Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271270 | XP_013443756.1 | 94.760 | 458 | 24 | 0 | 1 | 458 | 1 | 458 | 0.0 | 887 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271270 | sp|Q9SD53|Y3720_ARATH | 28.090 | 445 | 265 | 13 | 18 | 442 | 37 | 446 | 2.65e-37 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271270 | A0A072TKP8 | 94.760 | 458 | 24 | 0 | 1 | 458 | 1 | 458 | 0.0 | 887 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1271270 | 0.818822 | 1.603539e-52 | -8.615850e-47 |
| Msa0001940 | Msa1271270 | 0.814734 | 1.324701e-51 | -8.615850e-47 |
| Msa0002580 | Msa1271270 | 0.818814 | 1.610908e-52 | -8.615850e-47 |
| Msa0017950 | Msa1271270 | 0.816359 | 5.759785e-52 | -8.615850e-47 |
| Msa0034810 | Msa1271270 | 0.827171 | 1.812751e-54 | -8.615850e-47 |
| Msa0035060 | Msa1271270 | 0.816665 | 4.919747e-52 | -8.615850e-47 |
| Msa0042610 | Msa1271270 | 0.807524 | 4.846772e-50 | -8.615850e-47 |
| Msa0081520 | Msa1271270 | 0.803127 | 4.043745e-49 | -8.615850e-47 |
| Msa0098040 | Msa1271270 | 0.810530 | 1.101285e-50 | -8.615850e-47 |
| Msa0611210 | Msa1271270 | 0.833136 | 6.341459e-56 | -8.615850e-47 |
| Msa0626450 | Msa1271270 | 0.807295 | 5.419255e-50 | -8.615850e-47 |
| Msa0626490 | Msa1271270 | 0.804017 | 2.643510e-49 | -8.615850e-47 |
| Msa0651550 | Msa1271270 | 0.839653 | 1.393480e-57 | -8.615850e-47 |
| Msa0664600 | Msa1271270 | 0.802137 | 6.470958e-49 | -8.615850e-47 |
| Msa0717890 | Msa1271270 | 0.803705 | 3.068098e-49 | -8.615850e-47 |
| Msa0795870 | Msa1271270 | 0.800393 | 1.471885e-48 | -8.615850e-47 |
| Msa0829300 | Msa1271270 | 0.812784 | 3.561742e-51 | -8.615850e-47 |
| Msa0829330 | Msa1271270 | 0.816640 | 4.982921e-52 | -8.615850e-47 |
| Msa0832120 | Msa1271270 | 0.809197 | 2.131409e-50 | -8.615850e-47 |
| Msa0833530 | Msa1271270 | 0.825279 | 5.111167e-54 | -8.615850e-47 |
| Msa0833650 | Msa1271270 | 0.801276 | 9.720897e-49 | -8.615850e-47 |
| Msa0129940 | Msa1271270 | 0.813143 | 2.971944e-51 | -8.615850e-47 |
| Msa0173690 | Msa1271270 | 0.806821 | 6.829752e-50 | -8.615850e-47 |
| Msa0221000 | Msa1271270 | 0.850313 | 1.840722e-60 | -8.615850e-47 |
| Msa0221470 | Msa1271270 | 0.803238 | 3.835462e-49 | -8.615850e-47 |
| Msa0223080 | Msa1271270 | 0.810519 | 1.107176e-50 | -8.615850e-47 |
| Msa0225100 | Msa1271270 | 0.819900 | 9.109197e-53 | -8.615850e-47 |
| Msa0225860 | Msa1271270 | 0.807846 | 4.140040e-50 | -8.615850e-47 |
| Msa1228200 | Msa1271270 | 0.885732 | 6.307112e-72 | -8.615850e-47 |
| Msa1232700 | Msa1271270 | 0.803104 | 4.087789e-49 | -8.615850e-47 |
| Msa1239920 | Msa1271270 | 0.801906 | 7.216686e-49 | -8.615850e-47 |
| Msa1265650 | Msa1271270 | 0.818116 | 2.318797e-52 | -8.615850e-47 |
| Msa1271270 | Msa1277220 | 0.829722 | 4.390933e-55 | -8.615850e-47 |
| Msa1271270 | Msa1297230 | 0.852186 | 5.444247e-61 | -8.615850e-47 |
| Msa1271270 | Msa1298370 | 0.801956 | 7.049314e-49 | -8.615850e-47 |
| Msa1271270 | Msa1303560 | 0.814180 | 1.757059e-51 | -8.615850e-47 |
| Msa1271270 | Msa1303650 | 0.809548 | 1.791816e-50 | -8.615850e-47 |
| Msa1271270 | Msa1314650 | 0.821352 | 4.225519e-53 | -8.615850e-47 |
| Msa1271270 | Msa1333480 | 0.804581 | 2.017038e-49 | -8.615850e-47 |
| Msa1271270 | Msa1343430 | 0.853119 | 2.949585e-61 | -8.615850e-47 |
| Msa1271270 | Msa1357790 | 0.811399 | 7.137597e-51 | -8.615850e-47 |
| Msa1271270 | Msa1373100 | 0.828188 | 1.032699e-54 | -8.615850e-47 |
| Msa1271270 | Msa1385890 | 0.833918 | 4.046077e-56 | -8.615850e-47 |
| Msa1271270 | Msa1393570 | 0.810115 | 1.353523e-50 | -8.615850e-47 |
| Msa1271270 | Msa1422950 | 0.828329 | 9.552568e-55 | -8.615850e-47 |
| Msa1271270 | Msa1425880 | 0.845549 | 3.788619e-59 | -8.615850e-47 |
| Msa1271270 | Msa1432500 | 0.804157 | 2.471838e-49 | -8.615850e-47 |
| Msa1271270 | Msa1440310 | 0.843600 | 1.268037e-58 | -8.615850e-47 |
| Msa1271270 | Msa1444510 | 0.803712 | 3.058121e-49 | -8.615850e-47 |
| Msa1271270 | Msa1446820 | 0.804083 | 2.561397e-49 | -8.615850e-47 |
| Msa1271270 | Msa1451160 | 0.800480 | 1.412932e-48 | -8.615850e-47 |
| Msa1271270 | Msa1464810 | 0.822046 | 2.920883e-53 | -8.615850e-47 |
| Msa0365100 | Msa1271270 | 0.834173 | 3.493434e-56 | -8.615850e-47 |
| Msa0376630 | Msa1271270 | 0.824482 | 7.882877e-54 | -8.615850e-47 |
| Msa0378720 | Msa1271270 | 0.829423 | 5.190866e-55 | -8.615850e-47 |
| Msa0406770 | Msa1271270 | 0.820534 | 6.519107e-53 | -8.615850e-47 |
| Msa0425170 | Msa1271270 | 0.823474 | 1.358825e-53 | -8.615850e-47 |
| Msa0427100 | Msa1271270 | 0.814692 | 1.353900e-51 | -8.615850e-47 |
| Msa0427120 | Msa1271270 | 0.821467 | 3.975875e-53 | -8.615850e-47 |
| Msa0428370 | Msa1271270 | 0.821503 | 3.900681e-53 | -8.615850e-47 |
| Msa0428920 | Msa1271270 | 0.833311 | 5.735811e-56 | -8.615850e-47 |
| Msa0436910 | Msa1271270 | 0.808341 | 3.247871e-50 | -8.615850e-47 |
| Msa0471670 | Msa1271270 | 0.823505 | 1.335888e-53 | -8.615850e-47 |
| Msa0474730 | Msa1271270 | 0.817679 | 2.909306e-52 | -8.615850e-47 |
| Msa0479170 | Msa1271270 | 0.832292 | 1.027136e-55 | -8.615850e-47 |
| Msa0479200 | Msa1271270 | 0.811855 | 5.681880e-51 | -8.615850e-47 |
| Msa1004840 | Msa1271270 | 0.801528 | 8.628348e-49 | -8.615850e-47 |
| Msa1019430 | Msa1271270 | 0.805365 | 1.383017e-49 | -8.615850e-47 |
| Msa1019470 | Msa1271270 | 0.818354 | 2.048333e-52 | -8.615850e-47 |
| Msa1039020 | Msa1271270 | 0.802203 | 6.272341e-49 | -8.615850e-47 |
| Msa0240900 | Msa1271270 | 0.822452 | 2.350853e-53 | -8.615850e-47 |
| Msa0244640 | Msa1271270 | 0.821868 | 3.210877e-53 | -8.615850e-47 |
| Msa0263060 | Msa1271270 | 0.813438 | 2.559168e-51 | -8.615850e-47 |
| Msa0266180 | Msa1271270 | 0.821958 | 3.060407e-53 | -8.615850e-47 |
| Msa0267920 | Msa1271270 | 0.807306 | 5.391257e-50 | -8.615850e-47 |
| Msa0283330 | Msa1271270 | 0.823411 | 1.405298e-53 | -8.615850e-47 |
| Msa0287740 | Msa1271270 | 0.823263 | 1.522248e-53 | -8.615850e-47 |
| Msa0300270 | Msa1271270 | 0.857024 | 2.163399e-62 | -8.615850e-47 |
| Msa0300320 | Msa1271270 | 0.839837 | 1.247950e-57 | -8.615850e-47 |
| Msa0302160 | Msa1271270 | 0.808234 | 3.423378e-50 | -8.615850e-47 |
| Msa0315690 | Msa1271270 | 0.801120 | 1.045974e-48 | -8.615850e-47 |
| Msa0321620 | Msa1271270 | 0.811273 | 7.600924e-51 | -8.615850e-47 |
| Msa0337700 | Msa1271270 | 0.851692 | 7.523091e-61 | -8.615850e-47 |
| Msa0339490 | Msa1271270 | 0.809613 | 1.735125e-50 | -8.615850e-47 |
| Msa0360210 | Msa1271270 | 0.822222 | 2.659318e-53 | -8.615850e-47 |
| Msa1123380 | Msa1271270 | 0.802093 | 6.607106e-49 | -8.615850e-47 |
| Msa1124950 | Msa1271270 | 0.821817 | 3.299697e-53 | -8.615850e-47 |
| Msa1132840 | Msa1271270 | 0.802968 | 4.361937e-49 | -8.615850e-47 |
| Msa1167330 | Msa1271270 | 0.805929 | 1.052833e-49 | -8.615850e-47 |
| Msa1186020 | Msa1271270 | 0.825965 | 3.515415e-54 | -8.615850e-47 |
| Msa1205280 | Msa1271270 | 0.813615 | 2.340681e-51 | -8.615850e-47 |
| Msa1218450 | Msa1271270 | 0.821738 | 3.441422e-53 | -8.615850e-47 |
| Msa0572840 | Msa1271270 | 0.820495 | 6.657220e-53 | -8.615850e-47 |
| Msa0581470 | Msa1271270 | 0.818653 | 1.752150e-52 | -8.615850e-47 |
| Msa0590830 | Msa1271270 | 0.801380 | 9.253862e-49 | -8.615850e-47 |
| Msa0597790 | Msa1271270 | 0.823360 | 1.444583e-53 | -8.615850e-47 |
| Msa0902510 | Msa1271270 | 0.815946 | 7.124856e-52 | -8.615850e-47 |
| Msa0945630 | Msa1271270 | 0.804315 | 2.291935e-49 | -8.615850e-47 |
| Msa0967380 | Msa1271270 | 0.809137 | 2.195388e-50 | -8.615850e-47 |
| Msa0967870 | Msa1271270 | 0.824650 | 7.197168e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271270 | MtrunA17_Chr8g0335021 | 94.760 | 458 | 24 | 0 | 1 | 458 | 1 | 458 | 0.0 | 887 |
| Msa1271270 | MtrunA17_Chr8g0335071 | 60.131 | 459 | 164 | 10 | 4 | 455 | 13 | 459 | 0.0 | 526 |
| Msa1271270 | MtrunA17_Chr8g0334971 | 52.876 | 452 | 194 | 7 | 8 | 455 | 8 | 444 | 1.96e-157 | 453 |
| Msa1271270 | MtrunA17_Chr8g0335061 | 50.655 | 458 | 206 | 7 | 1 | 454 | 1 | 442 | 7.81e-157 | 451 |
| Msa1271270 | MtrunA17_Chr8g0334951 | 47.640 | 445 | 199 | 10 | 9 | 449 | 11 | 425 | 4.40e-132 | 388 |
| Msa1271270 | MtrunA17_Chr8g0334911 | 48.770 | 447 | 195 | 11 | 8 | 449 | 9 | 426 | 8.56e-131 | 385 |
| Msa1271270 | MtrunA17_Chr8g0335011 | 45.030 | 493 | 211 | 13 | 9 | 455 | 19 | 497 | 1.08e-129 | 384 |
| Msa1271270 | MtrunA17_Chr4g0062011 | 85.271 | 129 | 18 | 1 | 151 | 279 | 3 | 130 | 5.57e-73 | 226 |
| Msa1271270 | MtrunA17_Chr6g0457371 | 36.145 | 415 | 212 | 15 | 28 | 438 | 26 | 391 | 3.09e-66 | 218 |
| Msa1271270 | MtrunA17_Chr6g0452561 | 33.185 | 449 | 253 | 14 | 9 | 446 | 7 | 419 | 2.25e-64 | 213 |
| Msa1271270 | MtrunA17_Chr6g0452551 | 33.486 | 436 | 229 | 13 | 19 | 441 | 10 | 397 | 3.44e-64 | 213 |
| Msa1271270 | MtrunA17_Chr6g0452601 | 33.484 | 442 | 238 | 13 | 17 | 446 | 15 | 412 | 6.19e-64 | 212 |
| Msa1271270 | MtrunA17_Chr6g0452611 | 32.857 | 420 | 229 | 10 | 25 | 438 | 22 | 394 | 7.10e-62 | 206 |
| Msa1271270 | MtrunA17_Chr6g0452531 | 33.971 | 418 | 228 | 12 | 25 | 438 | 23 | 396 | 1.63e-61 | 206 |
| Msa1271270 | MtrunA17_Chr6g0452501 | 33.333 | 417 | 232 | 9 | 25 | 438 | 23 | 396 | 6.26e-61 | 204 |
| Msa1271270 | MtrunA17_Chr3g0138001 | 33.410 | 437 | 244 | 11 | 9 | 437 | 8 | 405 | 5.19e-58 | 199 |
| Msa1271270 | MtrunA17_Chr3g0118601 | 30.603 | 464 | 254 | 12 | 9 | 446 | 22 | 443 | 5.92e-58 | 197 |
| Msa1271270 | MtrunA17_Chr6g0452161 | 34.192 | 427 | 233 | 15 | 20 | 437 | 18 | 405 | 1.02e-57 | 196 |
| Msa1271270 | MtrunA17_Chr6g0452591 | 32.414 | 435 | 238 | 14 | 20 | 446 | 48 | 434 | 1.26e-57 | 196 |
| Msa1271270 | MtrunA17_Chr7g0265891 | 28.668 | 443 | 264 | 15 | 1 | 429 | 23 | 427 | 7.42e-44 | 160 |
| Msa1271270 | MtrunA17_Chr5g0439641 | 28.510 | 463 | 257 | 15 | 25 | 455 | 30 | 450 | 7.91e-44 | 159 |
| Msa1271270 | MtrunA17_Chr5g0401791 | 30.490 | 469 | 249 | 15 | 7 | 433 | 74 | 507 | 5.98e-43 | 159 |
| Msa1271270 | MtrunA17_Chr2g0296801 | 30.412 | 388 | 218 | 10 | 64 | 446 | 2 | 342 | 5.26e-42 | 152 |
| Msa1271270 | MtrunA17_Chr2g0297831 | 27.804 | 428 | 264 | 14 | 24 | 443 | 64 | 454 | 1.08e-41 | 155 |
| Msa1271270 | MtrunA17_Chr6g0452571 | 32.143 | 364 | 198 | 11 | 98 | 457 | 33 | 351 | 1.01e-40 | 149 |
| Msa1271270 | MtrunA17_Chr2g0300311 | 27.869 | 427 | 266 | 15 | 24 | 443 | 47 | 438 | 1.96e-39 | 148 |
| Msa1271270 | MtrunA17_Chr5g0439721 | 27.918 | 437 | 258 | 12 | 23 | 444 | 28 | 422 | 9.71e-38 | 143 |
| Msa1271270 | MtrunA17_Chr7g0218171 | 32.917 | 240 | 124 | 6 | 213 | 444 | 79 | 289 | 3.49e-30 | 119 |
| Msa1271270 | MtrunA17_Chr6g0452541 | 34.112 | 214 | 116 | 5 | 226 | 437 | 29 | 219 | 1.97e-28 | 112 |
| Msa1271270 | MtrunA17_Chr8g0334981 | 54.878 | 82 | 37 | 0 | 374 | 455 | 1 | 82 | 1.64e-25 | 99.8 |
| Msa1271270 | MtrunA17_Chr5g0440401 | 30.653 | 199 | 117 | 2 | 258 | 455 | 39 | 217 | 1.55e-21 | 92.8 |
| Msa1271270 | MtrunA17_Chr5g0439681 | 28.829 | 222 | 131 | 4 | 241 | 455 | 110 | 311 | 1.75e-20 | 92.0 |
| Msa1271270 | MtrunA17_Chr7g0238511 | 23.364 | 428 | 270 | 10 | 41 | 451 | 43 | 429 | 1.47e-19 | 90.9 |
| Msa1271270 | MtrunA17_Chr8g0354591 | 25.561 | 446 | 268 | 17 | 29 | 438 | 26 | 443 | 2.10e-19 | 90.5 |
| Msa1271270 | MtrunA17_Chr8g0354871 | 26.724 | 232 | 132 | 5 | 227 | 444 | 164 | 371 | 2.58e-19 | 89.7 |
| Msa1271270 | MtrunA17_Chr7g0238111 | 24.235 | 425 | 258 | 14 | 44 | 452 | 49 | 425 | 5.36e-19 | 89.0 |
| Msa1271270 | MtrunA17_Chr7g0238141 | 24.337 | 415 | 257 | 12 | 41 | 431 | 42 | 423 | 1.99e-17 | 84.3 |
| Msa1271270 | MtrunA17_Chr7g0238211 | 27.219 | 169 | 106 | 2 | 262 | 429 | 5 | 157 | 1.78e-16 | 77.4 |
| Msa1271270 | MtrunA17_Chr7g0238231 | 22.768 | 448 | 302 | 12 | 41 | 451 | 43 | 483 | 2.92e-15 | 77.8 |
| Msa1271270 | MtrunA17_Chr7g0238081 | 29.091 | 165 | 100 | 3 | 262 | 425 | 5 | 153 | 3.48e-15 | 73.6 |
| Msa1271270 | MtrunA17_Chr7g0238171 | 30.366 | 191 | 112 | 5 | 262 | 451 | 342 | 512 | 4.21e-15 | 77.4 |
| Msa1271270 | MtrunA17_Chr5g0439661 | 31.953 | 169 | 105 | 5 | 14 | 173 | 14 | 181 | 5.73e-15 | 73.6 |
| Msa1271270 | MtrunA17_Chr7g0238091 | 30.496 | 141 | 96 | 2 | 304 | 442 | 67 | 207 | 1.44e-14 | 72.8 |
| Msa1271270 | MtrunA17_Chr7g0238101 | 28.415 | 183 | 113 | 4 | 262 | 442 | 301 | 467 | 1.54e-14 | 75.5 |
| Msa1271270 | MtrunA17_Chr7g0232521 | 26.554 | 177 | 113 | 3 | 257 | 432 | 37 | 197 | 6.61e-14 | 70.9 |
| Msa1271270 | MtrunA17_Chr7g0238191 | 22.970 | 431 | 262 | 15 | 29 | 431 | 27 | 415 | 1.06e-13 | 72.8 |
| Msa1271270 | MtrunA17_Chr7g0238241 | 27.811 | 169 | 105 | 3 | 262 | 429 | 289 | 441 | 1.77e-13 | 72.4 |
| Msa1271270 | MtrunA17_Chr1g0170351 | 24.757 | 412 | 252 | 14 | 25 | 411 | 25 | 403 | 2.17e-13 | 72.0 |
| Msa1271270 | MtrunA17_Chr7g0238051 | 27.083 | 144 | 104 | 1 | 304 | 446 | 213 | 356 | 4.45e-13 | 70.5 |
| Msa1271270 | MtrunA17_Chr2g0297821 | 24.731 | 186 | 123 | 4 | 260 | 443 | 1 | 171 | 1.85e-12 | 65.9 |
| Msa1271270 | MtrunA17_Chr7g0238131 | 24.359 | 312 | 188 | 8 | 157 | 442 | 114 | 403 | 3.77e-12 | 67.8 |
| Msa1271270 | MtrunA17_Chr7g0220521 | 25.668 | 187 | 118 | 3 | 258 | 443 | 364 | 530 | 9.16e-12 | 67.0 |
| Msa1271270 | MtrunA17_Chr7g0238181 | 24.585 | 301 | 185 | 7 | 153 | 452 | 89 | 348 | 1.36e-11 | 65.9 |
| Msa1271270 | MtrunA17_Chr3g0107251 | 27.822 | 381 | 196 | 19 | 29 | 370 | 32 | 372 | 1.41e-11 | 66.2 |
| Msa1271270 | MtrunA17_Chr8g0335001 | 44.286 | 70 | 37 | 2 | 9 | 77 | 38 | 106 | 3.59e-11 | 60.1 |
| Msa1271270 | MtrunA17_Chr7g0218161 | 66.667 | 36 | 12 | 0 | 20 | 55 | 18 | 53 | 4.00e-11 | 58.5 |
| Msa1271270 | MtrunA17_Chr6g0452511 | 38.095 | 63 | 39 | 0 | 330 | 392 | 1 | 63 | 9.24e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1271270 | AT2G28580.6 | 30.455 | 440 | 251 | 11 | 25 | 446 | 39 | 441 | 2.35e-54 | 188 |
| Msa1271270 | AT2G28580.1 | 30.455 | 440 | 251 | 11 | 25 | 446 | 107 | 509 | 1.39e-53 | 188 |
| Msa1271270 | AT2G28580.2 | 30.455 | 440 | 251 | 11 | 25 | 446 | 121 | 523 | 1.86e-53 | 188 |
| Msa1271270 | AT4G31980.1 | 30.788 | 419 | 241 | 13 | 23 | 437 | 289 | 662 | 9.38e-52 | 186 |
| Msa1271270 | AT2G28580.5 | 29.698 | 431 | 249 | 10 | 25 | 446 | 107 | 492 | 1.11e-51 | 182 |
| Msa1271270 | AT2G28580.4 | 29.698 | 431 | 249 | 10 | 25 | 446 | 121 | 506 | 1.36e-51 | 182 |
| Msa1271270 | AT2G44930.1 | 29.047 | 451 | 250 | 13 | 25 | 447 | 82 | 490 | 3.14e-50 | 179 |
| Msa1271270 | AT2G36430.1 | 30.900 | 411 | 240 | 15 | 27 | 429 | 45 | 419 | 3.97e-50 | 177 |
| Msa1271270 | AT1G67150.4 | 28.146 | 437 | 257 | 13 | 22 | 444 | 1 | 394 | 1.22e-43 | 158 |
| Msa1271270 | AT1G67150.1 | 28.146 | 437 | 257 | 13 | 22 | 444 | 1 | 394 | 1.22e-43 | 158 |
| Msa1271270 | AT3G50120.1 | 27.212 | 452 | 270 | 11 | 20 | 444 | 96 | 515 | 1.37e-43 | 160 |
| Msa1271270 | AT3G50170.1 | 27.740 | 447 | 260 | 11 | 26 | 444 | 112 | 523 | 4.56e-43 | 159 |
| Msa1271270 | AT1G67150.2 | 27.891 | 441 | 257 | 13 | 22 | 444 | 1 | 398 | 5.10e-43 | 157 |
| Msa1271270 | AT5G11290.2 | 25.556 | 450 | 288 | 11 | 2 | 446 | 6 | 413 | 5.60e-43 | 157 |
| Msa1271270 | AT3G50150.1 | 25.847 | 472 | 290 | 12 | 12 | 456 | 68 | 506 | 1.27e-41 | 155 |
| Msa1271270 | AT3G50140.1 | 28.062 | 449 | 258 | 14 | 25 | 444 | 111 | 523 | 7.34e-41 | 153 |
| Msa1271270 | AT3G50160.1 | 26.517 | 445 | 266 | 12 | 25 | 456 | 102 | 498 | 6.86e-40 | 150 |
| Msa1271270 | AT3G50130.1 | 27.938 | 451 | 258 | 13 | 12 | 429 | 117 | 533 | 1.94e-38 | 147 |
| Msa1271270 | AT3G47200.1 | 28.090 | 445 | 265 | 13 | 18 | 442 | 37 | 446 | 2.69e-38 | 145 |
| Msa1271270 | AT3G47200.2 | 28.090 | 445 | 265 | 13 | 18 | 442 | 37 | 446 | 2.69e-38 | 145 |
| Msa1271270 | AT3G50180.1 | 28.539 | 438 | 252 | 15 | 26 | 444 | 177 | 572 | 3.79e-37 | 144 |
| Msa1271270 | AT1G65985.1 | 28.381 | 451 | 234 | 15 | 28 | 429 | 15 | 425 | 1.18e-36 | 140 |
| Msa1271270 | AT1G65985.2 | 28.381 | 451 | 234 | 15 | 28 | 429 | 15 | 425 | 1.18e-36 | 140 |
| Msa1271270 | AT3G47250.3 | 26.154 | 455 | 266 | 14 | 18 | 444 | 52 | 464 | 5.46e-36 | 139 |
| Msa1271270 | AT3G47250.2 | 26.154 | 455 | 266 | 14 | 18 | 444 | 52 | 464 | 5.46e-36 | 139 |
| Msa1271270 | AT3G47250.1 | 26.154 | 455 | 266 | 14 | 18 | 444 | 52 | 464 | 5.46e-36 | 139 |
| Msa1271270 | AT2G28580.3 | 30.769 | 364 | 197 | 11 | 25 | 370 | 121 | 447 | 7.54e-36 | 138 |
| Msa1271270 | AT3G47210.1 | 27.901 | 405 | 245 | 11 | 18 | 413 | 84 | 450 | 1.15e-33 | 132 |
| Msa1271270 | AT5G22550.2 | 25.536 | 466 | 283 | 13 | 27 | 450 | 44 | 487 | 8.63e-32 | 127 |
| Msa1271270 | AT5G22540.1 | 26.024 | 415 | 261 | 11 | 25 | 429 | 29 | 407 | 1.63e-30 | 123 |
| Msa1271270 | AT3G50190.1 | 27.315 | 432 | 254 | 14 | 25 | 444 | 94 | 477 | 2.56e-30 | 123 |
| Msa1271270 | AT5G11290.1 | 23.377 | 385 | 251 | 9 | 64 | 446 | 2 | 344 | 1.11e-27 | 113 |
| Msa1271270 | AT1G67150.3 | 24.541 | 436 | 231 | 16 | 22 | 444 | 1 | 351 | 4.07e-26 | 109 |
| Msa1271270 | AT5G22560.1 | 28.390 | 236 | 134 | 6 | 24 | 240 | 44 | 263 | 5.92e-25 | 107 |
| Msa1271270 | AT3G44710.1 | 31.466 | 232 | 135 | 9 | 15 | 238 | 34 | 249 | 2.88e-22 | 99.8 |
| Msa1271270 | AT3G50170.2 | 26.298 | 289 | 172 | 9 | 26 | 288 | 112 | 385 | 4.74e-20 | 92.4 |
| Msa1271270 | AT3G60470.1 | 31.053 | 190 | 110 | 3 | 264 | 452 | 365 | 534 | 7.34e-20 | 92.8 |
| Msa1271270 | AT3G60470.1 | 32.222 | 180 | 93 | 5 | 21 | 173 | 26 | 203 | 1.76e-16 | 82.4 |
| Msa1271270 | AT3G50140.2 | 28.179 | 291 | 166 | 11 | 25 | 288 | 111 | 385 | 3.03e-18 | 87.0 |
| Msa1271270 | AT3G50150.2 | 23.188 | 345 | 218 | 12 | 25 | 338 | 88 | 416 | 2.27e-17 | 84.7 |
| Msa1271270 | AT3G02645.1 | 27.374 | 179 | 111 | 2 | 254 | 431 | 338 | 498 | 1.79e-15 | 79.0 |
| Msa1271270 | AT3G50190.4 | 26.296 | 270 | 166 | 10 | 25 | 288 | 94 | 336 | 4.30e-13 | 70.9 |
| Msa1271270 | AT3G50190.3 | 26.296 | 270 | 166 | 10 | 25 | 288 | 94 | 336 | 4.30e-13 | 70.9 |
| Msa1271270 | AT3G50190.2 | 26.296 | 270 | 166 | 10 | 25 | 288 | 94 | 336 | 5.42e-13 | 70.5 |
Find 55 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCCTATGTTTATTT+TGG | 0.091254 | 8_3:+4734459 | Msa1271270:CDS |
| AAAGGTACTTTCATGCATTT+TGG | 0.130004 | 8_3:+4734173 | Msa1271270:CDS |
| AACATAGGCTCAATGATTTC+TGG | 0.230505 | 8_3:-4734016 | None:intergenic |
| TAACTGGTGGAAACATTATA+TGG | 0.253364 | 8_3:+4735200 | Msa1271270:CDS |
| AGTACATATTCTGGTCTAAA+AGG | 0.297271 | 8_3:-4734730 | None:intergenic |
| GCTGTTCTTAGTACATATTC+TGG | 0.309895 | 8_3:-4734739 | None:intergenic |
| CTGCATGACTTCCAAGTTCA+TGG | 0.314386 | 8_3:-4735083 | None:intergenic |
| TGTTTCTCTTGATTAAGTTC+TGG | 0.332904 | 8_3:-4734145 | None:intergenic |
| TCCAAGAGAAATTCAAGTTA+AGG | 0.333547 | 8_3:+4734681 | Msa1271270:CDS |
| ATCCTGGCAAAGTTCTTGTT+TGG | 0.335574 | 8_3:-4734284 | None:intergenic |
| GAATTGGCAACATTGGTAAA+TGG | 0.343095 | 8_3:+4735105 | Msa1271270:CDS |
| AAGCAACAGAATGTGTTCTT+AGG | 0.348136 | 8_3:+4734932 | Msa1271270:CDS |
| CCAAGAGAAATTCAAGTTAA+GGG | 0.361703 | 8_3:+4734682 | Msa1271270:CDS |
| ACACCAAAGTTTATCTCAAT+AGG | 0.368142 | 8_3:+4734103 | Msa1271270:CDS |
| TGAATGAACATTATAATAAC+TGG | 0.371937 | 8_3:+4735184 | Msa1271270:CDS |
| GACATTGTTCGAACGCGATT+AGG | 0.372840 | 8_3:-4734957 | None:intergenic |
| AAATAAACAAACTTTAGCTT+TGG | 0.384668 | 8_3:+4734207 | Msa1271270:CDS |
| CCCTTAACTTGAATTTCTCT+TGG | 0.389209 | 8_3:-4734682 | None:intergenic |
| TTGTTATGGAAAGATCATTA+AGG | 0.389525 | 8_3:+4735158 | Msa1271270:CDS |
| GAATGGTTGCAATAGCAATA+AGG | 0.400363 | 8_3:+4734516 | Msa1271270:CDS |
| ACTTGGAAGTCATGCAGAAT+TGG | 0.403752 | 8_3:+4735089 | Msa1271270:CDS |
| ATCTAATCAAATCAGTGAAA+TGG | 0.406351 | 8_3:-4734648 | None:intergenic |
| GGACCTATTGAGATAAACTT+TGG | 0.441928 | 8_3:-4734106 | None:intergenic |
| ACATGAAGATGTTGAGTTGT+TGG | 0.443426 | 8_3:+4735041 | Msa1271270:CDS |
| ATTTCATGTTTACAACATCA+TGG | 0.446527 | 8_3:+4734395 | Msa1271270:CDS |
| AGAGTTAGTTCAACTGTTGT+TGG | 0.459714 | 8_3:+4735258 | Msa1271270:CDS |
| TAAGAACACATTCTGTTGCT+TGG | 0.460229 | 8_3:-4734930 | None:intergenic |
| TTCCAAACAAGAACTTTGCC+AGG | 0.463658 | 8_3:+4734282 | Msa1271270:CDS |
| AACATTATATGGGAATGTTA+AGG | 0.469604 | 8_3:+4735211 | Msa1271270:CDS |
| ATTAGTTTCGAGAAAGTTCA+AGG | 0.472626 | 8_3:+4734784 | Msa1271270:CDS |
| GTGGTGACATCAAATTGTTA+TGG | 0.484272 | 8_3:+4735144 | Msa1271270:CDS |
| GAAATCATTAGCCATGAACT+TGG | 0.500879 | 8_3:+4735072 | Msa1271270:CDS |
| GCTACAAAGTTGAGTGAAGC+AGG | 0.504844 | 8_3:+4734760 | Msa1271270:CDS |
| CATAGTTGCATATGAAAGGT+TGG | 0.506971 | 8_3:-4734990 | None:intergenic |
| TCTGGATTCTGACTATGAAA+AGG | 0.511649 | 8_3:-4734127 | None:intergenic |
| AACTGGTGGAAACATTATAT+GGG | 0.515685 | 8_3:+4735201 | Msa1271270:CDS |
| CTTGGTCTACATTCAAATGA+GGG | 0.527598 | 8_3:-4734912 | None:intergenic |
| CTTCATTCAACTTCAAGAGA+TGG | 0.534037 | 8_3:-4734072 | None:intergenic |
| GCTTGGTCTACATTCAAATG+AGG | 0.535531 | 8_3:-4734913 | None:intergenic |
| GTGTTATTAGCTGAAAAGAA+TGG | 0.538677 | 8_3:+4734499 | Msa1271270:CDS |
| GAAACATAGTTGCATATGAA+AGG | 0.547120 | 8_3:-4734994 | None:intergenic |
| AATTCCTCCAAAATAAACAT+AGG | 0.557088 | 8_3:-4734466 | None:intergenic |
| TCATGCAGAATTGGCAACAT+TGG | 0.557270 | 8_3:+4735098 | Msa1271270:CDS |
| GATTCGACAAATTTAAAACA+TGG | 0.566903 | 8_3:-4734877 | None:intergenic |
| TTCAACTTCAAGAGATGGTG+AGG | 0.578382 | 8_3:-4734067 | None:intergenic |
| AAATCAGTGAAATGGTTGCA+AGG | 0.586489 | 8_3:-4734640 | None:intergenic |
| ACAGTTGAACTAACTCTCCA+AGG | 0.590172 | 8_3:-4735252 | None:intergenic |
| ATCAAGAGAAACAGAAACAA+AGG | 0.600906 | 8_3:+4734155 | Msa1271270:CDS |
| ATGAACATTATAATAACTGG+TGG | 0.615438 | 8_3:+4735187 | Msa1271270:CDS |
| GATTTACAAAATGACACAGA+GGG | 0.630083 | 8_3:+4734417 | Msa1271270:CDS |
| TTGATTATGTGCTGAATCTG+TGG | 0.644996 | 8_3:-4733989 | None:intergenic |
| TGGTCTTTGCAAATATGTTG+TGG | 0.649266 | 8_3:+4735125 | Msa1271270:CDS |
| TTATATGGGAATGTTAAGGT+CGG | 0.661560 | 8_3:+4735215 | Msa1271270:CDS |
| TTTGGAGGAATTACACAGAG+GGG | 0.695602 | 8_3:+4734477 | Msa1271270:CDS |
| GGATTTACAAAATGACACAG+AGG | 0.748966 | 8_3:+4734416 | Msa1271270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAACAAACTTTAGCTT+TGG | + | chr8_3:4734207-4734226 | Msa1271270:CDS | 20.0% |
| !!! | TCAAATTCCTATGTTTATTT+TGG | + | chr8_3:4734459-4734478 | Msa1271270:CDS | 20.0% |
| !! | AAAGTTAACAAGTCAAAAAT+TGG | + | chr8_3:4734597-4734616 | Msa1271270:CDS | 20.0% |
| !! | TGAATGAACATTATAATAAC+TGG | + | chr8_3:4735184-4735203 | Msa1271270:CDS | 20.0% |
| !!! | AAATAAACAAACTTTAGCTT+TGG | + | chr8_3:4734207-4734226 | Msa1271270:CDS | 20.0% |
| !!! | TCAAATTCCTATGTTTATTT+TGG | + | chr8_3:4734459-4734478 | Msa1271270:CDS | 20.0% |
| !! | AAAGTTAACAAGTCAAAAAT+TGG | + | chr8_3:4734597-4734616 | Msa1271270:CDS | 20.0% |
| !! | TGAATGAACATTATAATAAC+TGG | + | chr8_3:4735184-4735203 | Msa1271270:CDS | 20.0% |
| !! | CAACATTTTTCATGTAACAT+AGG | - | chr8_3:4734034-4734053 | None:intergenic | 25.0% |
| ! | TGAAAAATGTTGCATTTACA+AGG | + | chr8_3:4734042-4734061 | Msa1271270:CDS | 25.0% |
| ! | ATTTCATGTTTACAACATCA+TGG | + | chr8_3:4734395-4734414 | Msa1271270:CDS | 25.0% |
| !!! | AATTCCTATGTTTATTTTGG+AGG | + | chr8_3:4734462-4734481 | Msa1271270:CDS | 25.0% |
| ! | AATTCCTCCAAAATAAACAT+AGG | - | chr8_3:4734469-4734488 | None:intergenic | 25.0% |
| !!! | TTTTGACTTGTTAACTTTTG+AGG | - | chr8_3:4734595-4734614 | None:intergenic | 25.0% |
| ! | ATCTAATCAAATCAGTGAAA+TGG | - | chr8_3:4734651-4734670 | None:intergenic | 25.0% |
| !! | GATTCGACAAATTTAAAACA+TGG | - | chr8_3:4734880-4734899 | None:intergenic | 25.0% |
| ! | TTGTTATGGAAAGATCATTA+AGG | + | chr8_3:4735158-4735177 | Msa1271270:CDS | 25.0% |
| ! | ATGAACATTATAATAACTGG+TGG | + | chr8_3:4735187-4735206 | Msa1271270:CDS | 25.0% |
| ! | AACATTATATGGGAATGTTA+AGG | + | chr8_3:4735211-4735230 | Msa1271270:CDS | 25.0% |
| !! | GTCAATTTTCTTAGAGTTAT+TGG | + | chr8_3:4735306-4735325 | Msa1271270:CDS | 25.0% |
| !! | CAACATTTTTCATGTAACAT+AGG | - | chr8_3:4734034-4734053 | None:intergenic | 25.0% |
| ! | TGAAAAATGTTGCATTTACA+AGG | + | chr8_3:4734042-4734061 | Msa1271270:CDS | 25.0% |
| ! | ATTTCATGTTTACAACATCA+TGG | + | chr8_3:4734395-4734414 | Msa1271270:CDS | 25.0% |
| !!! | AATTCCTATGTTTATTTTGG+AGG | + | chr8_3:4734462-4734481 | Msa1271270:CDS | 25.0% |
| ! | AATTCCTCCAAAATAAACAT+AGG | - | chr8_3:4734469-4734488 | None:intergenic | 25.0% |
| !!! | TTTTGACTTGTTAACTTTTG+AGG | - | chr8_3:4734595-4734614 | None:intergenic | 25.0% |
| ! | ATCTAATCAAATCAGTGAAA+TGG | - | chr8_3:4734651-4734670 | None:intergenic | 25.0% |
| !! | GATTCGACAAATTTAAAACA+TGG | - | chr8_3:4734880-4734899 | None:intergenic | 25.0% |
| ! | TTGTTATGGAAAGATCATTA+AGG | + | chr8_3:4735158-4735177 | Msa1271270:CDS | 25.0% |
| ! | ATGAACATTATAATAACTGG+TGG | + | chr8_3:4735187-4735206 | Msa1271270:CDS | 25.0% |
| ! | AACATTATATGGGAATGTTA+AGG | + | chr8_3:4735211-4735230 | Msa1271270:CDS | 25.0% |
| !! | GTCAATTTTCTTAGAGTTAT+TGG | + | chr8_3:4735306-4735325 | Msa1271270:CDS | 25.0% |
| ACACCAAAGTTTATCTCAAT+AGG | + | chr8_3:4734103-4734122 | Msa1271270:CDS | 30.0% | |
| TGTTTCTCTTGATTAAGTTC+TGG | - | chr8_3:4734148-4734167 | None:intergenic | 30.0% | |
| ATCAAGAGAAACAGAAACAA+AGG | + | chr8_3:4734155-4734174 | Msa1271270:CDS | 30.0% | |
| !!! | AAAGGTACTTTCATGCATTT+TGG | + | chr8_3:4734173-4734192 | Msa1271270:CDS | 30.0% |
| ! | GTTAGACTCAGTTTTCATAA+TGG | + | chr8_3:4734330-4734349 | Msa1271270:CDS | 30.0% |
| GATTTACAAAATGACACAGA+GGG | + | chr8_3:4734417-4734436 | Msa1271270:CDS | 30.0% | |
| ! | GTGTTATTAGCTGAAAAGAA+TGG | + | chr8_3:4734499-4734518 | Msa1271270:CDS | 30.0% |
| ! | TCCAAGAGAAATTCAAGTTA+AGG | + | chr8_3:4734681-4734700 | Msa1271270:CDS | 30.0% |
| ! | CCAAGAGAAATTCAAGTTAA+GGG | + | chr8_3:4734682-4734701 | Msa1271270:CDS | 30.0% |
| !! | AAAGGTGTGAAACTTTTTGA+TGG | - | chr8_3:4734715-4734734 | None:intergenic | 30.0% |
| AGTACATATTCTGGTCTAAA+AGG | - | chr8_3:4734733-4734752 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCGAGAAAGTTCA+AGG | + | chr8_3:4734784-4734803 | Msa1271270:CDS | 30.0% |
| GAAACATAGTTGCATATGAA+AGG | - | chr8_3:4734997-4735016 | None:intergenic | 30.0% | |
| TAACTGGTGGAAACATTATA+TGG | + | chr8_3:4735200-4735219 | Msa1271270:CDS | 30.0% | |
| AACTGGTGGAAACATTATAT+GGG | + | chr8_3:4735201-4735220 | Msa1271270:CDS | 30.0% | |
| TTATATGGGAATGTTAAGGT+CGG | + | chr8_3:4735215-4735234 | Msa1271270:CDS | 30.0% | |
| ACACCAAAGTTTATCTCAAT+AGG | + | chr8_3:4734103-4734122 | Msa1271270:CDS | 30.0% | |
| TGTTTCTCTTGATTAAGTTC+TGG | - | chr8_3:4734148-4734167 | None:intergenic | 30.0% | |
| ATCAAGAGAAACAGAAACAA+AGG | + | chr8_3:4734155-4734174 | Msa1271270:CDS | 30.0% | |
| !!! | AAAGGTACTTTCATGCATTT+TGG | + | chr8_3:4734173-4734192 | Msa1271270:CDS | 30.0% |
| ! | GTTAGACTCAGTTTTCATAA+TGG | + | chr8_3:4734330-4734349 | Msa1271270:CDS | 30.0% |
| GATTTACAAAATGACACAGA+GGG | + | chr8_3:4734417-4734436 | Msa1271270:CDS | 30.0% | |
| ! | GTGTTATTAGCTGAAAAGAA+TGG | + | chr8_3:4734499-4734518 | Msa1271270:CDS | 30.0% |
| ! | TCCAAGAGAAATTCAAGTTA+AGG | + | chr8_3:4734681-4734700 | Msa1271270:CDS | 30.0% |
| ! | CCAAGAGAAATTCAAGTTAA+GGG | + | chr8_3:4734682-4734701 | Msa1271270:CDS | 30.0% |
| !! | AAAGGTGTGAAACTTTTTGA+TGG | - | chr8_3:4734715-4734734 | None:intergenic | 30.0% |
| AGTACATATTCTGGTCTAAA+AGG | - | chr8_3:4734733-4734752 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCGAGAAAGTTCA+AGG | + | chr8_3:4734784-4734803 | Msa1271270:CDS | 30.0% |
| GAAACATAGTTGCATATGAA+AGG | - | chr8_3:4734997-4735016 | None:intergenic | 30.0% | |
| TAACTGGTGGAAACATTATA+TGG | + | chr8_3:4735200-4735219 | Msa1271270:CDS | 30.0% | |
| AACTGGTGGAAACATTATAT+GGG | + | chr8_3:4735201-4735220 | Msa1271270:CDS | 30.0% | |
| TTATATGGGAATGTTAAGGT+CGG | + | chr8_3:4735215-4735234 | Msa1271270:CDS | 30.0% | |
| TTGATTATGTGCTGAATCTG+TGG | - | chr8_3:4733992-4734011 | None:intergenic | 35.0% | |
| AACATAGGCTCAATGATTTC+TGG | - | chr8_3:4734019-4734038 | None:intergenic | 35.0% | |
| CTTCATTCAACTTCAAGAGA+TGG | - | chr8_3:4734075-4734094 | None:intergenic | 35.0% | |
| GGACCTATTGAGATAAACTT+TGG | - | chr8_3:4734109-4734128 | None:intergenic | 35.0% | |
| TCTGGATTCTGACTATGAAA+AGG | - | chr8_3:4734130-4734149 | None:intergenic | 35.0% | |
| TTTCCAAAAACTTCTCATCC+TGG | - | chr8_3:4734303-4734322 | None:intergenic | 35.0% | |
| GGATTTACAAAATGACACAG+AGG | + | chr8_3:4734416-4734435 | Msa1271270:CDS | 35.0% | |
| !! | ATTTTGGAGGAATTACACAG+AGG | + | chr8_3:4734475-4734494 | Msa1271270:CDS | 35.0% |
| !! | TTTTGGAGGAATTACACAGA+GGG | + | chr8_3:4734476-4734495 | Msa1271270:CDS | 35.0% |
| GAATGGTTGCAATAGCAATA+AGG | + | chr8_3:4734516-4734535 | Msa1271270:CDS | 35.0% | |
| AAATCAGTGAAATGGTTGCA+AGG | - | chr8_3:4734643-4734662 | None:intergenic | 35.0% | |
| ! | CCCTTAACTTGAATTTCTCT+TGG | - | chr8_3:4734685-4734704 | None:intergenic | 35.0% |
| GCTGTTCTTAGTACATATTC+TGG | - | chr8_3:4734742-4734761 | None:intergenic | 35.0% | |
| CACAAAAACCAGCTCAAAAT+CGG | - | chr8_3:4734844-4734863 | None:intergenic | 35.0% | |
| CTTGGTCTACATTCAAATGA+GGG | - | chr8_3:4734915-4734934 | None:intergenic | 35.0% | |
| TAAGAACACATTCTGTTGCT+TGG | - | chr8_3:4734933-4734952 | None:intergenic | 35.0% | |
| AAGCAACAGAATGTGTTCTT+AGG | + | chr8_3:4734932-4734951 | Msa1271270:CDS | 35.0% | |
| CATAGTTGCATATGAAAGGT+TGG | - | chr8_3:4734993-4735012 | None:intergenic | 35.0% | |
| ! | ACATGAAGATGTTGAGTTGT+TGG | + | chr8_3:4735041-4735060 | Msa1271270:CDS | 35.0% |
| GAAATCATTAGCCATGAACT+TGG | + | chr8_3:4735072-4735091 | Msa1271270:CDS | 35.0% | |
| GAATTGGCAACATTGGTAAA+TGG | + | chr8_3:4735105-4735124 | Msa1271270:CDS | 35.0% | |
| TGGTCTTTGCAAATATGTTG+TGG | + | chr8_3:4735125-4735144 | Msa1271270:CDS | 35.0% | |
| GTGGTGACATCAAATTGTTA+TGG | + | chr8_3:4735144-4735163 | Msa1271270:CDS | 35.0% | |
| AGAGTTAGTTCAACTGTTGT+TGG | + | chr8_3:4735258-4735277 | Msa1271270:CDS | 35.0% | |
| TTGATTATGTGCTGAATCTG+TGG | - | chr8_3:4733992-4734011 | None:intergenic | 35.0% | |
| AACATAGGCTCAATGATTTC+TGG | - | chr8_3:4734019-4734038 | None:intergenic | 35.0% | |
| CTTCATTCAACTTCAAGAGA+TGG | - | chr8_3:4734075-4734094 | None:intergenic | 35.0% | |
| GGACCTATTGAGATAAACTT+TGG | - | chr8_3:4734109-4734128 | None:intergenic | 35.0% | |
| TCTGGATTCTGACTATGAAA+AGG | - | chr8_3:4734130-4734149 | None:intergenic | 35.0% | |
| TTTCCAAAAACTTCTCATCC+TGG | - | chr8_3:4734303-4734322 | None:intergenic | 35.0% | |
| GGATTTACAAAATGACACAG+AGG | + | chr8_3:4734416-4734435 | Msa1271270:CDS | 35.0% | |
| !! | ATTTTGGAGGAATTACACAG+AGG | + | chr8_3:4734475-4734494 | Msa1271270:CDS | 35.0% |
| !! | TTTTGGAGGAATTACACAGA+GGG | + | chr8_3:4734476-4734495 | Msa1271270:CDS | 35.0% |
| GAATGGTTGCAATAGCAATA+AGG | + | chr8_3:4734516-4734535 | Msa1271270:CDS | 35.0% | |
| AAATCAGTGAAATGGTTGCA+AGG | - | chr8_3:4734643-4734662 | None:intergenic | 35.0% | |
| ! | CCCTTAACTTGAATTTCTCT+TGG | - | chr8_3:4734685-4734704 | None:intergenic | 35.0% |
| GCTGTTCTTAGTACATATTC+TGG | - | chr8_3:4734742-4734761 | None:intergenic | 35.0% | |
| CACAAAAACCAGCTCAAAAT+CGG | - | chr8_3:4734844-4734863 | None:intergenic | 35.0% | |
| CTTGGTCTACATTCAAATGA+GGG | - | chr8_3:4734915-4734934 | None:intergenic | 35.0% | |
| TAAGAACACATTCTGTTGCT+TGG | - | chr8_3:4734933-4734952 | None:intergenic | 35.0% | |
| AAGCAACAGAATGTGTTCTT+AGG | + | chr8_3:4734932-4734951 | Msa1271270:CDS | 35.0% | |
| CATAGTTGCATATGAAAGGT+TGG | - | chr8_3:4734993-4735012 | None:intergenic | 35.0% | |
| ! | ACATGAAGATGTTGAGTTGT+TGG | + | chr8_3:4735041-4735060 | Msa1271270:CDS | 35.0% |
| GAAATCATTAGCCATGAACT+TGG | + | chr8_3:4735072-4735091 | Msa1271270:CDS | 35.0% | |
| GAATTGGCAACATTGGTAAA+TGG | + | chr8_3:4735105-4735124 | Msa1271270:CDS | 35.0% | |
| TGGTCTTTGCAAATATGTTG+TGG | + | chr8_3:4735125-4735144 | Msa1271270:CDS | 35.0% | |
| GTGGTGACATCAAATTGTTA+TGG | + | chr8_3:4735144-4735163 | Msa1271270:CDS | 35.0% | |
| AGAGTTAGTTCAACTGTTGT+TGG | + | chr8_3:4735258-4735277 | Msa1271270:CDS | 35.0% | |
| TTCAACTTCAAGAGATGGTG+AGG | - | chr8_3:4734070-4734089 | None:intergenic | 40.0% | |
| TTCCAAACAAGAACTTTGCC+AGG | + | chr8_3:4734282-4734301 | Msa1271270:CDS | 40.0% | |
| ATCCTGGCAAAGTTCTTGTT+TGG | - | chr8_3:4734287-4734306 | None:intergenic | 40.0% | |
| ! | TTGCCAGGATGAGAAGTTTT+TGG | + | chr8_3:4734297-4734316 | Msa1271270:CDS | 40.0% |
| TTTGGAGGAATTACACAGAG+GGG | + | chr8_3:4734477-4734496 | Msa1271270:CDS | 40.0% | |
| !!! | TTGAGCTGGTTTTTGTGCTT+AGG | + | chr8_3:4734847-4734866 | Msa1271270:CDS | 40.0% |
| GCTTGGTCTACATTCAAATG+AGG | - | chr8_3:4734916-4734935 | None:intergenic | 40.0% | |
| ACTTGGAAGTCATGCAGAAT+TGG | + | chr8_3:4735089-4735108 | Msa1271270:CDS | 40.0% | |
| TCATGCAGAATTGGCAACAT+TGG | + | chr8_3:4735098-4735117 | Msa1271270:CDS | 40.0% | |
| ACAGTTGAACTAACTCTCCA+AGG | - | chr8_3:4735255-4735274 | None:intergenic | 40.0% | |
| TTCAACTTCAAGAGATGGTG+AGG | - | chr8_3:4734070-4734089 | None:intergenic | 40.0% | |
| TTCCAAACAAGAACTTTGCC+AGG | + | chr8_3:4734282-4734301 | Msa1271270:CDS | 40.0% | |
| ATCCTGGCAAAGTTCTTGTT+TGG | - | chr8_3:4734287-4734306 | None:intergenic | 40.0% | |
| ! | TTGCCAGGATGAGAAGTTTT+TGG | + | chr8_3:4734297-4734316 | Msa1271270:CDS | 40.0% |
| TTTGGAGGAATTACACAGAG+GGG | + | chr8_3:4734477-4734496 | Msa1271270:CDS | 40.0% | |
| !!! | TTGAGCTGGTTTTTGTGCTT+AGG | + | chr8_3:4734847-4734866 | Msa1271270:CDS | 40.0% |
| GCTTGGTCTACATTCAAATG+AGG | - | chr8_3:4734916-4734935 | None:intergenic | 40.0% | |
| ACTTGGAAGTCATGCAGAAT+TGG | + | chr8_3:4735089-4735108 | Msa1271270:CDS | 40.0% | |
| TCATGCAGAATTGGCAACAT+TGG | + | chr8_3:4735098-4735117 | Msa1271270:CDS | 40.0% | |
| ACAGTTGAACTAACTCTCCA+AGG | - | chr8_3:4735255-4735274 | None:intergenic | 40.0% | |
| GCTACAAAGTTGAGTGAAGC+AGG | + | chr8_3:4734760-4734779 | Msa1271270:CDS | 45.0% | |
| GACATTGTTCGAACGCGATT+AGG | - | chr8_3:4734960-4734979 | None:intergenic | 45.0% | |
| CTGCATGACTTCCAAGTTCA+TGG | - | chr8_3:4735086-4735105 | None:intergenic | 45.0% | |
| ! | CGGTGTATTTTCGTGATCCT+TGG | + | chr8_3:4735235-4735254 | Msa1271270:CDS | 45.0% |
| GCTACAAAGTTGAGTGAAGC+AGG | + | chr8_3:4734760-4734779 | Msa1271270:CDS | 45.0% | |
| GACATTGTTCGAACGCGATT+AGG | - | chr8_3:4734960-4734979 | None:intergenic | 45.0% | |
| CTGCATGACTTCCAAGTTCA+TGG | - | chr8_3:4735086-4735105 | None:intergenic | 45.0% | |
| ! | CGGTGTATTTTCGTGATCCT+TGG | + | chr8_3:4735235-4735254 | Msa1271270:CDS | 45.0% |
| !!! | AGAAGACGCCGATTTTGAGC+TGG | + | chr8_3:4734833-4734852 | Msa1271270:CDS | 50.0% |
| !!! | AGAAGACGCCGATTTTGAGC+TGG | + | chr8_3:4734833-4734852 | Msa1271270:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 4733971 | 4735347 | 4733971 | ID=Msa1271270;Name=Msa1271270 |
| chr8_3 | mRNA | 4733971 | 4735347 | 4733971 | ID=Msa1271270-mRNA-1;Parent=Msa1271270;Name=Msa1271270-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|458 |
| chr8_3 | exon | 4733971 | 4735347 | 4733971 | ID=Msa1271270-mRNA-1:exon:1625;Parent=Msa1271270-mRNA-1 |
| chr8_3 | CDS | 4733971 | 4735347 | 4733971 | ID=Msa1271270-mRNA-1:cds;Parent=Msa1271270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
