AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1303510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303510 MtrunA17_Chr4g0071331 90.206 388 28 3 1 388 1 378 0.0 716
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 103 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTGGCCTCGTTCTTA+TGG 0.166432 8_3:+66653626 Msa1303510:CDS
ATCTTTGGCCTCGTTCTTAT+GGG 0.226475 8_3:+66653627 Msa1303510:CDS
ATTCGCCCTGCTGACGTTAA+TGG 0.233739 8_3:+66653686 Msa1303510:CDS
TTGAAGCATTTCAGACTAAA+AGG 0.234226 8_3:+66651280 Msa1303510:CDS
CTCAATTTCTCCTCCCTTGA+AGG 0.247560 8_3:-66654931 None:intergenic
AGGATATGGAAGATTAATTT+AGG 0.272587 8_3:-66650773 None:intergenic
ATCTTACAGGGGAGCATCTT+TGG 0.274682 8_3:+66653612 Msa1303510:intron
CTTCAAAGGGGAATAGTAAT+TGG 0.307261 8_3:-66651263 None:intergenic
TACACGCAGTATCAACTTTC+CGG 0.310484 8_3:+66650923 Msa1303510:CDS
ATGTACATGGCAGTCTGTTA+TGG 0.311136 8_3:+66654352 Msa1303510:CDS
GTGGTTGTCATCATGCTTTA+AGG 0.314766 8_3:-66650820 None:intergenic
CACTGAGAGTTGTTCCAAAA+TGG 0.332819 8_3:+66651954 Msa1303510:CDS
TACTATGGGGAATGCATAAC+TGG 0.334191 8_3:+66653800 Msa1303510:CDS
TCAAGGGGAAACAAGTACTA+TGG 0.338462 8_3:+66653785 Msa1303510:CDS
CGGAGTATGTGAATCTTATA+TGG 0.339164 8_3:+66655010 Msa1303510:CDS
TGTACATGGCAGTCTGTTAT+GGG 0.367519 8_3:+66654353 Msa1303510:CDS
GTCCAAAGCAGCTTCTTTGT+TGG 0.368366 8_3:-66653846 None:intergenic
TGATAGACCAGAAGCTTCAT+TGG 0.369693 8_3:+66651775 Msa1303510:CDS
CCCCTTCAAGATGAAGGATA+TGG 0.377793 8_3:-66650787 None:intergenic
TGCTTTCCACATTATTAGAA+TGG 0.377837 8_3:+66654893 Msa1303510:CDS
GTTGGCTGGTCTAAGACATT+TGG 0.386468 8_3:-66653828 None:intergenic
GAAACTGGAAACGGAGGATT+AGG 0.388918 8_3:-66650976 None:intergenic
TACATTCCCAATGAAGCTTC+TGG 0.389428 8_3:-66651782 None:intergenic
TTAAAATAACCTCAGGTTAG+AGG 0.392590 8_3:+66654310 Msa1303510:intron
TTCCATATCCTTCATCTTGA+AGG 0.393402 8_3:+66650785 Msa1303510:five_prime_UTR
ACAGGTGTGGGATGCTCTTA+AGG 0.395646 8_3:+66651733 Msa1303510:intron
TCAAACCGCCACTACTTGTC+GGG 0.402780 8_3:+66650871 Msa1303510:CDS
AAAGCAGCTTCTTTGTTGGC+TGG 0.406826 8_3:-66653842 None:intergenic
CCCTTACCATTAACGTCAGC+AGG 0.409584 8_3:-66653692 None:intergenic
TGGTGAATGTTGTTAGAAAC+TGG 0.410462 8_3:-66650991 None:intergenic
AGCCAACAAAGAAGCTGCTT+TGG 0.410602 8_3:+66653844 Msa1303510:CDS
GGAAGATTAATTTAGGAAGA+AGG 0.411065 8_3:-66650766 None:intergenic
GGAAGAAGGAGAAGAAGATT+CGG 0.418017 8_3:-66650752 None:intergenic
CAACTTTCCGGCGCGGCGGT+TGG 0.421785 8_3:+66650935 Msa1303510:CDS
TCCTCACATGCATAAGTAGA+AGG 0.433646 8_3:-66651235 None:intergenic
TTAGTCTGAAATGCTTCAAA+GGG 0.436352 8_3:-66651276 None:intergenic
GACATAAATATGACCTGCTT+GGG 0.442801 8_3:-66653899 None:intergenic
GACTTACTATTCCATCCCTC+TGG 0.443630 8_3:-66651989 None:intergenic
CGACATAAATATGACCTGCT+TGG 0.447621 8_3:-66653900 None:intergenic
GTTGTTCCAAAATGGCTATC+AGG 0.449836 8_3:+66651962 Msa1303510:CDS
CCTGGACTTCCTCCTGGTTG+TGG 0.461803 8_3:-66654379 None:intergenic
CAGTCTAACCTACCAACATT+TGG 0.463000 8_3:-66654421 None:intergenic
TTTAGTCTGAAATGCTTCAA+AGG 0.471185 8_3:-66651277 None:intergenic
TTCAAACCGCCACTACTTGT+CGG 0.475885 8_3:+66650870 Msa1303510:CDS
AATAAAGACAAATTAATGTT+CGG 0.478502 8_3:-66655190 None:intergenic
ATGAAGTAGATCCACCTTCA+AGG 0.498181 8_3:+66654917 Msa1303510:CDS
TTCATTCCATTCTAATAATG+TGG 0.499048 8_3:-66654899 None:intergenic
GATAGACCAGAAGCTTCATT+GGG 0.499403 8_3:+66651776 Msa1303510:CDS
CAAGGGGAAACAAGTACTAT+GGG 0.502340 8_3:+66653786 Msa1303510:CDS
GAGGTGGGCACCGCCCAAGC+AGG 0.503320 8_3:+66653886 Msa1303510:CDS
AATTTCTCCTCCCTTGAAGG+TGG 0.505594 8_3:-66654928 None:intergenic
TCCATATCCTTCATCTTGAA+GGG 0.506275 8_3:+66650786 Msa1303510:five_prime_UTR
GTGTCTGAAAGGCGAAGACC+TGG 0.511249 8_3:-66654397 None:intergenic
CATCATGCTTTAAGGTGTGT+TGG 0.511315 8_3:-66650812 None:intergenic
TTGTGCAAATCAGTCAAAGA+TGG 0.511899 8_3:-66653662 None:intergenic
CATGCATAAGTAGAAGGAGT+TGG 0.513697 8_3:-66651229 None:intergenic
CGAAGACCTGGACTTCCTCC+TGG 0.513786 8_3:-66654385 None:intergenic
TTTCTAACAACATTCACCAT+TGG 0.514282 8_3:+66650995 Msa1303510:CDS
ATTGCAGAAAACGGAGAGAT+GGG 0.521782 8_3:+66654868 Msa1303510:intron
TATTGCAGAAAACGGAGAGA+TGG 0.533665 8_3:+66654867 Msa1303510:intron
CATATAAGATTCACATACTC+CGG 0.541628 8_3:-66655009 None:intergenic
TACTCCGGATGATCAACAAA+AGG 0.542530 8_3:-66654994 None:intergenic
CCACAACCAGGAGGAAGTCC+AGG 0.543045 8_3:+66654379 Msa1303510:CDS
TGTTATGGGTTTCCACAACC+AGG 0.543802 8_3:+66654367 Msa1303510:CDS
CTGAAGCAGACAAGAGGAGG+TGG 0.545836 8_3:+66653870 Msa1303510:CDS
GGATAATCCAACCGCCGCGC+CGG 0.551390 8_3:-66650942 None:intergenic
CTTTCAGACACTCCAAATGT+TGG 0.551941 8_3:+66654409 Msa1303510:CDS
CAACATTTGGAGTGTCTGAA+AGG 0.554647 8_3:-66654408 None:intergenic
ATAAATATGACCTGCTTGGG+CGG 0.571462 8_3:-66653896 None:intergenic
GAGGATTAGGACGGCTTGCA+CGG 0.571755 8_3:-66650963 None:intergenic
TCCTTCTACTTATGCATGTG+AGG 0.574535 8_3:+66651234 Msa1303510:CDS
GAACTGTTCCCGACAAGTAG+TGG 0.580457 8_3:-66650879 None:intergenic
TGAAGTAGATCCACCTTCAA+GGG 0.586411 8_3:+66654918 Msa1303510:CDS
TGCGAGGGCATTAATGTACA+TGG 0.587413 8_3:+66654339 Msa1303510:CDS
CCATATCCTTCATCTTGAAG+GGG 0.596138 8_3:+66650787 Msa1303510:five_prime_UTR
AGAAGGAGTTGGATATTCAG+AGG 0.600784 8_3:-66651218 None:intergenic
AACATGAATGACCTCTTGGT+AGG 0.607659 8_3:-66651356 None:intergenic
TGAATGATGTGGAGCAATGA+CGG 0.616592 8_3:-66651329 None:intergenic
TTGGTGCCCCTTCAAGATGA+AGG 0.626864 8_3:-66650793 None:intergenic
GGGACTCAATGGAACAAATG+TGG 0.631529 8_3:+66651107 Msa1303510:intron
TGGACACTGAAGCAGACAAG+AGG 0.636703 8_3:+66653864 Msa1303510:CDS
TGGTAGGACAATGAATGATG+TGG 0.641618 8_3:-66651340 None:intergenic
TATCAGGAAAACCAGAGGGA+TGG 0.641822 8_3:+66651978 Msa1303510:CDS
TCATTCATTGTCCTACCAAG+AGG 0.643823 8_3:+66651345 Msa1303510:CDS
AGGTTAGAGGAGATATTGCG+AGG 0.646892 8_3:+66654323 Msa1303510:intron
ACACTGAAGCAGACAAGAGG+AGG 0.651465 8_3:+66653867 Msa1303510:CDS
TGAAGCAGACAAGAGGAGGT+GGG 0.657080 8_3:+66653871 Msa1303510:CDS
GGTTAGAGGAGATATTGCGA+GGG 0.660097 8_3:+66654324 Msa1303510:intron
TAGTCTGAAATGCTTCAAAG+GGG 0.662090 8_3:-66651275 None:intergenic
GGGGAGTATCAAGTGACTTG+TGG 0.662339 8_3:-66650839 None:intergenic
ATGTTGTTAGAAACTGGAAA+CGG 0.664250 8_3:-66650985 None:intergenic
TTGTTAGAAACTGGAAACGG+AGG 0.667555 8_3:-66650982 None:intergenic
TGGCTATCAGGAAAACCAGA+GGG 0.668240 8_3:+66651974 Msa1303510:CDS
AGTAGATCCACCTTCAAGGG+AGG 0.669378 8_3:+66654921 Msa1303510:CDS
CTGTTCCCGACAAGTAGTGG+CGG 0.672425 8_3:-66650876 None:intergenic
GTATCAACTTTCCGGCGCGG+CGG 0.674326 8_3:+66650931 Msa1303510:CDS
CTGGAAACGGAGGATTAGGA+CGG 0.677054 8_3:-66650972 None:intergenic
CCTTACCATTAACGTCAGCA+GGG 0.678653 8_3:-66653691 None:intergenic
ATGGCTATCAGGAAAACCAG+AGG 0.697894 8_3:+66651973 Msa1303510:CDS
AAGGGGAAACAAGTACTATG+GGG 0.708705 8_3:+66653787 Msa1303510:CDS
TATGGGTTTCCACAACCAGG+AGG 0.721276 8_3:+66654370 Msa1303510:CDS
GCAGTATCAACTTTCCGGCG+CGG 0.745739 8_3:+66650928 Msa1303510:CDS
GTTGTCAGCCCATAAGAACG+AGG 0.754084 8_3:-66653635 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAAAACATATATCA+GGG - chr8_3:66654595-66654614 None:intergenic 10.0%
!! TATTATAAAAAACATATATC+AGG - chr8_3:66654596-66654615 None:intergenic 10.0%
!! ATTAAATTAAAGAATTTAGA+AGG - chr8_3:66654771-66654790 None:intergenic 10.0%
!! AATTAGAATGAGAAAAAAAA+AGG - chr8_3:66651027-66651046 None:intergenic 15.0%
!!! TACCTATTATTTCAATTTTT+AGG + chr8_3:66651086-66651105 Msa1303510:intron 15.0%
!!! ACCTATTATTTCAATTTTTA+GGG + chr8_3:66651087-66651106 Msa1303510:intron 15.0%
!! TAAACTGATATATAAATAAG+AGG - chr8_3:66653565-66653584 None:intergenic 15.0%
!!! ATATTGTTTTATGTTGAAAA+AGG + chr8_3:66654682-66654701 Msa1303510:intron 15.0%
!! TTAAAAATGTGTAATGAAAA+CGG - chr8_3:66655153-66655172 None:intergenic 15.0%
!! AATAAAGACAAATTAATGTT+CGG - chr8_3:66655193-66655212 None:intergenic 15.0%
!! TCCCTAAAAATTGAAATAAT+AGG - chr8_3:66651091-66651110 None:intergenic 20.0%
!!! GATTTTGTTTTTGTAATAAC+AGG + chr8_3:66651715-66651734 Msa1303510:intron 20.0%
!! TAATTGGAATTTGTAACAAA+AGG + chr8_3:66652123-66652142 Msa1303510:intron 20.0%
!! AATTGGAATTTGTAACAAAA+GGG + chr8_3:66652124-66652143 Msa1303510:intron 20.0%
!! TGATAGAAATTAATAGGAAT+TGG + chr8_3:66652602-66652621 Msa1303510:intron 20.0%
!! TAGATTCAATTCTTATCAAT+TGG - chr8_3:66653422-66653441 None:intergenic 20.0%
!!! TTTTGGATAAGAACTTATAT+GGG - chr8_3:66653513-66653532 None:intergenic 20.0%
!! TGATATATAAATAAGAGGAA+AGG - chr8_3:66653560-66653579 None:intergenic 20.0%
!! TTATGTAATTGTATCTTACA+GGG + chr8_3:66653600-66653619 Msa1303510:intron 20.0%
!! TATTAATCTTGCTTCTTATT+TGG + chr8_3:66654537-66654556 Msa1303510:intron 20.0%
!! TAAATCTTTATTGCAGAAAA+CGG + chr8_3:66654859-66654878 Msa1303510:intron 20.0%
!!! GTAAATTTTATCAGCATAAT+CGG + chr8_3:66654968-66654987 Msa1303510:CDS 20.0%
!!! TAATTTTTTTTCTTCTTCGT+TGG - chr8_3:66655091-66655110 None:intergenic 20.0%
!! AACGAAGAAGAAAAAAAATT+AGG + chr8_3:66655090-66655109 Msa1303510:CDS 20.0%
! AGGATATGGAAGATTAATTT+AGG - chr8_3:66650776-66650795 None:intergenic 25.0%
!!! TAACTTGTTTTCATTTCTCA+TGG + chr8_3:66651131-66651150 Msa1303510:CDS 25.0%
! AGTATGCTACAAAAAAAAAG+AGG - chr8_3:66652092-66652111 None:intergenic 25.0%
! TTAACAGTTTCTGAACTTAA+AGG + chr8_3:66652432-66652451 Msa1303510:intron 25.0%
! TTCTGAACTTAAAGGAAATT+AGG + chr8_3:66652440-66652459 Msa1303510:intron 25.0%
!! TTTTAGCGGTATTAATGTTA+AGG + chr8_3:66652540-66652559 Msa1303510:intron 25.0%
! AAGTTTACAAGTAAGAAGAA+AGG - chr8_3:66652752-66652771 None:intergenic 25.0%
!!! TTCAAAGTGAAGGTTTTTTA+GGG - chr8_3:66652829-66652848 None:intergenic 25.0%
! TTCTTATCAATTGGTATCAA+AGG - chr8_3:66653413-66653432 None:intergenic 25.0%
! TAGAAATGTAAAAAAACACC+AGG - chr8_3:66653456-66653475 None:intergenic 25.0%
! TTACATTTCTATTACATCCT+TGG + chr8_3:66653465-66653484 Msa1303510:intron 25.0%
!!! GTTTTGGATAAGAACTTATA+TGG - chr8_3:66653514-66653533 None:intergenic 25.0%
! AAATAAGAGGAAAGGAAAAT+TGG - chr8_3:66653552-66653571 None:intergenic 25.0%
! CTTATGTAATTGTATCTTAC+AGG + chr8_3:66653599-66653618 Msa1303510:intron 25.0%
! TATGTAATTGTATCTTACAG+GGG + chr8_3:66653601-66653620 Msa1303510:intron 25.0%
!! TTTTCCCAACATTACAATTT+TGG + chr8_3:66653731-66653750 Msa1303510:intron 25.0%
! TCAACCAAAATTGTAATGTT+GGG - chr8_3:66653738-66653757 None:intergenic 25.0%
! ATCAACCAAAATTGTAATGT+TGG - chr8_3:66653739-66653758 None:intergenic 25.0%
! ATGACAATCAGAAACAAAAA+TGG - chr8_3:66653927-66653946 None:intergenic 25.0%
! ATGATCAGCAATCAATTAAA+AGG - chr8_3:66653958-66653977 None:intergenic 25.0%
! TTATCTGAGCTATTATAGTT+AGG + chr8_3:66654022-66654041 Msa1303510:intron 25.0%
! GAGATAAAATCTTAATGTCA+TGG - chr8_3:66654096-66654115 None:intergenic 25.0%
!!! ACAACTGATATTAATTTGCA+AGG - chr8_3:66654147-66654166 None:intergenic 25.0%
! ACTTGAAAAAAGAAGTAGTA+TGG - chr8_3:66654205-66654224 None:intergenic 25.0%
! CAGCAATATATTAATTGTTC+AGG - chr8_3:66654246-66654265 None:intergenic 25.0%
! GCTCAATTTACAATAATGTT+TGG + chr8_3:66654455-66654474 Msa1303510:intron 25.0%
! ACTGAAAATTAATCCAACTA+AGG - chr8_3:66654516-66654535 None:intergenic 25.0%
! CAATTTATCCATAGCAAAAA+TGG - chr8_3:66654718-66654737 None:intergenic 25.0%
! AATTGAGTATAAAATAGCTC+TGG + chr8_3:66654733-66654752 Msa1303510:intron 25.0%
! TGAGTTTGAAAAATGATTGA+AGG + chr8_3:66654803-66654822 Msa1303510:intron 25.0%
! GAGTTTGAAAAATGATTGAA+GGG + chr8_3:66654804-66654823 Msa1303510:intron 25.0%
! ACTAAAAAAGTAACGAAAGT+TGG - chr8_3:66654831-66654850 None:intergenic 25.0%
! TTCATTCCATTCTAATAATG+TGG - chr8_3:66654902-66654921 None:intergenic 25.0%
! AAGAAAAAAAATTAGGACGT+GGG + chr8_3:66655097-66655116 Msa1303510:CDS 25.0%
GGAAGATTAATTTAGGAAGA+AGG - chr8_3:66650769-66650788 None:intergenic 30.0%
ATGTTGTTAGAAACTGGAAA+CGG - chr8_3:66650988-66651007 None:intergenic 30.0%
TTTCTAACAACATTCACCAT+TGG + chr8_3:66650995-66651014 Msa1303510:CDS 30.0%
GAATGAGAAAAAAAAAGGCA+CGG - chr8_3:66651022-66651041 None:intergenic 30.0%
AGCTTTACAATTGTGTTTGT+TGG - chr8_3:66651059-66651078 None:intergenic 30.0%
!! TTCAATTTTTAGGGACTCAA+TGG + chr8_3:66651096-66651115 Msa1303510:intron 30.0%
! TTAGTCTGAAATGCTTCAAA+GGG - chr8_3:66651279-66651298 None:intergenic 30.0%
! TTTAGTCTGAAATGCTTCAA+AGG - chr8_3:66651280-66651299 None:intergenic 30.0%
! TTGAAGCATTTCAGACTAAA+AGG + chr8_3:66651280-66651299 Msa1303510:CDS 30.0%
TAAAAACATGAATGACCTCT+TGG - chr8_3:66651363-66651382 None:intergenic 30.0%
! TATATATATGTTTGTTGCCG+CGG + chr8_3:66651385-66651404 Msa1303510:intron 30.0%
!! GTTATTTTCCTAAGATATCC+AGG + chr8_3:66651539-66651558 Msa1303510:intron 30.0%
!! AAGCCAGTACCATATTTTAA+GGG - chr8_3:66651678-66651697 None:intergenic 30.0%
!! TGTTTTTGTAATAACAGGTG+TGG + chr8_3:66651720-66651739 Msa1303510:intron 30.0%
! GTTTTTGTAATAACAGGTGT+GGG + chr8_3:66651721-66651740 Msa1303510:intron 30.0%
!! TTAGCTGATTTTTATATGCC+TGG + chr8_3:66651900-66651919 Msa1303510:intron 30.0%
!! ATACTTTCTCAGTTGGTAAT+TGG + chr8_3:66652107-66652126 Msa1303510:intron 30.0%
TTTGATGAGCATGTCATTAA+TGG + chr8_3:66652160-66652179 Msa1303510:intron 30.0%
! ATGTTCATTTTCTCATTAGC+AGG - chr8_3:66652318-66652337 None:intergenic 30.0%
! ATCTGATCAAGTTCCTTTTT+AGG + chr8_3:66652340-66652359 Msa1303510:intron 30.0%
CAACACAAATCTTTCTACTT+TGG - chr8_3:66652371-66652390 None:intergenic 30.0%
! ATATTCTTTTGTCTTGCCTA+AGG + chr8_3:66652513-66652532 Msa1303510:intron 30.0%
AGGGAGTGATAGAAATTAAT+AGG + chr8_3:66652596-66652615 Msa1303510:intron 30.0%
!! TTTTGGAAAGGAATTTAGAG+TGG - chr8_3:66652705-66652724 None:intergenic 30.0%
!!! TCAAAGTGAAGGTTTTTTAG+GGG - chr8_3:66652828-66652847 None:intergenic 30.0%
!!! GTTCAAAGTGAAGGTTTTTT+AGG - chr8_3:66652830-66652849 None:intergenic 30.0%
GTGTAATAGGAGAGATATAA+CGG - chr8_3:66652938-66652957 None:intergenic 30.0%
AAAGTGGAACAAAGTAGAAT+TGG - chr8_3:66652978-66652997 None:intergenic 30.0%
!! TTCTAGTTTGAGATCAAGAT+GGG - chr8_3:66653131-66653150 None:intergenic 30.0%
AAAGGTCTACTATTAGAGTT+GGG - chr8_3:66653395-66653414 None:intergenic 30.0%
GAATCTAATATAGAAGAACC+TGG + chr8_3:66653435-66653454 Msa1303510:intron 30.0%
! TTCTTTTAGTGAACTCATCA+AGG + chr8_3:66653768-66653787 Msa1303510:intron 30.0%
! TCTTTTAGTGAACTCATCAA+GGG + chr8_3:66653769-66653788 Msa1303510:intron 30.0%
TAACTTATGAAGGAATTACC+AGG - chr8_3:66654005-66654024 None:intergenic 30.0%
ATAGCTCAGATAACTTATGA+AGG - chr8_3:66654015-66654034 None:intergenic 30.0%
TTATAGTTAGGCATATCAGA+TGG + chr8_3:66654034-66654053 Msa1303510:intron 30.0%
TATAGTTAGGCATATCAGAT+GGG + chr8_3:66654035-66654054 Msa1303510:intron 30.0%
GTTAAATGAACGTGAATTGT+TGG + chr8_3:66654165-66654184 Msa1303510:intron 30.0%
CTTGAAGTTAAAATAACCTC+AGG + chr8_3:66654303-66654322 Msa1303510:intron 30.0%
TTAAAATAACCTCAGGTTAG+AGG + chr8_3:66654310-66654329 Msa1303510:intron 30.0%
ATTATGACCTATACTTGCAA+GGG + chr8_3:66654478-66654497 Msa1303510:intron 30.0%
AACATATATCAGGGATGAAA+AGG - chr8_3:66654586-66654605 None:intergenic 30.0%
TGCTTTCCACATTATTAGAA+TGG + chr8_3:66654893-66654912 Msa1303510:CDS 30.0%
CATATAAGATTCACATACTC+CGG - chr8_3:66655012-66655031 None:intergenic 30.0%
GAAGAAAAAAAATTAGGACG+TGG + chr8_3:66655096-66655115 Msa1303510:CDS 30.0%
AGAAAAAAAATTAGGACGTG+GGG + chr8_3:66655098-66655117 Msa1303510:CDS 30.0%
TTCCATATCCTTCATCTTGA+AGG + chr8_3:66650785-66650804 Msa1303510:five_prime_UTR 35.0%
TCCATATCCTTCATCTTGAA+GGG + chr8_3:66650786-66650805 Msa1303510:five_prime_UTR 35.0%
TGGTGAATGTTGTTAGAAAC+TGG - chr8_3:66650994-66651013 None:intergenic 35.0%
CTTCAAAGGGGAATAGTAAT+TGG - chr8_3:66651266-66651285 None:intergenic 35.0%
! TAGTCTGAAATGCTTCAAAG+GGG - chr8_3:66651278-66651297 None:intergenic 35.0%
!! CCATATTTTAAGGGTCTGTT+TGG - chr8_3:66651669-66651688 None:intergenic 35.0%
CCAAACAGACCCTTAAAATA+TGG + chr8_3:66651666-66651685 Msa1303510:intron 35.0%
AGACCCTTAAAATATGGTAC+TGG + chr8_3:66651672-66651691 Msa1303510:intron 35.0%
! CAAGCCAGTACCATATTTTA+AGG - chr8_3:66651679-66651698 None:intergenic 35.0%
TGTATGCATTCCACTTAACA+TGG + chr8_3:66651801-66651820 Msa1303510:intron 35.0%
AAGAAAGACACCATGTTAAG+TGG - chr8_3:66651814-66651833 None:intergenic 35.0%
TCTGCATATGATAAATCACC+AGG - chr8_3:66651921-66651940 None:intergenic 35.0%
GATGTTGCTCTTTGATTACT+TGG + chr8_3:66652045-66652064 Msa1303510:intron 35.0%
!! GGTTTTTCAGCTGTTTTGTT+TGG + chr8_3:66652066-66652085 Msa1303510:intron 35.0%
TTGTAGCATACTTTCTCAGT+TGG + chr8_3:66652100-66652119 Msa1303510:intron 35.0%
AGCATGTCATTAATGGAGAA+TGG + chr8_3:66652167-66652186 Msa1303510:intron 35.0%
ATGTCATTAATGGAGAATGG+TGG + chr8_3:66652170-66652189 Msa1303510:intron 35.0%
!! CGAGTTTTATGCGATTTACA+CGG - chr8_3:66652211-66652230 None:intergenic 35.0%
GTAAATCGCATAAAACTCGA+TGG + chr8_3:66652212-66652231 Msa1303510:intron 35.0%
ATTAGCAGGTCGTCAAATAT+CGG - chr8_3:66652304-66652323 None:intergenic 35.0%
TACTTTGGCATGACCTAAAA+AGG - chr8_3:66652356-66652375 None:intergenic 35.0%
AGAGAGTAATCGCATAATTG+AGG + chr8_3:66652481-66652500 Msa1303510:intron 35.0%
!! AAACAAATCTCTGAAGTACC+TGG - chr8_3:66652680-66652699 None:intergenic 35.0%
! AGGTACTTCAGAGATTTGTT+TGG + chr8_3:66652679-66652698 Msa1303510:intron 35.0%
!!! GGTTATCTTTGGTTTTGGAA+AGG - chr8_3:66652717-66652736 None:intergenic 35.0%
AGATTAGTGAGGGTTATCTT+TGG - chr8_3:66652728-66652747 None:intergenic 35.0%
GAAGAAAGGAAGATTAGTGA+GGG - chr8_3:66652738-66652757 None:intergenic 35.0%
AGAAGAAAGGAAGATTAGTG+AGG - chr8_3:66652739-66652758 None:intergenic 35.0%
!!! GTTTTTTAGGGGGTATTCAA+GGG - chr8_3:66652817-66652836 None:intergenic 35.0%
!!! CAAAGTGAAGGTTTTTTAGG+GGG - chr8_3:66652827-66652846 None:intergenic 35.0%
CTACAAACTGTTCAAAGTGA+AGG - chr8_3:66652839-66652858 None:intergenic 35.0%
! TGTTTCAAATAATGGAGCCT+GGG - chr8_3:66652879-66652898 None:intergenic 35.0%
AAAGTCTTCCATCAACATCA+TGG - chr8_3:66652908-66652927 None:intergenic 35.0%
AGTAGAATTGGAACTATCAC+AGG - chr8_3:66652966-66652985 None:intergenic 35.0%
CAAGGAAAACATGATCAAAG+TGG - chr8_3:66652994-66653013 None:intergenic 35.0%
! CACTTTGATCATGTTTTCCT+TGG + chr8_3:66652992-66653011 Msa1303510:intron 35.0%
! TCTAGTTTGAGATCAAGATG+GGG - chr8_3:66653130-66653149 None:intergenic 35.0%
!! GTTCTAGTTTGAGATCAAGA+TGG - chr8_3:66653132-66653151 None:intergenic 35.0%
CAATGCAAATCAGTATCTAG+AGG - chr8_3:66653309-66653328 None:intergenic 35.0%
CAAAGGTCTACTATTAGAGT+TGG - chr8_3:66653396-66653415 None:intergenic 35.0%
TCCTTGGTATTCATGAAATC+TGG + chr8_3:66653481-66653500 Msa1303510:intron 35.0%
ACCAGATTTCATGAATACCA+AGG - chr8_3:66653485-66653504 None:intergenic 35.0%
TTGTGCAAATCAGTCAAAGA+TGG - chr8_3:66653665-66653684 None:intergenic 35.0%
! CTTTTAGTGAACTCATCAAG+GGG + chr8_3:66653770-66653789 Msa1303510:intron 35.0%
GACATAAATATGACCTGCTT+GGG - chr8_3:66653902-66653921 None:intergenic 35.0%
CAAGCAGGTCATATTTATGT+CGG + chr8_3:66653901-66653920 Msa1303510:intron 35.0%
CTTGAGATTCTACTGATATC+TGG + chr8_3:66653979-66653998 Msa1303510:intron 35.0%
ATAGTTAGGCATATCAGATG+GGG + chr8_3:66654036-66654055 Msa1303510:intron 35.0%
ATCTTAATGTCATGGACAGA+TGG - chr8_3:66654088-66654107 None:intergenic 35.0%
GATTATGACCTATACTTGCA+AGG + chr8_3:66654477-66654496 Msa1303510:intron 35.0%
TTATGACCTATACTTGCAAG+GGG + chr8_3:66654479-66654498 Msa1303510:intron 35.0%
! ATTTTACCCCTTGCAAGTAT+AGG - chr8_3:66654488-66654507 None:intergenic 35.0%
GGTAAAATACATGCCTTAGT+TGG + chr8_3:66654500-66654519 Msa1303510:intron 35.0%
GTAAATTGCAACATTAGTCG+AGG - chr8_3:66654662-66654681 None:intergenic 35.0%
!! TTGCAACTCCATTTTTGCTA+TGG + chr8_3:66654707-66654726 Msa1303510:intron 35.0%
! GAATCCTTTTGTTGATCATC+CGG + chr8_3:66654990-66655009 Msa1303510:CDS 35.0%
CGGAGTATGTGAATCTTATA+TGG + chr8_3:66655010-66655029 Msa1303510:CDS 35.0%
GGAAGAAGGAGAAGAAGATT+CGG - chr8_3:66650755-66650774 None:intergenic 40.0%
CCATATCCTTCATCTTGAAG+GGG + chr8_3:66650787-66650806 Msa1303510:five_prime_UTR 40.0%
!! CATCATGCTTTAAGGTGTGT+TGG - chr8_3:66650815-66650834 None:intergenic 40.0%
GTGGTTGTCATCATGCTTTA+AGG - chr8_3:66650823-66650842 None:intergenic 40.0%
TACACGCAGTATCAACTTTC+CGG + chr8_3:66650923-66650942 Msa1303510:CDS 40.0%
TTGTTAGAAACTGGAAACGG+AGG - chr8_3:66650985-66651004 None:intergenic 40.0%
! AAAAAAAAGGCACGGACCAA+TGG - chr8_3:66651014-66651033 None:intergenic 40.0%
AGAAGGAGTTGGATATTCAG+AGG - chr8_3:66651221-66651240 None:intergenic 40.0%
CATGCATAAGTAGAAGGAGT+TGG - chr8_3:66651232-66651251 None:intergenic 40.0%
TCCTTCTACTTATGCATGTG+AGG + chr8_3:66651234-66651253 Msa1303510:CDS 40.0%
TCCTCACATGCATAAGTAGA+AGG - chr8_3:66651238-66651257 None:intergenic 40.0%
TGAATGATGTGGAGCAATGA+CGG - chr8_3:66651332-66651351 None:intergenic 40.0%
TGGTAGGACAATGAATGATG+TGG - chr8_3:66651343-66651362 None:intergenic 40.0%
TCATTCATTGTCCTACCAAG+AGG + chr8_3:66651345-66651364 Msa1303510:CDS 40.0%
AACATGAATGACCTCTTGGT+AGG - chr8_3:66651359-66651378 None:intergenic 40.0%
CATGACTTAAATCAAGACCG+CGG - chr8_3:66651405-66651424 None:intergenic 40.0%
CAAGTTCTCCTGGATATCTT+AGG - chr8_3:66651550-66651569 None:intergenic 40.0%
!! GTTGTTTTCACAAGTTCTCC+TGG - chr8_3:66651560-66651579 None:intergenic 40.0%
AACGTCTCTCAAACATTCCA+CGG + chr8_3:66651608-66651627 Msa1303510:intron 40.0%
ATTTCTAACAAAAACGCCCG+TGG - chr8_3:66651628-66651647 None:intergenic 40.0%
TGATAGACCAGAAGCTTCAT+TGG + chr8_3:66651775-66651794 Msa1303510:CDS 40.0%
GATAGACCAGAAGCTTCATT+GGG + chr8_3:66651776-66651795 Msa1303510:CDS 40.0%
TACATTCCCAATGAAGCTTC+TGG - chr8_3:66651785-66651804 None:intergenic 40.0%
CACTGAGAGTTGTTCCAAAA+TGG + chr8_3:66651954-66651973 Msa1303510:CDS 40.0%
GTTGTTCCAAAATGGCTATC+AGG + chr8_3:66651962-66651981 Msa1303510:CDS 40.0%
! GGTTTTCCTGATAGCCATTT+TGG - chr8_3:66651971-66651990 None:intergenic 40.0%
GGATGGAATAGTAAGTCATC+TGG + chr8_3:66651995-66652014 Msa1303510:intron 40.0%
! GTTTTATGCGATTTACACGG+CGG - chr8_3:66652208-66652227 None:intergenic 40.0%
CATGACCAATTTGTGAAGGA+TGG - chr8_3:66652243-66652262 None:intergenic 40.0%
CATCCTTCACAAATTGGTCA+TGG + chr8_3:66652241-66652260 Msa1303510:intron 40.0%
! TTGCCTAAGGTCTCTTTTAG+CGG + chr8_3:66652526-66652545 Msa1303510:intron 40.0%
ATACCGCTAAAAGAGACCTT+AGG - chr8_3:66652532-66652551 None:intergenic 40.0%
TGAACATGTCTAGTACATCC+AGG + chr8_3:66652659-66652678 Msa1303510:intron 40.0%
!! GTGAGGGTTATCTTTGGTTT+TGG - chr8_3:66652722-66652741 None:intergenic 40.0%
!!! GGTTTTTTAGGGGGTATTCA+AGG - chr8_3:66652818-66652837 None:intergenic 40.0%
! GTTTCAAATAATGGAGCCTG+GGG - chr8_3:66652878-66652897 None:intergenic 40.0%
! GTGTTTCAAATAATGGAGCC+TGG - chr8_3:66652880-66652899 None:intergenic 40.0%
! GCTCCATTATTTGAAACACG+AGG + chr8_3:66652881-66652900 Msa1303510:intron 40.0%
GGTCCTCGTGTTTCAAATAA+TGG - chr8_3:66652887-66652906 None:intergenic 40.0%
ATCACAGGAGTCTGTGTAAT+AGG - chr8_3:66652951-66652970 None:intergenic 40.0%
AGATTTGGAAGGGACTGAAA+AGG - chr8_3:66653023-66653042 None:intergenic 40.0%
TTCTTCCACATGAGGAGATT+TGG - chr8_3:66653038-66653057 None:intergenic 40.0%
AACTCAAGTTCTTCCACATG+AGG - chr8_3:66653046-66653065 None:intergenic 40.0%
ATGTGGAAGAACTTGAGTTC+AGG + chr8_3:66653047-66653066 Msa1303510:intron 40.0%
TTAAACCCAACATCACCAAC+AGG - chr8_3:66653076-66653095 None:intergenic 40.0%
GAATATTGGGAAGGAAGAAC+GGG - chr8_3:66653102-66653121 None:intergenic 40.0%
GGAATATTGGGAAGGAAGAA+CGG - chr8_3:66653103-66653122 None:intergenic 40.0%
AGATGGGGACTTGGAATATT+GGG - chr8_3:66653115-66653134 None:intergenic 40.0%
AAGATGGGGACTTGGAATAT+TGG - chr8_3:66653116-66653135 None:intergenic 40.0%
CAACATTTGATGGAAGGGAA+GGG - chr8_3:66653351-66653370 None:intergenic 40.0%
CTTCCCTTCCATCAAATGTT+GGG + chr8_3:66653350-66653369 Msa1303510:intron 40.0%
TTCCCTTCCATCAAATGTTG+GGG + chr8_3:66653351-66653370 Msa1303510:intron 40.0%
AAATTGGCGACGGTTAACTT+TGG - chr8_3:66653536-66653555 None:intergenic 40.0%
ATCTTTGGCCTCGTTCTTAT+GGG + chr8_3:66653627-66653646 Msa1303510:CDS 40.0%
TCAAGGGGAAACAAGTACTA+TGG + chr8_3:66653785-66653804 Msa1303510:CDS 40.0%
CAAGGGGAAACAAGTACTAT+GGG + chr8_3:66653786-66653805 Msa1303510:CDS 40.0%
AAGGGGAAACAAGTACTATG+GGG + chr8_3:66653787-66653806 Msa1303510:CDS 40.0%
TACTATGGGGAATGCATAAC+TGG + chr8_3:66653800-66653819 Msa1303510:CDS 40.0%
ATAAATATGACCTGCTTGGG+CGG - chr8_3:66653899-66653918 None:intergenic 40.0%
CGACATAAATATGACCTGCT+TGG - chr8_3:66653903-66653922 None:intergenic 40.0%
TAGTTAGGCATATCAGATGG+GGG + chr8_3:66654037-66654056 Msa1303510:intron 40.0%
ATGTACATGGCAGTCTGTTA+TGG + chr8_3:66654352-66654371 Msa1303510:CDS 40.0%
TGTACATGGCAGTCTGTTAT+GGG + chr8_3:66654353-66654372 Msa1303510:CDS 40.0%
! CAACATTTGGAGTGTCTGAA+AGG - chr8_3:66654411-66654430 None:intergenic 40.0%
CTTTCAGACACTCCAAATGT+TGG + chr8_3:66654409-66654428 Msa1303510:CDS 40.0%
CAGTCTAACCTACCAACATT+TGG - chr8_3:66654424-66654443 None:intergenic 40.0%
TATTGCAGAAAACGGAGAGA+TGG + chr8_3:66654867-66654886 Msa1303510:intron 40.0%
ATTGCAGAAAACGGAGAGAT+GGG + chr8_3:66654868-66654887 Msa1303510:intron 40.0%
ATGAAGTAGATCCACCTTCA+AGG + chr8_3:66654917-66654936 Msa1303510:CDS 40.0%
TGAAGTAGATCCACCTTCAA+GGG + chr8_3:66654918-66654937 Msa1303510:CDS 40.0%
TACTCCGGATGATCAACAAA+AGG - chr8_3:66654997-66655016 None:intergenic 40.0%
CCCCTTCAAGATGAAGGATA+TGG - chr8_3:66650790-66650809 None:intergenic 45.0%
TGGCGGTTTGAAAAAACTGC+GGG - chr8_3:66650862-66650881 None:intergenic 45.0%
GTGGCGGTTTGAAAAAACTG+CGG - chr8_3:66650863-66650882 None:intergenic 45.0%
TTCAAACCGCCACTACTTGT+CGG + chr8_3:66650870-66650889 Msa1303510:CDS 45.0%
GAAACTGGAAACGGAGGATT+AGG - chr8_3:66650979-66650998 None:intergenic 45.0%
GGGACTCAATGGAACAAATG+TGG + chr8_3:66651107-66651126 Msa1303510:intron 45.0%
ACGTCTCTCAAACATTCCAC+GGG + chr8_3:66651609-66651628 Msa1303510:intron 45.0%
ATGGCTATCAGGAAAACCAG+AGG + chr8_3:66651973-66651992 Msa1303510:CDS 45.0%
TGGCTATCAGGAAAACCAGA+GGG + chr8_3:66651974-66651993 Msa1303510:CDS 45.0%
TATCAGGAAAACCAGAGGGA+TGG + chr8_3:66651978-66651997 Msa1303510:CDS 45.0%
GACTTACTATTCCATCCCTC+TGG - chr8_3:66651992-66652011 None:intergenic 45.0%
AAGTCATCTGGTCAACTCAC+TGG + chr8_3:66652007-66652026 Msa1303510:intron 45.0%
!! CGATTTACACGGCGGATTTT+TGG - chr8_3:66652200-66652219 None:intergenic 45.0%
GACCAATTTGTGAAGGATGG+CGG - chr8_3:66652240-66652259 None:intergenic 45.0%
CCTTCACAAATTGGTCATGG+CGG + chr8_3:66652244-66652263 Msa1303510:intron 45.0%
ACACACACTTACACAGAGAG+AGG + chr8_3:66652576-66652595 Msa1303510:intron 45.0%
CACACACTTACACAGAGAGA+GGG + chr8_3:66652577-66652596 Msa1303510:intron 45.0%
CTTTGAACAGTTTGTAGCCG+TGG + chr8_3:66652842-66652861 Msa1303510:intron 45.0%
!!! CCTGGGGATTTTGTTTTCCA+CGG - chr8_3:66652862-66652881 None:intergenic 45.0%
GGACTGAAAAGGACTTTCCA+AGG - chr8_3:66653012-66653031 None:intergenic 45.0%
CCACATGAGGAGATTTGGAA+GGG - chr8_3:66653033-66653052 None:intergenic 45.0%
TCCACATGAGGAGATTTGGA+AGG - chr8_3:66653034-66653053 None:intergenic 45.0%
CTTGAGTTCAGGTATCCTGT+TGG + chr8_3:66653058-66653077 Msa1303510:intron 45.0%
!! AGGTATCCTGTTGGTGATGT+TGG + chr8_3:66653067-66653086 Msa1303510:intron 45.0%
!! GGTATCCTGTTGGTGATGTT+GGG + chr8_3:66653068-66653087 Msa1303510:intron 45.0%
TTGAGATCAAGATGGGGACT+TGG - chr8_3:66653124-66653143 None:intergenic 45.0%
TTTGACCACCTCCTTCTCAA+AGG + chr8_3:66653179-66653198 Msa1303510:intron 45.0%
ATAAAGGGAGCAACCAGACA+CGG - chr8_3:66653209-66653228 None:intergenic 45.0%
TGGTTGCTCCCTTTATACCA+AGG + chr8_3:66653213-66653232 Msa1303510:intron 45.0%
! AGTGGTGGCCTTGGTATAAA+GGG - chr8_3:66653224-66653243 None:intergenic 45.0%
AGAAGCTATCATGGCTGTGA+AGG - chr8_3:66653266-66653285 None:intergenic 45.0%
AGGGAAGGGAGAATTATTGG+TGG - chr8_3:66653337-66653356 None:intergenic 45.0%
GGAAGGGAAGGGAGAATTAT+TGG - chr8_3:66653340-66653359 None:intergenic 45.0%
CCAACATTTGATGGAAGGGA+AGG - chr8_3:66653352-66653371 None:intergenic 45.0%
CCTTCCCTTCCATCAAATGT+TGG + chr8_3:66653349-66653368 Msa1303510:intron 45.0%
GACCCCAACATTTGATGGAA+GGG - chr8_3:66653356-66653375 None:intergenic 45.0%
GAAACGACCCCAACATTTGA+TGG - chr8_3:66653361-66653380 None:intergenic 45.0%
TCAAATGTTGGGGTCGTTTC+AGG + chr8_3:66653361-66653380 Msa1303510:intron 45.0%
!! GCGACGGTTAACTTTGGTTT+TGG - chr8_3:66653530-66653549 None:intergenic 45.0%
GAGGAAAGGAAAATTGGCGA+CGG - chr8_3:66653546-66653565 None:intergenic 45.0%
!! ATCTTACAGGGGAGCATCTT+TGG + chr8_3:66653612-66653631 Msa1303510:intron 45.0%
CATCTTTGGCCTCGTTCTTA+TGG + chr8_3:66653626-66653645 Msa1303510:CDS 45.0%
CCTTACCATTAACGTCAGCA+GGG - chr8_3:66653694-66653713 None:intergenic 45.0%
CCTGCTGACGTTAATGGTAA+GGG + chr8_3:66653692-66653711 Msa1303510:intron 45.0%
CTGCTGACGTTAATGGTAAG+GGG + chr8_3:66653693-66653712 Msa1303510:intron 45.0%
TGCTGACGTTAATGGTAAGG+GGG + chr8_3:66653694-66653713 Msa1303510:intron 45.0%
!! GTTGGCTGGTCTAAGACATT+TGG - chr8_3:66653831-66653850 None:intergenic 45.0%
AAAGCAGCTTCTTTGTTGGC+TGG - chr8_3:66653845-66653864 None:intergenic 45.0%
AGCCAACAAAGAAGCTGCTT+TGG + chr8_3:66653844-66653863 Msa1303510:CDS 45.0%
GTCCAAAGCAGCTTCTTTGT+TGG - chr8_3:66653849-66653868 None:intergenic 45.0%
GATTCTACTGATATCTGGCC+TGG + chr8_3:66653984-66654003 Msa1303510:intron 45.0%
GCAATATCTCCTCTAACCTG+AGG - chr8_3:66654322-66654341 None:intergenic 45.0%
AGGTTAGAGGAGATATTGCG+AGG + chr8_3:66654323-66654342 Msa1303510:intron 45.0%
GGTTAGAGGAGATATTGCGA+GGG + chr8_3:66654324-66654343 Msa1303510:intron 45.0%
!! TGCGAGGGCATTAATGTACA+TGG + chr8_3:66654339-66654358 Msa1303510:CDS 45.0%
TGTTATGGGTTTCCACAACC+AGG + chr8_3:66654367-66654386 Msa1303510:CDS 45.0%
CAGACACTCCAAATGTTGGT+AGG + chr8_3:66654413-66654432 Msa1303510:intron 45.0%
AATTTCTCCTCCCTTGAAGG+TGG - chr8_3:66654931-66654950 None:intergenic 45.0%
CTCAATTTCTCCTCCCTTGA+AGG - chr8_3:66654934-66654953 None:intergenic 45.0%
! TTGGTGCCCCTTCAAGATGA+AGG - chr8_3:66650796-66650815 None:intergenic 50.0%
!! GGGGAGTATCAAGTGACTTG+TGG - chr8_3:66650842-66650861 None:intergenic 50.0%
GGCGGTTTGAAAAAACTGCG+GGG - chr8_3:66650861-66650880 None:intergenic 50.0%
TCAAACCGCCACTACTTGTC+GGG + chr8_3:66650871-66650890 Msa1303510:CDS 50.0%
GAACTGTTCCCGACAAGTAG+TGG - chr8_3:66650882-66650901 None:intergenic 50.0%
CTGGAAACGGAGGATTAGGA+CGG - chr8_3:66650975-66650994 None:intergenic 50.0%
GGCTTGCGTTTGCTTTGCTA+AGG + chr8_3:66651693-66651712 Msa1303510:intron 50.0%
ACAGGTGTGGGATGCTCTTA+AGG + chr8_3:66651733-66651752 Msa1303510:intron 50.0%
CACCGCCATCCTTCACAAAT+TGG + chr8_3:66652235-66652254 Msa1303510:intron 50.0%
CCGCCATGACCAATTTGTGA+AGG - chr8_3:66652247-66652266 None:intergenic 50.0%
ATATCGGCCATGGCAGATTG+TGG - chr8_3:66652288-66652307 None:intergenic 50.0%
AGGTCGTCAAATATCGGCCA+TGG - chr8_3:66652298-66652317 None:intergenic 50.0%
CCGTGGAAAACAAAATCCCC+AGG + chr8_3:66652859-66652878 Msa1303510:intron 50.0%
CACGAGGACCATGATGTTGA+TGG + chr8_3:66652897-66652916 Msa1303510:intron 50.0%
CCCTTCCAAATCTCCTCATG+TGG + chr8_3:66653030-66653049 Msa1303510:intron 50.0%
GGGGACTTGGAATATTGGGA+AGG - chr8_3:66653111-66653130 None:intergenic 50.0%
! CAGTGGTGGCCTTGGTATAA+AGG - chr8_3:66653225-66653244 None:intergenic 50.0%
TTATACCAAGGCCACCACTG+AGG + chr8_3:66653225-66653244 Msa1303510:intron 50.0%
!! TGGCTGTGAAGGCATTGCAA+GGG - chr8_3:66653255-66653274 None:intergenic 50.0%
!! ATGGCTGTGAAGGCATTGCA+AGG - chr8_3:66653256-66653275 None:intergenic 50.0%
CCATGATAGCTTCTCCTCCT+CGG + chr8_3:66653272-66653291 Msa1303510:intron 50.0%
CATGATAGCTTCTCCTCCTC+GGG + chr8_3:66653273-66653292 Msa1303510:intron 50.0%
CGACCCCAACATTTGATGGA+AGG - chr8_3:66653357-66653376 None:intergenic 50.0%
GTTGTCAGCCCATAAGAACG+AGG - chr8_3:66653638-66653657 None:intergenic 50.0%
ATTCGCCCTGCTGACGTTAA+TGG + chr8_3:66653686-66653705 Msa1303510:CDS 50.0%
CCCTGCTGACGTTAATGGTA+AGG + chr8_3:66653691-66653710 Msa1303510:intron 50.0%
CCCTTACCATTAACGTCAGC+AGG - chr8_3:66653695-66653714 None:intergenic 50.0%
TGGACACTGAAGCAGACAAG+AGG + chr8_3:66653864-66653883 Msa1303510:CDS 50.0%
ACACTGAAGCAGACAAGAGG+AGG + chr8_3:66653867-66653886 Msa1303510:CDS 50.0%
TGAAGCAGACAAGAGGAGGT+GGG + chr8_3:66653871-66653890 Msa1303510:CDS 50.0%
TAGGCATATCAGATGGGGGT+TGG + chr8_3:66654041-66654060 Msa1303510:intron 50.0%
TATGGGTTTCCACAACCAGG+AGG + chr8_3:66654370-66654389 Msa1303510:CDS 50.0%
AGTAGATCCACCTTCAAGGG+AGG + chr8_3:66654921-66654940 Msa1303510:CDS 50.0%
CTGTTCCCGACAAGTAGTGG+CGG - chr8_3:66650879-66650898 None:intergenic 55.0%
GCAGTATCAACTTTCCGGCG+CGG + chr8_3:66650928-66650947 Msa1303510:CDS 55.0%
GAGGATTAGGACGGCTTGCA+CGG - chr8_3:66650966-66650985 None:intergenic 55.0%
ACGTCCACCACAATCTGCCA+TGG + chr8_3:66652278-66652297 Msa1303510:intron 55.0%
! GTGCACCTTTGAGAAGGAGG+TGG - chr8_3:66653187-66653206 None:intergenic 55.0%
! ACGGTGCACCTTTGAGAAGG+AGG - chr8_3:66653190-66653209 None:intergenic 55.0%
! GACACGGTGCACCTTTGAGA+AGG - chr8_3:66653193-66653212 None:intergenic 55.0%
! TCTCAAAGGTGCACCGTGTC+TGG + chr8_3:66653193-66653212 Msa1303510:intron 55.0%
ATTGCAAGGGACTGCCTCAG+TGG - chr8_3:66653242-66653261 None:intergenic 55.0%
CCGAGGAGGAGAAGCTATCA+TGG - chr8_3:66653275-66653294 None:intergenic 55.0%
TCTCCTCCTCGGGTATTCTG+TGG + chr8_3:66653283-66653302 Msa1303510:intron 55.0%
TAGAGGCCACAGAATACCCG+AGG - chr8_3:66653292-66653311 None:intergenic 55.0%
CTGAAGCAGACAAGAGGAGG+TGG + chr8_3:66653870-66653889 Msa1303510:CDS 55.0%
GTGTCTGAAAGGCGAAGACC+TGG - chr8_3:66654400-66654419 None:intergenic 55.0%
GTATCAACTTTCCGGCGCGG+CGG + chr8_3:66650931-66650950 Msa1303510:CDS 60.0%
TCGGCCATGGCAGATTGTGG+TGG - chr8_3:66652285-66652304 None:intergenic 60.0%
AGGCCACAGAATACCCGAGG+AGG - chr8_3:66653289-66653308 None:intergenic 60.0%
CCTGGACTTCCTCCTGGTTG+TGG - chr8_3:66654382-66654401 None:intergenic 60.0%
CCACAACCAGGAGGAAGTCC+AGG + chr8_3:66654379-66654398 Msa1303510:CDS 60.0%
CGAAGACCTGGACTTCCTCC+TGG - chr8_3:66654388-66654407 None:intergenic 60.0%
GGATAATCCAACCGCCGCGC+CGG - chr8_3:66650945-66650964 None:intergenic 65.0%
GACTGCCTCAGTGGTGGCCT+TGG - chr8_3:66653233-66653252 None:intergenic 65.0%
GCAAGGGACTGCCTCAGTGG+TGG - chr8_3:66653239-66653258 None:intergenic 65.0%
CAACTTTCCGGCGCGGCGGT+TGG + chr8_3:66650935-66650954 Msa1303510:CDS 70.0%
! GAGGTGGGCACCGCCCAAGC+AGG + chr8_3:66653886-66653905 Msa1303510:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 66650739 66655268 66650739 ID=Msa1303510;Name=Msa1303510
chr8_3 mRNA 66650739 66655268 66650739 ID=Msa1303510-mRNA-1;Parent=Msa1303510;Name=Msa1303510-mRNA-1;_AED=0.17;_eAED=0.17;_QI=90|1|1|1|0.85|1|8|128|388
chr8_3 exon 66650739 66651016 66650739 ID=Msa1303510-mRNA-1:exon:20222;Parent=Msa1303510-mRNA-1
chr8_3 exon 66651108 66651366 66651108 ID=Msa1303510-mRNA-1:exon:20223;Parent=Msa1303510-mRNA-1
chr8_3 exon 66651737 66651801 66651737 ID=Msa1303510-mRNA-1:exon:20224;Parent=Msa1303510-mRNA-1
chr8_3 exon 66651940 66652004 66651940 ID=Msa1303510-mRNA-1:exon:20225;Parent=Msa1303510-mRNA-1
chr8_3 exon 66653621 66653707 66653621 ID=Msa1303510-mRNA-1:exon:20226;Parent=Msa1303510-mRNA-1
chr8_3 exon 66653777 66653907 66653777 ID=Msa1303510-mRNA-1:exon:20227;Parent=Msa1303510-mRNA-1
chr8_3 exon 66654325 66654430 66654325 ID=Msa1303510-mRNA-1:exon:20228;Parent=Msa1303510-mRNA-1
chr8_3 exon 66654875 66655268 66654875 ID=Msa1303510-mRNA-1:exon:20229;Parent=Msa1303510-mRNA-1
chr8_3 five_prime_UTR 66650739 66650828 66650739 ID=Msa1303510-mRNA-1:five_prime_utr;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66650829 66651016 66650829 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66651108 66651366 66651108 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66651737 66651801 66651737 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66651940 66652004 66651940 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66653621 66653707 66653621 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66653777 66653907 66653777 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66654325 66654430 66654325 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 CDS 66654875 66655140 66654875 ID=Msa1303510-mRNA-1:cds;Parent=Msa1303510-mRNA-1
chr8_3 three_prime_UTR 66655141 66655268 66655141 ID=Msa1303510-mRNA-1:three_prime_utr;Parent=Msa1303510-mRNA-1
Gene Sequence

>Msa1303510

ATGATGACAACCACAAGTCACTTGATACTCCCCGCAGTTTTTTCAAACCGCCACTACTTGTCGGGAACAGTTCAACTTCACAATCAAAATCTCATACACGCAGTATCAACTTTCCGGCGCGGCGGTTGGATTATCCGTGCAAGCCGTCCTAATCCTCCGTTTCCAGTTTCTAACAACATTCACCATTGGGACTCAATGGAACAAATGTGGCTAACTTGTTTTCATTTCTCATGGAAATGCTTGTTTTCTAGACTTGTTTCTTTTTACTTGTTATTATCTCTTAATCTTGTTGCTGTTGCCTCTGAATATCCAACTCCTTCTACTTATGCATGTGAGGATGTTGCCAATTACTATTCCCCTTTGAAGCATTTCAGACTAAAAGGTGAAAAACTCAAGAGAAAATTGAATTCCGTCATTGCTCCACATCATTCATTGTCCTACCAAGAGGTGTGGGATGCTCTTAAGGTTCTTGATGCTGCTGATATTGATAGACCAGAAGCTTCATTGGGAATAGTCGAAATATACTCACTGAGAGTTGTTCCAAAATGGCTATCAGGAAAACCAGAGGGATGGAATAGGGAGCATCTTTGGCCTCGTTCTTATGGGCTGACAACTGTTCCATCTTTGACTGATTTGCACAACATTCGCCCTGCTGACGTTAATGTGAACTCATCAAGGGGAAACAAGTACTATGGGGAATGCATAACTGGCTCGACCAAATGTCTTAGACCAGCCAACAAAGAAGCTGCTTTGGACACTGAAGCAGACAAGAGGAGGTGGGCACCGCCCAAGCAGGTTAGAGGAGATATTGCGAGGGCATTAATGTACATGGCAGTCTGTTATGGGTTTCCACAACCAGGAGGAAGTCCAGGTCTTCGCCTTTCAGACACTCCAAATGTTGAAAACGGAGAGATGGGACTGCTTTCCACATTATTAGAATGGAATGAAGTAGATCCACCTTCAAGGGAGGAGAAATTGAGAAACGAGAGAATATGTAAATTTTATCAGCATAATCGGAATCCTTTTGTTGATCATCCGGAGTATGTGAATCTTATATGGAAGCGACTTGTTTCAATGCGTGCTCATAATAATAACGATGATGATAAGAATGTCTCCAACGAAGAAGAAAAAAAATTAGGACGTGGGGCTCAATTGCTTCACTTATGA

Protein sequence

>Msa1303510

MMTTTSHLILPAVFSNRHYLSGTVQLHNQNLIHAVSTFRRGGWIIRASRPNPPFPVSNNIHHWDSMEQMWLTCFHFSWKCLFSRLVSFYLLLSLNLVAVASEYPTPSTYACEDVANYYSPLKHFRLKGEKLKRKLNSVIAPHHSLSYQEVWDALKVLDAADIDRPEASLGIVEIYSLRVVPKWLSGKPEGWNREHLWPRSYGLTTVPSLTDLHNIRPADVNVNSSRGNKYYGECITGSTKCLRPANKEAALDTEADKRRWAPPKQVRGDIARALMYMAVCYGFPQPGGSPGLRLSDTPNVENGEMGLLSTLLEWNEVDPPSREEKLRNERICKFYQHNRNPFVDHPEYVNLIWKRLVSMRAHNNNDDDKNVSNEEEKKLGRGAQLLHL*