GGGATTTGGTATGGAGGAGG+AGG 0.579071 1_4:+66235323 None:intergenic
GCTTAGAGAGATGAAAAGAA+AGG 0.580569 1_4:-66238537 Msa0178820:intron
TACCGGACGGGCATCAAGGA+TGG 0.581555 1_4:+66239509 None:intergenic
TAACAACAACTACCCTTCAG+TGG 0.581587 1_4:-66235477 Msa0178820:CDS
GACAAGGAACATCCAGTGCA+GGG 0.583077 1_4:-66235567 Msa0178820:CDS
TAATAAGGATTCTGGGGACG+AGG 0.583084 1_4:+66235419 None:intergenic
TCGCAATCTTCCTCCGCCGT+AGG 0.583198 1_4:-66241664 Msa0178820:CDS
AGCAGCTTAAGGACCTAAGG+AGG 0.584482 1_4:-66239758 Msa0178820:CDS
TGAAAAGGTCACGTCGTGCG+GGG 0.585586 1_4:+66241461 None:intergenic
TTATAGTAGCCACCTTGGTG+AGG 0.586278 1_4:+66235113 None:intergenic
TAAAGGACAACATCAATGAA+GGG 0.587672 1_4:-66235836 Msa0178820:CDS
CATGATGTTGGTGTTGCCTA+CGG 0.589786 1_4:+66241648 None:intergenic
TGTTGACTTGTACTTTGCGA+AGG 0.590897 1_4:-66234848 Msa0178820:three_prime_UTR
ATCGGAGTGACGTTCAAGGT+CGG 0.592674 1_4:+66241492 None:intergenic
AGGCTGTCCAGATCAGTGGG+GGG 0.593791 1_4:-66239806 Msa0178820:CDS
GTGAATGGCCATATGATGGA+GGG 0.593813 1_4:+66235354 None:intergenic
AACAACAACTACCCTTCAGT+GGG 0.597294 1_4:-66235476 Msa0178820:CDS
CTGCACTTCCAAGTTTGGCA+AGG 0.597452 1_4:-66239384 Msa0178820:CDS
CCGGTGGATGTCATCAACTT+GGG 0.599670 1_4:+66236782 None:intergenic
GCTGTATTATGAGGAAGCAT+TGG 0.603565 1_4:-66240435 Msa0178820:CDS
GGCTGATAATAAGGATTCTG+GGG 0.603808 1_4:+66235413 None:intergenic
AGCACCTCACTCATTACCAT+CGG 0.605520 1_4:+66240056 None:intergenic
TCGTGCGGGGAGAGATGGAT+CGG 0.605643 1_4:+66241474 None:intergenic
AGACATAGCTCAGAATATTG+AGG 0.606092 1_4:-66236705 Msa0178820:CDS
GTTGGCGGGATTTGGTATGG+AGG 0.606170 1_4:+66235317 None:intergenic
TGAATGGCCATATGATGGAG+GGG 0.612785 1_4:+66235355 None:intergenic
GATGTTCAGAGACAAGTAGC+TGG 0.613501 1_4:-66235533 Msa0178820:CDS
GAAGGCGATGTAGTTACGGA+GGG 0.614620 1_4:+66241579 None:intergenic
AACGGACAAATCAAGAGTGG+TGG 0.615367 1_4:+66241126 None:intergenic
TAACATTCCAGCACACTCAA+CGG 0.616027 1_4:+66241108 None:intergenic
TTTGTCAAAGTGCTTGACTG+AGG 0.616383 1_4:+66239636 None:intergenic
TCTAAGAAAACCGAACGAGC+CGG 0.616600 1_4:+66241183 None:intergenic
GAGATCTTAGCACAAACACC+AGG 0.617958 1_4:+66241019 None:intergenic
GAGGAGGCTGATGATGTGAA+TGG 0.618079 1_4:+66235339 None:intergenic
CCATAATCATGGTTTGCTGG+TGG 0.618594 1_4:+66235251 None:intergenic
GAAACTTCTTCACCTTAGCG+AGG 0.620558 1_4:+66241796 None:intergenic
TTGACTTGTACTTTGCGAAG+GGG 0.621044 1_4:-66234846 Msa0178820:three_prime_UTR
AAGATCCTCATAAGAACCGG+TGG 0.623391 1_4:+66236766 None:intergenic
TTCAATCTTGAAGATTACAA+AGG 0.623450 1_4:-66236171 Msa0178820:intron
GGAGGCTGTCCAGATCAGTG+GGG 0.626546 1_4:-66239808 Msa0178820:CDS
TGCTATTAGTGTGCTTACTG+AGG 0.629455 1_4:-66240252 Msa0178820:CDS
CATTTCCCTAAGCCTAACCC+GGG 0.630083 1_4:+66239899 None:intergenic
TGTTCCTGACAATAGTGCCA+AGG 0.630139 1_4:-66240000 Msa0178820:CDS
GGAGATGGAATGGTATAAGG+GGG 0.630359 1_4:+66235146 None:intergenic
TGGAGATGGAATGGTATAAG+GGG 0.631641 1_4:+66235145 None:intergenic
CGATGTAGTTACGGAGGGGA+CGG 0.632331 1_4:+66241584 None:intergenic
GGTGAATGCTAACGTGTGCG+TGG 0.634900 1_4:+66241704 None:intergenic
GAATGGCCATATGATGGAGG+GGG 0.635886 1_4:+66235356 None:intergenic
GAAGATTGCGAGCATGATGT+TGG 0.638744 1_4:+66241636 None:intergenic
GGAATACCGTTGACGGCCGG+CGG 0.639902 1_4:-66241234 Msa0178820:CDS
CATCGGCTTCACCATAGCAA+AGG 0.644385 1_4:+66240073 None:intergenic
TGTGAATGGCCATATGATGG+AGG 0.646322 1_4:+66235353 None:intergenic
AAGCTGCGGAGAGTGATGCT+AGG 0.647394 1_4:-66239569 Msa0178820:CDS
AAATCTCAAAGAAGATGTGG+AGG 0.649760 1_4:-66239826 Msa0178820:CDS
GGAAGGCGATGTAGTTACGG+AGG 0.651109 1_4:+66241578 None:intergenic
GCACGAGAAAGAGGAAATAG+CGG 0.652885 1_4:-66240297 Msa0178820:CDS
CGAGAAAGAGGAAATAGCGG+AGG 0.653083 1_4:-66240294 Msa0178820:CDS
GCGACGAGGCCATGATTCGG+TGG 0.654667 1_4:+66241683 None:intergenic
TTAAGACGAAGAGCTAGATG+TGG 0.656376 1_4:+66235006 None:intergenic
TGATGGCATTATAAGAACAC+AGG 0.662835 1_4:-66239952 Msa0178820:CDS
GAGGGGACGGTAGAGATCTA+CGG 0.666966 1_4:+66241597 None:intergenic
TTCGCGTTCAGAGTAATGGA+AGG 0.670586 1_4:+66241561 None:intergenic
GCAGCTTAAGGACCTAAGGA+GGG 0.673631 1_4:-66239757 Msa0178820:CDS
CTCAACGGACAAATCAAGAG+TGG 0.673842 1_4:+66241123 None:intergenic
GAGATGGAATGGTATAAGGG+GGG 0.678993 1_4:+66235147 None:intergenic
GCAATGACTTTGTAATGACA+AGG 0.681951 1_4:-66235583 Msa0178820:CDS
AGTGACGTTCAAGGTCGGAA+CGG 0.683747 1_4:+66241497 None:intergenic
CCATATCCTCCACCTCACCA+AGG 0.688432 1_4:-66235125 Msa0178820:CDS
GAAGGGAATGTGTGTCGACG+TGG 0.691605 1_4:+66241742 None:intergenic
TATTAACAGAAACCTTGACA+GGG 0.695940 1_4:-66240165 Msa0178820:CDS
CTGCTGCTGATGGACCTGAG+GGG 0.697684 1_4:+66235274 None:intergenic
AGGTAACTTGAAGCAAGCTG+CGG 0.698377 1_4:-66239583 Msa0178820:CDS
GCAAGCTAGTGAGCTAACCC+GGG 0.699373 1_4:-66239916 Msa0178820:CDS
AGAACTACTGGTCCAGACCG+AGG 0.703717 1_4:-66239727 Msa0178820:CDS
GATGTTGGTGTTGCCTACGG+CGG 0.708829 1_4:+66241651 None:intergenic
GAACGCATCAAACCAAACGA+AGG 0.708844 1_4:+66241360 None:intergenic
ACCAATCTGACTGTAAACAG+CGG 0.718921 1_4:+66241270 None:intergenic
TATCCTCCACCTCACCAAGG+TGG 0.719566 1_4:-66235122 Msa0178820:CDS
AAATAGCGGAGGAGATTGCG+CGG 0.726143 1_4:-66240283 Msa0178820:CDS
GGTGACAATGAACTAGCAGG+AGG 0.736115 1_4:+66240104 None:intergenic
GAAGCCGATGGTAATGAGTG+AGG 0.738917 1_4:-66240060 Msa0178820:CDS
AAGGCGATGTAGTTACGGAG+GGG 0.748040 1_4:+66241580 None:intergenic
GGCGGAGGAAGATTGCGACG+AGG 0.759095 1_4:+66241669 None:intergenic
TGAGCATATGAAGAAACTGG+TGG 0.763538 1_4:+66235380 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATAAATAATAAAAT+GGG + chr1_4:66240780-66240799 None:intergenic 0.0%
!! AAAAAATATAAATAATAAAA+TGG + chr1_4:66240781-66240800 None:intergenic 0.0%
!! ACATCTTATAACAAATTTAA+AGG + chr1_4:66237074-66237093 None:intergenic 15.0%
!!! TAAATTTGTTATAAGATGTT+TGG - chr1_4:66237075-66237094 Msa0178820:intron 15.0%
!! TAATAGATCTTACATTATAT+TGG - chr1_4:66237639-66237658 Msa0178820:intron 15.0%
!!! TCGAAAAGTATAATATAAAA+AGG + chr1_4:66237682-66237701 None:intergenic 15.0%
!!! TAATTTTGTTTTTCAACTTA+CGG - chr1_4:66238058-66238077 Msa0178820:intron 15.0%
!!! TATCTTTTTATTCTAGTTTT+AGG + chr1_4:66238865-66238884 None:intergenic 15.0%
!! AAACTAGAATAAAAAGATAA+AGG - chr1_4:66238866-66238885 Msa0178820:intron 15.0%
!!! TATTAGAAAATTAATTTGGT+AGG + chr1_4:66239171-66239190 None:intergenic 15.0%
!! CTCTTATTAGAAAATTAATT+TGG + chr1_4:66239175-66239194 None:intergenic 15.0%
!! TATTCATACTATGAAAATTT+GGG + chr1_4:66239231-66239250 None:intergenic 15.0%
!! ATATTCATACTATGAAAATT+TGG + chr1_4:66239232-66239251 None:intergenic 15.0%
!! TGAATATAAAATTTATTCTC+TGG - chr1_4:66239245-66239264 Msa0178820:intron 15.0%
!!! AGATTTAGTTTTCATTTTTT+GGG - chr1_4:66239968-66239987 Msa0178820:CDS 15.0%
!!! TAAATCTGTTTTTGTTTTTT+TGG - chr1_4:66240466-66240485 Msa0178820:intron 15.0%
!!! ATATTTTTAATTTTCAGTAG+TGG - chr1_4:66240540-66240559 Msa0178820:intron 15.0%
!! GAATATTATATTTATTCTAC+AGG + chr1_4:66241486-66241505 None:intergenic 15.0%
!!! GAATAATTTGAGTTTATCTA+AGG - chr1_4:66235667-66235686 Msa0178820:intron 20.0%
!!! TTTTGATCAAAAGACATAAT+TGG + chr1_4:66237190-66237209 None:intergenic 20.0%
!!! TATCTTGAAACACAATATTT+TGG - chr1_4:66237409-66237428 Msa0178820:intron 20.0%
!! ATTTAAGCAAAAATGTAATC+TGG - chr1_4:66237504-66237523 Msa0178820:intron 20.0%
!! TTTAAGCAAAAATGTAATCT+GGG - chr1_4:66237505-66237524 Msa0178820:intron 20.0%
!!! ATAAATTTGAGATGTGAAAT+TGG - chr1_4:66237823-66237842 Msa0178820:intron 20.0%
!! ATTATTTATGTTCAAAATGC+TGG - chr1_4:66238138-66238157 Msa0178820:intron 20.0%
!! TGATATTACTTTGATATCAT+TGG + chr1_4:66238178-66238197 None:intergenic 20.0%
!!! TTTCTTTATTGATGTTTTCA+AGG - chr1_4:66238254-66238273 Msa0178820:intron 20.0%
!!! TTCTTTATTGATGTTTTCAA+GGG - chr1_4:66238255-66238274 Msa0178820:intron 20.0%
!! CATACAAAATGTTAAAATAG+AGG + chr1_4:66238601-66238620 None:intergenic 20.0%
!! AAAAGATATAAATAGACAGT+TGG + chr1_4:66238771-66238790 None:intergenic 20.0%
!! TATAATTGTATGAATACTGA+TGG + chr1_4:66239132-66239151 None:intergenic 20.0%
!! ATATAAAATTTATTCTCTGG+TGG - chr1_4:66239248-66239267 Msa0178820:intron 20.0%
!! AATAAGGTAACAAAAATACA+AGG + chr1_4:66239557-66239576 None:intergenic 20.0%
!! CTAATTTATCTTGCAAAATA+AGG + chr1_4:66239573-66239592 None:intergenic 20.0%
!!! TATTTTGCAAGATAAATTAG+TGG - chr1_4:66239573-66239592 Msa0178820:CDS 20.0%
!!! ATTCTATTTTATCCATTTAG+AGG - chr1_4:66239601-66239620 Msa0178820:CDS 20.0%
!!! TTATGAGGATCTTTTTAAAA+AGG - chr1_4:66239792-66239811 Msa0178820:CDS 20.0%
!!! GAGATTTAGTTTTCATTTTT+TGG - chr1_4:66239967-66239986 Msa0178820:CDS 20.0%
!!! GATTTAGTTTTCATTTTTTG+GGG - chr1_4:66239969-66239988 Msa0178820:CDS 20.0%
!! TCTATCACATTCAATTAAAA+AGG + chr1_4:66240266-66240285 None:intergenic 20.0%
!!! TGTGAAAATCTTGTTTTTTT+GGG - chr1_4:66241570-66241589 Msa0178820:CDS 20.0%
!!! TTTTTTTGGGTATCATATTT+TGG - chr1_4:66241583-66241602 Msa0178820:CDS 20.0%
!!! GTATCATATTTTGGTTTTTT+GGG - chr1_4:66241592-66241611 Msa0178820:CDS 20.0%
!!! TATCATATTTTGGTTTTTTG+GGG - chr1_4:66241593-66241612 Msa0178820:CDS 20.0%
! AAGAAGTTTCTTTGTAAGAA+GGG - chr1_4:66234765-66234784 Msa0178820:three_prime_UTR 25.0%
!!! GGATTTTGTTTTGTTTTGAA+GGG + chr1_4:66234826-66234845 None:intergenic 25.0%
!!! TGGATTTTGTTTTGTTTTGA+AGG + chr1_4:66234827-66234846 None:intergenic 25.0%
!!! CTTTGAAATAGGTTATGAAA+AGG + chr1_4:66235105-66235124 None:intergenic 25.0%
! CAAAATATTCATCTTGAGAA+AGG - chr1_4:66235235-66235254 Msa0178820:CDS 25.0%
!!! AGATTGGTTTAACATTTGAT+CGG - chr1_4:66235293-66235312 Msa0178820:CDS 25.0%
! TTTGAAAACACTATTGCTAA+AGG - chr1_4:66235499-66235518 Msa0178820:CDS 25.0%
!! ATTTGTTGGATAGACTTAAT+AGG - chr1_4:66236937-66236956 Msa0178820:intron 25.0%
! TTTAAAGGAAAACACTTTAC+CGG + chr1_4:66237059-66237078 None:intergenic 25.0%
! AAAATGAAGATGCTATTGTA+GGG - chr1_4:66237206-66237225 Msa0178820:intron 25.0%
!! TTGTTATGTTTGGATTTTCA+AGG - chr1_4:66237270-66237289 Msa0178820:intron 25.0%
! ATTTATCCACTTATAAGATC+TGG - chr1_4:66237363-66237382 Msa0178820:intron 25.0%
!!! GAATATTTGTAGCTATTTTC+AGG - chr1_4:66237479-66237498 Msa0178820:intron 25.0%
!! ATCCTTTGCTATGTATATAA+CGG - chr1_4:66237711-66237730 Msa0178820:intron 25.0%
!! TTTTATGTTCATTGATACAG+AGG - chr1_4:66237944-66237963 Msa0178820:intron 25.0%
! TAGTCTATAGATCAAATTAG+AGG + chr1_4:66238213-66238232 None:intergenic 25.0%
! TTGGTATCACATGTTAAAAA+TGG + chr1_4:66238281-66238300 None:intergenic 25.0%
! TTGATTACACAAGTCAAAAT+AGG + chr1_4:66238377-66238396 None:intergenic 25.0%
! AGAGAAGAGATTGTTAAAAA+GGG + chr1_4:66238404-66238423 None:intergenic 25.0%
! AAGAGAAGAGATTGTTAAAA+AGG + chr1_4:66238405-66238424 None:intergenic 25.0%
!! ACAAATTTTCCTTTAAGTCA+AGG - chr1_4:66238502-66238521 Msa0178820:intron 25.0%
! ATAATGTATCCTTGACTTAA+AGG + chr1_4:66238514-66238533 None:intergenic 25.0%
! TTGAAATGGAGAAATATATC+AGG + chr1_4:66238546-66238565 None:intergenic 25.0%
! TTAAAACTAGTACAAGAACA+CGG + chr1_4:66238961-66238980 None:intergenic 25.0%
! TCCAAAAAAAAAATCTCAGT+AGG - chr1_4:66239081-66239100 Msa0178820:intron 25.0%
!!! ACCTACTGAGATTTTTTTTT+TGG + chr1_4:66239085-66239104 None:intergenic 25.0%
! ATACAATAGAAACCTCTAAA+TGG + chr1_4:66239616-66239635 None:intergenic 25.0%
! TTCATTATAACAAGCTACAT+AGG + chr1_4:66239685-66239704 None:intergenic 25.0%
!! ATGCTTTTGTAAATATCTTC+AGG - chr1_4:66239732-66239751 Msa0178820:CDS 25.0%
! AATAACCAATGTATGGAAAA+AGG + chr1_4:66239999-66240018 None:intergenic 25.0%
!!! ATTTATTTTGGCATTTGTCA+GGG + chr1_4:66240081-66240100 None:intergenic 25.0%
!!! TATTTATTTTGGCATTTGTC+AGG + chr1_4:66240082-66240101 None:intergenic 25.0%
!!! TTCTGCTAGAGTATTTATTT+TGG + chr1_4:66240093-66240112 None:intergenic 25.0%
! TTCAATCTTGAAGATTACAA+AGG - chr1_4:66240377-66240396 Msa0178820:CDS 25.0%
! AATCTTATAGAGAAGAACAA+CGG + chr1_4:66240410-66240429 None:intergenic 25.0%
!! TCTGATTTTTATACTTCATC+TGG - chr1_4:66240433-66240452 Msa0178820:CDS 25.0%
! TATACTTCATCTGGTTAAAA+AGG - chr1_4:66240442-66240461 Msa0178820:CDS 25.0%
! AACACATTCAAATAATACGA+GGG + chr1_4:66240847-66240866 None:intergenic 25.0%
! AAACACATTCAAATAATACG+AGG + chr1_4:66240848-66240867 None:intergenic 25.0%
! TCGTATTATTTGAATGTGTT+TGG - chr1_4:66240847-66240866 Msa0178820:intron 25.0%
! TGCAATTTCTTTGTTCAATT+AGG - chr1_4:66240915-66240934 Msa0178820:intron 25.0%
! TTTATTCAAGAGATAGTGAT+CGG + chr1_4:66241512-66241531 None:intergenic 25.0%
!! CAAAAAAACAAGATTTTCAC+AGG + chr1_4:66241571-66241590 None:intergenic 25.0%
!!! CTGTGAAAATCTTGTTTTTT+TGG - chr1_4:66241569-66241588 Msa0178820:CDS 25.0%
!!! GGTATCATATTTTGGTTTTT+TGG - chr1_4:66241591-66241610 Msa0178820:CDS 25.0%
!!! TTTTTTGGGGTATCATATTT+AGG - chr1_4:66241606-66241625 Msa0178820:CDS 25.0%
!! CTACATATTTTCCTTCTTTT+TGG - chr1_4:66241765-66241784 Msa0178820:five_prime_UTR 25.0%
! GTTTAAAAACTCCAAAAAGA+AGG + chr1_4:66241779-66241798 None:intergenic 25.0%
GAAGAAGTTTCTTTGTAAGA+AGG - chr1_4:66234764-66234783 Msa0178820:three_prime_UTR 30.0%
!! TTGACATAGAGCTTTGAAAT+AGG + chr1_4:66235116-66235135 None:intergenic 30.0%
TGAAATTGGAAATCGAGTTT+CGG + chr1_4:66235140-66235159 None:intergenic 30.0%
GAATGCTTCTATGAAAATCT+CGG - chr1_4:66235390-66235409 Msa0178820:CDS 30.0%
TGGGAATTCAATTCTCTAAT+TGG - chr1_4:66235562-66235581 Msa0178820:CDS 30.0%
GCTGTTGATATGTTTATCTA+AGG - chr1_4:66235625-66235644 Msa0178820:intron 30.0%
! TGTTTATCTAAGGACTTGTT+TGG - chr1_4:66235635-66235654 Msa0178820:intron 30.0%
TATCAAAACTAGGTCATGTT+TGG + chr1_4:66236041-66236060 None:intergenic 30.0%
!!! AACATGACCTAGTTTTGATA+TGG - chr1_4:66236041-66236060 Msa0178820:intron 30.0%
!!! ACATGACCTAGTTTTGATAT+GGG - chr1_4:66236042-66236061 Msa0178820:intron 30.0%
!! TTATCGAAATGCTGACTTAA+AGG + chr1_4:66236156-66236175 None:intergenic 30.0%
ATATTAACAGAAACCTTGAC+AGG - chr1_4:66236382-66236401 Msa0178820:intron 30.0%
TATTAACAGAAACCTTGACA+GGG - chr1_4:66236383-66236402 Msa0178820:intron 30.0%
!! ACATCTTCTTTGAGATTTGT+CGG + chr1_4:66236720-66236739 None:intergenic 30.0%
GCTCAATTTAGAAGTCAATT+CGG - chr1_4:66236873-66236892 Msa0178820:intron 30.0%
CACTTTGACAAAGAATTTGT+TGG - chr1_4:66236923-66236942 Msa0178820:intron 30.0%
!! GTTATAAGATGTTTGGTTCT+TGG - chr1_4:66237082-66237101 Msa0178820:intron 30.0%
CAAAATGAAGATGCTATTGT+AGG - chr1_4:66237205-66237224 Msa0178820:intron 30.0%
!! GGTCTTGTTATTGTTATGTT+TGG - chr1_4:66237260-66237279 Msa0178820:intron 30.0%
TACTCGAAATAATAAACGAC+AGG + chr1_4:66237340-66237359 None:intergenic 30.0%
! GGTGAAGGATAATTCTATTT+TGG - chr1_4:66237384-66237403 Msa0178820:intron 30.0%
! TTTTAATAGGTTTTGCGTTG+AGG - chr1_4:66237457-66237476 Msa0178820:intron 30.0%
AGCTTGCAATGCTAAAATTA+CGG - chr1_4:66237560-66237579 Msa0178820:intron 30.0%
CATTTAAACTCATGTATGCA+TGG - chr1_4:66237616-66237635 Msa0178820:intron 30.0%
ATCCGTTATATACATAGCAA+AGG + chr1_4:66237716-66237735 None:intergenic 30.0%
TCACATCTCAAATTTATTCC+AGG + chr1_4:66237820-66237839 None:intergenic 30.0%
!! ATCTGTAGCTTGTCTTTTAA+TGG - chr1_4:66237910-66237929 Msa0178820:intron 30.0%
! CTTTTCTGTCTGGTTATAAA+AGG - chr1_4:66238094-66238113 Msa0178820:intron 30.0%
ACATAAATAATGCACATTGC+AGG + chr1_4:66238129-66238148 None:intergenic 30.0%
TATAGATCAAATTAGAGGCA+GGG + chr1_4:66238208-66238227 None:intergenic 30.0%
TAGACTATAGTGATATCATC+TGG - chr1_4:66238226-66238245 Msa0178820:intron 30.0%
CTCGTATTGTAAAAAGATAG+TGG + chr1_4:66238317-66238336 None:intergenic 30.0%
CAATCATTAGAGGGAAAATT+GGG + chr1_4:66238344-66238363 None:intergenic 30.0%
TTAGACATGCAATCATTAGA+GGG + chr1_4:66238353-66238372 None:intergenic 30.0%
ATTAGACATGCAATCATTAG+AGG + chr1_4:66238354-66238373 None:intergenic 30.0%
GAGAAGAGATTGTTAAAAAG+GGG + chr1_4:66238403-66238422 None:intergenic 30.0%
TCCATTTCAACTACTATACT+TGG - chr1_4:66238556-66238575 Msa0178820:CDS 30.0%
TCCAAGTATAGTAGTTGAAA+TGG + chr1_4:66238560-66238579 None:intergenic 30.0%
CCTAGCTTGAAAGTAAAAAA+TGG + chr1_4:66238672-66238691 None:intergenic 30.0%
!!! CCATTTTTTACTTTCAAGCT+AGG - chr1_4:66238669-66238688 Msa0178820:intron 30.0%
TAAATAGACAGTTGGAGATA+TGG + chr1_4:66238763-66238782 None:intergenic 30.0%
! TTGAAGTACTTAGAGAAGTT+TGG + chr1_4:66239043-66239062 None:intergenic 30.0%
! TTAATTTGGTAGGTCAACAA+TGG + chr1_4:66239161-66239180 None:intergenic 30.0%
TACTATGAAAATTTGGGAGA+GGG + chr1_4:66239225-66239244 None:intergenic 30.0%
ATACTATGAAAATTTGGGAG+AGG + chr1_4:66239226-66239245 None:intergenic 30.0%
! GAGAATTCAAAGACTTTTGT+TGG + chr1_4:66239279-66239298 None:intergenic 30.0%
TACTCTAATGAAGCATAGTA+CGG + chr1_4:66239371-66239390 None:intergenic 30.0%
AAGAATCAAGAGTGAAAACA+GGG + chr1_4:66239474-66239493 None:intergenic 30.0%
ATTATAACAAGCTACATAGG+AGG + chr1_4:66239682-66239701 None:intergenic 30.0%
AAAAAGATCCTCATAAGAAC+CGG + chr1_4:66239788-66239807 None:intergenic 30.0%
AATCCAGGTATGTTTATATC+TGG - chr1_4:66239888-66239907 Msa0178820:CDS 30.0%
ATGCATGAGACTATTTACAA+GGG + chr1_4:66239917-66239936 None:intergenic 30.0%
TATGCATGAGACTATTTACA+AGG + chr1_4:66239918-66239937 None:intergenic 30.0%
! GATTACCTTTTTCCATACAT+TGG - chr1_4:66239991-66240010 Msa0178820:CDS 30.0%
! CATACATTGGTTATTCACAT+GGG - chr1_4:66240004-66240023 Msa0178820:CDS 30.0%
!!! TTTATTTTGGCATTTGTCAG+GGG + chr1_4:66240080-66240099 None:intergenic 30.0%
ACCATCAATACAACTACAAA+GGG + chr1_4:66240238-66240257 None:intergenic 30.0%
AACCATCAATACAACTACAA+AGG + chr1_4:66240239-66240258 None:intergenic 30.0%
TTGAATGTGATAGATGTTAG+AGG - chr1_4:66240272-66240291 Msa0178820:CDS 30.0%
ATCTTGAAGATTACAAAGGT+AGG - chr1_4:66240381-66240400 Msa0178820:CDS 30.0%
GGAATTCATCAAAACAAGAA+GGG + chr1_4:66240620-66240639 None:intergenic 30.0%
AGGAATTCATCAAAACAAGA+AGG + chr1_4:66240621-66240640 None:intergenic 30.0%
TATTTCTCGAAACTTTGCTA+TGG + chr1_4:66240694-66240713 None:intergenic 30.0%
AGCAAAGTTTCGAGAAATAA+AGG - chr1_4:66240695-66240714 Msa0178820:intron 30.0%
ATAAAGGACAACATCAATGA+AGG - chr1_4:66240711-66240730 Msa0178820:intron 30.0%
TAAAGGACAACATCAATGAA+GGG - chr1_4:66240712-66240731 Msa0178820:intron 30.0%
AATAAAATGGGAAGTTCTCA+AGG + chr1_4:66240768-66240787 None:intergenic 30.0%
!! GTGTATTGGATCTTTGATTT+TGG + chr1_4:66241101-66241120 None:intergenic 30.0%
CACTATCTCTTGAATAAATG+AGG - chr1_4:66241514-66241533 Msa0178820:CDS 30.0%
TGATCAGGTTCAGATGAAAT+TGG + chr1_4:66235154-66235173 None:intergenic 35.0%
!! TGCTGAGAAGCTTTTTGTTT+CGG + chr1_4:66235217-66235236 None:intergenic 35.0%
CCAAAACCCATATCAAAACT+AGG + chr1_4:66236051-66236070 None:intergenic 35.0%
!!! CCTAGTTTTGATATGGGTTT+TGG - chr1_4:66236048-66236067 Msa0178820:intron 35.0%
!!! TGATATGGGTTTTGGTTTTG+TGG - chr1_4:66236056-66236075 Msa0178820:intron 35.0%
! CTAACTTGCGCAATTGATAT+AGG - chr1_4:66236086-66236105 Msa0178820:intron 35.0%
TTGCGCAATTGATATAGGTT+GGG - chr1_4:66236091-66236110 Msa0178820:intron 35.0%
!! GCTGAAGCTTGTTATAGATA+TGG - chr1_4:66236219-66236238 Msa0178820:intron 35.0%
TGATGCGATTAACAAGTTAG+AGG - chr1_4:66236356-66236375 Msa0178820:intron 35.0%
TGATGGCATTATAAGAACAC+AGG - chr1_4:66236596-66236615 Msa0178820:intron 35.0%
GACAAATCTCAAAGAAGATG+TGG - chr1_4:66236719-66236738 Msa0178820:CDS 35.0%
AAATCTCAAAGAAGATGTGG+AGG - chr1_4:66236722-66236741 Msa0178820:CDS 35.0%
GATAGACTTAATAGGTTTGC+AGG - chr1_4:66236945-66236964 Msa0178820:intron 35.0%
!! AAGATGTTTGGTTCTTGGTA+TGG - chr1_4:66237087-66237106 Msa0178820:intron 35.0%
CGACAGGTATATCTAAACTA+TGG + chr1_4:66237324-66237343 None:intergenic 35.0%
!! TATTTTGAACGTGTTATGCC+TGG - chr1_4:66237434-66237453 Msa0178820:intron 35.0%
!!! GTGTTATGCCTGGTTTTAAT+AGG - chr1_4:66237444-66237463 Msa0178820:intron 35.0%
ACGCAAAACCTATTAAAACC+AGG + chr1_4:66237455-66237474 None:intergenic 35.0%
! CTTACATTATATTGGCTGAC+TGG - chr1_4:66237647-66237666 Msa0178820:intron 35.0%
GCTTAGAGAGATGAAAAGAA+AGG - chr1_4:66238011-66238030 Msa0178820:intron 35.0%
ATAGATCAAATTAGAGGCAG+GGG + chr1_4:66238207-66238226 None:intergenic 35.0%
CTATAGATCAAATTAGAGGC+AGG + chr1_4:66238209-66238228 None:intergenic 35.0%
GCAATCATTAGAGGGAAAAT+TGG + chr1_4:66238345-66238364 None:intergenic 35.0%
AAGAGATTGTTAAAAAGGGG+TGG + chr1_4:66238400-66238419 None:intergenic 35.0%
TTACTTCCTCAGCTCTTTAA+TGG - chr1_4:66238436-66238455 Msa0178820:intron 35.0%
AACATCCCATAGAACATTGT+AGG - chr1_4:66238463-66238482 Msa0178820:intron 35.0%
CCAAACCTACAATGTTCTAT+GGG + chr1_4:66238471-66238490 None:intergenic 35.0%
ACCAAACCTACAATGTTCTA+TGG + chr1_4:66238472-66238491 None:intergenic 35.0%
ATAGAACATTGTAGGTTTGG+TGG - chr1_4:66238471-66238490 Msa0178820:intron 35.0%
GGAGATATGGAAACAAGTTT+GGG + chr1_4:66238750-66238769 None:intergenic 35.0%
TGGAGATATGGAAACAAGTT+TGG + chr1_4:66238751-66238770 None:intergenic 35.0%
!! TATCTTTTAACTCTCTGACG+AGG - chr1_4:66238783-66238802 Msa0178820:intron 35.0%
ATAGTATAGGTGTCCAACAA+GGG + chr1_4:66238903-66238922 None:intergenic 35.0%
TATAGTATAGGTGTCCAACA+AGG + chr1_4:66238904-66238923 None:intergenic 35.0%
GTGATCATACGGTATAGTAT+AGG + chr1_4:66238916-66238935 None:intergenic 35.0%
ATACTATACCGTATGATCAC+AGG - chr1_4:66238916-66238935 Msa0178820:intron 35.0%
!! CAGAAGGCTTTAGATAAGAA+AGG + chr1_4:66239020-66239039 None:intergenic 35.0%
GAATACTGATGGAGTGATAT+TGG + chr1_4:66239121-66239140 None:intergenic 35.0%
! TTCAAAGACTTTTGTTGGAG+TGG + chr1_4:66239274-66239293 None:intergenic 35.0%
GGAAGAATGGTAAAGAAGAT+AGG + chr1_4:66239301-66239320 None:intergenic 35.0%
CAAAAAAACAGAGGAAAACG+AGG + chr1_4:66239330-66239349 None:intergenic 35.0%
CATAGATACGACAAAACTGA+TGG + chr1_4:66239427-66239446 None:intergenic 35.0%
CAAGAATCAAGAGTGAAAAC+AGG + chr1_4:66239475-66239494 None:intergenic 35.0%
GAGCTATGTCTTCAGAAATA+TGG + chr1_4:66239834-66239853 None:intergenic 35.0%
AGACATAGCTCAGAATATTG+AGG - chr1_4:66239843-66239862 Msa0178820:CDS 35.0%
TGTCCAGATATAAACATACC+TGG + chr1_4:66239894-66239913 None:intergenic 35.0%
GAAATATGTCGCAACTATCT+AGG - chr1_4:66239945-66239964 Msa0178820:CDS 35.0%
CCATGTGAATAACCAATGTA+TGG + chr1_4:66240006-66240025 None:intergenic 35.0%
! CCATACATTGGTTATTCACA+TGG - chr1_4:66240003-66240022 Msa0178820:CDS 35.0%
TTCACATGGGATTATACTCT+TGG - chr1_4:66240017-66240036 Msa0178820:CDS 35.0%
AGATGAACTAATGTCTGGAA+AGG - chr1_4:66240170-66240189 Msa0178820:CDS 35.0%
AATGTCTGGAAAGGCAAAAA+TGG - chr1_4:66240179-66240198 Msa0178820:CDS 35.0%
! TGGTATTGTTGTTGTAAGCA+AGG - chr1_4:66240199-66240218 Msa0178820:CDS 35.0%
! GGTATTGTTGTTGTAAGCAA+GGG - chr1_4:66240200-66240219 Msa0178820:CDS 35.0%
TCCCTTTGTAGTTGTATTGA+TGG - chr1_4:66240234-66240253 Msa0178820:CDS 35.0%
GATAGATGTTAGAGGAAATC+AGG - chr1_4:66240280-66240299 Msa0178820:CDS 35.0%
AATTGTTTGCCATTGTTCAC+AGG - chr1_4:66240328-66240347 Msa0178820:CDS 35.0%
!! AGAAGGGTGGACTATAAAAA+TGG + chr1_4:66240604-66240623 None:intergenic 35.0%
ATTCATCAAAACAAGAAGGG+TGG + chr1_4:66240617-66240636 None:intergenic 35.0%
AAAATTCTATGTTACCCTGC+AGG - chr1_4:66240737-66240756 Msa0178820:intron 35.0%
TGTGTTTGGATAGTACTGTT+TGG - chr1_4:66240861-66240880 Msa0178820:intron 35.0%
GCAATGACTTTGTAATGACA+AGG - chr1_4:66240965-66240984 Msa0178820:intron 35.0%
AGTTTCCAGGATAAAAACAC+AGG - chr1_4:66241042-66241061 Msa0178820:CDS 35.0%
TGGCTGATAATAAGGATTCT+GGG + chr1_4:66241139-66241158 None:intergenic 35.0%
ATGGCTGATAATAAGGATTC+TGG + chr1_4:66241140-66241159 None:intergenic 35.0%
ATGGAGATGGAATGGTATAA+GGG + chr1_4:66241407-66241426 None:intergenic 35.0%
TATGGAGATGGAATGGTATA+AGG + chr1_4:66241408-66241427 None:intergenic 35.0%
!! GTATCATATTTAGGTTGCGT+TGG - chr1_4:66241615-66241634 Msa0178820:CDS 35.0%
AATGGAAGGCGATGTAGTTA+CGG + chr1_4:66234976-66234995 None:intergenic 40.0%
!! AGGCGCTGTGTTGTTTAATT+TGG - chr1_4:66235255-66235274 Msa0178820:CDS 40.0%
ACCAATCTGACTGTAAACAG+CGG + chr1_4:66235281-66235300 None:intergenic 40.0%
TTTGATCGGAATACCGTTGA+CGG - chr1_4:66235307-66235326 Msa0178820:CDS 40.0%
GCTTCTATGAAAATCTCGGT+TGG - chr1_4:66235394-66235413 Msa0178820:CDS 40.0%
TAACATTCCAGCACACTCAA+CGG + chr1_4:66235443-66235462 None:intergenic 40.0%
!! ATTGCTAAAGGAAGTACTCC+TGG - chr1_4:66235511-66235530 Msa0178820:CDS 40.0%
GTGTTTGTGCTAAGATCTCT+AGG - chr1_4:66235533-66235552 Msa0178820:CDS 40.0%
TTGAACGCAATCACATGTGT+TGG - chr1_4:66235778-66235797 Msa0178820:intron 40.0%
! AGCTTGTTTCCATAAGCTCT+CGG - chr1_4:66235868-66235887 Msa0178820:CDS 40.0%
ATAAGCTATCCGAGAGCTTA+TGG + chr1_4:66235880-66235899 None:intergenic 40.0%
ATGAAAACACCTTCTACCTG+AGG - chr1_4:66235898-66235917 Msa0178820:intron 40.0%
TGAAAACACCTTCTACCTGA+GGG - chr1_4:66235899-66235918 Msa0178820:intron 40.0%
CTTGCGCAATTGATATAGGT+TGG - chr1_4:66236090-66236109 Msa0178820:intron 40.0%
! ATAGGTTGGGCTGTATTATG+AGG - chr1_4:66236104-66236123 Msa0178820:intron 40.0%
! GCTGTATTATGAGGAAGCAT+TGG - chr1_4:66236113-66236132 Msa0178820:intron 40.0%
GTCAGCATTTCGATAAGTCT+TGG - chr1_4:66236160-66236179 Msa0178820:intron 40.0%
TGCTATTAGTGTGCTTACTG+AGG - chr1_4:66236296-66236315 Msa0178820:intron 40.0%
TAGTTCATTGTCACCTCTTC+CGG - chr1_4:66236452-66236471 Msa0178820:intron 40.0%
ATCAACCATTTCAGTGTACC+TGG + chr1_4:66236580-66236599 None:intergenic 40.0%
AGGTACACTGAAATGGTTGA+TGG - chr1_4:66236579-66236598 Msa0178820:intron 40.0%
TCCAGAGCAAGAATAGAATC+CGG + chr1_4:66236681-66236700 None:intergenic 40.0%
! GATTCTATTCTTGCTCTGGA+AGG - chr1_4:66236681-66236700 Msa0178820:CDS 40.0%
GTTCTTGATTAACCCTCCTT+AGG + chr1_4:66236806-66236825 None:intergenic 40.0%
GAGGGTTAATCAAGAACTAC+TGG - chr1_4:66236809-66236828 Msa0178820:intron 40.0%
GAAGTCAATTCGGCACTAAA+TGG - chr1_4:66236883-66236902 Msa0178820:intron 40.0%
! AATTCGGCACTAAATGGACT+AGG - chr1_4:66236889-66236908 Msa0178820:intron 40.0%
! TTTGTCAAAGTGCTTGACTG+AGG + chr1_4:66236915-66236934 None:intergenic 40.0%
AAGGAAAACACTTTACCGGA+CGG + chr1_4:66237055-66237074 None:intergenic 40.0%
TGAATCTGCACTTCCAAGTT+TGG - chr1_4:66237159-66237178 Msa0178820:intron 40.0%
!! ATAATTGGCCTTGCCAAACT+TGG + chr1_4:66237175-66237194 None:intergenic 40.0%
! AAAGCTTGGTATGTCGTTTC+TGG - chr1_4:66237239-66237258 Msa0178820:intron 40.0%
CCTTCACCAGATCTTATAAG+TGG + chr1_4:66237372-66237391 None:intergenic 40.0%
CCACTTATAAGATCTGGTGA+AGG - chr1_4:66237369-66237388 Msa0178820:intron 40.0%
TGCAATGCTAAAATTACGGC+TGG - chr1_4:66237564-66237583 Msa0178820:intron 40.0%
!! CTGATCAATTGAGCGTTGAA+TGG - chr1_4:66237747-66237766 Msa0178820:intron 40.0%
CTAGAAGAACGAAGAAATCC+TGG - chr1_4:66237799-66237818 Msa0178820:intron 40.0%
! TAGAAACTCTAGGAGCTCAA+AGG - chr1_4:66237971-66237990 Msa0178820:intron 40.0%
! AGAAACTCTAGGAGCTCAAA+GGG - chr1_4:66237972-66237991 Msa0178820:intron 40.0%
! AGAAGTGAGACTTTTCTGTC+TGG - chr1_4:66238084-66238103 Msa0178820:intron 40.0%
ATGCACATTGCAGGAAAAGA+TGG + chr1_4:66238120-66238139 None:intergenic 40.0%
TAGATCAAATTAGAGGCAGG+GGG + chr1_4:66238206-66238225 None:intergenic 40.0%
TAGTGGAGTCTCATCTTAGT+TGG + chr1_4:66238300-66238319 None:intergenic 40.0%
CAATGTTCTATGGGATGTTG+TGG + chr1_4:66238462-66238481 None:intergenic 40.0%
CCCATAGAACATTGTAGGTT+TGG - chr1_4:66238468-66238487 Msa0178820:intron 40.0%
TAGGCATGCATGCTAAACAA+GGG + chr1_4:66238846-66238865 None:intergenic 40.0%
TTAGGCATGCATGCTAAACA+AGG + chr1_4:66238847-66238866 None:intergenic 40.0%
AAGGTTTGCCTGTGATCATA+CGG + chr1_4:66238927-66238946 None:intergenic 40.0%
GAACACGGATGGAATACAAA+AGG + chr1_4:66238946-66238965 None:intergenic 40.0%
AACTAGTACAAGAACACGGA+TGG + chr1_4:66238957-66238976 None:intergenic 40.0%
ACTTAGAGAAGTTTGGCAGA+AGG + chr1_4:66239036-66239055 None:intergenic 40.0%
TATGAAAATTTGGGAGAGGG+TGG + chr1_4:66239222-66239241 None:intergenic 40.0%
GAGTGAGTGCAAAAAAACAG+AGG + chr1_4:66239339-66239358 None:intergenic 40.0%
CTAATGAAGCATAGTACGGA+AGG + chr1_4:66239367-66239386 None:intergenic 40.0%
CACTCTTGATTCTTGCGTAA+AGG - chr1_4:66239480-66239499 Msa0178820:intron 40.0%
TTGTATTGTAATGCTGCTGC+AGG - chr1_4:66239630-66239649 Msa0178820:CDS 40.0%
TGCAGGTGCAAAGAATTGAT+GGG - chr1_4:66239647-66239666 Msa0178820:CDS 40.0%
CATTAGTTCATCTCTCTGAG+TGG + chr1_4:66240163-66240182 None:intergenic 40.0%
CAGAGAGATGAACTAATGTC+TGG - chr1_4:66240165-66240184 Msa0178820:CDS 40.0%
! CATTTTGAGCCTGTGAACAA+TGG + chr1_4:66240340-66240359 None:intergenic 40.0%
! TAGGATTTTTCACGTGAAGC+TGG + chr1_4:66240654-66240673 None:intergenic 40.0%
!! TAACAGCATGCTTAGCTTTG+TGG + chr1_4:66240804-66240823 None:intergenic 40.0%
TTCCAGGATAAAAACACAGG+TGG - chr1_4:66241045-66241064 Msa0178820:CDS 40.0%
TAACAACAACTACCCTTCAG+TGG - chr1_4:66241071-66241090 Msa0178820:CDS 40.0%
AACAACAACTACCCTTCAGT+GGG - chr1_4:66241072-66241091 Msa0178820:CDS 40.0%
!!! GATTTTGGTTTCCCACTGAA+GGG + chr1_4:66241086-66241105 None:intergenic 40.0%
!!! TGATTTTGGTTTCCCACTGA+AGG + chr1_4:66241087-66241106 None:intergenic 40.0%
ACGAGGATCTGTTTGTGTAT+TGG + chr1_4:66241115-66241134 None:intergenic 40.0%
GGCTGATAATAAGGATTCTG+GGG + chr1_4:66241138-66241157 None:intergenic 40.0%
TGCTCAGATGGCTGATAATA+AGG + chr1_4:66241147-66241166 None:intergenic 40.0%
TGAGCATATGAAGAAACTGG+TGG + chr1_4:66241171-66241190 None:intergenic 40.0%
GGATGAGCATATGAAGAAAC+TGG + chr1_4:66241174-66241193 None:intergenic 40.0%
TGATGTGAATGGCCATATGA+TGG + chr1_4:66241201-66241220 None:intergenic 40.0%
! TGACCATAATCATGGTTTGC+TGG + chr1_4:66241303-66241322 None:intergenic 40.0%
GTGGGTGCATTATTGTAGTA+TGG + chr1_4:66241351-66241370 None:intergenic 40.0%
TGGAGATGGAATGGTATAAG+GGG + chr1_4:66241406-66241425 None:intergenic 40.0%
TTAAGACGAAGAGCTAGATG+TGG + chr1_4:66241545-66241564 None:intergenic 40.0%
!! TGTTGACTTGTACTTTGCGA+AGG - chr1_4:66241700-66241719 Msa0178820:five_prime_UTR 40.0%
!! GTTGACTTGTACTTTGCGAA+GGG - chr1_4:66241701-66241720 Msa0178820:five_prime_UTR 40.0%
!! TTGACTTGTACTTTGCGAAG+GGG - chr1_4:66241702-66241721 Msa0178820:five_prime_UTR 40.0%
GAAACTTCTTCACCTTAGCG+AGG + chr1_4:66234755-66234774 None:intergenic 45.0%
TAGCATTCACCACCGAATCA+TGG - chr1_4:66234856-66234875 Msa0178820:three_prime_UTR 45.0%
!! CATGATGTTGGTGTTGCCTA+CGG + chr1_4:66234903-66234922 None:intergenic 45.0%
GAAGATTGCGAGCATGATGT+TGG + chr1_4:66234915-66234934 None:intergenic 45.0%
! TTCGCGTTCAGAGTAATGGA+AGG + chr1_4:66234990-66235009 None:intergenic 45.0%
!! GTCGGAACGGAGTTGTTTTA+GGG + chr1_4:66235041-66235060 None:intergenic 45.0%
TATGAAAAGGTCACGTCGTG+CGG + chr1_4:66235092-66235111 None:intergenic 45.0%
TTAACGCACTCACCTTCGTT+TGG - chr1_4:66235176-66235195 Msa0178820:CDS 45.0%
GAACGCATCAAACCAAACGA+AGG + chr1_4:66235191-66235210 None:intergenic 45.0%
! GCAGGCTTCTCATGCTTTTA+TGG - chr1_4:66235336-66235355 Msa0178820:CDS 45.0%
! GGCTTCTCATGCTTTTATGG+CGG - chr1_4:66235339-66235358 Msa0178820:CDS 45.0%
! TTCTCATGCTTTTATGGCGG+CGG - chr1_4:66235342-66235361 Msa0178820:CDS 45.0%
TCTAAGAAAACCGAACGAGC+CGG + chr1_4:66235368-66235387 None:intergenic 45.0%
AACGGACAAATCAAGAGTGG+TGG + chr1_4:66235425-66235444 None:intergenic 45.0%
CTCAACGGACAAATCAAGAG+TGG + chr1_4:66235428-66235447 None:intergenic 45.0%
GAGATCTTAGCACAAACACC+AGG + chr1_4:66235532-66235551 None:intergenic 45.0%
TTGTGCTAAGATCTCTAGGC+AGG - chr1_4:66235537-66235556 Msa0178820:CDS 45.0%
TAAGATCTCTAGGCAGGTCT+GGG - chr1_4:66235543-66235562 Msa0178820:CDS 45.0%
! AATCACATGTGTTGGTGTGC+TGG - chr1_4:66235786-66235805 Msa0178820:intron 45.0%
GCACGAGAAAGAGGAAATAG+CGG - chr1_4:66236251-66236270 Msa0178820:intron 45.0%
TGAGGCGAAGAAAAACTCCA+GGG - chr1_4:66236314-66236333 Msa0178820:intron 45.0%
AGAGGTGACAATGAACTAGC+AGG + chr1_4:66236450-66236469 None:intergenic 45.0%
AGCACCTCACTCATTACCAT+CGG + chr1_4:66236495-66236514 None:intergenic 45.0%
TGTTCCTGACAATAGTGCCA+AGG - chr1_4:66236548-66236567 Msa0178820:intron 45.0%
TCTCTCCAGGTACACTGAAA+TGG - chr1_4:66236572-66236591 Msa0178820:intron 45.0%
GCTTAGGGAAATGGAATTGC+CGG - chr1_4:66236659-66236678 Msa0178820:intron 45.0%
AACTCTGATTCCAAACCAGC+AGG + chr1_4:66236768-66236787 None:intergenic 45.0%
ATCAGAGTTGCAGCAGCTTA+AGG - chr1_4:66236779-66236798 Msa0178820:CDS 45.0%
TTCCTTCTGCAACAACTCCT+CGG + chr1_4:66236841-66236860 None:intergenic 45.0%
AGGTAACTTGAAGCAAGCTG+CGG - chr1_4:66236965-66236984 Msa0178820:intron 45.0%
! TAGAGAACATGCAGCACTGA+TGG - chr1_4:66237016-66237035 Msa0178820:intron 45.0%
AGGAAAACACTTTACCGGAC+GGG + chr1_4:66237054-66237073 None:intergenic 45.0%
AGGGTCTCTCAAACAAAGCT+TGG - chr1_4:66237225-66237244 Msa0178820:intron 45.0%
CAGAGGCAACTAGAAACTCT+AGG - chr1_4:66237961-66237980 Msa0178820:intron 45.0%
TTGTGGCCATTAAAGAGCTG+AGG + chr1_4:66238445-66238464 None:intergenic 45.0%
! TCCCAGAAAAGCATGCACAT+TGG - chr1_4:66238814-66238833 Msa0178820:intron 45.0%
! GCCAATGTGCATGCTTTTCT+GGG + chr1_4:66238818-66238837 None:intergenic 45.0%
! TGCCAATGTGCATGCTTTTC+TGG + chr1_4:66238819-66238838 None:intergenic 45.0%
AACAGAGGAAAACGAGGATG+CGG + chr1_4:66239324-66239343 None:intergenic 45.0%
! AAGCATAGTACGGAAGGTAC+TGG + chr1_4:66239361-66239380 None:intergenic 45.0%
CTGCAGGTGCAAAGAATTGA+TGG - chr1_4:66239646-66239665 Msa0178820:CDS 45.0%
AAGATCCTCATAAGAACCGG+TGG + chr1_4:66239785-66239804 None:intergenic 45.0%
ACAACTGTTGCTGCAAATCC+AGG - chr1_4:66239873-66239892 Msa0178820:CDS 45.0%
TGTTGTTGTAAGCAAGGGCA+TGG - chr1_4:66240205-66240224 Msa0178820:CDS 45.0%
GTGAAGCTGGAAAGATCACA+AGG + chr1_4:66240641-66240660 None:intergenic 45.0%
CTTCAATCATTTCCCTGCAC+TGG + chr1_4:66240996-66241015 None:intergenic 45.0%
GATGTTCAGAGACAAGTAGC+TGG - chr1_4:66241015-66241034 Msa0178820:CDS 45.0%
!! AGCCACCTGTGTTTTTATCC+TGG + chr1_4:66241050-66241069 None:intergenic 45.0%
! TAATAAGGATTCTGGGGACG+AGG + chr1_4:66241132-66241151 None:intergenic 45.0%
! TGAATGGCCATATGATGGAG+GGG + chr1_4:66241196-66241215 None:intergenic 45.0%
! GTGAATGGCCATATGATGGA+GGG + chr1_4:66241197-66241216 None:intergenic 45.0%
TGTGAATGGCCATATGATGG+AGG + chr1_4:66241198-66241217 None:intergenic 45.0%
!! CCATAATCATGGTTTGCTGG+TGG + chr1_4:66241300-66241319 None:intergenic 45.0%
CCACCAGCAAACCATGATTA+TGG - chr1_4:66241297-66241316 Msa0178820:CDS 45.0%
! AGGCAGGTTGACCATAATCA+TGG + chr1_4:66241311-66241330 None:intergenic 45.0%
GAGATGGAATGGTATAAGGG+GGG + chr1_4:66241404-66241423 None:intergenic 45.0%
GGAGATGGAATGGTATAAGG+GGG + chr1_4:66241405-66241424 None:intergenic 45.0%
TGGAGGATATGGAGATGGAA+TGG + chr1_4:66241415-66241434 None:intergenic 45.0%
TTATAGTAGCCACCTTGGTG+AGG + chr1_4:66241438-66241457 None:intergenic 45.0%
!! GCGTTGGTTTGCATTGTCAT+TGG - chr1_4:66241631-66241650 Msa0178820:CDS 45.0%
ATTGCGACGAGGCCATGATT+CGG + chr1_4:66234871-66234890 None:intergenic 50.0%
AAGGCGATGTAGTTACGGAG+GGG + chr1_4:66234971-66234990 None:intergenic 50.0%
GAAGGCGATGTAGTTACGGA+GGG + chr1_4:66234972-66234991 None:intergenic 50.0%
GTGCTTCGCGTTCAGAGTAA+TGG + chr1_4:66234994-66235013 None:intergenic 50.0%
GGGTTTGAAGATCGTCTTCG+AGG + chr1_4:66235021-66235040 None:intergenic 50.0%
!! GGTCGGAACGGAGTTGTTTT+AGG + chr1_4:66235042-66235061 None:intergenic 50.0%
AGTGACGTTCAAGGTCGGAA+CGG + chr1_4:66235054-66235073 None:intergenic 50.0%
ATCGGAGTGACGTTCAAGGT+CGG + chr1_4:66235059-66235078 None:intergenic 50.0%
ATGGATCGGAGTGACGTTCA+AGG + chr1_4:66235063-66235082 None:intergenic 50.0%
ATGAAAAGGTCACGTCGTGC+GGG + chr1_4:66235091-66235110 None:intergenic 50.0%
GTGAGTGCGTTAACGTGATC+AGG + chr1_4:66235169-66235188 None:intergenic 50.0%
GCCGCTGTTTACAGTCAGAT+TGG - chr1_4:66235277-66235296 Msa0178820:CDS 50.0%
GATTTGTCCGTTGAGTGTGC+TGG - chr1_4:66235433-66235452 Msa0178820:CDS 50.0%
GCTTATGCTTGCTCAAGCTC+AGG - chr1_4:66235468-66235487 Msa0178820:CDS 50.0%
CTAAGATCTCTAGGCAGGTC+TGG - chr1_4:66235542-66235561 Msa0178820:CDS 50.0%
ACAGACACAGACACGAATGC+CGG - chr1_4:66235705-66235724 Msa0178820:intron 50.0%
CAACATGTCAACGTCGAGAC+CGG + chr1_4:66235727-66235746 None:intergenic 50.0%
CGACGTTGACATGTTGACAG+TGG - chr1_4:66235731-66235750 Msa0178820:intron 50.0%
GTGCTGGACACACCTTTGAT+CGG - chr1_4:66235802-66235821 Msa0178820:intron 50.0%
TAATCTCAGTCTCAGCCCTC+AGG + chr1_4:66235917-66235936 None:intergenic 50.0%
ACTAGAGCTGCACGAGAAAG+AGG - chr1_4:66236242-66236261 Msa0178820:intron 50.0%
CGAGAAAGAGGAAATAGCGG+AGG - chr1_4:66236254-66236273 Msa0178820:intron 50.0%
! AAATAGCGGAGGAGATTGCG+CGG - chr1_4:66236265-66236284 Msa0178820:intron 50.0%
CTGAGGCGAAGAAAAACTCC+AGG - chr1_4:66236313-66236332 Msa0178820:intron 50.0%
GAGGCGAAGAAAAACTCCAG+GGG - chr1_4:66236315-66236334 Msa0178820:intron 50.0%
AAACCTTGACAGGGCTGTCA+AGG - chr1_4:66236392-66236411 Msa0178820:intron 50.0%
GGTGACAATGAACTAGCAGG+AGG + chr1_4:66236447-66236466 None:intergenic 50.0%
!! CATCGGCTTCACCATAGCAA+AGG + chr1_4:66236478-66236497 None:intergenic 50.0%
! CTTTGCTATGGTGAAGCCGA+TGG - chr1_4:66236476-66236495 Msa0178820:intron 50.0%
! GAAGCCGATGGTAATGAGTG+AGG - chr1_4:66236488-66236507 Msa0178820:intron 50.0%
! GATGGTAATGAGTGAGGTGC+TGG - chr1_4:66236494-66236513 Msa0178820:intron 50.0%
AGAGCCTTGGCACTATTGTC+AGG + chr1_4:66236555-66236574 None:intergenic 50.0%
AGCAAGCTAGTGAGCTAACC+CGG - chr1_4:66236631-66236650 Msa0178820:intron 50.0%
CATTTCCCTAAGCCTAACCC+GGG + chr1_4:66236652-66236671 None:intergenic 50.0%
CCATTTCCCTAAGCCTAACC+CGG + chr1_4:66236653-66236672 None:intergenic 50.0%
GCCGGATTCTATTCTTGCTC+TGG - chr1_4:66236677-66236696 Msa0178820:CDS 50.0%
TGCAGCAGCTTAAGGACCTA+AGG - chr1_4:66236787-66236806 Msa0178820:CDS 50.0%
AGCAGCTTAAGGACCTAAGG+AGG - chr1_4:66236790-66236809 Msa0178820:CDS 50.0%
GCAGCTTAAGGACCTAAGGA+GGG - chr1_4:66236791-66236810 Msa0178820:CDS 50.0%
CTGCACTTCCAAGTTTGGCA+AGG - chr1_4:66237164-66237183 Msa0178820:intron 50.0%
TTTGGGAGAGGGTGGTTGAA+TGG + chr1_4:66239214-66239233 None:intergenic 50.0%
ACAGAGGAAAACGAGGATGC+GGG + chr1_4:66239323-66239342 None:intergenic 50.0%
AAAACAGGGCCTCCACACTT+GGG + chr1_4:66239460-66239479 None:intergenic 50.0%
CCGGTGGATGTCATCAACTT+GGG + chr1_4:66239769-66239788 None:intergenic 50.0%
!! CCCAAGTTGATGACATCCAC+CGG - chr1_4:66239766-66239785 Msa0178820:CDS 50.0%
ACCGGTGGATGTCATCAACT+TGG + chr1_4:66239770-66239789 None:intergenic 50.0%
!! GACATCCACCGGTTCTTATG+AGG - chr1_4:66239777-66239796 Msa0178820:CDS 50.0%
GTCAGGGGTAATCAAGTGAG+AGG + chr1_4:66240065-66240084 None:intergenic 50.0%
GGCAGCTTCAATCTGCTTGT+AGG + chr1_4:66240673-66240692 None:intergenic 50.0%
TTCTCAAGGTCTTGCCTGCA+GGG + chr1_4:66240754-66240773 None:intergenic 50.0%
TGACAAGGAACATCCAGTGC+AGG - chr1_4:66240980-66240999 Msa0178820:intron 50.0%
GACAAGGAACATCCAGTGCA+GGG - chr1_4:66240981-66241000 Msa0178820:intron 50.0%
! AGTAGCTGGTCTGAGTTTCC+AGG - chr1_4:66241029-66241048 Msa0178820:CDS 50.0%
GAAACTGGTGGTTGCTCAGA+TGG + chr1_4:66241159-66241178 None:intergenic 50.0%
! GAATGGCCATATGATGGAGG+GGG + chr1_4:66241195-66241214 None:intergenic 50.0%
! GAGGAGGCTGATGATGTGAA+TGG + chr1_4:66241212-66241231 None:intergenic 50.0%
! GATGTTGGCGGGATTTGGTA+TGG + chr1_4:66241237-66241256 None:intergenic 50.0%
! CAGTTGATGTTGGCGGGATT+TGG + chr1_4:66241242-66241261 None:intergenic 50.0%
! TACAGGGCAGTTGATGTTGG+CGG + chr1_4:66241249-66241268 None:intergenic 50.0%
TATGGTCAACCTGCCTATCC+TGG - chr1_4:66241315-66241334 Msa0178820:CDS 50.0%
! TGTTGCTGTTGTGGGTGTGT+GGG + chr1_4:66241369-66241388 None:intergenic 50.0%
! TTGTTGCTGTTGTGGGTGTG+TGG + chr1_4:66241370-66241389 None:intergenic 50.0%
! GACCAGGTTGTTGCTGTTGT+GGG + chr1_4:66241377-66241396 None:intergenic 50.0%
TGAGGTGGAGGATATGGAGA+TGG + chr1_4:66241420-66241439 None:intergenic 50.0%
GCTGCTTATAGTAGCCACCT+TGG + chr1_4:66241443-66241462 None:intergenic 50.0%
! AATGTGTGTCGACGTGGCAG+TGG + chr1_4:66234803-66234822 None:intergenic 55.0%
! GAAGGGAATGTGTGTCGACG+TGG + chr1_4:66234809-66234828 None:intergenic 55.0%
GGTGAATGCTAACGTGTGCG+TGG + chr1_4:66234847-66234866 None:intergenic 55.0%
!! GATGTTGGTGTTGCCTACGG+CGG + chr1_4:66234900-66234919 None:intergenic 55.0%
GAGGGGACGGTAGAGATCTA+CGG + chr1_4:66234954-66234973 None:intergenic 55.0%
CGATGTAGTTACGGAGGGGA+CGG + chr1_4:66234967-66234986 None:intergenic 55.0%
GGAAGGCGATGTAGTTACGG+AGG + chr1_4:66234973-66234992 None:intergenic 55.0%
TGAAAAGGTCACGTCGTGCG+GGG + chr1_4:66235090-66235109 None:intergenic 55.0%
ATCGGAATACCGTTGACGGC+CGG - chr1_4:66235311-66235330 Msa0178820:CDS 55.0%
CTGGACACACCTTTGATCGG+AGG - chr1_4:66235805-66235824 Msa0178820:intron 55.0%
! GCACTGACACCTCCGATCAA+AGG + chr1_4:66235817-66235836 None:intergenic 55.0%
AGTCTCAGCCCTCAGGTAGA+AGG + chr1_4:66235910-66235929 None:intergenic 55.0%
GAGGAGATTGCGCGGTTGAA+GGG - chr1_4:66236273-66236292 Msa0178820:intron 55.0%
TCTCCTTGACAGCCCTGTCA+AGG + chr1_4:66236398-66236417 None:intergenic 55.0%
ACCTCTTCCGGCCTTTGCTA+TGG - chr1_4:66236464-66236483 Msa0178820:intron 55.0%
ACCATAGCAAAGGCCGGAAG+AGG + chr1_4:66236468-66236487 None:intergenic 55.0%
GGCTTCACCATAGCAAAGGC+CGG + chr1_4:66236474-66236493 None:intergenic 55.0%
ATAGTGCCAAGGCTCTCTCC+AGG - chr1_4:66236559-66236578 Msa0178820:intron 55.0%
AGTGTACCTGGAGAGAGCCT+TGG + chr1_4:66236568-66236587 None:intergenic 55.0%
GCAAGCTAGTGAGCTAACCC+GGG - chr1_4:66236632-66236651 Msa0178820:intron 55.0%
CTAGTGAGCTAACCCGGGTT+AGG - chr1_4:66236637-66236656 Msa0178820:intron 55.0%
! AGCTAACCCGGGTTAGGCTT+AGG - chr1_4:66236643-66236662 Msa0178820:intron 55.0%
! GCTAACCCGGGTTAGGCTTA+GGG - chr1_4:66236644-66236663 Msa0178820:intron 55.0%
! CCGGGTTAGGCTTAGGGAAA+TGG - chr1_4:66236650-66236669 Msa0178820:intron 55.0%
TGGAGGCTGTCCAGATCAGT+GGG - chr1_4:66236739-66236758 Msa0178820:CDS 55.0%
AGAACTACTGGTCCAGACCG+AGG - chr1_4:66236821-66236840 Msa0178820:intron 55.0%
TCTGCAACAACTCCTCGGTC+TGG + chr1_4:66236836-66236855 None:intergenic 55.0%
GACCGAGGAGTTGTTGCAGA+AGG - chr1_4:66236836-66236855 Msa0178820:intron 55.0%
AAGCTGCGGAGAGTGATGCT+AGG - chr1_4:66236979-66236998 Msa0178820:intron 55.0%
ACTTTACCGGACGGGCATCA+AGG + chr1_4:66237046-66237065 None:intergenic 55.0%
! ACTCTAGGAGCTCAAAGGGC+TGG - chr1_4:66237976-66237995 Msa0178820:intron 55.0%
! CTCTAGGAGCTCAAAGGGCT+GGG - chr1_4:66237977-66237996 Msa0178820:intron 55.0%
GGCTCAAAGTCGACCCTTGT+TGG - chr1_4:66238887-66238906 Msa0178820:intron 55.0%
AACGAGGATGCGGGGAAGAA+TGG + chr1_4:66239314-66239333 None:intergenic 55.0%
CAGAGGAAAACGAGGATGCG+GGG + chr1_4:66239322-66239341 None:intergenic 55.0%
TGCATCACAGCTCCCAAGTG+TGG - chr1_4:66239445-66239464 Msa0178820:intron 55.0%
ATCACAGCTCCCAAGTGTGG+AGG - chr1_4:66239448-66239467 Msa0178820:intron 55.0%
GAAAACAGGGCCTCCACACT+TGG + chr1_4:66239461-66239480 None:intergenic 55.0%
GTTCTCAAGGTCTTGCCTGC+AGG + chr1_4:66240755-66240774 None:intergenic 55.0%
GCTCATCCCCCTCCATCATA+TGG - chr1_4:66241186-66241205 Msa0178820:CDS 55.0%
! GGGATTTGGTATGGAGGAGG+AGG + chr1_4:66241228-66241247 None:intergenic 55.0%
! GTTGGCGGGATTTGGTATGG+AGG + chr1_4:66241234-66241253 None:intergenic 55.0%
! ACAGGGCAGTTGATGTTGGC+GGG + chr1_4:66241248-66241267 None:intergenic 55.0%
! GGGTACAGGGCAGTTGATGT+TGG + chr1_4:66241252-66241271 None:intergenic 55.0%
GTCAACCTGCCTATCCTGGA+TGG - chr1_4:66241319-66241338 Msa0178820:CDS 55.0%
TAGTATGGAGCACGCCATCC+AGG + chr1_4:66241336-66241355 None:intergenic 55.0%
CACCCACAACAGCAACAACC+TGG - chr1_4:66241372-66241391 Msa0178820:CDS 55.0%
! GGACCAGGTTGTTGCTGTTG+TGG + chr1_4:66241378-66241397 None:intergenic 55.0%
CCTTGGTGAGGTGGAGGATA+TGG + chr1_4:66241426-66241445 None:intergenic 55.0%
CCATATCCTCCACCTCACCA+AGG - chr1_4:66241423-66241442 Msa0178820:CDS 55.0%
TATCCTCCACCTCACCAAGG+TGG - chr1_4:66241426-66241445 Msa0178820:CDS 55.0%
TAGTAGCCACCTTGGTGAGG+TGG + chr1_4:66241435-66241454 None:intergenic 55.0%
TCGCAATCTTCCTCCGCCGT+AGG - chr1_4:66234884-66234903 Msa0178820:three_prime_UTR 60.0%
TCGTGCGGGGAGAGATGGAT+CGG + chr1_4:66235077-66235096 None:intergenic 60.0%
AAGCATGAGAAGCCTGCCGC+CGG + chr1_4:66235333-66235352 None:intergenic 60.0%
! CATGCTTTTATGGCGGCGGC+CGG - chr1_4:66235346-66235365 Msa0178820:CDS 60.0%
GGAGGAGATTGCGCGGTTGA+AGG - chr1_4:66236272-66236291 Msa0178820:intron 60.0%
GTGGAGGCTGTCCAGATCAG+TGG - chr1_4:66236738-66236757 Msa0178820:CDS 60.0%
GGAGGCTGTCCAGATCAGTG+GGG - chr1_4:66236740-66236759 Msa0178820:CDS 60.0%
GAGGCTGTCCAGATCAGTGG+GGG - chr1_4:66236741-66236760 Msa0178820:CDS 60.0%
AGGCTGTCCAGATCAGTGGG+GGG - chr1_4:66236742-66236761 Msa0178820:CDS 60.0%
TACCGGACGGGCATCAAGGA+TGG + chr1_4:66237042-66237061 None:intergenic 60.0%
! GGCGGGATTTGGTATGGAGG+AGG + chr1_4:66241231-66241250 None:intergenic 60.0%
! CTGCTGCTGATGGACCTGAG+GGG + chr1_4:66241277-66241296 None:intergenic 60.0%
! GCTGCTGCTGATGGACCTGA+GGG + chr1_4:66241278-66241297 None:intergenic 60.0%
TTGCTGGTGGCTGCTGCTGA+TGG + chr1_4:66241287-66241306 None:intergenic 60.0%
TGGAGCACGCCATCCAGGAT+AGG + chr1_4:66241331-66241350 None:intergenic 60.0%
GGAATGGTATAAGGGGGGCG+AGG + chr1_4:66241399-66241418 None:intergenic 60.0%
TAGCCACCTTGGTGAGGTGG+AGG + chr1_4:66241432-66241451 None:intergenic 60.0%
! GCGACGAGGCCATGATTCGG+TGG + chr1_4:66234868-66234887 None:intergenic 65.0%
GGCGGAGGAAGATTGCGACG+AGG + chr1_4:66234882-66234901 None:intergenic 65.0%
!! GTTGGTGTTGCCTACGGCGG+AGG + chr1_4:66234897-66234916 None:intergenic 65.0%
TCACGTCGTGCGGGGAGAGA+TGG + chr1_4:66235082-66235101 None:intergenic 65.0%
GGAATACCGTTGACGGCCGG+CGG - chr1_4:66235314-66235333 Msa0178820:CDS 65.0%
GGCCATCCTTGATGCCCGTC+CGG - chr1_4:66237037-66237056 Msa0178820:intron 65.0%
GACCTGAGGGGCTGGGTACA+GGG + chr1_4:66241265-66241284 None:intergenic 65.0%
! GCTGATGGACCTGAGGGGCT+GGG + chr1_4:66241272-66241291 None:intergenic 65.0%
! TGCTGATGGACCTGAGGGGC+TGG + chr1_4:66241273-66241292 None:intergenic 65.0%
! GGCTGCTGCTGATGGACCTG+AGG + chr1_4:66241279-66241298 None:intergenic 65.0%
GCACGCCATCCAGGATAGGC+AGG + chr1_4:66241327-66241346 None:intergenic 65.0%
GTATAAGGGGGGCGAGGACC+AGG + chr1_4:66241393-66241412 None:intergenic 65.0%
CAGCAGGCCCCCCACTGATC+TGG + chr1_4:66236752-66236771 None:intergenic 70.0%
CAGATCAGTGGGGGGCCTGC+TGG - chr1_4:66236750-66236769 Msa0178820:CDS 70.0%
! CAGTGGGGGGCCTGCTGGTT+TGG - chr1_4:66236755-66236774 Msa0178820:CDS 70.0%
TGCCCTGTACCCAGCCCCTC+AGG - chr1_4:66241260-66241279 Msa0178820:CDS 70.0%
GGACCTGAGGGGCTGGGTAC+AGG + chr1_4:66241266-66241285 None:intergenic 70.0%
TACCGTTGACGGCCGGCGGC+AGG - chr1_4:66235318-66235337 Msa0178820:CDS 75.0%
AGCCTGCCGCCGGCCGTCAA+CGG + chr1_4:66235323-66235342 None:intergenic 75.0%
!! ATGGCGGCGGCCGGCTCGTT+CGG - chr1_4:66235355-66235374 Msa0178820:CDS 75.0%
AAGCTGCGCTGCAGCGCCCC+TGG + chr1_4:66236334-66236353 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 66234741 66241829 66234741 ID=Msa0178820;Name=Msa0178820
chr1_4 mRNA 66234741 66241829 66234741 ID=Msa0178820-mRNA-1;Parent=Msa0178820;Name=Msa0178820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=134|1|1|1|1|1|8|362|872
chr1_4 exon 66234741 66235633 66234741 ID=Msa0178820-mRNA-1:exon:21648;Parent=Msa0178820-mRNA-1
chr1_4 exon 66235812 66235915 66235812 ID=Msa0178820-mRNA-1:exon:21647;Parent=Msa0178820-mRNA-1
chr1_4 exon 66236172 66236220 66236172 ID=Msa0178820-mRNA-1:exon:21646;Parent=Msa0178820-mRNA-1
chr1_4 exon 66236676 66236816 66236676 ID=Msa0178820-mRNA-1:exon:21645;Parent=Msa0178820-mRNA-1
chr1_4 exon 66238538 66238606 66238538 ID=Msa0178820-mRNA-1:exon:21644;Parent=Msa0178820-mRNA-1
chr1_4 exon 66239324 66239413 66239324 ID=Msa0178820-mRNA-1:exon:21643;Parent=Msa0178820-mRNA-1
chr1_4 exon 66239512 66240462 66239512 ID=Msa0178820-mRNA-1:exon:21642;Parent=Msa0178820-mRNA-1
chr1_4 exon 66241012 66241829 66241012 ID=Msa0178820-mRNA-1:exon:21641;Parent=Msa0178820-mRNA-1
chr1_4 five_prime_UTR 66241696 66241829 66241696 ID=Msa0178820-mRNA-1:five_prime_utr;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66241012 66241695 66241012 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66239512 66240462 66239512 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66239324 66239413 66239324 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66238538 66238606 66238538 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66236676 66236816 66236676 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66236172 66236220 66236172 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66235812 66235915 66235812 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 CDS 66235103 66235633 66235103 ID=Msa0178820-mRNA-1:cds;Parent=Msa0178820-mRNA-1
chr1_4 three_prime_UTR 66234741 66235102 66234741 ID=Msa0178820-mRNA-1:three_prime_utr;Parent=Msa0178820-mRNA-1
Gene Sequence

>Msa0178820

ATGGCCTCGTCGCAATCTTCCTCCGCCGTAGGCAACACCAACATCATGCTCGCAATCTTCGAGAAGAAAACAAACACCGTAGATCTCTACCGTCCCCTCCGTAACTACATCGCCTTCCATTACTCTGAACGCGAAGCACAAAACCTCGAAGACGATCTTCAAACCCTAAAACAACTCCGTTCCGACCTTGAACGTCACTCCGATCCATCTCTCCCCGCACGACGTGACCTTTTCATAACCTATTTCAAAGCTCTATGTCAAACCGAAACTCGATTTCCAATTTCATCTGAACCTGATCACGTTAACGCACTCACCTTCGTTTGGTTTGATGCGTTCAAACCGAAACAAAAAGCTTCTCAGCAAAATATTCATCTTGAGAAAGGCGCTGTGTTGTTTAATTTGGCCGCTGTTTACAGTCAGATTGGTTTAACATTTGATCGGAATACCGTTGACGGCCGGCGGCAGGCTTCTCATGCTTTTATGGCGGCGGCCGGCTCGTTCGGTTTTCTTAGAGAGAATGCTTCTATGAAAATCTCGGTTGGAAATTCCACCACTCTTGATTTGTCCGTTGAGTGTGCTGGAATGTTAGAGAAGCTTATGCTTGCTCAAGCTCAGGAATGTGTGTTTGAAAACACTATTGCTAAAGGAAGTACTCCTGGTGTTTGTGCTAAGATCTCTAGGCAGGTTGGGCTGTATTATGAGGAAGCATTGGCTGCACTGAATGTTGCGCCTTTAAGTCAGCATTTCGATAAGTCTTGGATAGTTCATGTGCAATTGAAGACAGCTATTTTCTATGCTGAAGCTTGTTATAGATATGGACTAGAGCTGCACGAGAAAGAGGAAATAGCGGAGGAGATTGCGCGGTTGAAGGGTGCTATTAGTGTGCTTACTGAGGCGAAGAAAAACTCCAGGGGCGCTGCAGCGCAGCTTCTTGATGCGATTAACAAGTTAGAGGCTAATATTAACAGAAACCTTGACAGGGCTGTCAAGGAGAATGATAGAGTTTACTTGATGAGAGTTCCTCCTGCTAGTTCATTGTCACCTCTTCCGGCCTTTGCTATGGTGAAGCCGATGGTAATGAGTGAGGTGCTGGATGCGAGTAAAGAGAAGATGTTTGCAAGTCTTGTTCCTGACAATAGTGCCAAGGCTCTCTCCAGGTACACTGAAATGGTTGATGGCATTATAAGAACACAGGCTGAGAAGTTGCAGCAAGCTAGTGAGCTAACCCGGGTTAGGCTTAGGGAAATGGAATTGCCGGATTCTATTCTTGCTCTGGAAGGAAATTTTACTCTACCGACAAATCTCAAAGAAGATGTGGAGGCTGTCCAGATCAGTGGGGGGCCTGCTGGTTTGGAATCAGAGTTGCAGCAGCTTAAGGACCTAAGGAGGGTTAATCAAGAACTACTGGTCCAGACCGAGGAGTTGTTGCAGAAGGAATCAAGAGAAGATGCTCAATTTAGAAGTCAATTCGGCACTAAATGGACTAGGCCTCAGTCAAGCACTTTGACAAAGAATTTGTTGGATAGACTTAATAGGTTTGCAGGTAACTTGAAGCAAGCTGCGGAGAGTGATGCTAGGATTGAGCGTTCAGTTAGAGAACATGCAGCACTGATGGCCATCCTTGATGCCCGTCCGATTGAATCTGCACTTCCAAGTTTGGCAAGGCCAATTATGTCTTTTGATCAAAATGAAGATGCTATTGTAGGGTCTCTCAAACAAAGCTTGAGGCAACTAGAAACTCTAGGAGCTCAAAGGGCTGGGCTTGAAGACATGCTTAGAGAGATGAAAAGAAAGGATGATATATTGCCCAAGTTGATGACATCCACCGGTTCTTATGAGGATCTTTTTAAAAAGGAGATAGCAAAATATGACCATATTTCTGAAGACATAGCTCAGAATATTGAGGCACAAGAACAACTGTTGCTGCAAATCCAGGCTCAAAATGATGATTTTTCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAAAAATCCTACAAGCAGATTGAAGCTGCCATAGCAAAGTTTCGAGAAATAAAGGACAACATCAATGAAGGGTTAAAATTCTATGTTACCCTGCAGGACGCAATCACAAATGTAAAGCAGCAGAGCAATGACTTTGTAATGACAAGGAACATCCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTAGCTGGTCTGAGTTTCCAGGATAAAAACACAGGTGGCTATAACAACAACTACCCTTCAGTGGGAAACCAAAATCAAAGATCCAATACACAAACAGATCCTCGTCCCCAGAATCCTTATTATCAGCCATCTGAGCAACCACCAGTTTCTTCATATGCTCATCCCCCTCCATCATATGGCCATTCACATCATCAGCCTCCTCCTCCATACCAAATCCCGCCAACATCAACTGCCCTGTACCCAGCCCCTCAGGTCCATCAGCAGCAGCCACCAGCAAACCATGATTATGGTCAACCTGCCTATCCTGGATGGCGTGCTCCATACTACAATAATGCACCCACACACCCACAACAGCAACAACCTGGTCCTCGCCCCCCTTATACCATTCCATCTCCATATCCTCCACCTCACCAAGGTGGCTACTATAAGCAGCAATAG
Protein sequence

>Msa0178820

MASSQSSSAVGNTNIMLAIFEKKTNTVDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDLERHSDPSLPARRDLFITYFKALCQTETRFPISSEPDHVNALTFVWFDAFKPKQKASQQNIHLEKGAVLFNLAAVYSQIGLTFDRNTVDGRRQASHAFMAAAGSFGFLRENASMKISVGNSTTLDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALNVAPLSQHFDKSWIVHVQLKTAIFYAEACYRYGLELHEKEEIAEEIARLKGAISVLTEAKKNSRGAAAQLLDAINKLEANINRNLDRAVKENDRVYLMRVPPASSLSPLPAFAMVKPMVMSEVLDASKEKMFASLVPDNSAKALSRYTEMVDGIIRTQAEKLQQASELTRVRLREMELPDSILALEGNFTLPTNLKEDVEAVQISGGPAGLESELQQLKDLRRVNQELLVQTEELLQKESREDAQFRSQFGTKWTRPQSSTLTKNLLDRLNRFAGNLKQAAESDARIERSVREHAALMAILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLREMKRKDDILPKLMTSTGSYEDLFKKEIAKYDHISEDIAQNIEAQEQLLLQIQAQNDDFSVIFNLEDYKASREKSYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDKNTGGYNNNYPSVGNQNQRSNTQTDPRPQNPYYQPSEQPPVSSYAHPPPSYGHSHHQPPPPYQIPPTSTALYPAPQVHQQQPPANHDYGQPAYPGWRAPYYNNAPTHPQQQQPGPRPPYTIPSPYPPPHQGGYYKQQ*