AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1265870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265870 MtrunA17_Chr4g0071331 90.206 388 28 3 1 388 1 378 0.0 716
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 103 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTGGCCTCGTTCTTA+TGG 0.166432 8_2:-70485405 Msa1265870:CDS
ATCTTTGGCCTCGTTCTTAT+GGG 0.226475 8_2:-70485404 Msa1265870:CDS
ATTCGCCCTGCTGACGTTAA+TGG 0.233739 8_2:-70485345 Msa1265870:intron
TTGAAGCATTTCAGACTAAA+AGG 0.234226 8_2:-70487751 Msa1265870:CDS
CTCAATTTCTCCTCCCTTGA+AGG 0.247560 8_2:+70484100 None:intergenic
AGGATATGGAAGATTAATTT+AGG 0.272587 8_2:+70488258 None:intergenic
ATCTTACAGGGGAGCATCTT+TGG 0.274682 8_2:-70485419 Msa1265870:intron
CTTCAAAGGGGAATAGTAAT+TGG 0.307261 8_2:+70487768 None:intergenic
TACACGCAGTATCAACTTTC+CGG 0.310484 8_2:-70488108 Msa1265870:CDS
ATGTACATGGCAGTCTGTTA+TGG 0.311136 8_2:-70484679 Msa1265870:CDS
GTGGTTGTCATCATGCTTTA+AGG 0.314766 8_2:+70488211 None:intergenic
CACTGAGAGTTGTTCCAAAA+TGG 0.332819 8_2:-70487077 Msa1265870:CDS
TACTATGGGGAATGCATAAC+TGG 0.334191 8_2:-70485231 Msa1265870:CDS
TCAAGGGGAAACAAGTACTA+TGG 0.338462 8_2:-70485246 Msa1265870:CDS
CGGAGTATGTGAATCTTATA+TGG 0.339164 8_2:-70484021 Msa1265870:CDS
TGTACATGGCAGTCTGTTAT+GGG 0.367519 8_2:-70484678 Msa1265870:CDS
GTCCAAAGCAGCTTCTTTGT+TGG 0.368366 8_2:+70485185 None:intergenic
TGATAGACCAGAAGCTTCAT+TGG 0.369693 8_2:-70487256 Msa1265870:CDS
CCCCTTCAAGATGAAGGATA+TGG 0.377793 8_2:+70488244 None:intergenic
TGCTTTCCACATTATTAGAA+TGG 0.377837 8_2:-70484138 Msa1265870:CDS
GTTGGCTGGTCTAAGACATT+TGG 0.386468 8_2:+70485203 None:intergenic
GAAACTGGAAACGGAGGATT+AGG 0.388918 8_2:+70488055 None:intergenic
TACATTCCCAATGAAGCTTC+TGG 0.389428 8_2:+70487249 None:intergenic
TTAAAATAACCTCAGGTTAG+AGG 0.392590 8_2:-70484721 Msa1265870:intron
TTCCATATCCTTCATCTTGA+AGG 0.393402 8_2:-70488246 Msa1265870:five_prime_UTR
ACAGGTGTGGGATGCTCTTA+AGG 0.395646 8_2:-70487298 Msa1265870:intron
TCAAACCGCCACTACTTGTC+GGG 0.402780 8_2:-70488160 Msa1265870:CDS
AAAGCAGCTTCTTTGTTGGC+TGG 0.406826 8_2:+70485189 None:intergenic
CCCTTACCATTAACGTCAGC+AGG 0.409584 8_2:+70485339 None:intergenic
TGGTGAATGTTGTTAGAAAC+TGG 0.410462 8_2:+70488040 None:intergenic
AGCCAACAAAGAAGCTGCTT+TGG 0.410602 8_2:-70485187 Msa1265870:CDS
GGAAGATTAATTTAGGAAGA+AGG 0.411065 8_2:+70488265 None:intergenic
GGAAGAAGGAGAAGAAGATT+CGG 0.418017 8_2:+70488279 None:intergenic
CAACTTTCCGGCGCGGCGGT+TGG 0.421785 8_2:-70488096 Msa1265870:CDS
TCCTCACATGCATAAGTAGA+AGG 0.433646 8_2:+70487796 None:intergenic
TTAGTCTGAAATGCTTCAAA+GGG 0.436352 8_2:+70487755 None:intergenic
GACATAAATATGACCTGCTT+GGG 0.442801 8_2:+70485132 None:intergenic
GACTTACTATTCCATCCCTC+TGG 0.443630 8_2:+70487042 None:intergenic
CGACATAAATATGACCTGCT+TGG 0.447621 8_2:+70485131 None:intergenic
GTTGTTCCAAAATGGCTATC+AGG 0.449836 8_2:-70487069 Msa1265870:CDS
CCTGGACTTCCTCCTGGTTG+TGG 0.461803 8_2:+70484652 None:intergenic
CAGTCTAACCTACCAACATT+TGG 0.463000 8_2:+70484610 None:intergenic
TTTAGTCTGAAATGCTTCAA+AGG 0.471185 8_2:+70487754 None:intergenic
TTCAAACCGCCACTACTTGT+CGG 0.475885 8_2:-70488161 Msa1265870:CDS
AATAAAGACAAATTAATGTT+CGG 0.478502 8_2:+70483841 None:intergenic
ATGAAGTAGATCCACCTTCA+AGG 0.498181 8_2:-70484114 Msa1265870:CDS
TTCATTCCATTCTAATAATG+TGG 0.499048 8_2:+70484132 None:intergenic
GATAGACCAGAAGCTTCATT+GGG 0.499403 8_2:-70487255 Msa1265870:CDS
CAAGGGGAAACAAGTACTAT+GGG 0.502340 8_2:-70485245 Msa1265870:CDS
GAGGTGGGCACCGCCCAAGC+AGG 0.503320 8_2:-70485145 Msa1265870:intron
AATTTCTCCTCCCTTGAAGG+TGG 0.505594 8_2:+70484103 None:intergenic
TCCATATCCTTCATCTTGAA+GGG 0.506275 8_2:-70488245 Msa1265870:five_prime_UTR
GTGTCTGAAAGGCGAAGACC+TGG 0.511249 8_2:+70484634 None:intergenic
CATCATGCTTTAAGGTGTGT+TGG 0.511315 8_2:+70488219 None:intergenic
TTGTGCAAATCAGTCAAAGA+TGG 0.511899 8_2:+70485369 None:intergenic
CATGCATAAGTAGAAGGAGT+TGG 0.513697 8_2:+70487802 None:intergenic
CGAAGACCTGGACTTCCTCC+TGG 0.513786 8_2:+70484646 None:intergenic
TTTCTAACAACATTCACCAT+TGG 0.514282 8_2:-70488036 Msa1265870:intron
ATTGCAGAAAACGGAGAGAT+GGG 0.521782 8_2:-70484163 Msa1265870:intron
TATTGCAGAAAACGGAGAGA+TGG 0.533665 8_2:-70484164 Msa1265870:intron
CATATAAGATTCACATACTC+CGG 0.541628 8_2:+70484022 None:intergenic
TACTCCGGATGATCAACAAA+AGG 0.542530 8_2:+70484037 None:intergenic
CCACAACCAGGAGGAAGTCC+AGG 0.543045 8_2:-70484652 Msa1265870:CDS
TGTTATGGGTTTCCACAACC+AGG 0.543802 8_2:-70484664 Msa1265870:CDS
CTGAAGCAGACAAGAGGAGG+TGG 0.545836 8_2:-70485161 Msa1265870:CDS
GGATAATCCAACCGCCGCGC+CGG 0.551390 8_2:+70488089 None:intergenic
CTTTCAGACACTCCAAATGT+TGG 0.551941 8_2:-70484622 Msa1265870:intron
CAACATTTGGAGTGTCTGAA+AGG 0.554647 8_2:+70484623 None:intergenic
ATAAATATGACCTGCTTGGG+CGG 0.571462 8_2:+70485135 None:intergenic
GAGGATTAGGACGGCTTGCA+CGG 0.571755 8_2:+70488068 None:intergenic
TCCTTCTACTTATGCATGTG+AGG 0.574535 8_2:-70487797 Msa1265870:CDS
GAACTGTTCCCGACAAGTAG+TGG 0.580457 8_2:+70488152 None:intergenic
TGAAGTAGATCCACCTTCAA+GGG 0.586411 8_2:-70484113 Msa1265870:CDS
TGCGAGGGCATTAATGTACA+TGG 0.587413 8_2:-70484692 Msa1265870:CDS
CCATATCCTTCATCTTGAAG+GGG 0.596138 8_2:-70488244 Msa1265870:five_prime_UTR
AGAAGGAGTTGGATATTCAG+AGG 0.600784 8_2:+70487813 None:intergenic
AACATGAATGACCTCTTGGT+AGG 0.607659 8_2:+70487675 None:intergenic
TGAATGATGTGGAGCAATGA+CGG 0.616592 8_2:+70487702 None:intergenic
TTGGTGCCCCTTCAAGATGA+AGG 0.626864 8_2:+70488238 None:intergenic
GGGACTCAATGGAACAAATG+TGG 0.631529 8_2:-70487924 Msa1265870:CDS
TGGACACTGAAGCAGACAAG+AGG 0.636703 8_2:-70485167 Msa1265870:CDS
TGGTAGGACAATGAATGATG+TGG 0.641618 8_2:+70487691 None:intergenic
TATCAGGAAAACCAGAGGGA+TGG 0.641822 8_2:-70487053 Msa1265870:CDS
TCATTCATTGTCCTACCAAG+AGG 0.643823 8_2:-70487686 Msa1265870:intron
AGGTTAGAGGAGATATTGCG+AGG 0.646892 8_2:-70484708 Msa1265870:CDS
ACACTGAAGCAGACAAGAGG+AGG 0.651465 8_2:-70485164 Msa1265870:CDS
TGAAGCAGACAAGAGGAGGT+GGG 0.657080 8_2:-70485160 Msa1265870:CDS
GGTTAGAGGAGATATTGCGA+GGG 0.660097 8_2:-70484707 Msa1265870:CDS
TAGTCTGAAATGCTTCAAAG+GGG 0.662090 8_2:+70487756 None:intergenic
GGGGAGTATCAAGTGACTTG+TGG 0.662339 8_2:+70488192 None:intergenic
ATGTTGTTAGAAACTGGAAA+CGG 0.664250 8_2:+70488046 None:intergenic
TTGTTAGAAACTGGAAACGG+AGG 0.667555 8_2:+70488049 None:intergenic
TGGCTATCAGGAAAACCAGA+GGG 0.668240 8_2:-70487057 Msa1265870:CDS
AGTAGATCCACCTTCAAGGG+AGG 0.669378 8_2:-70484110 Msa1265870:CDS
CTGTTCCCGACAAGTAGTGG+CGG 0.672425 8_2:+70488155 None:intergenic
GTATCAACTTTCCGGCGCGG+CGG 0.674326 8_2:-70488100 Msa1265870:CDS
CTGGAAACGGAGGATTAGGA+CGG 0.677054 8_2:+70488059 None:intergenic
CCTTACCATTAACGTCAGCA+GGG 0.678653 8_2:+70485340 None:intergenic
ATGGCTATCAGGAAAACCAG+AGG 0.697894 8_2:-70487058 Msa1265870:CDS
AAGGGGAAACAAGTACTATG+GGG 0.708705 8_2:-70485244 Msa1265870:CDS
TATGGGTTTCCACAACCAGG+AGG 0.721276 8_2:-70484661 Msa1265870:CDS
GCAGTATCAACTTTCCGGCG+CGG 0.745739 8_2:-70488103 Msa1265870:CDS
GTTGTCAGCCCATAAGAACG+AGG 0.754084 8_2:+70485396 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAAAACATATATCA+GGG + chr8_2:70487641-70487660 None:intergenic 10.0%
!! TATTATAAAAAACATATATC+AGG + chr8_2:70487642-70487661 None:intergenic 10.0%
!! ATTAAATTAAAGAATTTAGA+AGG + chr8_2:70487817-70487836 None:intergenic 10.0%
!! AATTAGAATGAGAAAAAAAA+AGG + chr8_2:70484073-70484092 None:intergenic 15.0%
!!! TACCTATTATTTCAATTTTT+AGG - chr8_2:70484132-70484151 Msa1265870:CDS 15.0%
!!! ACCTATTATTTCAATTTTTA+GGG - chr8_2:70484133-70484152 Msa1265870:CDS 15.0%
!! TAAACTGATATATAAATAAG+AGG + chr8_2:70486611-70486630 None:intergenic 15.0%
!!! ATATTGTTTTATGTTGAAAA+AGG - chr8_2:70487728-70487747 Msa1265870:CDS 15.0%
!! TTAAAAATGTGTAATGAAAA+CGG + chr8_2:70488199-70488218 None:intergenic 15.0%
!! AATAAAGACAAATTAATGTT+CGG + chr8_2:70488239-70488258 None:intergenic 15.0%
!! TCCCTAAAAATTGAAATAAT+AGG + chr8_2:70484137-70484156 None:intergenic 20.0%
!!! GATTTTGTTTTTGTAATAAC+AGG - chr8_2:70484761-70484780 Msa1265870:intron 20.0%
!! TAATTGGAATTTGTAACAAA+AGG - chr8_2:70485169-70485188 Msa1265870:CDS 20.0%
!! AATTGGAATTTGTAACAAAA+GGG - chr8_2:70485170-70485189 Msa1265870:CDS 20.0%
!! TGATAGAAATTAATAGGAAT+TGG - chr8_2:70485648-70485667 Msa1265870:intron 20.0%
!! TAGATTCAATTCTTATCAAT+TGG + chr8_2:70486468-70486487 None:intergenic 20.0%
!!! TTTTGGATAAGAACTTATAT+GGG + chr8_2:70486559-70486578 None:intergenic 20.0%
!! TGATATATAAATAAGAGGAA+AGG + chr8_2:70486606-70486625 None:intergenic 20.0%
!! TTATGTAATTGTATCTTACA+GGG - chr8_2:70486646-70486665 Msa1265870:intron 20.0%
!! TATTAATCTTGCTTCTTATT+TGG - chr8_2:70487583-70487602 Msa1265870:intron 20.0%
!! TAAATCTTTATTGCAGAAAA+CGG - chr8_2:70487905-70487924 Msa1265870:CDS 20.0%
!!! GTAAATTTTATCAGCATAAT+CGG - chr8_2:70488014-70488033 Msa1265870:intron 20.0%
!!! TAATTTTTTTTCTTCTTCGT+TGG + chr8_2:70488137-70488156 None:intergenic 20.0%
!! AACGAAGAAGAAAAAAAATT+AGG - chr8_2:70488136-70488155 Msa1265870:CDS 20.0%
! AGGATATGGAAGATTAATTT+AGG + chr8_2:70483822-70483841 None:intergenic 25.0%
!!! TAACTTGTTTTCATTTCTCA+TGG - chr8_2:70484177-70484196 Msa1265870:intron 25.0%
! AGTATGCTACAAAAAAAAAG+AGG + chr8_2:70485138-70485157 None:intergenic 25.0%
! TTAACAGTTTCTGAACTTAA+AGG - chr8_2:70485478-70485497 Msa1265870:intron 25.0%
! TTCTGAACTTAAAGGAAATT+AGG - chr8_2:70485486-70485505 Msa1265870:intron 25.0%
!! TTTTAGCGGTATTAATGTTA+AGG - chr8_2:70485586-70485605 Msa1265870:intron 25.0%
! AAGTTTACAAGTAAGAAGAA+AGG + chr8_2:70485798-70485817 None:intergenic 25.0%
!!! TTCAAAGTGAAGGTTTTTTA+GGG + chr8_2:70485875-70485894 None:intergenic 25.0%
! TTCTTATCAATTGGTATCAA+AGG + chr8_2:70486459-70486478 None:intergenic 25.0%
! TAGAAATGTAAAAAAACACC+AGG + chr8_2:70486502-70486521 None:intergenic 25.0%
! TTACATTTCTATTACATCCT+TGG - chr8_2:70486511-70486530 Msa1265870:intron 25.0%
!!! GTTTTGGATAAGAACTTATA+TGG + chr8_2:70486560-70486579 None:intergenic 25.0%
! AAATAAGAGGAAAGGAAAAT+TGG + chr8_2:70486598-70486617 None:intergenic 25.0%
! CTTATGTAATTGTATCTTAC+AGG - chr8_2:70486645-70486664 Msa1265870:intron 25.0%
! TATGTAATTGTATCTTACAG+GGG - chr8_2:70486647-70486666 Msa1265870:intron 25.0%
!! TTTTCCCAACATTACAATTT+TGG - chr8_2:70486777-70486796 Msa1265870:intron 25.0%
! TCAACCAAAATTGTAATGTT+GGG + chr8_2:70486784-70486803 None:intergenic 25.0%
! ATCAACCAAAATTGTAATGT+TGG + chr8_2:70486785-70486804 None:intergenic 25.0%
! ATGACAATCAGAAACAAAAA+TGG + chr8_2:70486973-70486992 None:intergenic 25.0%
! ATGATCAGCAATCAATTAAA+AGG + chr8_2:70487004-70487023 None:intergenic 25.0%
! TTATCTGAGCTATTATAGTT+AGG - chr8_2:70487068-70487087 Msa1265870:CDS 25.0%
! GAGATAAAATCTTAATGTCA+TGG + chr8_2:70487142-70487161 None:intergenic 25.0%
!!! ACAACTGATATTAATTTGCA+AGG + chr8_2:70487193-70487212 None:intergenic 25.0%
! ACTTGAAAAAAGAAGTAGTA+TGG + chr8_2:70487251-70487270 None:intergenic 25.0%
! CAGCAATATATTAATTGTTC+AGG + chr8_2:70487292-70487311 None:intergenic 25.0%
! GCTCAATTTACAATAATGTT+TGG - chr8_2:70487501-70487520 Msa1265870:intron 25.0%
! ACTGAAAATTAATCCAACTA+AGG + chr8_2:70487562-70487581 None:intergenic 25.0%
! CAATTTATCCATAGCAAAAA+TGG + chr8_2:70487764-70487783 None:intergenic 25.0%
! AATTGAGTATAAAATAGCTC+TGG - chr8_2:70487779-70487798 Msa1265870:CDS 25.0%
! TGAGTTTGAAAAATGATTGA+AGG - chr8_2:70487849-70487868 Msa1265870:CDS 25.0%
! GAGTTTGAAAAATGATTGAA+GGG - chr8_2:70487850-70487869 Msa1265870:CDS 25.0%
! ACTAAAAAAGTAACGAAAGT+TGG + chr8_2:70487877-70487896 None:intergenic 25.0%
! TTCATTCCATTCTAATAATG+TGG + chr8_2:70487948-70487967 None:intergenic 25.0%
! AAGAAAAAAAATTAGGACGT+GGG - chr8_2:70488143-70488162 Msa1265870:CDS 25.0%
GGAAGATTAATTTAGGAAGA+AGG + chr8_2:70483815-70483834 None:intergenic 30.0%
ATGTTGTTAGAAACTGGAAA+CGG + chr8_2:70484034-70484053 None:intergenic 30.0%
TTTCTAACAACATTCACCAT+TGG - chr8_2:70484041-70484060 Msa1265870:CDS 30.0%
GAATGAGAAAAAAAAAGGCA+CGG + chr8_2:70484068-70484087 None:intergenic 30.0%
AGCTTTACAATTGTGTTTGT+TGG + chr8_2:70484105-70484124 None:intergenic 30.0%
!! TTCAATTTTTAGGGACTCAA+TGG - chr8_2:70484142-70484161 Msa1265870:CDS 30.0%
! TTAGTCTGAAATGCTTCAAA+GGG + chr8_2:70484325-70484344 None:intergenic 30.0%
! TTTAGTCTGAAATGCTTCAA+AGG + chr8_2:70484326-70484345 None:intergenic 30.0%
! TTGAAGCATTTCAGACTAAA+AGG - chr8_2:70484326-70484345 Msa1265870:intron 30.0%
TAAAAACATGAATGACCTCT+TGG + chr8_2:70484409-70484428 None:intergenic 30.0%
! TATATATATGTTTGTTGCCG+CGG - chr8_2:70484431-70484450 Msa1265870:intron 30.0%
!! GTTATTTTCCTAAGATATCC+AGG - chr8_2:70484585-70484604 Msa1265870:intron 30.0%
!! AAGCCAGTACCATATTTTAA+GGG + chr8_2:70484724-70484743 None:intergenic 30.0%
!! TGTTTTTGTAATAACAGGTG+TGG - chr8_2:70484766-70484785 Msa1265870:intron 30.0%
! GTTTTTGTAATAACAGGTGT+GGG - chr8_2:70484767-70484786 Msa1265870:intron 30.0%
!! TTAGCTGATTTTTATATGCC+TGG - chr8_2:70484946-70484965 Msa1265870:intron 30.0%
!! ATACTTTCTCAGTTGGTAAT+TGG - chr8_2:70485153-70485172 Msa1265870:CDS 30.0%
TTTGATGAGCATGTCATTAA+TGG - chr8_2:70485206-70485225 Msa1265870:CDS 30.0%
! ATGTTCATTTTCTCATTAGC+AGG + chr8_2:70485364-70485383 None:intergenic 30.0%
! ATCTGATCAAGTTCCTTTTT+AGG - chr8_2:70485386-70485405 Msa1265870:CDS 30.0%
CAACACAAATCTTTCTACTT+TGG + chr8_2:70485417-70485436 None:intergenic 30.0%
! ATATTCTTTTGTCTTGCCTA+AGG - chr8_2:70485559-70485578 Msa1265870:intron 30.0%
AGGGAGTGATAGAAATTAAT+AGG - chr8_2:70485642-70485661 Msa1265870:intron 30.0%
!! TTTTGGAAAGGAATTTAGAG+TGG + chr8_2:70485751-70485770 None:intergenic 30.0%
!!! TCAAAGTGAAGGTTTTTTAG+GGG + chr8_2:70485874-70485893 None:intergenic 30.0%
!!! GTTCAAAGTGAAGGTTTTTT+AGG + chr8_2:70485876-70485895 None:intergenic 30.0%
GTGTAATAGGAGAGATATAA+CGG + chr8_2:70485984-70486003 None:intergenic 30.0%
AAAGTGGAACAAAGTAGAAT+TGG + chr8_2:70486024-70486043 None:intergenic 30.0%
!! TTCTAGTTTGAGATCAAGAT+GGG + chr8_2:70486177-70486196 None:intergenic 30.0%
AAAGGTCTACTATTAGAGTT+GGG + chr8_2:70486441-70486460 None:intergenic 30.0%
GAATCTAATATAGAAGAACC+TGG - chr8_2:70486481-70486500 Msa1265870:intron 30.0%
! TTCTTTTAGTGAACTCATCA+AGG - chr8_2:70486814-70486833 Msa1265870:intron 30.0%
! TCTTTTAGTGAACTCATCAA+GGG - chr8_2:70486815-70486834 Msa1265870:intron 30.0%
TAACTTATGAAGGAATTACC+AGG + chr8_2:70487051-70487070 None:intergenic 30.0%
ATAGCTCAGATAACTTATGA+AGG + chr8_2:70487061-70487080 None:intergenic 30.0%
TTATAGTTAGGCATATCAGA+TGG - chr8_2:70487080-70487099 Msa1265870:CDS 30.0%
TATAGTTAGGCATATCAGAT+GGG - chr8_2:70487081-70487100 Msa1265870:CDS 30.0%
GTTAAATGAACGTGAATTGT+TGG - chr8_2:70487211-70487230 Msa1265870:intron 30.0%
CTTGAAGTTAAAATAACCTC+AGG - chr8_2:70487349-70487368 Msa1265870:intron 30.0%
TTAAAATAACCTCAGGTTAG+AGG - chr8_2:70487356-70487375 Msa1265870:intron 30.0%
ATTATGACCTATACTTGCAA+GGG - chr8_2:70487524-70487543 Msa1265870:intron 30.0%
AACATATATCAGGGATGAAA+AGG + chr8_2:70487632-70487651 None:intergenic 30.0%
TGCTTTCCACATTATTAGAA+TGG - chr8_2:70487939-70487958 Msa1265870:intron 30.0%
CATATAAGATTCACATACTC+CGG + chr8_2:70488058-70488077 None:intergenic 30.0%
GAAGAAAAAAAATTAGGACG+TGG - chr8_2:70488142-70488161 Msa1265870:CDS 30.0%
AGAAAAAAAATTAGGACGTG+GGG - chr8_2:70488144-70488163 Msa1265870:CDS 30.0%
TTCCATATCCTTCATCTTGA+AGG - chr8_2:70483831-70483850 Msa1265870:three_prime_UTR 35.0%
TCCATATCCTTCATCTTGAA+GGG - chr8_2:70483832-70483851 Msa1265870:three_prime_UTR 35.0%
TGGTGAATGTTGTTAGAAAC+TGG + chr8_2:70484040-70484059 None:intergenic 35.0%
CTTCAAAGGGGAATAGTAAT+TGG + chr8_2:70484312-70484331 None:intergenic 35.0%
! TAGTCTGAAATGCTTCAAAG+GGG + chr8_2:70484324-70484343 None:intergenic 35.0%
!! CCATATTTTAAGGGTCTGTT+TGG + chr8_2:70484715-70484734 None:intergenic 35.0%
CCAAACAGACCCTTAAAATA+TGG - chr8_2:70484712-70484731 Msa1265870:intron 35.0%
AGACCCTTAAAATATGGTAC+TGG - chr8_2:70484718-70484737 Msa1265870:intron 35.0%
! CAAGCCAGTACCATATTTTA+AGG + chr8_2:70484725-70484744 None:intergenic 35.0%
TGTATGCATTCCACTTAACA+TGG - chr8_2:70484847-70484866 Msa1265870:intron 35.0%
AAGAAAGACACCATGTTAAG+TGG + chr8_2:70484860-70484879 None:intergenic 35.0%
TCTGCATATGATAAATCACC+AGG + chr8_2:70484967-70484986 None:intergenic 35.0%
GATGTTGCTCTTTGATTACT+TGG - chr8_2:70485091-70485110 Msa1265870:intron 35.0%
!! GGTTTTTCAGCTGTTTTGTT+TGG - chr8_2:70485112-70485131 Msa1265870:intron 35.0%
TTGTAGCATACTTTCTCAGT+TGG - chr8_2:70485146-70485165 Msa1265870:CDS 35.0%
AGCATGTCATTAATGGAGAA+TGG - chr8_2:70485213-70485232 Msa1265870:CDS 35.0%
ATGTCATTAATGGAGAATGG+TGG - chr8_2:70485216-70485235 Msa1265870:CDS 35.0%
!! CGAGTTTTATGCGATTTACA+CGG + chr8_2:70485257-70485276 None:intergenic 35.0%
GTAAATCGCATAAAACTCGA+TGG - chr8_2:70485258-70485277 Msa1265870:intron 35.0%
ATTAGCAGGTCGTCAAATAT+CGG + chr8_2:70485350-70485369 None:intergenic 35.0%
TACTTTGGCATGACCTAAAA+AGG + chr8_2:70485402-70485421 None:intergenic 35.0%
AGAGAGTAATCGCATAATTG+AGG - chr8_2:70485527-70485546 Msa1265870:intron 35.0%
!! AAACAAATCTCTGAAGTACC+TGG + chr8_2:70485726-70485745 None:intergenic 35.0%
! AGGTACTTCAGAGATTTGTT+TGG - chr8_2:70485725-70485744 Msa1265870:intron 35.0%
!!! GGTTATCTTTGGTTTTGGAA+AGG + chr8_2:70485763-70485782 None:intergenic 35.0%
AGATTAGTGAGGGTTATCTT+TGG + chr8_2:70485774-70485793 None:intergenic 35.0%
GAAGAAAGGAAGATTAGTGA+GGG + chr8_2:70485784-70485803 None:intergenic 35.0%
AGAAGAAAGGAAGATTAGTG+AGG + chr8_2:70485785-70485804 None:intergenic 35.0%
!!! GTTTTTTAGGGGGTATTCAA+GGG + chr8_2:70485863-70485882 None:intergenic 35.0%
!!! CAAAGTGAAGGTTTTTTAGG+GGG + chr8_2:70485873-70485892 None:intergenic 35.0%
CTACAAACTGTTCAAAGTGA+AGG + chr8_2:70485885-70485904 None:intergenic 35.0%
! TGTTTCAAATAATGGAGCCT+GGG + chr8_2:70485925-70485944 None:intergenic 35.0%
AAAGTCTTCCATCAACATCA+TGG + chr8_2:70485954-70485973 None:intergenic 35.0%
AGTAGAATTGGAACTATCAC+AGG + chr8_2:70486012-70486031 None:intergenic 35.0%
CAAGGAAAACATGATCAAAG+TGG + chr8_2:70486040-70486059 None:intergenic 35.0%
! CACTTTGATCATGTTTTCCT+TGG - chr8_2:70486038-70486057 Msa1265870:intron 35.0%
! TCTAGTTTGAGATCAAGATG+GGG + chr8_2:70486176-70486195 None:intergenic 35.0%
!! GTTCTAGTTTGAGATCAAGA+TGG + chr8_2:70486178-70486197 None:intergenic 35.0%
CAATGCAAATCAGTATCTAG+AGG + chr8_2:70486355-70486374 None:intergenic 35.0%
CAAAGGTCTACTATTAGAGT+TGG + chr8_2:70486442-70486461 None:intergenic 35.0%
TCCTTGGTATTCATGAAATC+TGG - chr8_2:70486527-70486546 Msa1265870:intron 35.0%
ACCAGATTTCATGAATACCA+AGG + chr8_2:70486531-70486550 None:intergenic 35.0%
TTGTGCAAATCAGTCAAAGA+TGG + chr8_2:70486711-70486730 None:intergenic 35.0%
! CTTTTAGTGAACTCATCAAG+GGG - chr8_2:70486816-70486835 Msa1265870:intron 35.0%
GACATAAATATGACCTGCTT+GGG + chr8_2:70486948-70486967 None:intergenic 35.0%
CAAGCAGGTCATATTTATGT+CGG - chr8_2:70486947-70486966 Msa1265870:intron 35.0%
CTTGAGATTCTACTGATATC+TGG - chr8_2:70487025-70487044 Msa1265870:intron 35.0%
ATAGTTAGGCATATCAGATG+GGG - chr8_2:70487082-70487101 Msa1265870:CDS 35.0%
ATCTTAATGTCATGGACAGA+TGG + chr8_2:70487134-70487153 None:intergenic 35.0%
GATTATGACCTATACTTGCA+AGG - chr8_2:70487523-70487542 Msa1265870:intron 35.0%
TTATGACCTATACTTGCAAG+GGG - chr8_2:70487525-70487544 Msa1265870:intron 35.0%
! ATTTTACCCCTTGCAAGTAT+AGG + chr8_2:70487534-70487553 None:intergenic 35.0%
GGTAAAATACATGCCTTAGT+TGG - chr8_2:70487546-70487565 Msa1265870:intron 35.0%
GTAAATTGCAACATTAGTCG+AGG + chr8_2:70487708-70487727 None:intergenic 35.0%
!! TTGCAACTCCATTTTTGCTA+TGG - chr8_2:70487753-70487772 Msa1265870:CDS 35.0%
! GAATCCTTTTGTTGATCATC+CGG - chr8_2:70488036-70488055 Msa1265870:intron 35.0%
CGGAGTATGTGAATCTTATA+TGG - chr8_2:70488056-70488075 Msa1265870:CDS 35.0%
GGAAGAAGGAGAAGAAGATT+CGG + chr8_2:70483801-70483820 None:intergenic 40.0%
CCATATCCTTCATCTTGAAG+GGG - chr8_2:70483833-70483852 Msa1265870:three_prime_UTR 40.0%
!! CATCATGCTTTAAGGTGTGT+TGG + chr8_2:70483861-70483880 None:intergenic 40.0%
GTGGTTGTCATCATGCTTTA+AGG + chr8_2:70483869-70483888 None:intergenic 40.0%
TACACGCAGTATCAACTTTC+CGG - chr8_2:70483969-70483988 Msa1265870:CDS 40.0%
TTGTTAGAAACTGGAAACGG+AGG + chr8_2:70484031-70484050 None:intergenic 40.0%
! AAAAAAAAGGCACGGACCAA+TGG + chr8_2:70484060-70484079 None:intergenic 40.0%
AGAAGGAGTTGGATATTCAG+AGG + chr8_2:70484267-70484286 None:intergenic 40.0%
CATGCATAAGTAGAAGGAGT+TGG + chr8_2:70484278-70484297 None:intergenic 40.0%
TCCTTCTACTTATGCATGTG+AGG - chr8_2:70484280-70484299 Msa1265870:intron 40.0%
TCCTCACATGCATAAGTAGA+AGG + chr8_2:70484284-70484303 None:intergenic 40.0%
TGAATGATGTGGAGCAATGA+CGG + chr8_2:70484378-70484397 None:intergenic 40.0%
TGGTAGGACAATGAATGATG+TGG + chr8_2:70484389-70484408 None:intergenic 40.0%
TCATTCATTGTCCTACCAAG+AGG - chr8_2:70484391-70484410 Msa1265870:intron 40.0%
AACATGAATGACCTCTTGGT+AGG + chr8_2:70484405-70484424 None:intergenic 40.0%
CATGACTTAAATCAAGACCG+CGG + chr8_2:70484451-70484470 None:intergenic 40.0%
CAAGTTCTCCTGGATATCTT+AGG + chr8_2:70484596-70484615 None:intergenic 40.0%
!! GTTGTTTTCACAAGTTCTCC+TGG + chr8_2:70484606-70484625 None:intergenic 40.0%
AACGTCTCTCAAACATTCCA+CGG - chr8_2:70484654-70484673 Msa1265870:CDS 40.0%
ATTTCTAACAAAAACGCCCG+TGG + chr8_2:70484674-70484693 None:intergenic 40.0%
TGATAGACCAGAAGCTTCAT+TGG - chr8_2:70484821-70484840 Msa1265870:intron 40.0%
GATAGACCAGAAGCTTCATT+GGG - chr8_2:70484822-70484841 Msa1265870:intron 40.0%
TACATTCCCAATGAAGCTTC+TGG + chr8_2:70484831-70484850 None:intergenic 40.0%
CACTGAGAGTTGTTCCAAAA+TGG - chr8_2:70485000-70485019 Msa1265870:intron 40.0%
GTTGTTCCAAAATGGCTATC+AGG - chr8_2:70485008-70485027 Msa1265870:intron 40.0%
! GGTTTTCCTGATAGCCATTT+TGG + chr8_2:70485017-70485036 None:intergenic 40.0%
GGATGGAATAGTAAGTCATC+TGG - chr8_2:70485041-70485060 Msa1265870:intron 40.0%
! GTTTTATGCGATTTACACGG+CGG + chr8_2:70485254-70485273 None:intergenic 40.0%
CATGACCAATTTGTGAAGGA+TGG + chr8_2:70485289-70485308 None:intergenic 40.0%
CATCCTTCACAAATTGGTCA+TGG - chr8_2:70485287-70485306 Msa1265870:intron 40.0%
! TTGCCTAAGGTCTCTTTTAG+CGG - chr8_2:70485572-70485591 Msa1265870:intron 40.0%
ATACCGCTAAAAGAGACCTT+AGG + chr8_2:70485578-70485597 None:intergenic 40.0%
TGAACATGTCTAGTACATCC+AGG - chr8_2:70485705-70485724 Msa1265870:intron 40.0%
!! GTGAGGGTTATCTTTGGTTT+TGG + chr8_2:70485768-70485787 None:intergenic 40.0%
!!! GGTTTTTTAGGGGGTATTCA+AGG + chr8_2:70485864-70485883 None:intergenic 40.0%
! GTTTCAAATAATGGAGCCTG+GGG + chr8_2:70485924-70485943 None:intergenic 40.0%
! GTGTTTCAAATAATGGAGCC+TGG + chr8_2:70485926-70485945 None:intergenic 40.0%
! GCTCCATTATTTGAAACACG+AGG - chr8_2:70485927-70485946 Msa1265870:intron 40.0%
GGTCCTCGTGTTTCAAATAA+TGG + chr8_2:70485933-70485952 None:intergenic 40.0%
ATCACAGGAGTCTGTGTAAT+AGG + chr8_2:70485997-70486016 None:intergenic 40.0%
AGATTTGGAAGGGACTGAAA+AGG + chr8_2:70486069-70486088 None:intergenic 40.0%
TTCTTCCACATGAGGAGATT+TGG + chr8_2:70486084-70486103 None:intergenic 40.0%
AACTCAAGTTCTTCCACATG+AGG + chr8_2:70486092-70486111 None:intergenic 40.0%
ATGTGGAAGAACTTGAGTTC+AGG - chr8_2:70486093-70486112 Msa1265870:intron 40.0%
TTAAACCCAACATCACCAAC+AGG + chr8_2:70486122-70486141 None:intergenic 40.0%
GAATATTGGGAAGGAAGAAC+GGG + chr8_2:70486148-70486167 None:intergenic 40.0%
GGAATATTGGGAAGGAAGAA+CGG + chr8_2:70486149-70486168 None:intergenic 40.0%
AGATGGGGACTTGGAATATT+GGG + chr8_2:70486161-70486180 None:intergenic 40.0%
AAGATGGGGACTTGGAATAT+TGG + chr8_2:70486162-70486181 None:intergenic 40.0%
CAACATTTGATGGAAGGGAA+GGG + chr8_2:70486397-70486416 None:intergenic 40.0%
CTTCCCTTCCATCAAATGTT+GGG - chr8_2:70486396-70486415 Msa1265870:intron 40.0%
TTCCCTTCCATCAAATGTTG+GGG - chr8_2:70486397-70486416 Msa1265870:intron 40.0%
AAATTGGCGACGGTTAACTT+TGG + chr8_2:70486582-70486601 None:intergenic 40.0%
ATCTTTGGCCTCGTTCTTAT+GGG - chr8_2:70486673-70486692 Msa1265870:intron 40.0%
TCAAGGGGAAACAAGTACTA+TGG - chr8_2:70486831-70486850 Msa1265870:intron 40.0%
CAAGGGGAAACAAGTACTAT+GGG - chr8_2:70486832-70486851 Msa1265870:intron 40.0%
AAGGGGAAACAAGTACTATG+GGG - chr8_2:70486833-70486852 Msa1265870:intron 40.0%
TACTATGGGGAATGCATAAC+TGG - chr8_2:70486846-70486865 Msa1265870:intron 40.0%
ATAAATATGACCTGCTTGGG+CGG + chr8_2:70486945-70486964 None:intergenic 40.0%
CGACATAAATATGACCTGCT+TGG + chr8_2:70486949-70486968 None:intergenic 40.0%
TAGTTAGGCATATCAGATGG+GGG - chr8_2:70487083-70487102 Msa1265870:CDS 40.0%
ATGTACATGGCAGTCTGTTA+TGG - chr8_2:70487398-70487417 Msa1265870:intron 40.0%
TGTACATGGCAGTCTGTTAT+GGG - chr8_2:70487399-70487418 Msa1265870:intron 40.0%
! CAACATTTGGAGTGTCTGAA+AGG + chr8_2:70487457-70487476 None:intergenic 40.0%
CTTTCAGACACTCCAAATGT+TGG - chr8_2:70487455-70487474 Msa1265870:intron 40.0%
CAGTCTAACCTACCAACATT+TGG + chr8_2:70487470-70487489 None:intergenic 40.0%
TATTGCAGAAAACGGAGAGA+TGG - chr8_2:70487913-70487932 Msa1265870:CDS 40.0%
ATTGCAGAAAACGGAGAGAT+GGG - chr8_2:70487914-70487933 Msa1265870:CDS 40.0%
ATGAAGTAGATCCACCTTCA+AGG - chr8_2:70487963-70487982 Msa1265870:intron 40.0%
TGAAGTAGATCCACCTTCAA+GGG - chr8_2:70487964-70487983 Msa1265870:intron 40.0%
TACTCCGGATGATCAACAAA+AGG + chr8_2:70488043-70488062 None:intergenic 40.0%
CCCCTTCAAGATGAAGGATA+TGG + chr8_2:70483836-70483855 None:intergenic 45.0%
TGGCGGTTTGAAAAAACTGC+GGG + chr8_2:70483908-70483927 None:intergenic 45.0%
GTGGCGGTTTGAAAAAACTG+CGG + chr8_2:70483909-70483928 None:intergenic 45.0%
TTCAAACCGCCACTACTTGT+CGG - chr8_2:70483916-70483935 Msa1265870:CDS 45.0%
GAAACTGGAAACGGAGGATT+AGG + chr8_2:70484025-70484044 None:intergenic 45.0%
GGGACTCAATGGAACAAATG+TGG - chr8_2:70484153-70484172 Msa1265870:CDS 45.0%
ACGTCTCTCAAACATTCCAC+GGG - chr8_2:70484655-70484674 Msa1265870:CDS 45.0%
ATGGCTATCAGGAAAACCAG+AGG - chr8_2:70485019-70485038 Msa1265870:intron 45.0%
TGGCTATCAGGAAAACCAGA+GGG - chr8_2:70485020-70485039 Msa1265870:intron 45.0%
TATCAGGAAAACCAGAGGGA+TGG - chr8_2:70485024-70485043 Msa1265870:intron 45.0%
GACTTACTATTCCATCCCTC+TGG + chr8_2:70485038-70485057 None:intergenic 45.0%
AAGTCATCTGGTCAACTCAC+TGG - chr8_2:70485053-70485072 Msa1265870:intron 45.0%
!! CGATTTACACGGCGGATTTT+TGG + chr8_2:70485246-70485265 None:intergenic 45.0%
GACCAATTTGTGAAGGATGG+CGG + chr8_2:70485286-70485305 None:intergenic 45.0%
CCTTCACAAATTGGTCATGG+CGG - chr8_2:70485290-70485309 Msa1265870:intron 45.0%
ACACACACTTACACAGAGAG+AGG - chr8_2:70485622-70485641 Msa1265870:intron 45.0%
CACACACTTACACAGAGAGA+GGG - chr8_2:70485623-70485642 Msa1265870:intron 45.0%
CTTTGAACAGTTTGTAGCCG+TGG - chr8_2:70485888-70485907 Msa1265870:intron 45.0%
!!! CCTGGGGATTTTGTTTTCCA+CGG + chr8_2:70485908-70485927 None:intergenic 45.0%
GGACTGAAAAGGACTTTCCA+AGG + chr8_2:70486058-70486077 None:intergenic 45.0%
CCACATGAGGAGATTTGGAA+GGG + chr8_2:70486079-70486098 None:intergenic 45.0%
TCCACATGAGGAGATTTGGA+AGG + chr8_2:70486080-70486099 None:intergenic 45.0%
CTTGAGTTCAGGTATCCTGT+TGG - chr8_2:70486104-70486123 Msa1265870:intron 45.0%
!! AGGTATCCTGTTGGTGATGT+TGG - chr8_2:70486113-70486132 Msa1265870:intron 45.0%
!! GGTATCCTGTTGGTGATGTT+GGG - chr8_2:70486114-70486133 Msa1265870:intron 45.0%
TTGAGATCAAGATGGGGACT+TGG + chr8_2:70486170-70486189 None:intergenic 45.0%
TTTGACCACCTCCTTCTCAA+AGG - chr8_2:70486225-70486244 Msa1265870:intron 45.0%
ATAAAGGGAGCAACCAGACA+CGG + chr8_2:70486255-70486274 None:intergenic 45.0%
TGGTTGCTCCCTTTATACCA+AGG - chr8_2:70486259-70486278 Msa1265870:intron 45.0%
! AGTGGTGGCCTTGGTATAAA+GGG + chr8_2:70486270-70486289 None:intergenic 45.0%
AGAAGCTATCATGGCTGTGA+AGG + chr8_2:70486312-70486331 None:intergenic 45.0%
AGGGAAGGGAGAATTATTGG+TGG + chr8_2:70486383-70486402 None:intergenic 45.0%
GGAAGGGAAGGGAGAATTAT+TGG + chr8_2:70486386-70486405 None:intergenic 45.0%
CCAACATTTGATGGAAGGGA+AGG + chr8_2:70486398-70486417 None:intergenic 45.0%
CCTTCCCTTCCATCAAATGT+TGG - chr8_2:70486395-70486414 Msa1265870:intron 45.0%
GACCCCAACATTTGATGGAA+GGG + chr8_2:70486402-70486421 None:intergenic 45.0%
GAAACGACCCCAACATTTGA+TGG + chr8_2:70486407-70486426 None:intergenic 45.0%
TCAAATGTTGGGGTCGTTTC+AGG - chr8_2:70486407-70486426 Msa1265870:intron 45.0%
!! GCGACGGTTAACTTTGGTTT+TGG + chr8_2:70486576-70486595 None:intergenic 45.0%
GAGGAAAGGAAAATTGGCGA+CGG + chr8_2:70486592-70486611 None:intergenic 45.0%
!! ATCTTACAGGGGAGCATCTT+TGG - chr8_2:70486658-70486677 Msa1265870:intron 45.0%
CATCTTTGGCCTCGTTCTTA+TGG - chr8_2:70486672-70486691 Msa1265870:intron 45.0%
CCTTACCATTAACGTCAGCA+GGG + chr8_2:70486740-70486759 None:intergenic 45.0%
CCTGCTGACGTTAATGGTAA+GGG - chr8_2:70486738-70486757 Msa1265870:intron 45.0%
CTGCTGACGTTAATGGTAAG+GGG - chr8_2:70486739-70486758 Msa1265870:intron 45.0%
TGCTGACGTTAATGGTAAGG+GGG - chr8_2:70486740-70486759 Msa1265870:intron 45.0%
!! GTTGGCTGGTCTAAGACATT+TGG + chr8_2:70486877-70486896 None:intergenic 45.0%
AAAGCAGCTTCTTTGTTGGC+TGG + chr8_2:70486891-70486910 None:intergenic 45.0%
AGCCAACAAAGAAGCTGCTT+TGG - chr8_2:70486890-70486909 Msa1265870:intron 45.0%
GTCCAAAGCAGCTTCTTTGT+TGG + chr8_2:70486895-70486914 None:intergenic 45.0%
GATTCTACTGATATCTGGCC+TGG - chr8_2:70487030-70487049 Msa1265870:intron 45.0%
GCAATATCTCCTCTAACCTG+AGG + chr8_2:70487368-70487387 None:intergenic 45.0%
AGGTTAGAGGAGATATTGCG+AGG - chr8_2:70487369-70487388 Msa1265870:intron 45.0%
GGTTAGAGGAGATATTGCGA+GGG - chr8_2:70487370-70487389 Msa1265870:intron 45.0%
!! TGCGAGGGCATTAATGTACA+TGG - chr8_2:70487385-70487404 Msa1265870:intron 45.0%
TGTTATGGGTTTCCACAACC+AGG - chr8_2:70487413-70487432 Msa1265870:intron 45.0%
CAGACACTCCAAATGTTGGT+AGG - chr8_2:70487459-70487478 Msa1265870:intron 45.0%
AATTTCTCCTCCCTTGAAGG+TGG + chr8_2:70487977-70487996 None:intergenic 45.0%
CTCAATTTCTCCTCCCTTGA+AGG + chr8_2:70487980-70487999 None:intergenic 45.0%
! TTGGTGCCCCTTCAAGATGA+AGG + chr8_2:70483842-70483861 None:intergenic 50.0%
!! GGGGAGTATCAAGTGACTTG+TGG + chr8_2:70483888-70483907 None:intergenic 50.0%
GGCGGTTTGAAAAAACTGCG+GGG + chr8_2:70483907-70483926 None:intergenic 50.0%
TCAAACCGCCACTACTTGTC+GGG - chr8_2:70483917-70483936 Msa1265870:CDS 50.0%
GAACTGTTCCCGACAAGTAG+TGG + chr8_2:70483928-70483947 None:intergenic 50.0%
CTGGAAACGGAGGATTAGGA+CGG + chr8_2:70484021-70484040 None:intergenic 50.0%
GGCTTGCGTTTGCTTTGCTA+AGG - chr8_2:70484739-70484758 Msa1265870:intron 50.0%
ACAGGTGTGGGATGCTCTTA+AGG - chr8_2:70484779-70484798 Msa1265870:intron 50.0%
CACCGCCATCCTTCACAAAT+TGG - chr8_2:70485281-70485300 Msa1265870:intron 50.0%
CCGCCATGACCAATTTGTGA+AGG + chr8_2:70485293-70485312 None:intergenic 50.0%
ATATCGGCCATGGCAGATTG+TGG + chr8_2:70485334-70485353 None:intergenic 50.0%
AGGTCGTCAAATATCGGCCA+TGG + chr8_2:70485344-70485363 None:intergenic 50.0%
CCGTGGAAAACAAAATCCCC+AGG - chr8_2:70485905-70485924 Msa1265870:intron 50.0%
CACGAGGACCATGATGTTGA+TGG - chr8_2:70485943-70485962 Msa1265870:intron 50.0%
CCCTTCCAAATCTCCTCATG+TGG - chr8_2:70486076-70486095 Msa1265870:intron 50.0%
GGGGACTTGGAATATTGGGA+AGG + chr8_2:70486157-70486176 None:intergenic 50.0%
! CAGTGGTGGCCTTGGTATAA+AGG + chr8_2:70486271-70486290 None:intergenic 50.0%
TTATACCAAGGCCACCACTG+AGG - chr8_2:70486271-70486290 Msa1265870:intron 50.0%
!! TGGCTGTGAAGGCATTGCAA+GGG + chr8_2:70486301-70486320 None:intergenic 50.0%
!! ATGGCTGTGAAGGCATTGCA+AGG + chr8_2:70486302-70486321 None:intergenic 50.0%
CCATGATAGCTTCTCCTCCT+CGG - chr8_2:70486318-70486337 Msa1265870:intron 50.0%
CATGATAGCTTCTCCTCCTC+GGG - chr8_2:70486319-70486338 Msa1265870:intron 50.0%
CGACCCCAACATTTGATGGA+AGG + chr8_2:70486403-70486422 None:intergenic 50.0%
GTTGTCAGCCCATAAGAACG+AGG + chr8_2:70486684-70486703 None:intergenic 50.0%
ATTCGCCCTGCTGACGTTAA+TGG - chr8_2:70486732-70486751 Msa1265870:intron 50.0%
CCCTGCTGACGTTAATGGTA+AGG - chr8_2:70486737-70486756 Msa1265870:intron 50.0%
CCCTTACCATTAACGTCAGC+AGG + chr8_2:70486741-70486760 None:intergenic 50.0%
TGGACACTGAAGCAGACAAG+AGG - chr8_2:70486910-70486929 Msa1265870:intron 50.0%
ACACTGAAGCAGACAAGAGG+AGG - chr8_2:70486913-70486932 Msa1265870:intron 50.0%
TGAAGCAGACAAGAGGAGGT+GGG - chr8_2:70486917-70486936 Msa1265870:intron 50.0%
TAGGCATATCAGATGGGGGT+TGG - chr8_2:70487087-70487106 Msa1265870:CDS 50.0%
TATGGGTTTCCACAACCAGG+AGG - chr8_2:70487416-70487435 Msa1265870:intron 50.0%
AGTAGATCCACCTTCAAGGG+AGG - chr8_2:70487967-70487986 Msa1265870:intron 50.0%
CTGTTCCCGACAAGTAGTGG+CGG + chr8_2:70483925-70483944 None:intergenic 55.0%
GCAGTATCAACTTTCCGGCG+CGG - chr8_2:70483974-70483993 Msa1265870:CDS 55.0%
GAGGATTAGGACGGCTTGCA+CGG + chr8_2:70484012-70484031 None:intergenic 55.0%
ACGTCCACCACAATCTGCCA+TGG - chr8_2:70485324-70485343 Msa1265870:intron 55.0%
! GTGCACCTTTGAGAAGGAGG+TGG + chr8_2:70486233-70486252 None:intergenic 55.0%
! ACGGTGCACCTTTGAGAAGG+AGG + chr8_2:70486236-70486255 None:intergenic 55.0%
! GACACGGTGCACCTTTGAGA+AGG + chr8_2:70486239-70486258 None:intergenic 55.0%
! TCTCAAAGGTGCACCGTGTC+TGG - chr8_2:70486239-70486258 Msa1265870:intron 55.0%
ATTGCAAGGGACTGCCTCAG+TGG + chr8_2:70486288-70486307 None:intergenic 55.0%
CCGAGGAGGAGAAGCTATCA+TGG + chr8_2:70486321-70486340 None:intergenic 55.0%
TCTCCTCCTCGGGTATTCTG+TGG - chr8_2:70486329-70486348 Msa1265870:intron 55.0%
TAGAGGCCACAGAATACCCG+AGG + chr8_2:70486338-70486357 None:intergenic 55.0%
CTGAAGCAGACAAGAGGAGG+TGG - chr8_2:70486916-70486935 Msa1265870:intron 55.0%
GTGTCTGAAAGGCGAAGACC+TGG + chr8_2:70487446-70487465 None:intergenic 55.0%
GTATCAACTTTCCGGCGCGG+CGG - chr8_2:70483977-70483996 Msa1265870:CDS 60.0%
TCGGCCATGGCAGATTGTGG+TGG + chr8_2:70485331-70485350 None:intergenic 60.0%
AGGCCACAGAATACCCGAGG+AGG + chr8_2:70486335-70486354 None:intergenic 60.0%
CCTGGACTTCCTCCTGGTTG+TGG + chr8_2:70487428-70487447 None:intergenic 60.0%
CCACAACCAGGAGGAAGTCC+AGG - chr8_2:70487425-70487444 Msa1265870:intron 60.0%
CGAAGACCTGGACTTCCTCC+TGG + chr8_2:70487434-70487453 None:intergenic 60.0%
GGATAATCCAACCGCCGCGC+CGG + chr8_2:70483991-70484010 None:intergenic 65.0%
GACTGCCTCAGTGGTGGCCT+TGG + chr8_2:70486279-70486298 None:intergenic 65.0%
GCAAGGGACTGCCTCAGTGG+TGG + chr8_2:70486285-70486304 None:intergenic 65.0%
CAACTTTCCGGCGCGGCGGT+TGG - chr8_2:70483981-70484000 Msa1265870:CDS 70.0%
! GAGGTGGGCACCGCCCAAGC+AGG - chr8_2:70486932-70486951 Msa1265870:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 70483785 70488314 70483785 ID=Msa1265870;Name=Msa1265870
chr8_2 mRNA 70483785 70488314 70483785 ID=Msa1265870-mRNA-1;Parent=Msa1265870;Name=Msa1265870-mRNA-1;_AED=0.17;_eAED=0.17;_QI=90|1|1|1|0.85|1|8|128|388
chr8_2 exon 70483785 70484178 70483785 ID=Msa1265870-mRNA-1:exon:23403;Parent=Msa1265870-mRNA-1
chr8_2 exon 70484623 70484728 70484623 ID=Msa1265870-mRNA-1:exon:23402;Parent=Msa1265870-mRNA-1
chr8_2 exon 70485146 70485276 70485146 ID=Msa1265870-mRNA-1:exon:23401;Parent=Msa1265870-mRNA-1
chr8_2 exon 70485346 70485432 70485346 ID=Msa1265870-mRNA-1:exon:23400;Parent=Msa1265870-mRNA-1
chr8_2 exon 70487049 70487113 70487049 ID=Msa1265870-mRNA-1:exon:23399;Parent=Msa1265870-mRNA-1
chr8_2 exon 70487252 70487316 70487252 ID=Msa1265870-mRNA-1:exon:23398;Parent=Msa1265870-mRNA-1
chr8_2 exon 70487687 70487945 70487687 ID=Msa1265870-mRNA-1:exon:23397;Parent=Msa1265870-mRNA-1
chr8_2 exon 70488037 70488314 70488037 ID=Msa1265870-mRNA-1:exon:23396;Parent=Msa1265870-mRNA-1
chr8_2 five_prime_UTR 70488225 70488314 70488225 ID=Msa1265870-mRNA-1:five_prime_utr;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70488037 70488224 70488037 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70487687 70487945 70487687 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70487252 70487316 70487252 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70487049 70487113 70487049 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70485346 70485432 70485346 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70485146 70485276 70485146 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70484623 70484728 70484623 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 CDS 70483913 70484178 70483913 ID=Msa1265870-mRNA-1:cds;Parent=Msa1265870-mRNA-1
chr8_2 three_prime_UTR 70483785 70483912 70483785 ID=Msa1265870-mRNA-1:three_prime_utr;Parent=Msa1265870-mRNA-1
Gene Sequence

>Msa1265870

ATGATGACAACCACAAGTCACTTGATACTCCCCGCAGTTTTTTCAAACCGCCACTACTTGTCGGGAACAGTTCAACTTCACAATCAAAATCTCATACACGCAGTATCAACTTTCCGGCGCGGCGGTTGGATTATCCGTGCAAGCCGTCCTAATCCTCCGTTTCCAGTTTCTAACAACATTCACCATTGGGACTCAATGGAACAAATGTGGCTAACTTGTTTTCATTTCTCATGGAAATGCTTGTTTTCTAGACTTGTTTCTTTTTACTTGTTATTATCTCTTAATCTTGTTGCTGTTGCCTCTGAATATCCAACTCCTTCTACTTATGCATGTGAGGATGTTGCCAATTACTATTCCCCTTTGAAGCATTTCAGACTAAAAGGTGAAAAACTCAAGAGAAAATTGAATTCCGTCATTGCTCCACATCATTCATTGTCCTACCAAGAGGTGTGGGATGCTCTTAAGGTTCTTGATGCTGCTGATATTGATAGACCAGAAGCTTCATTGGGAATAGTCGAAATATACTCACTGAGAGTTGTTCCAAAATGGCTATCAGGAAAACCAGAGGGATGGAATAGGGAGCATCTTTGGCCTCGTTCTTATGGGCTGACAACTGTTCCATCTTTGACTGATTTGCACAACATTCGCCCTGCTGACGTTAATGTGAACTCATCAAGGGGAAACAAGTACTATGGGGAATGCATAACTGGCTCGACCAAATGTCTTAGACCAGCCAACAAAGAAGCTGCTTTGGACACTGAAGCAGACAAGAGGAGGTGGGCACCGCCCAAGCAGGTTAGAGGAGATATTGCGAGGGCATTAATGTACATGGCAGTCTGTTATGGGTTTCCACAACCAGGAGGAAGTCCAGGTCTTCGCCTTTCAGACACTCCAAATGTTGAAAACGGAGAGATGGGACTGCTTTCCACATTATTAGAATGGAATGAAGTAGATCCACCTTCAAGGGAGGAGAAATTGAGAAACGAGAGAATATGTAAATTTTATCAGCATAATCGGAATCCTTTTGTTGATCATCCGGAGTATGTGAATCTTATATGGAAGCGACTTGTTTCAATGCGTGCTCATAATAATAACGATGATGATAAGAATGTCTCCAACGAAGAAGAAAAAAAATTAGGACGTGGGGCTCAATTGCTTCACTTATGA

Protein sequence

>Msa1265870

MMTTTSHLILPAVFSNRHYLSGTVQLHNQNLIHAVSTFRRGGWIIRASRPNPPFPVSNNIHHWDSMEQMWLTCFHFSWKCLFSRLVSFYLLLSLNLVAVASEYPTPSTYACEDVANYYSPLKHFRLKGEKLKRKLNSVIAPHHSLSYQEVWDALKVLDAADIDRPEASLGIVEIYSLRVVPKWLSGKPEGWNREHLWPRSYGLTTVPSLTDLHNIRPADVNVNSSRGNKYYGECITGSTKCLRPANKEAALDTEADKRRWAPPKQVRGDIARALMYMAVCYGFPQPGGSPGLRLSDTPNVENGEMGLLSTLLEWNEVDPPSREEKLRNERICKFYQHNRNPFVDHPEYVNLIWKRLVSMRAHNNNDDDKNVSNEEEKKLGRGAQLLHL*