AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214270 MtrunA17_Chr4g0062931 93.594 562 16 4 1 549 1 555 0.0 851
Msa1214270 MtrunA17_Chr5g0429721 32.911 79 52 1 5 82 34 112 1.73e-12 69.3
Msa1214270 MtrunA17_Chr1g0210241 35.955 89 56 1 1 88 1 89 7.35e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214270 AT5G19960.1 42.487 193 66 5 1 184 1 157 1.52e-32 128
Msa1214270 AT5G19960.1 41.379 116 66 1 425 540 221 334 1.32e-15 78.6
Msa1214270 AT5G19960.2 41.379 116 66 1 425 540 133 246 7.34e-16 77.8
Msa1214270 AT4G39260.3 42.857 84 47 1 9 91 8 91 5.50e-15 70.9
Msa1214270 AT3G47120.2 39.474 76 45 1 5 79 34 109 3.82e-13 70.9
Msa1214270 AT3G47120.1 39.474 76 45 1 5 79 34 109 5.93e-13 70.9

Find 150 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCGTGTGGTTAAAGTTAA+TGG 0.201362 8_1:+74786454 Msa1214270:CDS
GGTGGTGGCAGATCAAATTT+TGG 0.241078 8_1:+74786508 Msa1214270:CDS
GTTATGAATCAGACTATTAA+TGG 0.247320 8_1:+74786433 Msa1214270:intron
TCCTATCTCTGTCACGGTCT+CGG 0.309537 8_1:-74787119 None:intergenic
CGCACTGTCTTCAATTTGTA+TGG 0.310277 8_1:+74786046 Msa1214270:CDS
GGTGGAGGTGGCGGCGGTGG+TGG 0.321867 8_1:+74786493 Msa1214270:CDS
GGGAAGACCACCAACGTAAA+TGG 0.322442 8_1:-74785999 None:intergenic
CCCTATCCCTGTCACGGTCT+CGG 0.354327 8_1:-74786840 None:intergenic
CATTACCATGATCATAATCT+TGG 0.358631 8_1:-74786615 None:intergenic
TGAAGTAGTAAATATCAATT+TGG 0.359952 8_1:+74785858 None:intergenic
GGCGGTGGAGGTGGCGGCGG+TGG 0.364263 8_1:+74786490 Msa1214270:CDS
CCCTATCCCTATCATGGTCT+CGG 0.372822 8_1:-74786933 None:intergenic
GTGAGGTCTCGTGGCGGTGG+AGG 0.372910 8_1:+74786478 Msa1214270:CDS
ATTGGAATCATGACGGTGAT+AGG 0.374936 8_1:+74787301 Msa1214270:CDS
CTTAAAATAAATTTAGCATA+TGG 0.379102 8_1:+74789808 Msa1214270:three_prime_UTR
TGTATGGTAAGATTCATCTT+TGG 0.384035 8_1:+74789686 Msa1214270:three_prime_UTR
ATAGGTCTCGAGACCATGAT+AGG 0.390177 8_1:+74786740 Msa1214270:CDS
CCCTGTCACGGTCACGGTCT+CGG 0.400331 8_1:-74787026 None:intergenic
CTTACAAATGGAAGTCTAGA+TGG 0.403989 8_1:+74789558 Msa1214270:CDS
AGGTCTCGTGGCGGTGGAGG+TGG 0.410261 8_1:+74786481 Msa1214270:CDS
ATGATGAAAGGAATGGAGAT+TGG 0.413487 8_1:+74786560 Msa1214270:CDS
CCTGTCACGGTCACGGTCTC+GGG 0.417238 8_1:-74787025 None:intergenic
ATAGATCCCGAGACCATGAT+AGG 0.418281 8_1:+74786926 Msa1214270:CDS
GCCGTGTGGTTAAAGTTAAT+GGG 0.420536 8_1:+74786455 Msa1214270:CDS
AAAGCGTGTTAGACCGTGAT+AGG 0.423664 8_1:+74787001 Msa1214270:CDS
AGAAAGAAGACTTAATGTTA+TGG 0.428868 8_1:+74788158 Msa1214270:CDS
AAAGCATGTTAGATGATGAT+TGG 0.430802 8_1:+74787283 Msa1214270:CDS
CCTATCTCTGTCACGGTCTC+GGG 0.431431 8_1:-74787118 None:intergenic
TTAGCATATGGCATCTTACC+TGG 0.431591 8_1:+74789820 Msa1214270:three_prime_UTR
CCCGAGACCGTGACCGTGAC+AGG 0.432306 8_1:+74787025 Msa1214270:CDS
TCTCGTGGCGGTGGAGGTGG+CGG 0.433817 8_1:+74786484 Msa1214270:CDS
TTCTAAGCTGGAAGAGGGAT+TGG 0.434291 8_1:+74788134 Msa1214270:CDS
TTACCTTGGTCAACTGCATC+TGG 0.438734 8_1:-74788365 None:intergenic
AAGATTATAGCAATGCTTGT+TGG 0.439117 8_1:-74789759 None:intergenic
CCTATCCCTGTCACGGTCTC+GGG 0.441091 8_1:-74786839 None:intergenic
CAAGCTAGAGCAAGTATGTT+AGG 0.441748 8_1:+74786898 Msa1214270:CDS
GGTGATGGTGATGGTGGTCT+TGG 0.448887 8_1:+74789531 Msa1214270:CDS
ATCAATGACCAACGTACACT+TGG 0.451190 8_1:+74786226 Msa1214270:CDS
AAAGCATGTTAGTCCGTGAT+AGG 0.455542 8_1:+74786815 Msa1214270:CDS
AACCATGATGTCACGGTCTC+GGG 0.456700 8_1:-74787211 None:intergenic
GGGGTGAGGTCTCGTGGCGG+TGG 0.457192 8_1:+74786475 Msa1214270:CDS
GGAGTTACAAAAGCACTCTA+AGG 0.459318 8_1:+74788179 Msa1214270:CDS
GAGACCGTGACATCATGGTT+AGG 0.463473 8_1:+74787214 Msa1214270:CDS
TGATAGGGCTGAAAATGAAC+TGG 0.463823 8_1:+74787317 Msa1214270:CDS
GACTAGAATGGAATTTGAAA+AGG 0.465301 8_1:-74789898 None:intergenic
TGATGAAAGGAATGGAGATT+GGG 0.465545 8_1:+74786561 Msa1214270:CDS
CTCATCATTGTGGTCCCCAT+TGG 0.467282 8_1:-74787617 None:intergenic
CCCGAGACCGTGACAGAGAT+AGG 0.470681 8_1:+74787118 Msa1214270:CDS
CGTGGCGGTGGAGGTGGCGG+CGG 0.472665 8_1:+74786487 Msa1214270:CDS
CGAGACCAAGATTATGATCA+TGG 0.478575 8_1:+74786610 Msa1214270:CDS
AGAGGTCTCGAGACCGTGAT+AGG 0.480387 8_1:+74786704 Msa1214270:CDS
GTAATGAGAAAGATGGATAC+AGG 0.480470 8_1:+74786632 Msa1214270:CDS
AAAGATGGATACAGGAATAG+AGG 0.481913 8_1:+74786640 Msa1214270:CDS
ACAGGAATAGAGGCAGTGAT+TGG 0.482052 8_1:+74786650 Msa1214270:CDS
ATAGTCCATCAGATTCCAAT+GGG 0.482340 8_1:+74787602 Msa1214270:CDS
TTCTATCCCTATCCCTATCA+TGG 0.483071 8_1:-74786753 None:intergenic
TTCTATCCCTATCCCTATCA+TGG 0.483071 8_1:-74786939 None:intergenic
CCCGAGACCGTGACAGGGAT+AGG 0.483596 8_1:+74786839 Msa1214270:CDS
TGTTTCATCAGTGGCGTCGA+AGG 0.487655 8_1:-74786020 None:intergenic
ACTGGAAAACAGCAGGGTAC+AGG 0.494266 8_1:+74787335 Msa1214270:CDS
ATAGGTCCCGAGACCGTGAC+AGG 0.495188 8_1:+74786833 Msa1214270:CDS
CTGGATTCACATCTAAGTTA+CGG 0.496163 8_1:-74787377 None:intergenic
TCGAGTCCAATCACCACCTC+TGG 0.499545 8_1:-74786674 None:intergenic
ATTGGACCAGAGGTGGTGAT+TGG 0.502244 8_1:+74786668 Msa1214270:CDS
TAACCATGATGTCACGGTCT+CGG 0.507957 8_1:-74787212 None:intergenic
GGTCTTGGACAACTTACAAA+TGG 0.508402 8_1:+74789546 Msa1214270:CDS
ACAGGGTGGAGATGTGGATA+AGG 0.508614 8_1:+74787353 Msa1214270:CDS
CCTATCCCTATCATGGTCTC+GGG 0.509297 8_1:-74786932 None:intergenic
AGACCGTGACATCATGGTTA+GGG 0.509461 8_1:+74787215 Msa1214270:CDS
CATCATAATGATGAAAGGAA+TGG 0.517662 8_1:+74786553 Msa1214270:CDS
CCCGAGACCATGATAGGGAT+AGG 0.517941 8_1:+74786932 Msa1214270:CDS
CACGGTCTCGGGACCTATCA+CGG 0.518091 8_1:-74787014 None:intergenic
AAAATGAACTGGAAAACAGC+AGG 0.521165 8_1:+74787328 Msa1214270:CDS
CTCGAGACCATGATAGGGAT+AGG 0.523344 8_1:+74786746 Msa1214270:CDS
TTGTAACTTTCACAAACCCT+AGG 0.525397 8_1:+74786263 Msa1214270:CDS
TAGCATCAATTGCAGACCTA+GGG 0.528965 8_1:-74786279 None:intergenic
CACGGTCTCGGGACCTATCA+CGG 0.531377 8_1:-74786828 None:intergenic
GATAGCTCCATTTACGTTGG+TGG 0.531498 8_1:+74785992 Msa1214270:CDS
GATCATGGTAATGAGAAAGA+TGG 0.531558 8_1:+74786625 Msa1214270:CDS
TATCTCACTAGCTCCATGTA+TGG 0.533587 8_1:+74789670 Msa1214270:three_prime_UTR
TCAGGTTTCTAAGCTGGAAG+AGG 0.536137 8_1:+74788128 Msa1214270:intron
CCGAGACCGTGACAGGGATA+GGG 0.537071 8_1:+74786840 Msa1214270:CDS
AGAGTGAAGGAGAAAGACTA+TGG 0.541578 8_1:+74785890 Msa1214270:five_prime_UTR
CTCGAGACCTATCACGGTCG+CGG 0.542402 8_1:-74786729 None:intergenic
CTGGAAAACAGCAGGGTACA+GGG 0.545302 8_1:+74787336 Msa1214270:CDS
CAGGTTTCTAAGCTGGAAGA+GGG 0.546464 8_1:+74788129 Msa1214270:intron
AAGATGAATCTTACCATACA+TGG 0.547436 8_1:-74789683 None:intergenic
TTCTGCTCCTATCTCTGTCA+CGG 0.549894 8_1:-74787125 None:intergenic
GTCCCGAGACCGTGACATCA+TGG 0.550463 8_1:+74787209 Msa1214270:CDS
ATAGCATCAATTGCAGACCT+AGG 0.550720 8_1:-74786280 None:intergenic
GACTACCTTGACATCAAGAA+TGG 0.552219 8_1:-74786071 None:intergenic
GAGCATATGCAAAATTATGA+TGG 0.553878 8_1:+74786781 Msa1214270:CDS
AGAAGAGTTGAGCATTTGCA+AGG 0.555050 8_1:+74787144 Msa1214270:CDS
TTATACCCCTGTCACGGTCA+CGG 0.557856 8_1:-74787032 None:intergenic
CCGAGACCATGATAGGGATA+GGG 0.559495 8_1:+74786933 Msa1214270:CDS
CCCCATTAACTTTAACCACA+CGG 0.561289 8_1:-74786456 None:intergenic
CAGGGTACAGGGTGGAGATG+TGG 0.563252 8_1:+74787347 Msa1214270:CDS
AAAGCATGTTAGACCGCGAT+GGG 0.565934 8_1:+74787187 Msa1214270:CDS
TTCTATCCCTATCCCTGTCA+CGG 0.566463 8_1:-74786846 None:intergenic
GAACACATGCTAGATTATGA+TGG 0.568841 8_1:+74786874 Msa1214270:CDS
GAAATTCATACTATATTGTG+CGG 0.571168 8_1:+74789717 Msa1214270:three_prime_UTR
TGGTCCCCATTGGAATCTGA+TGG 0.575643 8_1:-74787607 None:intergenic
GTTTCATCAGTGGCGTCGAA+GGG 0.576277 8_1:-74786019 None:intergenic
TGGTTAAAGTTAATGGGGTG+AGG 0.576628 8_1:+74786461 Msa1214270:CDS
TCTTACTCGATGTTTCTCCT+CGG 0.578233 8_1:-74787462 None:intergenic
ATTATCATCATAATGATGAA+AGG 0.578991 8_1:+74786548 Msa1214270:CDS
AATAGTCCATCAGATTCCAA+TGG 0.582473 8_1:+74787601 Msa1214270:CDS
AGGAATGGAGATTGGGATCG+TGG 0.582856 8_1:+74786568 Msa1214270:CDS
TCGAGACCATGATAGGGATA+GGG 0.583018 8_1:+74786747 Msa1214270:CDS
GAAAGCATGTTAGACCGCGA+TGG 0.583363 8_1:+74787186 Msa1214270:CDS
TAGCATATGGCATCTTACCT+GGG 0.588864 8_1:+74789821 Msa1214270:three_prime_UTR
TGGCGCCATTCTTGATGTCA+AGG 0.589109 8_1:+74786066 Msa1214270:CDS
CATGGTCTCGAGACCTATCA+CGG 0.589442 8_1:-74786735 None:intergenic
GTTAATGGGGTGAGGTCTCG+TGG 0.592393 8_1:+74786469 Msa1214270:CDS
TTGGAATCATGACGGTGATA+GGG 0.593640 8_1:+74787302 Msa1214270:CDS
GGCAGTGATTGGACCAGAGG+TGG 0.596616 8_1:+74786661 Msa1214270:CDS
CCGAGACCGTGACCGTGACA+GGG 0.596911 8_1:+74787026 Msa1214270:CDS
ATTGGACTCGACAGCATCAG+AGG 0.597239 8_1:+74786686 Msa1214270:CDS
GAGAGTGACGGTGATGGTGA+TGG 0.598421 8_1:+74789522 Msa1214270:CDS
TTGTCTCTTTAATTGCCTAG+TGG 0.600658 8_1:+74789640 Msa1214270:three_prime_UTR
TCAATGACCAACGTACACTT+GGG 0.603480 8_1:+74786227 Msa1214270:CDS
TCAATATTGTTCGAGAGTGA+CGG 0.605658 8_1:+74789510 Msa1214270:CDS
TAGATCCCGAGACCATGATA+GGG 0.613104 8_1:+74786927 Msa1214270:CDS
AGTGCGAATTGTTTCATCAG+TGG 0.616718 8_1:-74786029 None:intergenic
TCAGTTCCACAAAATGACAC+TGG 0.624699 8_1:+74785964 Msa1214270:exon
AGAGGCAGTGATTGGACCAG+AGG 0.630012 8_1:+74786658 Msa1214270:CDS
AGCATTTCCCAAGTGTACGT+TGG 0.632194 8_1:-74786234 None:intergenic
GATGCTATCAACGATATGAA+CGG 0.633466 8_1:+74786295 Msa1214270:CDS
TATCCCTAACCATGATGTCA+CGG 0.634194 8_1:-74787218 None:intergenic
ATCACATTACCTCATCATTG+TGG 0.638871 8_1:-74787627 None:intergenic
TAGGTCTCGAGACCATGATA+GGG 0.644021 8_1:+74786741 Msa1214270:CDS
CACGGTCTCGGGACCCATCG+CGG 0.649874 8_1:-74787200 None:intergenic
AGTGACGGTGATGGTGATGG+TGG 0.650592 8_1:+74789525 Msa1214270:CDS
GATGATAGCTCCATTTACGT+TGG 0.659955 8_1:+74785989 Msa1214270:CDS
AGGTAGAAGATGAATTAGAG+AGG 0.662402 8_1:+74787786 Msa1214270:intron
CGAGACCGTGACCGTGACAG+GGG 0.664208 8_1:+74787027 Msa1214270:CDS
CAATGGGGACCACAATGATG+AGG 0.667084 8_1:+74787618 Msa1214270:CDS
TCGCCAGATGCAGTTGACCA+AGG 0.667948 8_1:+74788362 Msa1214270:CDS
TTGTTCGAGAGTGACGGTGA+TGG 0.673128 8_1:+74789516 Msa1214270:CDS
AAATGAACTGGAAAACAGCA+GGG 0.689851 8_1:+74787329 Msa1214270:CDS
ATATTTACCGCAGAAACGGG+AGG 0.695680 8_1:+74788305 Msa1214270:intron
AATGGGGTGAGGTCTCGTGG+CGG 0.699964 8_1:+74786472 Msa1214270:CDS
GATGATGATTGGAATCATGA+CGG 0.709264 8_1:+74787294 Msa1214270:CDS
TAGGTCCCGAGACCGTGACA+GGG 0.714552 8_1:+74786834 Msa1214270:CDS
CCGTGTGGTTAAAGTTAATG+GGG 0.715692 8_1:+74786456 Msa1214270:CDS
TCAGACTATTAATGGCCGTG+TGG 0.721965 8_1:+74786441 Msa1214270:intron
AATGGAGATTGGGATCGTGG+CGG 0.727702 8_1:+74786571 Msa1214270:CDS
GCAATTAAAGAGACAACACA+TGG 0.728798 8_1:-74789633 None:intergenic
GAAAACAGCAGGGTACAGGG+TGG 0.744053 8_1:+74787339 Msa1214270:CDS
TAGTCCATCAGATTCCAATG+GGG 0.775487 8_1:+74787603 Msa1214270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATAATTAACAA+GGG - chr8_1:74786133-74786152 None:intergenic 10.0%
!! AAGAAATTAAATAATTAACA+AGG - chr8_1:74786134-74786153 None:intergenic 10.0%
!! TAATAATCAATTCAAGTAAT+TGG + chr8_1:74786158-74786177 Msa1214270:intron 15.0%
!! AATAATCAATTCAAGTAATT+GGG + chr8_1:74786159-74786178 Msa1214270:intron 15.0%
!! AAACTAAAATGAATGAATAA+TGG + chr8_1:74787858-74787877 Msa1214270:intron 15.0%
!! TTATCAAACATTCAAATATT+GGG - chr8_1:74787993-74788012 None:intergenic 15.0%
!! TTTATCAAACATTCAAATAT+TGG - chr8_1:74787994-74788013 None:intergenic 15.0%
!!! AAATATAACTTTTTGGAAAA+GGG - chr8_1:74788882-74788901 None:intergenic 15.0%
!!! AAAATATAACTTTTTGGAAA+AGG - chr8_1:74788883-74788902 None:intergenic 15.0%
!! CTTAAAATAAATTTAGCATA+TGG + chr8_1:74789808-74789827 Msa1214270:three_prime_UTR 15.0%
!! AGTTTATTTGTGTTAATGTT+TGG + chr8_1:74786356-74786375 Msa1214270:intron 20.0%
!! ATTATCATCATAATGATGAA+AGG + chr8_1:74786548-74786567 Msa1214270:CDS 20.0%
!! GTAAAAACAAGATTAAAATG+TGG - chr8_1:74787749-74787768 None:intergenic 20.0%
!!! ATAATGGAAATTTGTCAATA+TGG + chr8_1:74787874-74787893 Msa1214270:intron 20.0%
!! TAAATGATATTGCTAACATT+GGG + chr8_1:74788425-74788444 Msa1214270:intron 20.0%
!! TAAACATTATAAAAAGTCAC+AGG - chr8_1:74788625-74788644 None:intergenic 20.0%
!! AATGTTTAAATTTCACAATG+TGG + chr8_1:74788637-74788656 Msa1214270:intron 20.0%
!!! AATATAACTTTTTGGAAAAG+GGG - chr8_1:74788881-74788900 None:intergenic 20.0%
!!! TTGATTTTCTAATCATTCAT+AGG - chr8_1:74789075-74789094 None:intergenic 20.0%
!! AAACATTGCTTAAAATAATG+TGG - chr8_1:74789100-74789119 None:intergenic 20.0%
!!! AAGAAATTTTTAATCAATCC+AGG - chr8_1:74789868-74789887 None:intergenic 20.0%
!! ATGTTTGGTAATTATTGTTG+TGG + chr8_1:74786371-74786390 Msa1214270:intron 25.0%
! GTTATGAATCAGACTATTAA+TGG + chr8_1:74786433-74786452 Msa1214270:intron 25.0%
!! TTTTTCTCCTTTTTATGTGT+TGG + chr8_1:74788082-74788101 Msa1214270:intron 25.0%
! AGAAAGAAGACTTAATGTTA+TGG + chr8_1:74788158-74788177 Msa1214270:CDS 25.0%
! TTAAAACTTAGACATTACCT+TGG - chr8_1:74788382-74788401 None:intergenic 25.0%
! GTAAATGATATTGCTAACAT+TGG + chr8_1:74788424-74788443 Msa1214270:intron 25.0%
! ATATATATAAGACACAAACC+TGG - chr8_1:74788536-74788555 None:intergenic 25.0%
!! CCATGGAAAATATAACTTTT+TGG - chr8_1:74788889-74788908 None:intergenic 25.0%
!! CCAAAAAGTTATATTTTCCA+TGG + chr8_1:74788886-74788905 Msa1214270:intron 25.0%
! TAATTTCAGAGATATTTCCA+TGG - chr8_1:74788906-74788925 None:intergenic 25.0%
! CATTAATTAAGCTCCATAAA+GGG + chr8_1:74789121-74789140 Msa1214270:intron 25.0%
! ATTAATTAAGCTCCATAAAG+GGG + chr8_1:74789122-74789141 Msa1214270:intron 25.0%
!!! TTTTATTTTAGACCCCTTTA+TGG - chr8_1:74789137-74789156 None:intergenic 25.0%
! AAGAAAAACAAGAAATAAGC+TGG - chr8_1:74789412-74789431 None:intergenic 25.0%
!! TATGCTGAGTTAATTTTTGT+TGG + chr8_1:74789468-74789487 Msa1214270:intron 25.0%
!! TTTCATACTTTTGGTATTTC+TGG - chr8_1:74789602-74789621 None:intergenic 25.0%
!! CAAAAATGGTTTCATACTTT+TGG - chr8_1:74789611-74789630 None:intergenic 25.0%
! GAAATTCATACTATATTGTG+CGG + chr8_1:74789717-74789736 Msa1214270:three_prime_UTR 25.0%
! GGTTATGATTTGAGAGTTTT+TGG + chr8_1:74786397-74786416 Msa1214270:intron 30.0%
CATCATAATGATGAAAGGAA+TGG + chr8_1:74786553-74786572 Msa1214270:CDS 30.0%
CATTACCATGATCATAATCT+TGG - chr8_1:74786618-74786637 None:intergenic 30.0%
GAGCATATGCAAAATTATGA+TGG + chr8_1:74786781-74786800 Msa1214270:CDS 30.0%
!! AAAGCATTTTAGATCGTGAT+GGG + chr8_1:74787094-74787113 Msa1214270:CDS 30.0%
AAAGCATGTTAGATGATGAT+TGG + chr8_1:74787283-74787302 Msa1214270:CDS 30.0%
! TGTTCGTCAAAACTTTTATC+AGG - chr8_1:74787429-74787448 None:intergenic 30.0%
AACATAAAAAAGAACAACCG+AGG + chr8_1:74787445-74787464 Msa1214270:CDS 30.0%
ATGTCACAGAAAATTAACAG+AGG - chr8_1:74787491-74787510 None:intergenic 30.0%
GTTAATTTCCAACTGTTCTT+TGG + chr8_1:74787513-74787532 Msa1214270:intron 30.0%
TAAGTAAACCAAAGAACAGT+TGG - chr8_1:74787524-74787543 None:intergenic 30.0%
!!! CTTGTTTTTACTTGCTTTTG+TGG + chr8_1:74787758-74787777 Msa1214270:intron 30.0%
ACTGCTTGATCAACTAAAAA+AGG + chr8_1:74787817-74787836 Msa1214270:CDS 30.0%
GAATGTTTGATAAATGCGTT+AGG + chr8_1:74788000-74788019 Msa1214270:intron 30.0%
ATGCTTGGAAATAAATGAGA+AGG - chr8_1:74788207-74788226 None:intergenic 30.0%
CAATCTCAAAATTTGATGCT+TGG - chr8_1:74788222-74788241 None:intergenic 30.0%
TAAATTTCACAATGTGGCTT+AGG + chr8_1:74788643-74788662 Msa1214270:intron 30.0%
TCTATCGTCAACATAATTCA+AGG - chr8_1:74788783-74788802 None:intergenic 30.0%
GACGATAGAGAATCATTATA+TGG + chr8_1:74788794-74788813 Msa1214270:intron 30.0%
!! TTCTCTTTAAAGTGTTAGCA+CGG + chr8_1:74788953-74788972 Msa1214270:intron 30.0%
GAAAATCAATTGCATGTCAT+TGG - chr8_1:74788996-74789015 None:intergenic 30.0%
CCTTTATGGAGCTTAATTAA+TGG - chr8_1:74789123-74789142 None:intergenic 30.0%
CCATTAATTAAGCTCCATAA+AGG + chr8_1:74789120-74789139 Msa1214270:intron 30.0%
!!! TTTTTTGCCACCATAATCTA+TGG - chr8_1:74789170-74789189 None:intergenic 30.0%
AGATTATGGTGGCAAAAAAT+TGG + chr8_1:74789171-74789190 Msa1214270:intron 30.0%
GAAATGCAAAAGTAGCTATT+AGG + chr8_1:74789228-74789247 Msa1214270:intron 30.0%
! AAGTGAATTCCTTGTTATCA+AGG + chr8_1:74789251-74789270 Msa1214270:intron 30.0%
! ATTCCTTGTTATCAAGGAAA+TGG + chr8_1:74789257-74789276 Msa1214270:intron 30.0%
CAAGAAATAAGCTGGATTAT+AGG - chr8_1:74789404-74789423 None:intergenic 30.0%
!!! GTTAATTTTTGTTGGTTTGC+AGG + chr8_1:74789476-74789495 Msa1214270:intron 30.0%
AAGATGAATCTTACCATACA+TGG - chr8_1:74789686-74789705 None:intergenic 30.0%
TGTATGGTAAGATTCATCTT+TGG + chr8_1:74789686-74789705 Msa1214270:three_prime_UTR 30.0%
AAGATTATAGCAATGCTTGT+TGG - chr8_1:74789762-74789781 None:intergenic 30.0%
TTGGAAGAGAAAAAGAGTGA+AGG + chr8_1:74785877-74785896 Msa1214270:five_prime_UTR 35.0%
TTGTAACTTTCACAAACCCT+AGG + chr8_1:74786263-74786282 Msa1214270:CDS 35.0%
GATGCTATCAACGATATGAA+CGG + chr8_1:74786295-74786314 Msa1214270:CDS 35.0%
ATGATGAAAGGAATGGAGAT+TGG + chr8_1:74786560-74786579 Msa1214270:CDS 35.0%
TGATGAAAGGAATGGAGATT+GGG + chr8_1:74786561-74786580 Msa1214270:CDS 35.0%
! GATCATGGTAATGAGAAAGA+TGG + chr8_1:74786625-74786644 Msa1214270:CDS 35.0%
GTAATGAGAAAGATGGATAC+AGG + chr8_1:74786632-74786651 Msa1214270:CDS 35.0%
AAAGATGGATACAGGAATAG+AGG + chr8_1:74786640-74786659 Msa1214270:CDS 35.0%
GAACACATGCTAGATTATGA+TGG + chr8_1:74786874-74786893 Msa1214270:CDS 35.0%
!!! GAAAGCATTTTAGATCGTGA+TGG + chr8_1:74787093-74787112 Msa1214270:CDS 35.0%
GATGATGATTGGAATCATGA+CGG + chr8_1:74787294-74787313 Msa1214270:CDS 35.0%
AAAATGAACTGGAAAACAGC+AGG + chr8_1:74787328-74787347 Msa1214270:CDS 35.0%
AAATGAACTGGAAAACAGCA+GGG + chr8_1:74787329-74787348 Msa1214270:CDS 35.0%
CTGGATTCACATCTAAGTTA+CGG - chr8_1:74787380-74787399 None:intergenic 35.0%
TGTGAATCCAGACAAAAAGA+TGG + chr8_1:74787389-74787408 Msa1214270:CDS 35.0%
ATCCAGACAAAAAGATGGAA+AGG + chr8_1:74787394-74787413 Msa1214270:CDS 35.0%
! ATCCTTTCCATCTTTTTGTC+TGG - chr8_1:74787399-74787418 None:intergenic 35.0%
ATTCAAACTGCAGGAAAATC+AGG - chr8_1:74787569-74787588 None:intergenic 35.0%
ATTTGTCACATTCAAACTGC+AGG - chr8_1:74787578-74787597 None:intergenic 35.0%
AATAGTCCATCAGATTCCAA+TGG + chr8_1:74787601-74787620 Msa1214270:CDS 35.0%
ATAGTCCATCAGATTCCAAT+GGG + chr8_1:74787602-74787621 Msa1214270:CDS 35.0%
ATCACATTACCTCATCATTG+TGG - chr8_1:74787630-74787649 None:intergenic 35.0%
AGGTAGAAGATGAATTAGAG+AGG + chr8_1:74787786-74787805 Msa1214270:intron 35.0%
GCTTGATCAACTAAAAAAGG+AGG + chr8_1:74787820-74787839 Msa1214270:CDS 35.0%
TCTGAACATGTGCATTTCAA+AGG + chr8_1:74787964-74787983 Msa1214270:intron 35.0%
! TTAAAGATTAGAGCGCTTGT+TGG - chr8_1:74788055-74788074 None:intergenic 35.0%
! TTCTCCTTTTTATGTGTTGG+TGG + chr8_1:74788085-74788104 Msa1214270:intron 35.0%
! CTGAAAAGTGGAATTTTGTC+AGG + chr8_1:74788110-74788129 Msa1214270:intron 35.0%
! ATTTTGTCAGGTTTCTAAGC+TGG + chr8_1:74788122-74788141 Msa1214270:intron 35.0%
TGTGTTCAAAGTAAGGATGT+TGG - chr8_1:74788257-74788276 None:intergenic 35.0%
! CAGCTTTTGTGTTCAAAGTA+AGG - chr8_1:74788264-74788283 None:intergenic 35.0%
GAAGATATTTACCGCAGAAA+CGG + chr8_1:74788301-74788320 Msa1214270:intron 35.0%
AAGATATTTACCGCAGAAAC+GGG + chr8_1:74788302-74788321 Msa1214270:intron 35.0%
ATATTGCTAACATTGGGCTT+GGG + chr8_1:74788431-74788450 Msa1214270:intron 35.0%
!!! ACTGGTTTTAAGTCTTTCTG+TGG - chr8_1:74788502-74788521 None:intergenic 35.0%
! GAAAAATCTCTGCAGTTTTG+TGG + chr8_1:74788710-74788729 Msa1214270:intron 35.0%
!! TCTCTTTAAAGTGTTAGCAC+GGG + chr8_1:74788954-74788973 Msa1214270:intron 35.0%
CCATAATCTATGGCATAAGA+TGG - chr8_1:74789160-74789179 None:intergenic 35.0%
CCATCTTATGCCATAGATTA+TGG + chr8_1:74789157-74789176 Msa1214270:intron 35.0%
TCTTATGCCATAGATTATGG+TGG + chr8_1:74789160-74789179 Msa1214270:intron 35.0%
ACTTATGTGCGAAGTTGTAA+TGG + chr8_1:74789206-74789225 Msa1214270:intron 35.0%
AGAGATCTTTCAAATCTCAG+GGG - chr8_1:74789296-74789315 None:intergenic 35.0%
CAGAGATCTTTCAAATCTCA+GGG - chr8_1:74789297-74789316 None:intergenic 35.0%
TCAGAGATCTTTCAAATCTC+AGG - chr8_1:74789298-74789317 None:intergenic 35.0%
GAGATTTGAAAGATCTCTGA+TGG + chr8_1:74789298-74789317 Msa1214270:intron 35.0%
! TCGATTTGACCTTGTGAATA+TGG + chr8_1:74789334-74789353 Msa1214270:intron 35.0%
AAACCAAGACCATATTCACA+AGG - chr8_1:74789346-74789365 None:intergenic 35.0%
! TTGTGAATATGGTCTTGGTT+TGG + chr8_1:74789345-74789364 Msa1214270:intron 35.0%
!! CGTATTTACTTAACTTGTGC+TGG + chr8_1:74789440-74789459 Msa1214270:intron 35.0%
TCAATATTGTTCGAGAGTGA+CGG + chr8_1:74789510-74789529 Msa1214270:CDS 35.0%
CTTACAAATGGAAGTCTAGA+TGG + chr8_1:74789558-74789577 Msa1214270:CDS 35.0%
GACAACACATGGTACAAAAA+TGG - chr8_1:74789625-74789644 None:intergenic 35.0%
GCAATTAAAGAGACAACACA+TGG - chr8_1:74789636-74789655 None:intergenic 35.0%
TTGTCTCTTTAATTGCCTAG+TGG + chr8_1:74789640-74789659 Msa1214270:three_prime_UTR 35.0%
GTGAGATAGTAAAAACCACT+AGG - chr8_1:74789658-74789677 None:intergenic 35.0%
GGCTGATATGTAGAGAAAAA+AGG + chr8_1:74789842-74789861 Msa1214270:three_prime_UTR 35.0%
ATATGTAGAGAAAAAAGGCC+TGG + chr8_1:74789847-74789866 Msa1214270:three_prime_UTR 35.0%
AGAGTGAAGGAGAAAGACTA+TGG + chr8_1:74785890-74785909 Msa1214270:five_prime_UTR 40.0%
TCAGTTCCACAAAATGACAC+TGG + chr8_1:74785964-74785983 Msa1214270:exon 40.0%
GATGATAGCTCCATTTACGT+TGG + chr8_1:74785989-74786008 Msa1214270:CDS 40.0%
AGTGCGAATTGTTTCATCAG+TGG - chr8_1:74786032-74786051 None:intergenic 40.0%
CGCACTGTCTTCAATTTGTA+TGG + chr8_1:74786046-74786065 Msa1214270:CDS 40.0%
GACTACCTTGACATCAAGAA+TGG - chr8_1:74786074-74786093 None:intergenic 40.0%
ATCAATGACCAACGTACACT+TGG + chr8_1:74786226-74786245 Msa1214270:CDS 40.0%
TCAATGACCAACGTACACTT+GGG + chr8_1:74786227-74786246 Msa1214270:CDS 40.0%
TAGCATCAATTGCAGACCTA+GGG - chr8_1:74786282-74786301 None:intergenic 40.0%
ATAGCATCAATTGCAGACCT+AGG - chr8_1:74786283-74786302 None:intergenic 40.0%
TGGTAATTATTGTTGTGGCG+TGG + chr8_1:74786376-74786395 Msa1214270:intron 40.0%
GCCGTGTGGTTAAAGTTAAT+GGG + chr8_1:74786455-74786474 Msa1214270:CDS 40.0%
CCCCATTAACTTTAACCACA+CGG - chr8_1:74786459-74786478 None:intergenic 40.0%
CCGTGTGGTTAAAGTTAATG+GGG + chr8_1:74786456-74786475 Msa1214270:CDS 40.0%
TGGTTAAAGTTAATGGGGTG+AGG + chr8_1:74786461-74786480 Msa1214270:CDS 40.0%
! GTGGTGGCAGATCAAATTTT+GGG + chr8_1:74786509-74786528 Msa1214270:CDS 40.0%
CGAGACCAAGATTATGATCA+TGG + chr8_1:74786610-74786629 Msa1214270:CDS 40.0%
TTCTATCCCTATCCCTATCA+TGG - chr8_1:74786756-74786775 None:intergenic 40.0%
AAAGCATGTTAGTCCGTGAT+AGG + chr8_1:74786815-74786834 Msa1214270:CDS 40.0%
CAAGCTAGAGCAAGTATGTT+AGG + chr8_1:74786898-74786917 Msa1214270:CDS 40.0%
TTCTATCCCTATCCCTATCA+TGG - chr8_1:74786756-74786775 None:intergenic 40.0%
! CAACTTTTATACCCCTGTCA+CGG - chr8_1:74787041-74787060 None:intergenic 40.0%
AGAAGAGTTGAGCATTTGCA+AGG + chr8_1:74787144-74787163 Msa1214270:CDS 40.0%
TATCCCTAACCATGATGTCA+CGG - chr8_1:74787221-74787240 None:intergenic 40.0%
ATTGGAATCATGACGGTGAT+AGG + chr8_1:74787301-74787320 Msa1214270:CDS 40.0%
TTGGAATCATGACGGTGATA+GGG + chr8_1:74787302-74787321 Msa1214270:CDS 40.0%
TGATAGGGCTGAAAATGAAC+TGG + chr8_1:74787317-74787336 Msa1214270:CDS 40.0%
TCTTACTCGATGTTTCTCCT+CGG - chr8_1:74787465-74787484 None:intergenic 40.0%
TAGTCCATCAGATTCCAATG+GGG + chr8_1:74787603-74787622 Msa1214270:CDS 40.0%
AAATGTGGCAGAATCAGTCT+CGG - chr8_1:74787734-74787753 None:intergenic 40.0%
!! TACTTGCTTTTGTGGTCTTC+AGG + chr8_1:74787766-74787785 Msa1214270:intron 40.0%
AGCACCACCAACACATAAAA+AGG - chr8_1:74788092-74788111 None:intergenic 40.0%
!! GGAGTTACAAAAGCACTCTA+AGG + chr8_1:74788179-74788198 Msa1214270:CDS 40.0%
GATATTGCTAACATTGGGCT+TGG + chr8_1:74788430-74788449 Msa1214270:intron 40.0%
AGAAAACATTCATGCAGCTG+AGG - chr8_1:74788465-74788484 None:intergenic 40.0%
AACCAGTGAAAAAGAACTCC+AGG + chr8_1:74788515-74788534 Msa1214270:CDS 40.0%
!! AACCTGGAGTTCTTTTTCAC+TGG - chr8_1:74788520-74788539 None:intergenic 40.0%
TATATGGTGCAGTTGTATGC+AGG + chr8_1:74788810-74788829 Msa1214270:intron 40.0%
! GCACGGGTATTTGTATTTTG+AGG + chr8_1:74788970-74788989 Msa1214270:intron 40.0%
! CAGCCATTTCCTTGATAACA+AGG - chr8_1:74789263-74789282 None:intergenic 40.0%
TGACCTTGTGAATATGGTCT+TGG + chr8_1:74789340-74789359 Msa1214270:intron 40.0%
GGTCTTGGACAACTTACAAA+TGG + chr8_1:74789546-74789565 Msa1214270:CDS 40.0%
TATCTCACTAGCTCCATGTA+TGG + chr8_1:74789670-74789689 Msa1214270:three_prime_UTR 40.0%
TTAGCATATGGCATCTTACC+TGG + chr8_1:74789820-74789839 Msa1214270:three_prime_UTR 40.0%
TAGCATATGGCATCTTACCT+GGG + chr8_1:74789821-74789840 Msa1214270:three_prime_UTR 40.0%
! TTTTCTCTACATATCAGCCC+AGG - chr8_1:74789841-74789860 None:intergenic 40.0%
!!! CATCGTCCAGTGTCATTTTG+TGG - chr8_1:74785973-74785992 None:intergenic 45.0%
GATAGCTCCATTTACGTTGG+TGG + chr8_1:74785992-74786011 Msa1214270:CDS 45.0%
AGCATTTCCCAAGTGTACGT+TGG - chr8_1:74786237-74786256 None:intergenic 45.0%
TCAGACTATTAATGGCCGTG+TGG + chr8_1:74786441-74786460 Msa1214270:intron 45.0%
GGCCGTGTGGTTAAAGTTAA+TGG + chr8_1:74786454-74786473 Msa1214270:CDS 45.0%
!! GGTGGTGGCAGATCAAATTT+TGG + chr8_1:74786508-74786527 Msa1214270:CDS 45.0%
ACAGGAATAGAGGCAGTGAT+TGG + chr8_1:74786650-74786669 Msa1214270:CDS 45.0%
ATAGGTCTCGAGACCATGAT+AGG + chr8_1:74786740-74786759 Msa1214270:CDS 45.0%
TAGGTCTCGAGACCATGATA+GGG + chr8_1:74786741-74786760 Msa1214270:CDS 45.0%
TCGAGACCATGATAGGGATA+GGG + chr8_1:74786747-74786766 Msa1214270:CDS 45.0%
TTCTATCCCTATCCCTGTCA+CGG - chr8_1:74786849-74786868 None:intergenic 45.0%
ATAGATCCCGAGACCATGAT+AGG + chr8_1:74786926-74786945 Msa1214270:CDS 45.0%
TAGATCCCGAGACCATGATA+GGG + chr8_1:74786927-74786946 Msa1214270:CDS 45.0%
AAAGCGTGTTAGACCGTGAT+AGG + chr8_1:74787001-74787020 Msa1214270:CDS 45.0%
TTCTGCTCCTATCTCTGTCA+CGG - chr8_1:74787128-74787147 None:intergenic 45.0%
AAAGCATGTTAGACCGCGAT+GGG + chr8_1:74787187-74787206 Msa1214270:CDS 45.0%
TAACCATGATGTCACGGTCT+CGG - chr8_1:74787215-74787234 None:intergenic 45.0%
AGACCGTGACATCATGGTTA+GGG + chr8_1:74787215-74787234 Msa1214270:CDS 45.0%
TCAGGTTTCTAAGCTGGAAG+AGG + chr8_1:74788128-74788147 Msa1214270:intron 45.0%
CAGGTTTCTAAGCTGGAAGA+GGG + chr8_1:74788129-74788148 Msa1214270:intron 45.0%
TTCTAAGCTGGAAGAGGGAT+TGG + chr8_1:74788134-74788153 Msa1214270:CDS 45.0%
ATATTTACCGCAGAAACGGG+AGG + chr8_1:74788305-74788324 Msa1214270:intron 45.0%
TTACCTTGGTCAACTGCATC+TGG - chr8_1:74788368-74788387 None:intergenic 45.0%
!! TAAAAAAAAATACAATAATA+TGG - chr8_1:74786337-74786356 None:intergenic 5.0%
!! AAAGTAAAATTAATAATAAA+TGG - chr8_1:74788744-74788763 None:intergenic 5.0%
GGGAAGACCACCAACGTAAA+TGG - chr8_1:74786002-74786021 None:intergenic 50.0%
! GTTTCATCAGTGGCGTCGAA+GGG - chr8_1:74786022-74786041 None:intergenic 50.0%
! TGTTTCATCAGTGGCGTCGA+AGG - chr8_1:74786023-74786042 None:intergenic 50.0%
TGGCGCCATTCTTGATGTCA+AGG + chr8_1:74786066-74786085 Msa1214270:CDS 50.0%
AGGAATGGAGATTGGGATCG+TGG + chr8_1:74786568-74786587 Msa1214270:CDS 50.0%
AATGGAGATTGGGATCGTGG+CGG + chr8_1:74786571-74786590 Msa1214270:CDS 50.0%
ATTGGACCAGAGGTGGTGAT+TGG + chr8_1:74786668-74786687 Msa1214270:CDS 50.0%
ATTGGACTCGACAGCATCAG+AGG + chr8_1:74786686-74786705 Msa1214270:CDS 50.0%
CATGGTCTCGAGACCTATCA+CGG - chr8_1:74786738-74786757 None:intergenic 50.0%
CTCGAGACCATGATAGGGAT+AGG + chr8_1:74786746-74786765 Msa1214270:CDS 50.0%
CCTATCCCTATCATGGTCTC+GGG - chr8_1:74786749-74786768 None:intergenic 50.0%
CCCTATCCCTATCATGGTCT+CGG - chr8_1:74786750-74786769 None:intergenic 50.0%
CCGAGACCATGATAGGGATA+GGG + chr8_1:74786933-74786952 Msa1214270:CDS 50.0%
TTATACCCCTGTCACGGTCA+CGG - chr8_1:74787035-74787054 None:intergenic 50.0%
TCCTATCTCTGTCACGGTCT+CGG - chr8_1:74787122-74787141 None:intergenic 50.0%
! GAAAGCATGTTAGACCGCGA+TGG + chr8_1:74787186-74787205 Msa1214270:CDS 50.0%
AACCATGATGTCACGGTCTC+GGG - chr8_1:74787214-74787233 None:intergenic 50.0%
GAGACCGTGACATCATGGTT+AGG + chr8_1:74787214-74787233 Msa1214270:CDS 50.0%
ACTGGAAAACAGCAGGGTAC+AGG + chr8_1:74787335-74787354 Msa1214270:CDS 50.0%
CTGGAAAACAGCAGGGTACA+GGG + chr8_1:74787336-74787355 Msa1214270:CDS 50.0%
ACAGGGTGGAGATGTGGATA+AGG + chr8_1:74787353-74787372 Msa1214270:CDS 50.0%
TGGTCCCCATTGGAATCTGA+TGG - chr8_1:74787610-74787629 None:intergenic 50.0%
CTCATCATTGTGGTCCCCAT+TGG - chr8_1:74787620-74787639 None:intergenic 50.0%
CAATGGGGACCACAATGATG+AGG + chr8_1:74787618-74787637 Msa1214270:CDS 50.0%
! ATGGCGATGTCTGCTCTAGA+AGG + chr8_1:74787893-74787912 Msa1214270:intron 50.0%
!! GTGTTGGTGGTGCTGAAAAG+TGG + chr8_1:74788098-74788117 Msa1214270:intron 50.0%
TTGTTCGAGAGTGACGGTGA+TGG + chr8_1:74789516-74789535 Msa1214270:CDS 50.0%
GTTAATGGGGTGAGGTCTCG+TGG + chr8_1:74786469-74786488 Msa1214270:CDS 55.0%
AGAGGCAGTGATTGGACCAG+AGG + chr8_1:74786658-74786677 Msa1214270:CDS 55.0%
TCGAGTCCAATCACCACCTC+TGG - chr8_1:74786677-74786696 None:intergenic 55.0%
AGAGGTCTCGAGACCGTGAT+AGG + chr8_1:74786704-74786723 Msa1214270:CDS 55.0%
CCCGAGACCATGATAGGGAT+AGG + chr8_1:74786932-74786951 Msa1214270:CDS 55.0%
CCTATCTCTGTCACGGTCTC+GGG - chr8_1:74787121-74787140 None:intergenic 55.0%
GAAAACAGCAGGGTACAGGG+TGG + chr8_1:74787339-74787358 Msa1214270:CDS 55.0%
ACAGCATCCTCCCGTTTCTG+CGG - chr8_1:74788315-74788334 None:intergenic 55.0%
TCGCCAGATGCAGTTGACCA+AGG + chr8_1:74788362-74788381 Msa1214270:CDS 55.0%
! GAGAGTGACGGTGATGGTGA+TGG + chr8_1:74789522-74789541 Msa1214270:CDS 55.0%
!! AGTGACGGTGATGGTGATGG+TGG + chr8_1:74789525-74789544 Msa1214270:CDS 55.0%
!! GGTGATGGTGATGGTGGTCT+TGG + chr8_1:74789531-74789550 Msa1214270:CDS 55.0%
AATGGGGTGAGGTCTCGTGG+CGG + chr8_1:74786472-74786491 Msa1214270:CDS 60.0%
GGCAGTGATTGGACCAGAGG+TGG + chr8_1:74786661-74786680 Msa1214270:CDS 60.0%
ATAGGTCCCGCGACCGTGAT+AGG + chr8_1:74786722-74786741 Msa1214270:CDS 60.0%
TCGAGACCTATCACGGTCGC+GGG - chr8_1:74786731-74786750 None:intergenic 60.0%
CTCGAGACCTATCACGGTCG+CGG - chr8_1:74786732-74786751 None:intergenic 60.0%
CACGGTCTCGGGACCTATCA+CGG - chr8_1:74786831-74786850 None:intergenic 60.0%
ATAGGTCCCGAGACCGTGAC+AGG + chr8_1:74786833-74786852 Msa1214270:CDS 60.0%
TAGGTCCCGAGACCGTGACA+GGG + chr8_1:74786834-74786853 Msa1214270:CDS 60.0%
CCTATCCCTGTCACGGTCTC+GGG - chr8_1:74786842-74786861 None:intergenic 60.0%
CCCTATCCCTGTCACGGTCT+CGG - chr8_1:74786843-74786862 None:intergenic 60.0%
CCGAGACCGTGACAGGGATA+GGG + chr8_1:74786840-74786859 Msa1214270:CDS 60.0%
CACGGTCTCGGGACCTATCA+CGG - chr8_1:74786831-74786850 None:intergenic 60.0%
CCCGAGACCGTGACAGAGAT+AGG + chr8_1:74787118-74787137 Msa1214270:CDS 60.0%
GTCCCGAGACCGTGACATCA+TGG + chr8_1:74787209-74787228 Msa1214270:CDS 60.0%
CAGGGTACAGGGTGGAGATG+TGG + chr8_1:74787347-74787366 Msa1214270:CDS 60.0%
CACGGTCGCGGGACCTATCA+CGG - chr8_1:74786720-74786739 None:intergenic 65.0%
CCCGAGACCGTGACAGGGAT+AGG + chr8_1:74786839-74786858 Msa1214270:CDS 65.0%
CCTGTCACGGTCACGGTCTC+GGG - chr8_1:74787028-74787047 None:intergenic 65.0%
CCCTGTCACGGTCACGGTCT+CGG - chr8_1:74787029-74787048 None:intergenic 65.0%
CCGAGACCGTGACCGTGACA+GGG + chr8_1:74787026-74787045 Msa1214270:CDS 65.0%
CGAGACCGTGACCGTGACAG+GGG + chr8_1:74787027-74787046 Msa1214270:CDS 65.0%
GTGAGGTCTCGTGGCGGTGG+AGG + chr8_1:74786478-74786497 Msa1214270:CDS 70.0%
AGGTCTCGTGGCGGTGGAGG+TGG + chr8_1:74786481-74786500 Msa1214270:CDS 70.0%
TCTCGTGGCGGTGGAGGTGG+CGG + chr8_1:74786484-74786503 Msa1214270:CDS 70.0%
CCCGAGACCGTGACCGTGAC+AGG + chr8_1:74787025-74787044 Msa1214270:CDS 70.0%
CACGGTCTCGGGACCCATCG+CGG - chr8_1:74787203-74787222 None:intergenic 70.0%
GGGGTGAGGTCTCGTGGCGG+TGG + chr8_1:74786475-74786494 Msa1214270:CDS 75.0%
!! CGTGGCGGTGGAGGTGGCGG+CGG + chr8_1:74786487-74786506 Msa1214270:CDS 80.0%
!! GGTGGAGGTGGCGGCGGTGG+TGG + chr8_1:74786493-74786512 Msa1214270:CDS 80.0%
!! GGCGGTGGAGGTGGCGGCGG+TGG + chr8_1:74786490-74786509 Msa1214270:CDS 85.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 74785871 74789907 74785871 ID=Msa1214270;Name=Msa1214270
chr8_1 mRNA 74785871 74789907 74785871 ID=Msa1214270-mRNA-1;Parent=Msa1214270;Name=Msa1214270-mRNA-1;_AED=0.11;_eAED=0.11;_QI=106|1|0.88|1|1|1|9|320|549
chr8_1 exon 74785871 74786087 74785871 ID=Msa1214270-mRNA-1:exon:25669;Parent=Msa1214270-mRNA-1
chr8_1 exon 74786223 74786321 74786223 ID=Msa1214270-mRNA-1:exon:25670;Parent=Msa1214270-mRNA-1
chr8_1 exon 74786445 74787478 74786445 ID=Msa1214270-mRNA-1:exon:25671;Parent=Msa1214270-mRNA-1
chr8_1 exon 74787582 74787639 74787582 ID=Msa1214270-mRNA-1:exon:25672;Parent=Msa1214270-mRNA-1
chr8_1 exon 74787788 74787841 74787788 ID=Msa1214270-mRNA-1:exon:25673;Parent=Msa1214270-mRNA-1
chr8_1 exon 74788132 74788200 74788132 ID=Msa1214270-mRNA-1:exon:25674;Parent=Msa1214270-mRNA-1
chr8_1 exon 74788318 74788383 74788318 ID=Msa1214270-mRNA-1:exon:25675;Parent=Msa1214270-mRNA-1
chr8_1 exon 74788468 74788536 74788468 ID=Msa1214270-mRNA-1:exon:25676;Parent=Msa1214270-mRNA-1
chr8_1 exon 74789498 74789907 74789498 ID=Msa1214270-mRNA-1:exon:25677;Parent=Msa1214270-mRNA-1
chr8_1 five_prime_UTR 74785871 74785976 74785871 ID=Msa1214270-mRNA-1:five_prime_utr;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74785977 74786087 74785977 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74786223 74786321 74786223 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74786445 74787478 74786445 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74787582 74787639 74787582 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74787788 74787841 74787788 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74788132 74788200 74788132 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74788318 74788383 74788318 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74788468 74788536 74788468 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 CDS 74789498 74789587 74789498 ID=Msa1214270-mRNA-1:cds;Parent=Msa1214270-mRNA-1
chr8_1 three_prime_UTR 74789588 74789907 74789588 ID=Msa1214270-mRNA-1:three_prime_utr;Parent=Msa1214270-mRNA-1
Gene Sequence

>Msa1214270

ATGACACTGGACGATGATAGCTCCATTTACGTTGGTGGTCTTCCCTTCGACGCCACTGATGAAACAATTCGCACTGTCTTCAATTTGTATGGCGCCATTCTTGATGTCAAGATTATCAATGACCAACGTACACTTGGGAAATGCTATTGTTTTGTAACTTTCACAAACCCTAGGTCTGCAATTGATGCTATCAACGATATGAACGGAAGAACTATTAATGGCCGTGTGGTTAAAGTTAATGGGGTGAGGTCTCGTGGCGGTGGAGGTGGCGGCGGTGGTGGCAGATCAAATTTTGGGAGAGAAAGAGAACGTTATTATCATCATAATGATGAAAGGAATGGAGATTGGGATCGTGGCGGCAGAGATCGAGAGATTCGAGACCAAGATTATGATCATGGTAATGAGAAAGATGGATACAGGAATAGAGGCAGTGATTGGACCAGAGGTGGTGATTGGACTCGACAGCATCAGAGGTCTCGAGACCGTGATAGGTCCCGCGACCGTGATAGGTCTCGAGACCATGATAGGGATAGGGATAGAAGAGTCGAGCATATGCAAAATTATGATGGTCTAGCTAGAGAAAGCATGTTAGTCCGTGATAGGTCCCGAGACCGTGACAGGGATAGGGATAGAAGAGTTGAACACATGCTAGATTATGATGGTCAAGCTAGAGCAAGTATGTTAGGTCGTGATAGATCCCGAGACCATGATAGGGATAGGGATAGAAGAGTTGAACATATGCAAGATTATGATGATCAAGCTAGAGAAAGCGTGTTAGACCGTGATAGGTCCCGAGACCGTGACCGTGACAGGGGTATAAAAGTTGAGCATTTGCAAGATTATGATGATCAAGCTAGAGAAAGCATTTTAGATCGTGATGGGTCCCGAGACCGTGACAGAGATAGGAGCAGAAGAGTTGAGCATTTGCAAGGTTATGATGATCAAGCTAGAGAAAGCATGTTAGACCGCGATGGGTCCCGAGACCGTGACATCATGGTTAGGGATAGAAGAGTTGAACATTTGCAAGATTATGATGATCAACATAGAGAAAGCATGTTAGATGATGATTGGAATCATGACGGTGATAGGGCTGAAAATGAACTGGAAAACAGCAGGGTACAGGGTGGAGATGTGGATAAGGACCGTAACTTAGATGTGAATCCAGACAAAAAGATGGAAAGGATTAGTGATCCTGATAAAAGTTTTGACGAACATAAAAAAGAACAACCGAGGAGAAACATCGATTTGAATGTGACAAATCAAAATAGTCCATCAGATTCCAATGGGGACCACAATGATGAGGTAGAAGATGAATTAGAGAGGTCAATTCAACTGCTTGATCAACTAAAAAAGGAGGTTTCTAAGCTGGAAGAGGGATTGGAAGAAAGAAGACTTAATGTTATGGAGTTACAAAAGCACTCTAAGAAACGGGAGGATGCTGTGATTACTGCAAAGAAAAAATCTTTATATCGCCAGATGCAGTTGACCAAGCTGCATGAATGTTTTCTGCAAGTGCACGATTCCACAGAAAGACTTAAAACCAGTGAAAAAGAACTCCAGGCTCTAGTTGAATCAATATTGTTCGAGAGTGACGGTGATGGTGATGGTGGTCTTGGACAACTTACAAATGGAAGTCTAGATGGTAGATAG

Protein sequence

>Msa1214270

MTLDDDSSIYVGGLPFDATDETIRTVFNLYGAILDVKIINDQRTLGKCYCFVTFTNPRSAIDAINDMNGRTINGRVVKVNGVRSRGGGGGGGGGRSNFGRERERYYHHNDERNGDWDRGGRDREIRDQDYDHGNEKDGYRNRGSDWTRGGDWTRQHQRSRDRDRSRDRDRSRDHDRDRDRRVEHMQNYDGLARESMLVRDRSRDRDRDRDRRVEHMLDYDGQARASMLGRDRSRDHDRDRDRRVEHMQDYDDQARESVLDRDRSRDRDRDRGIKVEHLQDYDDQARESILDRDGSRDRDRDRSRRVEHLQGYDDQARESMLDRDGSRDRDIMVRDRRVEHLQDYDDQHRESMLDDDWNHDGDRAENELENSRVQGGDVDKDRNLDVNPDKKMERISDPDKSFDEHKKEQPRRNIDLNVTNQNSPSDSNGDHNDEVEDELERSIQLLDQLKKEVSKLEEGLEERRLNVMELQKHSKKREDAVITAKKKSLYRQMQLTKLHECFLQVHDSTERLKTSEKELQALVESILFESDGDGDGGLGQLTNGSLDGR*