Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773670 | sp|F4K0J3|KN4C_ARATH | 40.079 | 504 | 205 | 16 | 1 | 448 | 803 | 1265 | 1.30e-76 | 264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773670 | G7KBM2 | 96.444 | 478 | 17 | 0 | 1 | 478 | 796 | 1273 | 0.0 | 956 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0773670 | 0.823584 | 1.280120e-53 | -8.615850e-47 |
| Msa0025160 | Msa0773670 | 0.822320 | 2.523404e-53 | -8.615850e-47 |
| Msa0025580 | Msa0773670 | 0.822730 | 2.026375e-53 | -8.615850e-47 |
| Msa0027280 | Msa0773670 | 0.814544 | 1.459590e-51 | -8.615850e-47 |
| Msa0032460 | Msa0773670 | 0.818590 | 1.810292e-52 | -8.615850e-47 |
| Msa0035140 | Msa0773670 | 0.842682 | 2.227804e-58 | -8.615850e-47 |
| Msa0042640 | Msa0773670 | 0.801764 | 7.717681e-49 | -8.615850e-47 |
| Msa0050660 | Msa0773670 | 0.808189 | 3.500341e-50 | -8.615850e-47 |
| Msa0050700 | Msa0773670 | 0.808563 | 2.912300e-50 | -8.615850e-47 |
| Msa0050790 | Msa0773670 | 0.811829 | 5.755173e-51 | -8.615850e-47 |
| Msa0054690 | Msa0773670 | 0.811195 | 7.903438e-51 | -8.615850e-47 |
| Msa0068150 | Msa0773670 | 0.820244 | 7.600768e-53 | -8.615850e-47 |
| Msa0077560 | Msa0773670 | 0.807610 | 4.646021e-50 | -8.615850e-47 |
| Msa0115550 | Msa0773670 | 0.823420 | 1.398540e-53 | -8.615850e-47 |
| Msa0606100 | Msa0773670 | 0.829366 | 5.358868e-55 | -8.615850e-47 |
| Msa0607800 | Msa0773670 | 0.806831 | 6.795018e-50 | -8.615850e-47 |
| Msa0621710 | Msa0773670 | 0.846488 | 2.105028e-59 | -8.615850e-47 |
| Msa0647050 | Msa0773670 | 0.813638 | 2.313593e-51 | -8.615850e-47 |
| Msa0657700 | Msa0773670 | 0.817304 | 3.534038e-52 | -8.615850e-47 |
| Msa0658640 | Msa0773670 | 0.811895 | 5.567957e-51 | -8.615850e-47 |
| Msa0661150 | Msa0773670 | 0.824240 | 8.985314e-54 | -8.615850e-47 |
| Msa0665620 | Msa0773670 | 0.827263 | 1.722681e-54 | -8.615850e-47 |
| Msa0666700 | Msa0773670 | 0.837020 | 6.649245e-57 | -8.615850e-47 |
| Msa0668900 | Msa0773670 | 0.803894 | 2.803408e-49 | -8.615850e-47 |
| Msa0702810 | Msa0773670 | 0.812722 | 3.675201e-51 | -8.615850e-47 |
| Msa0709440 | Msa0773670 | 0.824194 | 9.209821e-54 | -8.615850e-47 |
| Msa0714520 | Msa0773670 | 0.805241 | 1.467772e-49 | -8.615850e-47 |
| Msa0735780 | Msa0773670 | 0.800358 | 1.496319e-48 | -8.615850e-47 |
| Msa0756490 | Msa0773670 | 0.810924 | 9.049977e-51 | -8.615850e-47 |
| Msa0761670 | Msa0773670 | 0.837900 | 3.955500e-57 | -8.615850e-47 |
| Msa0773630 | Msa0773670 | 0.846844 | 1.682756e-59 | -8.615850e-47 |
| Msa0773670 | Msa0780910 | 0.803393 | 3.561008e-49 | -8.615850e-47 |
| Msa0773670 | Msa0811020 | 0.845896 | 3.050273e-59 | -8.615850e-47 |
| Msa0773670 | Msa0821160 | 0.808050 | 3.746159e-50 | -8.615850e-47 |
| Msa0773670 | Msa0824450 | 0.808285 | 3.338408e-50 | -8.615850e-47 |
| Msa0773670 | Msa0828970 | 0.820967 | 5.183950e-53 | -8.615850e-47 |
| Msa0773670 | Msa0909760 | 0.850405 | 1.734735e-60 | -8.615850e-47 |
| Msa0773670 | Msa0931590 | 0.812989 | 3.211961e-51 | -8.615850e-47 |
| Msa0773670 | Msa0966320 | 0.827317 | 1.672330e-54 | -8.615850e-47 |
| Msa0773670 | Msa0966480 | 0.830215 | 3.328765e-55 | -8.615850e-47 |
| Msa0773670 | Msa1033920 | 0.816963 | 4.217787e-52 | -8.615850e-47 |
| Msa0773670 | Msa1035220 | 0.827762 | 1.307606e-54 | -8.615850e-47 |
| Msa0773670 | Msa1042160 | 0.815237 | 1.024732e-51 | -8.615850e-47 |
| Msa0773670 | Msa1042190 | 0.818636 | 1.767422e-52 | -8.615850e-47 |
| Msa0773670 | Msa1042880 | 0.800483 | 1.411043e-48 | -8.615850e-47 |
| Msa0773670 | Msa1078880 | 0.808922 | 2.440261e-50 | -8.615850e-47 |
| Msa0773670 | Msa1078970 | 0.812568 | 3.970919e-51 | -8.615850e-47 |
| Msa0773670 | Msa1081390 | 0.819411 | 1.177801e-52 | -8.615850e-47 |
| Msa0773670 | Msa1084530 | 0.827012 | 1.979024e-54 | -8.615850e-47 |
| Msa0773670 | Msa1090140 | 0.820955 | 5.218134e-53 | -8.615850e-47 |
| Msa0773670 | Msa1116220 | 0.827788 | 1.288899e-54 | -8.615850e-47 |
| Msa0773670 | Msa1116660 | 0.838639 | 2.551442e-57 | -8.615850e-47 |
| Msa0773670 | Msa1125820 | 0.836273 | 1.030754e-56 | -8.615850e-47 |
| Msa0773670 | Msa1125990 | 0.835879 | 1.298008e-56 | -8.615850e-47 |
| Msa0773670 | Msa1132530 | 0.828376 | 9.304782e-55 | -8.615850e-47 |
| Msa0773670 | Msa1162880 | 0.834505 | 2.884036e-56 | -8.615850e-47 |
| Msa0773670 | Msa1167470 | 0.809810 | 1.574172e-50 | -8.615850e-47 |
| Msa0773670 | Msa1169190 | 0.800116 | 1.676305e-48 | -8.615850e-47 |
| Msa0773670 | Msa1171290 | 0.822898 | 1.851582e-53 | -8.615850e-47 |
| Msa0773670 | Msa1226520 | 0.814183 | 1.754021e-51 | -8.615850e-47 |
| Msa0773670 | Msa1240770 | 0.805240 | 1.468979e-49 | -8.615850e-47 |
| Msa0773670 | Msa1244240 | 0.807770 | 4.297921e-50 | -8.615850e-47 |
| Msa0773670 | Msa1254540 | 0.824529 | 7.682766e-54 | -8.615850e-47 |
| Msa0773670 | Msa1261050 | 0.803255 | 3.804334e-49 | -8.615850e-47 |
| Msa0773670 | Msa1263780 | 0.810405 | 1.171736e-50 | -8.615850e-47 |
| Msa0773670 | Msa1300460 | 0.801871 | 7.337224e-49 | -8.615850e-47 |
| Msa0773670 | Msa1339170 | 0.804203 | 2.417347e-49 | -8.615850e-47 |
| Msa0773670 | Msa1343170 | 0.817601 | 3.030673e-52 | -8.615850e-47 |
| Msa0773670 | Msa1343180 | 0.818919 | 1.524501e-52 | -8.615850e-47 |
| Msa0773670 | Msa1359690 | 0.805526 | 1.279213e-49 | -8.615850e-47 |
| Msa0773670 | Msa1364410 | 0.808549 | 2.933184e-50 | -8.615850e-47 |
| Msa0773670 | Msa1368750 | 0.818344 | 2.058627e-52 | -8.615850e-47 |
| Msa0773670 | Msa1374790 | 0.819364 | 1.207567e-52 | -8.615850e-47 |
| Msa0773670 | Msa1381180 | 0.800939 | 1.138809e-48 | -8.615850e-47 |
| Msa0773670 | Msa1409410 | 0.809837 | 1.552952e-50 | -8.615850e-47 |
| Msa0773670 | Msa1440630 | 0.809383 | 1.943984e-50 | -8.615850e-47 |
| Msa0773670 | Msa1442260 | 0.802497 | 5.455552e-49 | -8.615850e-47 |
| Msa0773670 | Msa1447170 | 0.820797 | 5.672737e-53 | -8.615850e-47 |
| Msa0773670 | Msa1450190 | 0.810641 | 1.041878e-50 | -8.615850e-47 |
| Msa0773670 | Msa1451820 | 0.819803 | 9.586696e-53 | -8.615850e-47 |
| Msa0121330 | Msa0773670 | 0.817731 | 2.831840e-52 | -8.615850e-47 |
| Msa0122330 | Msa0773670 | 0.809502 | 1.833017e-50 | -8.615850e-47 |
| Msa0140280 | Msa0773670 | 0.800126 | 1.668031e-48 | -8.615850e-47 |
| Msa0140380 | Msa0773670 | 0.801275 | 9.722039e-49 | -8.615850e-47 |
| Msa0161930 | Msa0773670 | 0.808593 | 2.869898e-50 | -8.615850e-47 |
| Msa0190570 | Msa0773670 | 0.819275 | 1.265014e-52 | -8.615850e-47 |
| Msa0200050 | Msa0773670 | 0.801362 | 9.332842e-49 | -8.615850e-47 |
| Msa0367520 | Msa0773670 | 0.815210 | 1.038693e-51 | -8.615850e-47 |
| Msa0380670 | Msa0773670 | 0.811853 | 5.687927e-51 | -8.615850e-47 |
| Msa0383000 | Msa0773670 | 0.810197 | 1.299447e-50 | -8.615850e-47 |
| Msa0389950 | Msa0773670 | 0.805486 | 1.304097e-49 | -8.615850e-47 |
| Msa0400000 | Msa0773670 | 0.803631 | 3.179765e-49 | -8.615850e-47 |
| Msa0419540 | Msa0773670 | 0.809780 | 1.597669e-50 | -8.615850e-47 |
| Msa0422050 | Msa0773670 | 0.822349 | 2.483872e-53 | -8.615850e-47 |
| Msa0430300 | Msa0773670 | 0.812727 | 3.665024e-51 | -8.615850e-47 |
| Msa0431200 | Msa0773670 | 0.804764 | 1.847196e-49 | -8.615850e-47 |
| Msa0432010 | Msa0773670 | 0.819124 | 1.368969e-52 | -8.615850e-47 |
| Msa0433150 | Msa0773670 | 0.807928 | 3.977125e-50 | -8.615850e-47 |
| Msa0481890 | Msa0773670 | 0.823390 | 1.421590e-53 | -8.615850e-47 |
| Msa0298470 | Msa0773670 | 0.808559 | 2.918771e-50 | -8.615850e-47 |
| Msa0520260 | Msa0773670 | 0.807895 | 4.043083e-50 | -8.615850e-47 |
| Msa0520870 | Msa0773670 | 0.822318 | 2.526132e-53 | -8.615850e-47 |
| Msa0524520 | Msa0773670 | 0.804220 | 2.397741e-49 | -8.615850e-47 |
| Msa0531960 | Msa0773670 | 0.829321 | 5.495603e-55 | -8.615850e-47 |
| Msa0550590 | Msa0773670 | 0.817222 | 3.687274e-52 | -8.615850e-47 |
| Msa0563740 | Msa0773670 | 0.801033 | 1.089780e-48 | -8.615850e-47 |
| Msa0563980 | Msa0773670 | 0.803088 | 4.118823e-49 | -8.615850e-47 |
| Msa0567170 | Msa0773670 | 0.817796 | 2.738724e-52 | -8.615850e-47 |
| Msa0571620 | Msa0773670 | 0.820027 | 8.519074e-53 | -8.615850e-47 |
| Msa0580200 | Msa0773670 | 0.809131 | 2.201673e-50 | -8.615850e-47 |
| Msa0580810 | Msa0773670 | 0.805199 | 1.497988e-49 | -8.615850e-47 |
| Msa0587620 | Msa0773670 | 0.806884 | 6.622014e-50 | -8.615850e-47 |
| Msa0590200 | Msa0773670 | 0.802309 | 5.965027e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773670 | MtrunA17_Chr5g0427481 | 96.444 | 478 | 17 | 0 | 1 | 478 | 796 | 1273 | 0.0 | 956 |
| Msa0773670 | MtrunA17_Chr3g0132911 | 54.958 | 353 | 122 | 11 | 1 | 339 | 334 | 663 | 9.86e-97 | 306 |
| Msa0773670 | MtrunA17_Chr3g0134191 | 51.261 | 119 | 51 | 1 | 24 | 142 | 781 | 892 | 1.27e-27 | 117 |
| Msa0773670 | MtrunA17_Chr1g0153061 | 46.667 | 120 | 57 | 1 | 23 | 142 | 779 | 891 | 8.46e-25 | 108 |
| Msa0773670 | MtrunA17_Chr4g0053211 | 45.614 | 114 | 55 | 1 | 23 | 136 | 788 | 894 | 3.31e-23 | 103 |
| Msa0773670 | MtrunA17_Chr3g0132901 | 43.704 | 135 | 64 | 7 | 248 | 370 | 345 | 479 | 1.63e-18 | 88.2 |
| Msa0773670 | MtrunA17_Chr3g0132891 | 42.105 | 133 | 65 | 7 | 250 | 370 | 135 | 267 | 1.48e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0773670 | AT5G60930.3 | 40.079 | 504 | 205 | 16 | 1 | 448 | 803 | 1265 | 1.32e-77 | 264 |
| Msa0773670 | AT5G60930.1 | 40.329 | 486 | 194 | 15 | 1 | 430 | 803 | 1248 | 6.73e-77 | 262 |
| Msa0773670 | AT5G60930.2 | 37.477 | 539 | 205 | 17 | 1 | 448 | 803 | 1300 | 2.96e-71 | 246 |
| Msa0773670 | AT5G47820.2 | 48.739 | 119 | 54 | 1 | 24 | 142 | 792 | 903 | 1.52e-26 | 114 |
| Msa0773670 | AT5G47820.1 | 48.739 | 119 | 54 | 1 | 24 | 142 | 792 | 903 | 1.52e-26 | 114 |
| Msa0773670 | AT3G50240.3 | 44.048 | 84 | 47 | 0 | 25 | 108 | 691 | 774 | 1.50e-14 | 77.0 |
| Msa0773670 | AT3G50240.1 | 44.048 | 84 | 47 | 0 | 25 | 108 | 793 | 876 | 1.88e-14 | 76.6 |
| Msa0773670 | AT3G50240.4 | 44.048 | 84 | 47 | 0 | 25 | 108 | 788 | 871 | 1.89e-14 | 76.6 |
| Msa0773670 | AT3G50240.2 | 44.048 | 84 | 47 | 0 | 25 | 108 | 793 | 876 | 2.53e-14 | 76.3 |
| Msa0773670 | AT5G33300.1 | 55.556 | 45 | 20 | 0 | 243 | 287 | 338 | 382 | 5.43e-11 | 65.1 |
Find 129 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGTTATTCTTCTCTTTCT+TGG | 0.191071 | 5_2:-48947125 | None:intergenic |
| TTGTTATTCTTCTCTTTCTT+GGG | 0.216563 | 5_2:-48947124 | None:intergenic |
| TGTTTCTGTTGAAATAATTT+TGG | 0.248111 | 5_2:-48946314 | None:intergenic |
| TATAATTAATCTCTGGCTTT+GGG | 0.256174 | 5_2:-48947219 | None:intergenic |
| GTATAATTAGAGCAATTTAA+TGG | 0.276976 | 5_2:-48947958 | None:intergenic |
| AACTGAGTGCCAGGTTAAAA+TGG | 0.288976 | 5_2:+48943261 | Msa0773670:five_prime_UTR |
| TTCCATATCCTCGGATAAAA+TGG | 0.289639 | 5_2:-48946140 | None:intergenic |
| TCAAGGTGCTGAGTTGCTTC+AGG | 0.294911 | 5_2:+48946549 | Msa0773670:CDS |
| TGATCATCAATTGAAGTTGA+TGG | 0.316995 | 5_2:+48945759 | Msa0773670:CDS |
| CTTTCTCTGGATACCCTTCA+TGG | 0.317889 | 5_2:-48947026 | None:intergenic |
| TATATCAATTCAATTTGTTT+TGG | 0.320473 | 5_2:+48947522 | Msa0773670:three_prime_UTR |
| GTGGAAGCTCATGCGGTTGC+CGG | 0.320844 | 5_2:+48946443 | Msa0773670:CDS |
| TGCTTCAGGGTGCATTTGTT+GGG | 0.321174 | 5_2:+48946563 | Msa0773670:CDS |
| TCAGAATCCATGCGAGATTC+AGG | 0.324996 | 5_2:+48945976 | Msa0773670:CDS |
| TTTATCTGCTTCGTCGCTAC+CGG | 0.340675 | 5_2:-48946509 | None:intergenic |
| ATATAATTAATCTCTGGCTT+TGG | 0.343567 | 5_2:-48947220 | None:intergenic |
| TGTTTGCACACTTTGTTTCC+CGG | 0.346112 | 5_2:-48946462 | None:intergenic |
| TTCTACAACACTAGTGTCTA+TGG | 0.354387 | 5_2:+48945295 | Msa0773670:CDS |
| ATTTCCGCCATTTCTTTCTC+TGG | 0.373585 | 5_2:-48947039 | None:intergenic |
| ACCATTCAATTTCAACTACT+TGG | 0.374615 | 5_2:-48947579 | None:intergenic |
| TTGCTTCAGGGTGCATTTGT+TGG | 0.388952 | 5_2:+48946562 | Msa0773670:CDS |
| ATGCCATTGACATATTCTTA+TGG | 0.389146 | 5_2:+48947458 | Msa0773670:three_prime_UTR |
| GCAAGATGAGTCAATCAAAA+AGG | 0.390586 | 5_2:+48947336 | Msa0773670:CDS |
| TCATTTCAGGAGGGCTGAAA+TGG | 0.409050 | 5_2:+48943325 | Msa0773670:exon |
| TGGCTATCAAATAGGAAAAT+CGG | 0.415163 | 5_2:+48946110 | Msa0773670:intron |
| ATCAAATACTATCCTTCCAT+TGG | 0.418936 | 5_2:+48947294 | Msa0773670:CDS |
| TCCAAGTAGTTGAAATTGAA+TGG | 0.420025 | 5_2:+48947578 | Msa0773670:three_prime_UTR |
| AGAAAAGCTCTCTCTGACAT+TGG | 0.422940 | 5_2:+48946616 | Msa0773670:CDS |
| GGAATTGTAGCATCAACTTC+GGG | 0.431323 | 5_2:-48947361 | None:intergenic |
| CAGCACCTTGAGTTTCTAGA+AGG | 0.432057 | 5_2:-48946537 | None:intergenic |
| GGAAGACCTATGCAAATGAT+AGG | 0.446894 | 5_2:+48947654 | Msa0773670:three_prime_UTR |
| ATCCTTGAACTTCTTGCAGC+CGG | 0.450630 | 5_2:-48945242 | None:intergenic |
| GCTGAAGCTAACACTGATCA+TGG | 0.452989 | 5_2:+48946589 | Msa0773670:CDS |
| GTGTCAATATAATTAATCTC+TGG | 0.452997 | 5_2:-48947226 | None:intergenic |
| TCTATTGAAGAGACTTGTTT+GGG | 0.454989 | 5_2:+48947485 | Msa0773670:three_prime_UTR |
| TTATCTGCTTCGTCGCTACC+GGG | 0.459412 | 5_2:-48946508 | None:intergenic |
| TGGAAGCTCATGCGGTTGCC+GGG | 0.464347 | 5_2:+48946444 | Msa0773670:CDS |
| TCGGTAGAATTAGTTGAGAA+TGG | 0.466916 | 5_2:+48947633 | Msa0773670:three_prime_UTR |
| GCTTGCAGAGCTATGGGAAT+TGG | 0.470287 | 5_2:+48946418 | Msa0773670:CDS |
| TGTTATTCTTCTCTTTCTTG+GGG | 0.471087 | 5_2:-48947123 | None:intergenic |
| GAAATGCGCTTGCAGAGCTA+TGG | 0.472543 | 5_2:+48946411 | Msa0773670:CDS |
| GGCTAAATCAAATGCCATGA+AGG | 0.473277 | 5_2:+48947012 | Msa0773670:intron |
| GTCTATTGAAGAGACTTGTT+TGG | 0.475816 | 5_2:+48947484 | Msa0773670:three_prime_UTR |
| CAAGGTGCTGAGTTGCTTCA+GGG | 0.476773 | 5_2:+48946550 | Msa0773670:CDS |
| TCAATCTAGCTTCTTCCTCT+AGG | 0.480392 | 5_2:+48945426 | Msa0773670:CDS |
| ACCAGCTTGCGTAAGTCATA+AGG | 0.481531 | 5_2:-48946018 | None:intergenic |
| GTTATCAGAGGCAGAAGAGC+GGG | 0.484869 | 5_2:+48945325 | Msa0773670:CDS |
| CTCCGGCTGCAAGAAGTTCA+AGG | 0.488383 | 5_2:+48945240 | Msa0773670:CDS |
| TCTTGGCATCAGCGAGGGAC+CGG | 0.489482 | 5_2:-48945385 | None:intergenic |
| GTTCACTTGAACAGTTGAAA+AGG | 0.494939 | 5_2:+48945722 | Msa0773670:CDS |
| AGAATTTATCTGCAGAGATA+AGG | 0.495317 | 5_2:+48945654 | Msa0773670:CDS |
| TAGTGAAGCAAATGTATATG+AGG | 0.496262 | 5_2:+48947147 | Msa0773670:CDS |
| CGAGATTCAGGATATTATGT+TGG | 0.499161 | 5_2:+48945988 | Msa0773670:CDS |
| TCTTTATTATGTGATTGTCA+TGG | 0.502021 | 5_2:+48947895 | Msa0773670:intron |
| GATGCTGAATCAGATGAGTA+TGG | 0.502785 | 5_2:+48946169 | Msa0773670:CDS |
| TTCAACTCACGTTGATCTCT+AGG | 0.502867 | 5_2:-48947918 | None:intergenic |
| CAGAGGCAGAAGAGCGGGAA+CGG | 0.505256 | 5_2:+48945330 | Msa0773670:CDS |
| TGGAATTGTAGCATCAACTT+CGG | 0.507392 | 5_2:-48947362 | None:intergenic |
| ATCTGATATTTCCATATCCT+CGG | 0.507665 | 5_2:-48946149 | None:intergenic |
| TTCTGTAACAAGAACTATTG+AGG | 0.508403 | 5_2:-48947062 | None:intergenic |
| GACCTATGCAAATGATAGGC+AGG | 0.508716 | 5_2:+48947658 | Msa0773670:three_prime_UTR |
| CACTAGTGTTGTAGAAGAAG+TGG | 0.511493 | 5_2:-48945288 | None:intergenic |
| TTGAACAGTTGAAAAGGCAG+AGG | 0.514370 | 5_2:+48945728 | Msa0773670:CDS |
| TCAAATACTATCCTTCCATT+GGG | 0.515885 | 5_2:+48947295 | Msa0773670:CDS |
| GAGATGCAACTAATGATGAA+TGG | 0.516165 | 5_2:+48946194 | Msa0773670:CDS |
| AGAGGCAGAAGAGCGGGAAC+GGG | 0.520761 | 5_2:+48945331 | Msa0773670:CDS |
| TGGAACGATAACTATTACCA+GGG | 0.522975 | 5_2:-48947559 | None:intergenic |
| ATAATTAATCTCTGGCTTTG+GGG | 0.524135 | 5_2:-48947218 | None:intergenic |
| TGATCAGTGTTAGCTTCAGC+AGG | 0.524295 | 5_2:-48946586 | None:intergenic |
| CAGTGATGTATCAATGTCTC+CGG | 0.525920 | 5_2:+48945223 | Msa0773670:intron |
| AGGCGGCGAACATTCAAACT+TGG | 0.527232 | 5_2:+48946258 | Msa0773670:CDS |
| GATTCAGGATATTATGTTGG+AGG | 0.531887 | 5_2:+48945991 | Msa0773670:CDS |
| TTGGAACGATAACTATTACC+AGG | 0.532063 | 5_2:-48947560 | None:intergenic |
| TCCTTATGACTTACGCAAGC+TGG | 0.533843 | 5_2:+48946017 | Msa0773670:CDS |
| AGATGCAACTAATGATGAAT+GGG | 0.537587 | 5_2:+48946195 | Msa0773670:CDS |
| CCAGGTTAAAATGGCTATGG+AGG | 0.544917 | 5_2:+48943270 | Msa0773670:five_prime_UTR |
| CTAGCATTCTTGTCTCCCAA+TGG | 0.545255 | 5_2:-48947310 | None:intergenic |
| CACCTTGAGTTTCTAGAAGG+CGG | 0.545799 | 5_2:-48946534 | None:intergenic |
| AAATGCGCTTGCAGAGCTAT+GGG | 0.546049 | 5_2:+48946412 | Msa0773670:CDS |
| GTGCCAGGTTAAAATGGCTA+TGG | 0.546256 | 5_2:+48943267 | Msa0773670:five_prime_UTR |
| CCTCCATCTTCATCGCAGCC+AGG | 0.546585 | 5_2:+48947088 | Msa0773670:CDS |
| TGTCTGCAAAATTGCACGGC+AGG | 0.546814 | 5_2:+48946221 | Msa0773670:CDS |
| AAATGGCTAAGGAGAGTGCC+AGG | 0.548019 | 5_2:+48943342 | Msa0773670:exon |
| CACTTGAGAAAGAGAACAGT+GGG | 0.550599 | 5_2:+48947401 | Msa0773670:CDS |
| ATACCTGGCTGCGATGAAGA+TGG | 0.553480 | 5_2:-48947091 | None:intergenic |
| TCACCATAAGAATATGTCAA+TGG | 0.553821 | 5_2:-48947461 | None:intergenic |
| ATTTGAATTCTTCTCATAGT+CGG | 0.554573 | 5_2:+48947614 | Msa0773670:three_prime_UTR |
| AAAACAGAAAACTGAGTGCC+AGG | 0.557759 | 5_2:+48943252 | None:intergenic |
| TAAATTCTTGGCATCAGCGA+GGG | 0.565455 | 5_2:-48945390 | None:intergenic |
| AAGGACGCTGGAATCAAGTC+CGG | 0.571066 | 5_2:+48945366 | Msa0773670:CDS |
| GGCAGGAAAAGAAAATCTAA+AGG | 0.571096 | 5_2:+48946238 | Msa0773670:CDS |
| CCACGGGCCATGCAAAAGCA+AGG | 0.574400 | 5_2:+48947268 | Msa0773670:CDS |
| CTCTGACATTGGAAATACAC+TGG | 0.575179 | 5_2:+48946627 | Msa0773670:CDS |
| CAGGAGGGCTGAAATGGCTA+AGG | 0.577257 | 5_2:+48943331 | Msa0773670:exon |
| GTTATTCTTCTCTTTCTTGG+GGG | 0.577423 | 5_2:-48947122 | None:intergenic |
| ATAATATCCTGAATCTCGCA+TGG | 0.578434 | 5_2:-48945983 | None:intergenic |
| AGAGCTATGGGAATTGGTTG+TGG | 0.580927 | 5_2:+48946424 | Msa0773670:CDS |
| GGAGGGACTGTAAATGATCC+CGG | 0.581683 | 5_2:+48946490 | Msa0773670:CDS |
| AGGGTATCCAGAGAAAGAAA+TGG | 0.584501 | 5_2:+48947032 | Msa0773670:CDS |
| TAATTAATCTCTGGCTTTGG+GGG | 0.587416 | 5_2:-48947217 | None:intergenic |
| TGATGAAGCTAAACAATACA+AGG | 0.592909 | 5_2:+48943384 | Msa0773670:CDS |
| CATTCTTGTCTCCCAATGGA+AGG | 0.597623 | 5_2:-48947306 | None:intergenic |
| AAGTGTGCAAACAGAGAAGG+AGG | 0.599970 | 5_2:+48946472 | Msa0773670:CDS |
| CTGAAGCTAACACTGATCAT+GGG | 0.602658 | 5_2:+48946590 | Msa0773670:CDS |
| CAGTTGAAAAGGCAGAGGGA+TGG | 0.603556 | 5_2:+48945733 | Msa0773670:CDS |
| ACAAAGTGTGCAAACAGAGA+AGG | 0.604520 | 5_2:+48946469 | Msa0773670:CDS |
| GGCTGCGATGAAGATGGAGG+CGG | 0.605195 | 5_2:-48947085 | None:intergenic |
| ATTGGTTGTGGAAGCTCATG+CGG | 0.613528 | 5_2:+48946436 | Msa0773670:CDS |
| AATCCCTTTGAAAATACCAC+GGG | 0.619765 | 5_2:+48947252 | Msa0773670:CDS |
| GCTAAATCAAATGCCATGAA+GGG | 0.619881 | 5_2:+48947013 | Msa0773670:CDS |
| ATTTCAACAGAAACACCAGA+TGG | 0.622747 | 5_2:+48946322 | Msa0773670:CDS |
| TTTCACTATTCATTTCAGGA+GGG | 0.630769 | 5_2:+48943316 | Msa0773670:five_prime_UTR |
| CAGGTTAAAATGGCTATGGA+GGG | 0.633317 | 5_2:+48943271 | Msa0773670:five_prime_UTR |
| AAATCCCTTTGAAAATACCA+CGG | 0.638028 | 5_2:+48947251 | Msa0773670:CDS |
| AGCCTGCCTATCATTTGCAT+AGG | 0.639335 | 5_2:-48947660 | None:intergenic |
| CCTGGCTGCGATGAAGATGG+AGG | 0.645585 | 5_2:-48947088 | None:intergenic |
| CACGGGCCATGCAAAAGCAA+GGG | 0.651128 | 5_2:+48947269 | Msa0773670:CDS |
| GTAATGTCTGCAAAATTGCA+CGG | 0.652379 | 5_2:+48946217 | Msa0773670:CDS |
| TGAACAGTTGAAAAGGCAGA+GGG | 0.652521 | 5_2:+48945729 | Msa0773670:CDS |
| AACCGCCTTCTAGAAACTCA+AGG | 0.665575 | 5_2:+48946532 | Msa0773670:CDS |
| AGTTATCAGAGGCAGAAGAG+CGG | 0.665609 | 5_2:+48945324 | Msa0773670:CDS |
| TATGGCATCTCAGTTATCAG+AGG | 0.671698 | 5_2:+48945313 | Msa0773670:CDS |
| GTATCCAGAGAAAGAAATGG+CGG | 0.697495 | 5_2:+48947035 | Msa0773670:CDS |
| TTAAATTCTTGGCATCAGCG+AGG | 0.697896 | 5_2:-48945391 | None:intergenic |
| AGGAAAAGAAAATCTAAAGG+CGG | 0.700870 | 5_2:+48946241 | Msa0773670:CDS |
| GCTGAATCAGATGAGTATGG+TGG | 0.708165 | 5_2:+48946172 | Msa0773670:CDS |
| ACACTTGAGAAAGAGAACAG+TGG | 0.716434 | 5_2:+48947400 | Msa0773670:CDS |
| TATCTGCAGAGATAAGGACA+TGG | 0.719637 | 5_2:+48945660 | Msa0773670:CDS |
| AGTGTGCAAACAGAGAAGGA+GGG | 0.735653 | 5_2:+48946473 | Msa0773670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAAATAAAAATTA+TGG | + | chr5_2:48943888-48943907 | Msa0773670:intron | 0.0% |
| !!! | GAATTTTTTTTTAAAAATTC+TGG | + | chr5_2:48943936-48943955 | Msa0773670:intron | 10.0% |
| !! | GAAAAATAATTGAAAAAATA+CGG | + | chr5_2:48944011-48944030 | Msa0773670:intron | 10.0% |
| !! | GAAAAAAAATTTAAAAATTC+AGG | + | chr5_2:48944033-48944052 | Msa0773670:intron | 10.0% |
| !!! | ATTTTCATTAATATTTTTTC+CGG | - | chr5_2:48944400-48944419 | None:intergenic | 10.0% |
| !!! | ATTCTGAAAAAATAAAATTT+TGG | - | chr5_2:48944693-48944712 | None:intergenic | 10.0% |
| !! | AAAATTGAAAAAAAAAATTC+TGG | - | chr5_2:48944768-48944787 | None:intergenic | 10.0% |
| !!! | TTATTTAGAATATTAAAAAG+GGG | - | chr5_2:48945819-48945838 | None:intergenic | 10.0% |
| !!! | TCTTATTTAATTTAGATTAG+AGG | + | chr5_2:48943659-48943678 | Msa0773670:intron | 15.0% |
| !!! | AGAAAGAGATATTTTTTTTA+GGG | - | chr5_2:48943754-48943773 | None:intergenic | 15.0% |
| !!! | AAGAAAGAGATATTTTTTTT+AGG | - | chr5_2:48943755-48943774 | None:intergenic | 15.0% |
| !! | TAAAAAAAATATCTCTTTCT+TGG | + | chr5_2:48943754-48943773 | Msa0773670:intron | 15.0% |
| !! | GAAAAATTGAAAAAAAATTC+TGG | + | chr5_2:48943965-48943984 | Msa0773670:intron | 15.0% |
| !! | TTAAAAATTTCGAAAATATC+TGG | + | chr5_2:48944143-48944162 | Msa0773670:intron | 15.0% |
| !! | ATTGAAAAAATTGAAAATTC+TGG | + | chr5_2:48944192-48944211 | Msa0773670:intron | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | + | chr5_2:48944246-48944265 | Msa0773670:intron | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAC+CGG | + | chr5_2:48944271-48944290 | Msa0773670:intron | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | - | chr5_2:48944246-48944265 | None:intergenic | 15.0% |
| !!! | TTTTCATTAATATTTTTTCC+GGG | - | chr5_2:48944399-48944418 | None:intergenic | 15.0% |
| !!! | TAAAAATTCTGAAAAAATTC+TGG | - | chr5_2:48944590-48944609 | None:intergenic | 15.0% |
| !!! | TAAAAAAAATATCTCTTTTC+TGG | - | chr5_2:48945020-48945039 | None:intergenic | 15.0% |
| !!! | AGAAAAGAGATATTTTTTTT+AGG | + | chr5_2:48945019-48945038 | Msa0773670:intron | 15.0% |
| !!! | GAAAAGAGATATTTTTTTTA+GGG | + | chr5_2:48945020-48945039 | Msa0773670:intron | 15.0% |
| !!! | AAAAGAGATATTTTTTTTAG+GGG | + | chr5_2:48945021-48945040 | Msa0773670:intron | 15.0% |
| !! | ACGCATAATATAAATAAATA+AGG | + | chr5_2:48945090-48945109 | Msa0773670:intron | 15.0% |
| !! | TTTAGTTACATATAGAAAAA+AGG | - | chr5_2:48945176-48945195 | None:intergenic | 15.0% |
| !!! | TATTTTACTTTTTTTTTTCC+AGG | + | chr5_2:48945614-48945633 | Msa0773670:intron | 15.0% |
| !!! | GAAAATTTGTTACTTAAATT+TGG | - | chr5_2:48945897-48945916 | None:intergenic | 15.0% |
| !! | ATAAAGTTGTAAAAATAGTA+TGG | - | chr5_2:48945943-48945962 | None:intergenic | 15.0% |
| !! | AATAAAAACGTAAATAATGA+TGG | - | chr5_2:48946069-48946088 | None:intergenic | 15.0% |
| !!! | TTATTTACGTTTTTATTTTG+TGG | + | chr5_2:48946072-48946091 | Msa0773670:intron | 15.0% |
| !!! | ATTTTTTTATCAAGCATTAT+CGG | + | chr5_2:48946893-48946912 | Msa0773670:intron | 15.0% |
| !!! | TATATCAATTCAATTTGTTT+TGG | + | chr5_2:48947522-48947541 | Msa0773670:three_prime_UTR | 15.0% |
| !! | AATCACATAATAAAGAAAAT+AGG | - | chr5_2:48947891-48947910 | None:intergenic | 15.0% |
| !!! | TAAAGACTTAATTACACTTT+TGG | + | chr5_2:48943695-48943714 | Msa0773670:intron | 20.0% |
| !!! | AAAGAGATATTTTTTTTAGG+GGG | - | chr5_2:48945022-48945041 | None:intergenic | 20.0% |
| !!! | GAAAGAGATATTTTTTTTAG+GGG | - | chr5_2:48943753-48943772 | None:intergenic | 20.0% |
| !! | ATATCTGGAAAATTTGAAAA+CGG | + | chr5_2:48944158-48944177 | Msa0773670:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | + | chr5_2:48944247-48944266 | Msa0773670:intron | 20.0% |
| !! | TATAAATACACAAAAATTCC+CGG | - | chr5_2:48944268-48944287 | None:intergenic | 20.0% |
| !! | ACAAAAAATTATGTGTATTC+CGG | - | chr5_2:48944293-48944312 | None:intergenic | 20.0% |
| !! | ACAAAAAATTATGTGTATTC+TGG | - | chr5_2:48944293-48944312 | None:intergenic | 20.0% |
| !!! | ACACATAATTTTTTGTAAAC+CGG | + | chr5_2:48944331-48944350 | Msa0773670:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | - | chr5_2:48944247-48944266 | None:intergenic | 20.0% |
| !!! | AATACTAATGAAAATTTTCC+CGG | + | chr5_2:48944378-48944397 | Msa0773670:intron | 20.0% |
| !! | ATAAAATAAATTTACACACG+TGG | + | chr5_2:48944920-48944939 | Msa0773670:intron | 20.0% |
| !!! | AAAGAGATATTTTTTTTAGG+GGG | + | chr5_2:48945022-48945041 | Msa0773670:intron | 20.0% |
| !! | CAAAAAGTTCATTAAATTCT+TGG | - | chr5_2:48945405-48945424 | None:intergenic | 20.0% |
| !! | TGATTAAAGTTTAACCAATA+TGG | + | chr5_2:48945481-48945500 | Msa0773670:intron | 20.0% |
| !!! | AACAACTTTTTAAACCATAT+TGG | - | chr5_2:48945498-48945517 | None:intergenic | 20.0% |
| !!! | TTTGTTACTTAAATTTGGAA+AGG | - | chr5_2:48945892-48945911 | None:intergenic | 20.0% |
| !!! | TGTTTCTGTTGAAATAATTT+TGG | - | chr5_2:48946317-48946336 | None:intergenic | 20.0% |
| !!! | GCTATTGATTGAAATTAAAA+TGG | + | chr5_2:48946754-48946773 | Msa0773670:intron | 20.0% |
| !!! | TTTTACTCAAGATTTTATGA+TGG | + | chr5_2:48947435-48947454 | Msa0773670:three_prime_UTR | 20.0% |
| !! | GTATAATTAGAGCAATTTAA+TGG | - | chr5_2:48947961-48947980 | None:intergenic | 20.0% |
| !! | TCATTTTCACTATTCATTTC+AGG | + | chr5_2:48943312-48943331 | Msa0773670:five_prime_UTR | 25.0% |
| ! | ACATAAGATAACATACTCTT+AGG | - | chr5_2:48943617-48943636 | None:intergenic | 25.0% |
| !! | TTTAATTTAGATTAGAGGTC+TGG | + | chr5_2:48943664-48943683 | Msa0773670:intron | 25.0% |
| !! | TCACAACTTTTACATACTTA+GGG | - | chr5_2:48943723-48943742 | None:intergenic | 25.0% |
| !! | ATCACAACTTTTACATACTT+AGG | - | chr5_2:48943724-48943743 | None:intergenic | 25.0% |
| !! | GTATGTAAAAGTTGTGATTT+TGG | + | chr5_2:48943726-48943745 | Msa0773670:intron | 25.0% |
| ! | AAAATTTGAAAACGGTATTC+TGG | + | chr5_2:48944166-48944185 | Msa0773670:intron | 25.0% |
| !! | ATTATGCGTAATTACACTTT+TGG | - | chr5_2:48945079-48945098 | None:intergenic | 25.0% |
| !! | CTGCTAAATTCAAGTTATAA+GGG | - | chr5_2:48945206-48945225 | None:intergenic | 25.0% |
| !! | ACTGCTAAATTCAAGTTATA+AGG | - | chr5_2:48945207-48945226 | None:intergenic | 25.0% |
| ! | GGTTAAACTTTAATCAACTA+CGG | - | chr5_2:48945477-48945496 | None:intergenic | 25.0% |
| ! | TGAACTACTTAAGATTTGAT+AGG | - | chr5_2:48945550-48945569 | None:intergenic | 25.0% |
| ! | ATTAAAAAGGGGACAAAATA+TGG | - | chr5_2:48945808-48945827 | None:intergenic | 25.0% |
| !! | ACAACTTTATAATTTTGCAG+AGG | + | chr5_2:48945953-48945972 | Msa0773670:intron | 25.0% |
| ! | TGATGGAATGAAATATTTCT+TGG | - | chr5_2:48946052-48946071 | None:intergenic | 25.0% |
| ! | GACATTGAAAATGAAAAAGA+GGG | - | chr5_2:48946658-48946677 | None:intergenic | 25.0% |
| ! | AGACATTGAAAATGAAAAAG+AGG | - | chr5_2:48946659-48946678 | None:intergenic | 25.0% |
| ! | TAAAATGGAATTTCTTCACT+TGG | + | chr5_2:48946769-48946788 | Msa0773670:intron | 25.0% |
| !! | TTGTTATTCTTCTCTTTCTT+GGG | - | chr5_2:48947127-48947146 | None:intergenic | 25.0% |
| !! | ATTGTTATTCTTCTCTTTCT+TGG | - | chr5_2:48947128-48947147 | None:intergenic | 25.0% |
| !!! | AGTGAAGCATTTTCAAATTT+AGG | - | chr5_2:48947196-48947215 | None:intergenic | 25.0% |
| !!! | TATAATTAATCTCTGGCTTT+GGG | - | chr5_2:48947222-48947241 | None:intergenic | 25.0% |
| !! | ATATAATTAATCTCTGGCTT+TGG | - | chr5_2:48947223-48947242 | None:intergenic | 25.0% |
| ! | GTGTCAATATAATTAATCTC+TGG | - | chr5_2:48947229-48947248 | None:intergenic | 25.0% |
| ! | ATTTGAATTCTTCTCATAGT+CGG | + | chr5_2:48947614-48947633 | Msa0773670:three_prime_UTR | 25.0% |
| !!! | ACTATTTTCTGAAAAAGTCT+TGG | + | chr5_2:48947683-48947702 | Msa0773670:intron | 25.0% |
| ! | TCTTTATTATGTGATTGTCA+TGG | + | chr5_2:48947895-48947914 | Msa0773670:intron | 25.0% |
| ! | TTTTCACTATTCATTTCAGG+AGG | + | chr5_2:48943315-48943334 | Msa0773670:five_prime_UTR | 30.0% |
| TTTCACTATTCATTTCAGGA+GGG | + | chr5_2:48943316-48943335 | Msa0773670:five_prime_UTR | 30.0% | |
| TGATGAAGCTAAACAATACA+AGG | + | chr5_2:48943384-48943403 | Msa0773670:CDS | 30.0% | |
| TTATGAATTCGATAACTGCA+TGG | - | chr5_2:48943419-48943438 | None:intergenic | 30.0% | |
| ! | ACAACTTTTACATACTTAGG+GGG | - | chr5_2:48943721-48943740 | None:intergenic | 30.0% |
| ! | CACAACTTTTACATACTTAG+GGG | - | chr5_2:48943722-48943741 | None:intergenic | 30.0% |
| !! | TTCACTTTTGGTTGCAATTT+TGG | + | chr5_2:48943786-48943805 | Msa0773670:intron | 30.0% |
| !! | TTCACTTTTGGTTGCAATTT+TGG | - | chr5_2:48943786-48943805 | None:intergenic | 30.0% |
| TGCAACCAAAAGTGAATTTA+AGG | + | chr5_2:48944992-48945011 | Msa0773670:intron | 30.0% | |
| GCAACCAAAAGTGAATTTAA+GGG | + | chr5_2:48944993-48945012 | Msa0773670:intron | 30.0% | |
| CAACCAAAAGTGAATTTAAG+GGG | + | chr5_2:48944994-48945013 | Msa0773670:intron | 30.0% | |
| ! | GTATCCAAAAGTTGAGATTT+TGG | - | chr5_2:48945048-48945067 | None:intergenic | 30.0% |
| ! | ATCTCAACTTTTGGATACTT+AGG | + | chr5_2:48945050-48945069 | Msa0773670:intron | 30.0% |
| ! | TCTCAACTTTTGGATACTTA+GGG | + | chr5_2:48945051-48945070 | Msa0773670:intron | 30.0% |
| GAAAAAAGGAGAAATACAGA+AGG | - | chr5_2:48945162-48945181 | None:intergenic | 30.0% | |
| GTTATCTTTAGCGATTTAAC+TGG | + | chr5_2:48945573-48945592 | Msa0773670:intron | 30.0% | |
| AGAATTTATCTGCAGAGATA+AGG | + | chr5_2:48945654-48945673 | Msa0773670:CDS | 30.0% | |
| TGATCATCAATTGAAGTTGA+TGG | + | chr5_2:48945759-48945778 | Msa0773670:CDS | 30.0% | |
| !!! | TGTGGCTTTTATTGATTCAT+TGG | + | chr5_2:48946090-48946109 | Msa0773670:intron | 30.0% |
| ! | TGATTCATTGGCTATCAAAT+AGG | + | chr5_2:48946102-48946121 | Msa0773670:intron | 30.0% |
| TGGCTATCAAATAGGAAAAT+CGG | + | chr5_2:48946110-48946129 | Msa0773670:intron | 30.0% | |
| ATCTGATATTTCCATATCCT+CGG | - | chr5_2:48946152-48946171 | None:intergenic | 30.0% | |
| AGATGCAACTAATGATGAAT+GGG | + | chr5_2:48946195-48946214 | Msa0773670:CDS | 30.0% | |
| AGGAAAAGAAAATCTAAAGG+CGG | + | chr5_2:48946241-48946260 | Msa0773670:CDS | 30.0% | |
| ! | ACATCTTCAATCTAAAGTGT+CGG | - | chr5_2:48946801-48946820 | None:intergenic | 30.0% |
| GGAAAAGAAAACATAGGAAA+TGG | - | chr5_2:48946991-48947010 | None:intergenic | 30.0% | |
| ! | TTTCCTATGTTTTCTTTTCC+AGG | + | chr5_2:48946991-48947010 | Msa0773670:intron | 30.0% |
| TTCTGTAACAAGAACTATTG+AGG | - | chr5_2:48947065-48947084 | None:intergenic | 30.0% | |
| TGTTATTCTTCTCTTTCTTG+GGG | - | chr5_2:48947126-48947145 | None:intergenic | 30.0% | |
| TAGTGAAGCAAATGTATATG+AGG | + | chr5_2:48947147-48947166 | Msa0773670:CDS | 30.0% | |
| !! | GAAGCATTTTCAAATTTAGG+AGG | - | chr5_2:48947193-48947212 | None:intergenic | 30.0% |
| !! | ATAATTAATCTCTGGCTTTG+GGG | - | chr5_2:48947221-48947240 | None:intergenic | 30.0% |
| ! | AAATCCCTTTGAAAATACCA+CGG | + | chr5_2:48947251-48947270 | Msa0773670:CDS | 30.0% |
| ATCAAATACTATCCTTCCAT+TGG | + | chr5_2:48947294-48947313 | Msa0773670:CDS | 30.0% | |
| TCAAATACTATCCTTCCATT+GGG | + | chr5_2:48947295-48947314 | Msa0773670:CDS | 30.0% | |
| ! | TCTTTCTCAAGTGTTCTTTT+TGG | - | chr5_2:48947394-48947413 | None:intergenic | 30.0% |
| ATGCCATTGACATATTCTTA+TGG | + | chr5_2:48947458-48947477 | Msa0773670:three_prime_UTR | 30.0% | |
| TCACCATAAGAATATGTCAA+TGG | - | chr5_2:48947464-48947483 | None:intergenic | 30.0% | |
| ! | TCTATTGAAGAGACTTGTTT+GGG | + | chr5_2:48947485-48947504 | Msa0773670:three_prime_UTR | 30.0% |
| TCCAAGTAGTTGAAATTGAA+TGG | + | chr5_2:48947578-48947597 | Msa0773670:three_prime_UTR | 30.0% | |
| ACCATTCAATTTCAACTACT+TGG | - | chr5_2:48947582-48947601 | None:intergenic | 30.0% | |
| !! | TTTTCTGAAAAAGTCTTGGT+TGG | + | chr5_2:48947687-48947706 | Msa0773670:intron | 30.0% |
| ! | TTTCTGAAAAAGTCTTGGTT+GGG | + | chr5_2:48947688-48947707 | Msa0773670:intron | 30.0% |
| AAGAAAATAGGAGAAAGTCT+TGG | - | chr5_2:48947879-48947898 | None:intergenic | 30.0% | |
| CAACCAAAAGTGAACTTAAG+GGG | - | chr5_2:48943780-48943799 | None:intergenic | 35.0% | |
| GCAACCAAAAGTGAACTTAA+GGG | - | chr5_2:48943781-48943800 | None:intergenic | 35.0% | |
| TGCAACCAAAAGTGAACTTA+AGG | - | chr5_2:48943782-48943801 | None:intergenic | 35.0% | |
| ! | TTTGTTGACTGGGTCAAAAT+TGG | + | chr5_2:48944953-48944972 | Msa0773670:intron | 35.0% |
| ! | CTCAACTTTTGGATACTTAG+GGG | + | chr5_2:48945052-48945071 | Msa0773670:intron | 35.0% |
| ! | TCAACTTTTGGATACTTAGG+GGG | + | chr5_2:48945053-48945072 | Msa0773670:intron | 35.0% |
| ! | AGTGGCAAGCATATTTTCAA+GGG | - | chr5_2:48945273-48945292 | None:intergenic | 35.0% |
| ! | AAGTGGCAAGCATATTTTCA+AGG | - | chr5_2:48945274-48945293 | None:intergenic | 35.0% |
| TTCTACAACACTAGTGTCTA+TGG | + | chr5_2:48945295-48945314 | Msa0773670:CDS | 35.0% | |
| GTTCACTTGAACAGTTGAAA+AGG | + | chr5_2:48945722-48945741 | Msa0773670:CDS | 35.0% | |
| TCAGAACATCAGTAAAGTCA+AGG | - | chr5_2:48945856-48945875 | None:intergenic | 35.0% | |
| TATGGACAGTGAGACATTAA+CGG | - | chr5_2:48945925-48945944 | None:intergenic | 35.0% | |
| ATAATATCCTGAATCTCGCA+TGG | - | chr5_2:48945986-48946005 | None:intergenic | 35.0% | |
| CGAGATTCAGGATATTATGT+TGG | + | chr5_2:48945988-48946007 | Msa0773670:CDS | 35.0% | |
| GATTCAGGATATTATGTTGG+AGG | + | chr5_2:48945991-48946010 | Msa0773670:CDS | 35.0% | |
| ! | TACCATTTTATCCGAGGATA+TGG | + | chr5_2:48946138-48946157 | Msa0773670:CDS | 35.0% |
| TTCCATATCCTCGGATAAAA+TGG | - | chr5_2:48946143-48946162 | None:intergenic | 35.0% | |
| GAGATGCAACTAATGATGAA+TGG | + | chr5_2:48946194-48946213 | Msa0773670:CDS | 35.0% | |
| GTAATGTCTGCAAAATTGCA+CGG | + | chr5_2:48946217-48946236 | Msa0773670:CDS | 35.0% | |
| GGCAGGAAAAGAAAATCTAA+AGG | + | chr5_2:48946238-48946257 | Msa0773670:CDS | 35.0% | |
| ATTTCAACAGAAACACCAGA+TGG | + | chr5_2:48946322-48946341 | Msa0773670:CDS | 35.0% | |
| ! | TCTGATGCAGTTTTTACAGA+TGG | - | chr5_2:48946349-48946368 | None:intergenic | 35.0% |
| ! | TTTCGATGTTTTGCAAGAAG+AGG | - | chr5_2:48946395-48946414 | None:intergenic | 35.0% |
| TGAAGATGTTTGACACATGT+TGG | + | chr5_2:48946812-48946831 | Msa0773670:intron | 35.0% | |
| TAGCCTGGAAAAGAAAACAT+AGG | - | chr5_2:48946997-48947016 | None:intergenic | 35.0% | |
| GCTAAATCAAATGCCATGAA+GGG | + | chr5_2:48947013-48947032 | Msa0773670:CDS | 35.0% | |
| GTTATTCTTCTCTTTCTTGG+GGG | - | chr5_2:48947125-48947144 | None:intergenic | 35.0% | |
| !! | TAATTAATCTCTGGCTTTGG+GGG | - | chr5_2:48947220-48947239 | None:intergenic | 35.0% |
| ! | AATCCCTTTGAAAATACCAC+GGG | + | chr5_2:48947252-48947271 | Msa0773670:CDS | 35.0% |
| GCAAGATGAGTCAATCAAAA+AGG | + | chr5_2:48947336-48947355 | Msa0773670:CDS | 35.0% | |
| TGGAATTGTAGCATCAACTT+CGG | - | chr5_2:48947365-48947384 | None:intergenic | 35.0% | |
| ! | AGTGTTCTTTTTGGACGAAT+TGG | - | chr5_2:48947385-48947404 | None:intergenic | 35.0% |
| ! | GTCTATTGAAGAGACTTGTT+TGG | + | chr5_2:48947484-48947503 | Msa0773670:three_prime_UTR | 35.0% |
| TGGAACGATAACTATTACCA+GGG | - | chr5_2:48947562-48947581 | None:intergenic | 35.0% | |
| TTGGAACGATAACTATTACC+AGG | - | chr5_2:48947563-48947582 | None:intergenic | 35.0% | |
| TCGGTAGAATTAGTTGAGAA+TGG | + | chr5_2:48947633-48947652 | Msa0773670:three_prime_UTR | 35.0% | |
| ! | AAACCCAACACCTCAATTTT+GGG | + | chr5_2:48947714-48947733 | Msa0773670:intron | 35.0% |
| ! | AAACCCAACACCTCAATTTT+GGG | - | chr5_2:48947714-48947733 | None:intergenic | 35.0% |
| AATAGGAGAAAGTCTTGGTT+GGG | - | chr5_2:48947874-48947893 | None:intergenic | 35.0% | |
| AAATAGGAGAAAGTCTTGGT+TGG | - | chr5_2:48947875-48947894 | None:intergenic | 35.0% | |
| AACTGAGTGCCAGGTTAAAA+TGG | + | chr5_2:48943261-48943280 | Msa0773670:five_prime_UTR | 40.0% | |
| CAGGTTAAAATGGCTATGGA+GGG | + | chr5_2:48943271-48943290 | Msa0773670:five_prime_UTR | 40.0% | |
| ! | CTCTGCTTCTTCTTTTAACC+TGG | - | chr5_2:48943363-48943382 | None:intergenic | 40.0% |
| ACTGGGTCAAAATTGGGTTA+GGG | - | chr5_2:48943814-48943833 | None:intergenic | 40.0% | |
| CGGGTTCATTATGTGTATTC+CGG | - | chr5_2:48944353-48944372 | None:intergenic | 40.0% | |
| CGGAATACACATAATGAACC+CGG | + | chr5_2:48944351-48944370 | Msa0773670:intron | 40.0% | |
| ! | TGGCCCCTTAAATTCACTTT+TGG | - | chr5_2:48945000-48945019 | None:intergenic | 40.0% |
| CAGTGATGTATCAATGTCTC+CGG | + | chr5_2:48945223-48945242 | Msa0773670:intron | 40.0% | |
| CACTAGTGTTGTAGAAGAAG+TGG | - | chr5_2:48945291-48945310 | None:intergenic | 40.0% | |
| TATGGCATCTCAGTTATCAG+AGG | + | chr5_2:48945313-48945332 | Msa0773670:CDS | 40.0% | |
| TAAATTCTTGGCATCAGCGA+GGG | - | chr5_2:48945393-48945412 | None:intergenic | 40.0% | |
| TTAAATTCTTGGCATCAGCG+AGG | - | chr5_2:48945394-48945413 | None:intergenic | 40.0% | |
| ! | TCAATCTAGCTTCTTCCTCT+AGG | + | chr5_2:48945426-48945445 | Msa0773670:CDS | 40.0% |
| !! | TGAAGATTAGCTCTACCTAG+AGG | - | chr5_2:48945444-48945463 | None:intergenic | 40.0% |
| ! | TTTTTCTCGCAAAGAACACC+TGG | - | chr5_2:48945635-48945654 | None:intergenic | 40.0% |
| TATCTGCAGAGATAAGGACA+TGG | + | chr5_2:48945660-48945679 | Msa0773670:CDS | 40.0% | |
| TTGAACAGTTGAAAAGGCAG+AGG | + | chr5_2:48945728-48945747 | Msa0773670:CDS | 40.0% | |
| TGAACAGTTGAAAAGGCAGA+GGG | + | chr5_2:48945729-48945748 | Msa0773670:CDS | 40.0% | |
| GATGCTGAATCAGATGAGTA+TGG | + | chr5_2:48946169-48946188 | Msa0773670:CDS | 40.0% | |
| ! | GTTTTTACAGATGGTCCATC+TGG | - | chr5_2:48946340-48946359 | None:intergenic | 40.0% |
| ! | TGTTTGCACACTTTGTTTCC+CGG | - | chr5_2:48946465-48946484 | None:intergenic | 40.0% |
| ACAAAGTGTGCAAACAGAGA+AGG | + | chr5_2:48946469-48946488 | Msa0773670:CDS | 40.0% | |
| CTGAAGCTAACACTGATCAT+GGG | + | chr5_2:48946590-48946609 | Msa0773670:CDS | 40.0% | |
| ! | ATGTCAGAGAGAGCTTTTCT+TGG | - | chr5_2:48946616-48946635 | None:intergenic | 40.0% |
| AGAAAAGCTCTCTCTGACAT+TGG | + | chr5_2:48946616-48946635 | Msa0773670:CDS | 40.0% | |
| CTCTGACATTGGAAATACAC+TGG | + | chr5_2:48946627-48946646 | Msa0773670:CDS | 40.0% | |
| GATGTTTGACACATGTTGGT+TGG | + | chr5_2:48946816-48946835 | Msa0773670:intron | 40.0% | |
| GTTGGTATCTCTCACTGATA+TGG | + | chr5_2:48946834-48946853 | Msa0773670:intron | 40.0% | |
| !! | AAGCATTATCGGTTTCTACG+TGG | + | chr5_2:48946904-48946923 | Msa0773670:intron | 40.0% |
| ! | TCATGGCATTTGATTTAGCC+TGG | - | chr5_2:48947012-48947031 | None:intergenic | 40.0% |
| GGCTAAATCAAATGCCATGA+AGG | + | chr5_2:48947012-48947031 | Msa0773670:intron | 40.0% | |
| ! | AGGGTATCCAGAGAAAGAAA+TGG | + | chr5_2:48947032-48947051 | Msa0773670:CDS | 40.0% |
| GTATCCAGAGAAAGAAATGG+CGG | + | chr5_2:48947035-48947054 | Msa0773670:CDS | 40.0% | |
| ATTTCCGCCATTTCTTTCTC+TGG | - | chr5_2:48947042-48947061 | None:intergenic | 40.0% | |
| GGAATTGTAGCATCAACTTC+GGG | - | chr5_2:48947364-48947383 | None:intergenic | 40.0% | |
| ACACTTGAGAAAGAGAACAG+TGG | + | chr5_2:48947400-48947419 | Msa0773670:CDS | 40.0% | |
| CACTTGAGAAAGAGAACAGT+GGG | + | chr5_2:48947401-48947420 | Msa0773670:CDS | 40.0% | |
| !!! | TGGTTGTATTTTGAAGTCCC+TGG | + | chr5_2:48947542-48947561 | Msa0773670:three_prime_UTR | 40.0% |
| GGAAGACCTATGCAAATGAT+AGG | + | chr5_2:48947654-48947673 | Msa0773670:three_prime_UTR | 40.0% | |
| ! | CAAACCCAACACCTCAATTT+TGG | + | chr5_2:48947713-48947732 | Msa0773670:intron | 40.0% |
| TGAGTATGTGCCCAAAATTG+AGG | - | chr5_2:48947727-48947746 | None:intergenic | 40.0% | |
| ! | CAAACCCAACACCTCAATTT+TGG | - | chr5_2:48947713-48947732 | None:intergenic | 40.0% |
| TTCAACTCACGTTGATCTCT+AGG | - | chr5_2:48947921-48947940 | None:intergenic | 40.0% | |
| GTGCCAGGTTAAAATGGCTA+TGG | + | chr5_2:48943267-48943286 | Msa0773670:five_prime_UTR | 45.0% | |
| !! | CCTCCATAGCCATTTTAACC+TGG | - | chr5_2:48943273-48943292 | None:intergenic | 45.0% |
| CCAGGTTAAAATGGCTATGG+AGG | + | chr5_2:48943270-48943289 | Msa0773670:five_prime_UTR | 45.0% | |
| TCATTTCAGGAGGGCTGAAA+TGG | + | chr5_2:48943325-48943344 | Msa0773670:exon | 45.0% | |
| ! | TGGCCCCTTAAGTTCACTTT+TGG | + | chr5_2:48943774-48943793 | Msa0773670:intron | 45.0% |
| ! | TGGGTCAAAATTGGGTTAGG+GGG | - | chr5_2:48943812-48943831 | None:intergenic | 45.0% |
| ! | CTGGGTCAAAATTGGGTTAG+GGG | - | chr5_2:48943813-48943832 | None:intergenic | 45.0% |
| GACTGGGTCAAAATTGGGTT+AGG | - | chr5_2:48943815-48943834 | None:intergenic | 45.0% | |
| !! | GCGTTGACTGGGTCAAAATT+GGG | - | chr5_2:48943820-48943839 | None:intergenic | 45.0% |
| !! | AGCGTTGACTGGGTCAAAAT+TGG | - | chr5_2:48943821-48943840 | None:intergenic | 45.0% |
| TGACTGGGTCAAAATTGGCT+TGG | + | chr5_2:48944958-48944977 | Msa0773670:intron | 45.0% | |
| ! | GACTGGGTCAAAATTGGCTT+GGG | + | chr5_2:48944959-48944978 | Msa0773670:intron | 45.0% |
| !! | ACTGGGTCAAAATTGGCTTG+GGG | + | chr5_2:48944960-48944979 | Msa0773670:intron | 45.0% |
| ! | GGGGCCAAAATCTCAACTTT+TGG | + | chr5_2:48945041-48945060 | Msa0773670:intron | 45.0% |
| ATCCTTGAACTTCTTGCAGC+CGG | - | chr5_2:48945245-48945264 | None:intergenic | 45.0% | |
| AGTTATCAGAGGCAGAAGAG+CGG | + | chr5_2:48945324-48945343 | Msa0773670:CDS | 45.0% | |
| !! | GAACGGGTTTTCAGTGGAAA+AGG | + | chr5_2:48945347-48945366 | Msa0773670:CDS | 45.0% |
| ! | TTTTCAGTGGAAAAGGACGC+TGG | + | chr5_2:48945354-48945373 | Msa0773670:CDS | 45.0% |
| TCAGAATCCATGCGAGATTC+AGG | + | chr5_2:48945976-48945995 | Msa0773670:CDS | 45.0% | |
| TCCTTATGACTTACGCAAGC+TGG | + | chr5_2:48946017-48946036 | Msa0773670:CDS | 45.0% | |
| ACCAGCTTGCGTAAGTCATA+AGG | - | chr5_2:48946021-48946040 | None:intergenic | 45.0% | |
| TATGACTTACGCAAGCTGGT+AGG | + | chr5_2:48946021-48946040 | Msa0773670:intron | 45.0% | |
| ! | GCGATCTACCATTTTATCCG+AGG | + | chr5_2:48946132-48946151 | Msa0773670:CDS | 45.0% |
| GCTGAATCAGATGAGTATGG+TGG | + | chr5_2:48946172-48946191 | Msa0773670:CDS | 45.0% | |
| AAATGCGCTTGCAGAGCTAT+GGG | + | chr5_2:48946412-48946431 | Msa0773670:CDS | 45.0% | |
| AGAGCTATGGGAATTGGTTG+TGG | + | chr5_2:48946424-48946443 | Msa0773670:CDS | 45.0% | |
| ATTGGTTGTGGAAGCTCATG+CGG | + | chr5_2:48946436-48946455 | Msa0773670:CDS | 45.0% | |
| AAGTGTGCAAACAGAGAAGG+AGG | + | chr5_2:48946472-48946491 | Msa0773670:CDS | 45.0% | |
| AGTGTGCAAACAGAGAAGGA+GGG | + | chr5_2:48946473-48946492 | Msa0773670:CDS | 45.0% | |
| TTTATCTGCTTCGTCGCTAC+CGG | - | chr5_2:48946512-48946531 | None:intergenic | 45.0% | |
| ! | AACCGCCTTCTAGAAACTCA+AGG | + | chr5_2:48946532-48946551 | Msa0773670:CDS | 45.0% |
| ! | CACCTTGAGTTTCTAGAAGG+CGG | - | chr5_2:48946537-48946556 | None:intergenic | 45.0% |
| ! | CAGCACCTTGAGTTTCTAGA+AGG | - | chr5_2:48946540-48946559 | None:intergenic | 45.0% |
| TTGCTTCAGGGTGCATTTGT+TGG | + | chr5_2:48946562-48946581 | Msa0773670:CDS | 45.0% | |
| TGCTTCAGGGTGCATTTGTT+GGG | + | chr5_2:48946563-48946582 | Msa0773670:CDS | 45.0% | |
| ! | TGATCAGTGTTAGCTTCAGC+AGG | - | chr5_2:48946589-48946608 | None:intergenic | 45.0% |
| GCTGAAGCTAACACTGATCA+TGG | + | chr5_2:48946589-48946608 | Msa0773670:CDS | 45.0% | |
| CTTTCTCTGGATACCCTTCA+TGG | - | chr5_2:48947029-48947048 | None:intergenic | 45.0% | |
| ! | TTAGGAGGTTGCGTTTTCTG+TGG | - | chr5_2:48947178-48947197 | None:intergenic | 45.0% |
| ! | TGGCCCGTGGTATTTTCAAA+GGG | - | chr5_2:48947258-48947277 | None:intergenic | 45.0% |
| ! | ATGGCCCGTGGTATTTTCAA+AGG | - | chr5_2:48947259-48947278 | None:intergenic | 45.0% |
| !! | TGATGACCCTTGCTTTTGCA+TGG | - | chr5_2:48947278-48947297 | None:intergenic | 45.0% |
| CATTCTTGTCTCCCAATGGA+AGG | - | chr5_2:48947309-48947328 | None:intergenic | 45.0% | |
| CTAGCATTCTTGTCTCCCAA+TGG | - | chr5_2:48947313-48947332 | None:intergenic | 45.0% | |
| GACCTATGCAAATGATAGGC+AGG | + | chr5_2:48947658-48947677 | Msa0773670:three_prime_UTR | 45.0% | |
| AGCCTGCCTATCATTTGCAT+AGG | - | chr5_2:48947663-48947682 | None:intergenic | 45.0% | |
| ! | GTGCCCAAAATTGAGGTGTT+GGG | - | chr5_2:48947842-48947861 | None:intergenic | 45.0% |
| TGTGCCCAAAATTGAGGTGT+TGG | - | chr5_2:48947841-48947860 | None:intergenic | 45.0% | |
| TGTGTGTGTGCCCAAAATTG+AGG | + | chr5_2:48947835-48947854 | Msa0773670:intron | 45.0% | |
| TGTGCCCAAAATTGAGGTGT+TGG | + | chr5_2:48947841-48947860 | Msa0773670:intron | 45.0% | |
| ! | GTGCCCAAAATTGAGGTGTT+GGG | + | chr5_2:48947842-48947861 | Msa0773670:intron | 45.0% |
| !!! | AAAAATTTTAATTAAAATTC+TGG | - | chr5_2:48944643-48944662 | None:intergenic | 5.0% |
| !!! | TTTATTTAGAATATTAAAAA+GGG | - | chr5_2:48945820-48945839 | None:intergenic | 5.0% |
| !!! | ATTTATTTAGAATATTAAAA+AGG | - | chr5_2:48945821-48945840 | None:intergenic | 5.0% |
| !! | AAATGGCTAAGGAGAGTGCC+AGG | + | chr5_2:48943342-48943361 | Msa0773670:exon | 50.0% |
| GACCCAGTCAACAAACACGT+GGG | - | chr5_2:48944948-48944967 | None:intergenic | 50.0% | |
| TGACCCAGTCAACAAACACG+TGG | - | chr5_2:48944949-48944968 | None:intergenic | 50.0% | |
| !! | CTGGGTCAAAATTGGCTTGG+GGG | + | chr5_2:48944961-48944980 | Msa0773670:intron | 50.0% |
| !! | TGGGTCAAAATTGGCTTGGG+GGG | + | chr5_2:48944962-48944981 | Msa0773670:intron | 50.0% |
| GTTATCAGAGGCAGAAGAGC+GGG | + | chr5_2:48945325-48945344 | Msa0773670:CDS | 50.0% | |
| AAGGACGCTGGAATCAAGTC+CGG | + | chr5_2:48945366-48945385 | Msa0773670:CDS | 50.0% | |
| CAGTTGAAAAGGCAGAGGGA+TGG | + | chr5_2:48945733-48945752 | Msa0773670:CDS | 50.0% | |
| TGTCTGCAAAATTGCACGGC+AGG | + | chr5_2:48946221-48946240 | Msa0773670:CDS | 50.0% | |
| AGGCGGCGAACATTCAAACT+TGG | + | chr5_2:48946258-48946277 | Msa0773670:CDS | 50.0% | |
| GAAATGCGCTTGCAGAGCTA+TGG | + | chr5_2:48946411-48946430 | Msa0773670:CDS | 50.0% | |
| GCTTGCAGAGCTATGGGAAT+TGG | + | chr5_2:48946418-48946437 | Msa0773670:CDS | 50.0% | |
| GGAGGGACTGTAAATGATCC+CGG | + | chr5_2:48946490-48946509 | Msa0773670:CDS | 50.0% | |
| TTATCTGCTTCGTCGCTACC+GGG | - | chr5_2:48946511-48946530 | None:intergenic | 50.0% | |
| !! | TCAAGGTGCTGAGTTGCTTC+AGG | + | chr5_2:48946549-48946568 | Msa0773670:CDS | 50.0% |
| !! | CAAGGTGCTGAGTTGCTTCA+GGG | + | chr5_2:48946550-48946569 | Msa0773670:CDS | 50.0% |
| ATACCTGGCTGCGATGAAGA+TGG | - | chr5_2:48947094-48947113 | None:intergenic | 50.0% | |
| !! | TTGGGGGCATCTGAAATACC+TGG | - | chr5_2:48947109-48947128 | None:intergenic | 50.0% |
| CAGGAGGGCTGAAATGGCTA+AGG | + | chr5_2:48943331-48943350 | Msa0773670:exon | 55.0% | |
| ! | CGCCCACGTGTTTGTTGACT+GGG | + | chr5_2:48944943-48944962 | Msa0773670:intron | 55.0% |
| CTCCGGCTGCAAGAAGTTCA+AGG | + | chr5_2:48945240-48945259 | Msa0773670:CDS | 55.0% | |
| CACGGGCCATGCAAAAGCAA+GGG | + | chr5_2:48947269-48947288 | Msa0773670:CDS | 55.0% | |
| TGACCCAGTCAACGCTGACG+TGG | + | chr5_2:48943825-48943844 | Msa0773670:intron | 60.0% | |
| !! | CGTCCACGTCAGCGTTGACT+GGG | - | chr5_2:48943831-48943850 | None:intergenic | 60.0% |
| ! | GCGCCCACGTGTTTGTTGAC+TGG | + | chr5_2:48944942-48944961 | Msa0773670:intron | 60.0% |
| CAGAGGCAGAAGAGCGGGAA+CGG | + | chr5_2:48945330-48945349 | Msa0773670:CDS | 60.0% | |
| AGAGGCAGAAGAGCGGGAAC+GGG | + | chr5_2:48945331-48945350 | Msa0773670:CDS | 60.0% | |
| !! | GAGCGGGAACGGGTTTTCAG+TGG | + | chr5_2:48945341-48945360 | Msa0773670:CDS | 60.0% |
| TCTTGGCATCAGCGAGGGAC+CGG | - | chr5_2:48945388-48945407 | None:intergenic | 60.0% | |
| GTGGAAGCTCATGCGGTTGC+CGG | + | chr5_2:48946443-48946462 | Msa0773670:CDS | 60.0% | |
| TGGAAGCTCATGCGGTTGCC+GGG | + | chr5_2:48946444-48946463 | Msa0773670:CDS | 60.0% | |
| GGCTGCGATGAAGATGGAGG+CGG | - | chr5_2:48947088-48947107 | None:intergenic | 60.0% | |
| CCTGGCTGCGATGAAGATGG+AGG | - | chr5_2:48947091-48947110 | None:intergenic | 60.0% | |
| CCTCCATCTTCATCGCAGCC+AGG | + | chr5_2:48947088-48947107 | Msa0773670:CDS | 60.0% | |
| !! | CCTTGCTTTTGCATGGCCCG+TGG | - | chr5_2:48947271-48947290 | None:intergenic | 60.0% |
| CCACGGGCCATGCAAAAGCA+AGG | + | chr5_2:48947268-48947287 | Msa0773670:CDS | 60.0% | |
| !! | GCGTCCACGTCAGCGTTGAC+TGG | - | chr5_2:48943832-48943851 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 48943256 | 48947988 | 48943256 | ID=Msa0773670;Name=Msa0773670 |
| chr5_2 | mRNA | 48943256 | 48947988 | 48943256 | ID=Msa0773670-mRNA-1;Parent=Msa0773670;Name=Msa0773670-mRNA-1;_AED=0.00;_eAED=0.00;_QI=88|1|1|1|0.66|0.42|7|354|478 |
| chr5_2 | exon | 48943256 | 48943405 | 48943256 | ID=Msa0773670-mRNA-1:exon:14635;Parent=Msa0773670-mRNA-1 |
| chr5_2 | exon | 48945226 | 48945447 | 48945226 | ID=Msa0773670-mRNA-1:exon:14636;Parent=Msa0773670-mRNA-1 |
| chr5_2 | exon | 48945636 | 48945780 | 48945636 | ID=Msa0773670-mRNA-1:exon:14637;Parent=Msa0773670-mRNA-1 |
| chr5_2 | exon | 48945973 | 48946038 | 48945973 | ID=Msa0773670-mRNA-1:exon:14638;Parent=Msa0773670-mRNA-1 |
| chr5_2 | exon | 48946124 | 48946648 | 48946124 | ID=Msa0773670-mRNA-1:exon:14639;Parent=Msa0773670-mRNA-1 |
| chr5_2 | exon | 48947013 | 48947692 | 48947013 | ID=Msa0773670-mRNA-1:exon:14640;Parent=Msa0773670-mRNA-1 |
| chr5_2 | exon | 48947898 | 48947988 | 48947898 | ID=Msa0773670-mRNA-1:exon:14641;Parent=Msa0773670-mRNA-1 |
| chr5_2 | five_prime_UTR | 48943256 | 48943343 | 48943256 | ID=Msa0773670-mRNA-1:five_prime_utr;Parent=Msa0773670-mRNA-1 |
| chr5_2 | CDS | 48943344 | 48943405 | 48943344 | ID=Msa0773670-mRNA-1:cds;Parent=Msa0773670-mRNA-1 |
| chr5_2 | CDS | 48945226 | 48945447 | 48945226 | ID=Msa0773670-mRNA-1:cds;Parent=Msa0773670-mRNA-1 |
| chr5_2 | CDS | 48945636 | 48945780 | 48945636 | ID=Msa0773670-mRNA-1:cds;Parent=Msa0773670-mRNA-1 |
| chr5_2 | CDS | 48945973 | 48946038 | 48945973 | ID=Msa0773670-mRNA-1:cds;Parent=Msa0773670-mRNA-1 |
| chr5_2 | CDS | 48946124 | 48946648 | 48946124 | ID=Msa0773670-mRNA-1:cds;Parent=Msa0773670-mRNA-1 |
| chr5_2 | CDS | 48947013 | 48947429 | 48947013 | ID=Msa0773670-mRNA-1:cds;Parent=Msa0773670-mRNA-1 |
| chr5_2 | three_prime_UTR | 48947430 | 48947692 | 48947430 | ID=Msa0773670-mRNA-1:three_prime_utr;Parent=Msa0773670-mRNA-1 |
| chr5_2 | three_prime_UTR | 48947898 | 48947988 | 48947898 | ID=Msa0773670-mRNA-1:three_prime_utr;Parent=Msa0773670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
