Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039020 | XP_003626318.2 | 86.850 | 327 | 12 | 5 | 1 | 320 | 14 | 316 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039020 | sp|Q9C7T4|BH096_ARATH | 45.714 | 350 | 127 | 9 | 1 | 317 | 1 | 320 | 2.38e-82 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039020 | G7KZP3 | 86.850 | 327 | 12 | 5 | 1 | 320 | 14 | 316 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1039020 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1039020 | 0.837862 | 4.045784e-57 | -8.615850e-47 |
| Msa0001940 | Msa1039020 | 0.808840 | 2.540877e-50 | -8.615850e-47 |
| Msa0003890 | Msa1039020 | 0.821737 | 3.443987e-53 | -8.615850e-47 |
| Msa0017950 | Msa1039020 | 0.807733 | 4.375445e-50 | -8.615850e-47 |
| Msa0024550 | Msa1039020 | 0.832163 | 1.105588e-55 | -8.615850e-47 |
| Msa0044090 | Msa1039020 | 0.823697 | 1.204766e-53 | -8.615850e-47 |
| Msa0052800 | Msa1039020 | 0.808467 | 3.052814e-50 | -8.615850e-47 |
| Msa0054480 | Msa1039020 | 0.807897 | 4.037368e-50 | -8.615850e-47 |
| Msa0080090 | Msa1039020 | 0.814550 | 1.454954e-51 | -8.615850e-47 |
| Msa0089630 | Msa1039020 | 0.800097 | 1.690717e-48 | -8.615850e-47 |
| Msa0089750 | Msa1039020 | 0.805168 | 1.520624e-49 | -8.615850e-47 |
| Msa0097770 | Msa1039020 | 0.803033 | 4.227392e-49 | -8.615850e-47 |
| Msa0108410 | Msa1039020 | 0.812141 | 4.922709e-51 | -8.615850e-47 |
| Msa0120400 | Msa1039020 | 0.838519 | 2.740914e-57 | -8.615850e-47 |
| Msa0624420 | Msa1039020 | 0.805456 | 1.323291e-49 | -8.615850e-47 |
| Msa0625720 | Msa1039020 | 0.828378 | 9.292662e-55 | -8.615850e-47 |
| Msa0626510 | Msa1039020 | 0.815846 | 7.499118e-52 | -8.615850e-47 |
| Msa0661650 | Msa1039020 | 0.801596 | 8.356576e-49 | -8.615850e-47 |
| Msa0662240 | Msa1039020 | 0.823316 | 1.478974e-53 | -8.615850e-47 |
| Msa0663390 | Msa1039020 | 0.826969 | 2.026251e-54 | -8.615850e-47 |
| Msa0680660 | Msa1039020 | 0.812188 | 4.806443e-51 | -8.615850e-47 |
| Msa0707250 | Msa1039020 | 0.837550 | 4.864444e-57 | -8.615850e-47 |
| Msa0731940 | Msa1039020 | 0.810011 | 1.425088e-50 | -8.615850e-47 |
| Msa0733390 | Msa1039020 | 0.824305 | 8.674659e-54 | -8.615850e-47 |
| Msa0736600 | Msa1039020 | 0.800855 | 1.185162e-48 | -8.615850e-47 |
| Msa0760180 | Msa1039020 | 0.802780 | 4.769327e-49 | -8.615850e-47 |
| Msa0760250 | Msa1039020 | 0.811232 | 7.761296e-51 | -8.615850e-47 |
| Msa0762970 | Msa1039020 | 0.825726 | 4.006473e-54 | -8.615850e-47 |
| Msa0795870 | Msa1039020 | 0.809899 | 1.506252e-50 | -8.615850e-47 |
| Msa0817460 | Msa1039020 | 0.829695 | 4.457746e-55 | -8.615850e-47 |
| Msa0831110 | Msa1039020 | 0.807674 | 4.504675e-50 | -8.615850e-47 |
| Msa0833530 | Msa1039020 | 0.809200 | 2.128044e-50 | -8.615850e-47 |
| Msa0833650 | Msa1039020 | 0.800394 | 1.471426e-48 | -8.615850e-47 |
| Msa0835230 | Msa1039020 | 0.802814 | 4.691537e-49 | -8.615850e-47 |
| Msa0150860 | Msa1039020 | 0.812844 | 3.455684e-51 | -8.615850e-47 |
| Msa0164330 | Msa1039020 | 0.810427 | 1.158866e-50 | -8.615850e-47 |
| Msa0183760 | Msa1039020 | 0.809785 | 1.593998e-50 | -8.615850e-47 |
| Msa0211150 | Msa1039020 | 0.824323 | 8.591604e-54 | -8.615850e-47 |
| Msa0212990 | Msa1039020 | 0.814677 | 1.364267e-51 | -8.615850e-47 |
| Msa0221470 | Msa1039020 | 0.815083 | 1.108392e-51 | -8.615850e-47 |
| Msa0224780 | Msa1039020 | 0.801068 | 1.071809e-48 | -8.615850e-47 |
| Msa0225100 | Msa1039020 | 0.834878 | 2.322717e-56 | -8.615850e-47 |
| Msa0225110 | Msa1039020 | 0.806492 | 8.013163e-50 | -8.615850e-47 |
| Msa0225220 | Msa1039020 | 0.805704 | 1.174090e-49 | -8.615850e-47 |
| Msa0225860 | Msa1039020 | 0.806153 | 9.444910e-50 | -8.615850e-47 |
| Msa0367870 | Msa1039020 | 0.839502 | 1.524834e-57 | -8.615850e-47 |
| Msa0378720 | Msa1039020 | 0.819438 | 1.161513e-52 | -8.615850e-47 |
| Msa0388340 | Msa1039020 | 0.800369 | 1.488262e-48 | -8.615850e-47 |
| Msa0403640 | Msa1039020 | 0.825558 | 4.389845e-54 | -8.615850e-47 |
| Msa0403970 | Msa1039020 | 0.800974 | 1.120608e-48 | -8.615850e-47 |
| Msa0406770 | Msa1039020 | 0.820958 | 5.209122e-53 | -8.615850e-47 |
| Msa0425170 | Msa1039020 | 0.805963 | 1.035553e-49 | -8.615850e-47 |
| Msa0427100 | Msa1039020 | 0.804515 | 2.081581e-49 | -8.615850e-47 |
| Msa0427120 | Msa1039020 | 0.814482 | 1.506365e-51 | -8.615850e-47 |
| Msa0428080 | Msa1039020 | 0.800286 | 1.547673e-48 | -8.615850e-47 |
| Msa0428920 | Msa1039020 | 0.811230 | 7.769556e-51 | -8.615850e-47 |
| Msa0460590 | Msa1039020 | 0.810746 | 9.887256e-51 | -8.615850e-47 |
| Msa0474730 | Msa1039020 | 0.803677 | 3.110613e-49 | -8.615850e-47 |
| Msa0479170 | Msa1039020 | 0.802422 | 5.653740e-49 | -8.615850e-47 |
| Msa0481530 | Msa1039020 | 0.819467 | 1.143860e-52 | -8.615850e-47 |
| Msa0980200 | Msa1039020 | 0.819016 | 1.449105e-52 | -8.615850e-47 |
| Msa1019430 | Msa1039020 | 0.806226 | 9.115379e-50 | -8.615850e-47 |
| Msa1019470 | Msa1039020 | 0.827852 | 1.244501e-54 | -8.615850e-47 |
| Msa1023500 | Msa1039020 | 0.800361 | 1.494316e-48 | -8.615850e-47 |
| Msa1031930 | Msa1039020 | 0.801411 | 9.120514e-49 | -8.615850e-47 |
| Msa1034500 | Msa1039020 | 0.813884 | 2.042128e-51 | -8.615850e-47 |
| Msa1039020 | Msa1043370 | 0.810078 | 1.378180e-50 | -8.615850e-47 |
| Msa1039020 | Msa1075540 | 0.817920 | 2.567126e-52 | -8.615850e-47 |
| Msa1039020 | Msa1089450 | 0.814981 | 1.168221e-51 | -8.615850e-47 |
| Msa1039020 | Msa1121490 | 0.805548 | 1.265556e-49 | -8.615850e-47 |
| Msa1039020 | Msa1123380 | 0.816966 | 4.209884e-52 | -8.615850e-47 |
| Msa1039020 | Msa1132840 | 0.804127 | 2.507950e-49 | -8.615850e-47 |
| Msa1039020 | Msa1137570 | 0.815205 | 1.041640e-51 | -8.615850e-47 |
| Msa1039020 | Msa1145810 | 0.807155 | 5.802359e-50 | -8.615850e-47 |
| Msa1039020 | Msa1155170 | -0.833640 | 4.749060e-56 | -8.615850e-47 |
| Msa1039020 | Msa1162780 | 0.831628 | 1.498998e-55 | -8.615850e-47 |
| Msa1039020 | Msa1164960 | 0.875001 | 4.344355e-68 | -8.615850e-47 |
| Msa1039020 | Msa1173170 | 0.811471 | 6.886309e-51 | -8.615850e-47 |
| Msa1039020 | Msa1186020 | 0.803766 | 2.980378e-49 | -8.615850e-47 |
| Msa1039020 | Msa1186640 | 0.800314 | 1.527777e-48 | -8.615850e-47 |
| Msa1039020 | Msa1193170 | 0.814537 | 1.464818e-51 | -8.615850e-47 |
| Msa1039020 | Msa1193290 | 0.803324 | 3.680265e-49 | -8.615850e-47 |
| Msa1039020 | Msa1205280 | 0.807715 | 4.415363e-50 | -8.615850e-47 |
| Msa1039020 | Msa1208160 | 0.800040 | 1.736521e-48 | -8.615850e-47 |
| Msa1039020 | Msa1225860 | -0.837629 | 4.642996e-57 | -8.615850e-47 |
| Msa1039020 | Msa1228200 | 0.840532 | 8.217989e-58 | -8.615850e-47 |
| Msa1039020 | Msa1236410 | 0.801044 | 1.084006e-48 | -8.615850e-47 |
| Msa1039020 | Msa1238820 | 0.803724 | 3.041233e-49 | -8.615850e-47 |
| Msa1039020 | Msa1267770 | 0.806485 | 8.039205e-50 | -8.615850e-47 |
| Msa1039020 | Msa1271270 | 0.802203 | 6.272341e-49 | -8.615850e-47 |
| Msa1039020 | Msa1277220 | 0.815002 | 1.155273e-51 | -8.615850e-47 |
| Msa1039020 | Msa1286610 | 0.807161 | 5.786541e-50 | -8.615850e-47 |
| Msa1039020 | Msa1287440 | 0.806243 | 9.043297e-50 | -8.615850e-47 |
| Msa1039020 | Msa1291730 | 0.827384 | 1.611915e-54 | -8.615850e-47 |
| Msa1039020 | Msa1297230 | 0.849321 | 3.485565e-60 | -8.615850e-47 |
| Msa1039020 | Msa1298370 | 0.807358 | 5.254737e-50 | -8.615850e-47 |
| Msa1039020 | Msa1308870 | 0.818696 | 1.713005e-52 | -8.615850e-47 |
| Msa1039020 | Msa1314650 | 0.812900 | 3.358967e-51 | -8.615850e-47 |
| Msa1039020 | Msa1330420 | 0.813803 | 2.127321e-51 | -8.615850e-47 |
| Msa1039020 | Msa1331000 | 0.807318 | 5.360595e-50 | -8.615850e-47 |
| Msa1039020 | Msa1333480 | 0.804452 | 2.145182e-49 | -8.615850e-47 |
| Msa1039020 | Msa1343430 | 0.842296 | 2.819677e-58 | -8.615850e-47 |
| Msa1039020 | Msa1353980 | 0.804167 | 2.459717e-49 | -8.615850e-47 |
| Msa1039020 | Msa1366340 | 0.831588 | 1.533279e-55 | -8.615850e-47 |
| Msa1039020 | Msa1390690 | 0.817280 | 3.579341e-52 | -8.615850e-47 |
| Msa1039020 | Msa1390700 | 0.816956 | 4.233254e-52 | -8.615850e-47 |
| Msa1039020 | Msa1392900 | 0.819542 | 1.099609e-52 | -8.615850e-47 |
| Msa1039020 | Msa1392910 | 0.812058 | 5.132442e-51 | -8.615850e-47 |
| Msa1039020 | Msa1393570 | 0.819736 | 9.932991e-53 | -8.615850e-47 |
| Msa1039020 | Msa1393880 | 0.881911 | 1.618916e-70 | -8.615850e-47 |
| Msa1039020 | Msa1412540 | 0.823304 | 1.488732e-53 | -8.615850e-47 |
| Msa1039020 | Msa1425880 | 0.839741 | 1.321787e-57 | -8.615850e-47 |
| Msa1039020 | Msa1440310 | 0.808630 | 2.817746e-50 | -8.615850e-47 |
| Msa1039020 | Msa1444510 | 0.806115 | 9.619927e-50 | -8.615850e-47 |
| Msa1039020 | Msa1451160 | 0.800992 | 1.111169e-48 | -8.615850e-47 |
| Msa1039020 | Msa1463900 | 0.816678 | 4.886167e-52 | -8.615850e-47 |
| Msa1039020 | Msa1466540 | 0.817765 | 2.782719e-52 | -8.615850e-47 |
| Msa0240900 | Msa1039020 | 0.833065 | 6.604172e-56 | -8.615850e-47 |
| Msa0244640 | Msa1039020 | 0.835364 | 1.752060e-56 | -8.615850e-47 |
| Msa0258310 | Msa1039020 | 0.807001 | 6.256366e-50 | -8.615850e-47 |
| Msa0259220 | Msa1039020 | 0.802540 | 5.345073e-49 | -8.615850e-47 |
| Msa0261340 | Msa1039020 | 0.801323 | 9.507057e-49 | -8.615850e-47 |
| Msa0266180 | Msa1039020 | 0.841115 | 5.777214e-58 | -8.615850e-47 |
| Msa0266350 | Msa1039020 | 0.807670 | 4.512039e-50 | -8.615850e-47 |
| Msa0267270 | Msa1039020 | 0.844765 | 6.174380e-59 | -8.615850e-47 |
| Msa0267370 | Msa1039020 | 0.825732 | 3.993310e-54 | -8.615850e-47 |
| Msa0276740 | Msa1039020 | 0.800697 | 1.276423e-48 | -8.615850e-47 |
| Msa0283330 | Msa1039020 | 0.812979 | 3.227982e-51 | -8.615850e-47 |
| Msa0287740 | Msa1039020 | 0.836786 | 7.629497e-57 | -8.615850e-47 |
| Msa0300270 | Msa1039020 | 0.814016 | 1.909733e-51 | -8.615850e-47 |
| Msa0300320 | Msa1039020 | 0.815731 | 7.953895e-52 | -8.615850e-47 |
| Msa0315690 | Msa1039020 | 0.809226 | 2.100857e-50 | -8.615850e-47 |
| Msa0317970 | Msa1039020 | 0.820348 | 7.192540e-53 | -8.615850e-47 |
| Msa0321620 | Msa1039020 | 0.803608 | 3.214104e-49 | -8.615850e-47 |
| Msa0330340 | Msa1039020 | 0.814461 | 1.522834e-51 | -8.615850e-47 |
| Msa0336310 | Msa1039020 | 0.820590 | 6.329017e-53 | -8.615850e-47 |
| Msa0336320 | Msa1039020 | 0.818311 | 2.093947e-52 | -8.615850e-47 |
| Msa0337700 | Msa1039020 | 0.811723 | 6.071206e-51 | -8.615850e-47 |
| Msa0339250 | Msa1039020 | 0.802663 | 5.042143e-49 | -8.615850e-47 |
| Msa0342010 | Msa1039020 | 0.802187 | 6.320489e-49 | -8.615850e-47 |
| Msa0344930 | Msa1039020 | 0.810171 | 1.315855e-50 | -8.615850e-47 |
| Msa0360210 | Msa1039020 | 0.823650 | 1.235523e-53 | -8.615850e-47 |
| Msa0363790 | Msa1039020 | 0.802618 | 5.150487e-49 | -8.615850e-47 |
| Msa0488560 | Msa1039020 | 0.812491 | 4.127216e-51 | -8.615850e-47 |
| Msa0529890 | Msa1039020 | 0.828825 | 7.249605e-55 | -8.615850e-47 |
| Msa0531180 | Msa1039020 | 0.818486 | 1.911998e-52 | -8.615850e-47 |
| Msa0532960 | Msa1039020 | 0.805739 | 1.154044e-49 | -8.615850e-47 |
| Msa0572840 | Msa1039020 | 0.819701 | 1.011419e-52 | -8.615850e-47 |
| Msa0573180 | Msa1039020 | 0.806255 | 8.987797e-50 | -8.615850e-47 |
| Msa0574390 | Msa1039020 | 0.801030 | 1.091166e-48 | -8.615850e-47 |
| Msa0581470 | Msa1039020 | 0.800936 | 1.140369e-48 | -8.615850e-47 |
| Msa0583360 | Msa1039020 | -0.831725 | 1.418262e-55 | -8.615850e-47 |
| Msa0585560 | Msa1039020 | 0.829489 | 5.003663e-55 | -8.615850e-47 |
| Msa0842790 | Msa1039020 | 0.802676 | 5.009484e-49 | -8.615850e-47 |
| Msa0875290 | Msa1039020 | 0.800449 | 1.433850e-48 | -8.615850e-47 |
| Msa0896410 | Msa1039020 | 0.802413 | 5.675761e-49 | -8.615850e-47 |
| Msa0898750 | Msa1039020 | 0.806265 | 8.945473e-50 | -8.615850e-47 |
| Msa0899980 | Msa1039020 | 0.814462 | 1.522166e-51 | -8.615850e-47 |
| Msa0902510 | Msa1039020 | 0.805302 | 1.425190e-49 | -8.615850e-47 |
| Msa0926470 | Msa1039020 | 0.801799 | 7.592469e-49 | -8.615850e-47 |
| Msa0928130 | Msa1039020 | 0.802611 | 5.168893e-49 | -8.615850e-47 |
| Msa0964840 | Msa1039020 | 0.830802 | 2.392139e-55 | -8.615850e-47 |
| Msa0965360 | Msa1039020 | 0.810490 | 1.123485e-50 | -8.615850e-47 |
| Msa0967380 | Msa1039020 | 0.848361 | 6.436638e-60 | -8.615850e-47 |
| Msa0967870 | Msa1039020 | 0.827337 | 1.654400e-54 | -8.615850e-47 |
| Msa0974080 | Msa1039020 | 0.806180 | 9.324587e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039020 | MtrunA17_Chr7g0273081 | 86.850 | 327 | 12 | 5 | 1 | 320 | 14 | 316 | 0.0 | 556 |
| Msa1039020 | MtrunA17_Chr1g0191571 | 56.232 | 345 | 102 | 13 | 1 | 317 | 14 | 337 | 3.21e-106 | 313 |
| Msa1039020 | MtrunA17_Chr3g0132471 | 50.610 | 328 | 134 | 7 | 1 | 313 | 1 | 315 | 5.29e-101 | 299 |
| Msa1039020 | MtrunA17_Chr5g0426851 | 45.015 | 331 | 132 | 9 | 1 | 315 | 1 | 297 | 4.41e-82 | 250 |
| Msa1039020 | MtrunA17_Chr8g0366551 | 55.869 | 213 | 75 | 4 | 116 | 316 | 114 | 319 | 5.50e-72 | 225 |
| Msa1039020 | MtrunA17_Chr8g0345871 | 53.846 | 195 | 86 | 2 | 116 | 310 | 171 | 361 | 8.04e-57 | 187 |
| Msa1039020 | MtrunA17_Chr0c01g0489461 | 44.298 | 228 | 102 | 7 | 108 | 316 | 177 | 398 | 7.46e-50 | 170 |
| Msa1039020 | MtrunA17_Chr2g0287761 | 40.761 | 184 | 104 | 3 | 126 | 305 | 1 | 183 | 4.60e-35 | 126 |
| Msa1039020 | MtrunA17_Chr1g0158941 | 35.111 | 225 | 118 | 5 | 106 | 305 | 69 | 290 | 1.98e-31 | 119 |
| Msa1039020 | MtrunA17_Chr5g0400661 | 25.352 | 213 | 135 | 7 | 109 | 307 | 131 | 333 | 7.91e-13 | 68.2 |
| Msa1039020 | MtrunA17_Chr3g0126361 | 79.412 | 34 | 7 | 0 | 124 | 157 | 99 | 132 | 7.26e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039020 | AT1G72210.1 | 45.714 | 350 | 127 | 9 | 1 | 317 | 1 | 320 | 2.42e-83 | 254 |
| Msa1039020 | AT1G22490.1 | 44.785 | 326 | 146 | 9 | 1 | 314 | 1 | 304 | 1.78e-73 | 229 |
| Msa1039020 | AT1G72210.2 | 45.000 | 320 | 113 | 9 | 1 | 287 | 1 | 290 | 7.94e-71 | 222 |
| Msa1039020 | AT1G22490.2 | 44.816 | 299 | 131 | 10 | 1 | 287 | 1 | 277 | 4.72e-61 | 197 |
| Msa1039020 | AT4G01460.1 | 48.309 | 207 | 93 | 3 | 116 | 313 | 105 | 306 | 1.28e-55 | 183 |
| Msa1039020 | AT4G01460.2 | 48.309 | 207 | 93 | 3 | 116 | 313 | 105 | 306 | 1.28e-55 | 183 |
| Msa1039020 | AT5G65320.1 | 47.980 | 198 | 97 | 3 | 122 | 313 | 98 | 295 | 2.26e-52 | 174 |
| Msa1039020 | AT2G46810.2 | 47.150 | 193 | 95 | 3 | 117 | 308 | 112 | 298 | 1.46e-51 | 172 |
| Msa1039020 | AT2G46810.3 | 47.150 | 193 | 95 | 3 | 117 | 308 | 172 | 358 | 9.30e-51 | 172 |
| Msa1039020 | AT2G46810.1 | 47.150 | 193 | 95 | 3 | 117 | 308 | 184 | 370 | 1.27e-50 | 172 |
| Msa1039020 | AT3G24140.1 | 41.850 | 227 | 115 | 3 | 106 | 316 | 177 | 402 | 4.43e-49 | 169 |
| Msa1039020 | AT5G46690.1 | 44.397 | 232 | 88 | 5 | 116 | 313 | 78 | 302 | 4.99e-49 | 167 |
| Msa1039020 | AT3G24140.2 | 40.343 | 233 | 122 | 3 | 100 | 316 | 171 | 402 | 1.72e-48 | 167 |
| Msa1039020 | AT3G61950.2 | 46.154 | 195 | 97 | 2 | 115 | 308 | 116 | 303 | 3.28e-47 | 161 |
| Msa1039020 | AT3G61950.1 | 46.154 | 195 | 97 | 2 | 115 | 308 | 167 | 354 | 1.92e-46 | 160 |
| Msa1039020 | AT2G46810.4 | 41.629 | 221 | 94 | 4 | 117 | 308 | 112 | 326 | 7.16e-46 | 158 |
| Msa1039020 | AT5G65320.2 | 49.708 | 171 | 81 | 2 | 122 | 287 | 98 | 268 | 1.18e-45 | 156 |
| Msa1039020 | AT3G61950.6 | 46.875 | 160 | 78 | 1 | 115 | 274 | 116 | 268 | 5.01e-40 | 142 |
| Msa1039020 | AT3G61950.3 | 46.875 | 160 | 78 | 1 | 115 | 274 | 167 | 319 | 4.00e-39 | 141 |
| Msa1039020 | AT5G46690.2 | 43.204 | 206 | 76 | 5 | 116 | 287 | 78 | 276 | 4.58e-38 | 137 |
| Msa1039020 | AT3G06120.1 | 37.696 | 191 | 107 | 3 | 126 | 305 | 1 | 190 | 3.11e-32 | 119 |
| Msa1039020 | AT5G53210.2 | 61.538 | 65 | 25 | 0 | 124 | 188 | 100 | 164 | 2.94e-20 | 90.5 |
| Msa1039020 | AT5G53210.1 | 61.538 | 65 | 25 | 0 | 124 | 188 | 100 | 164 | 3.95e-20 | 90.1 |
| Msa1039020 | AT3G61950.4 | 72.093 | 43 | 12 | 0 | 115 | 157 | 167 | 209 | 4.66e-14 | 70.5 |
| Msa1039020 | AT3G61950.5 | 72.093 | 43 | 12 | 0 | 115 | 157 | 167 | 209 | 4.66e-14 | 70.5 |
Find 49 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATTATGCTTATGGAAAT+TGG | 0.223168 | 7_1:-76044879 | Msa1039020:CDS |
| GTTGAATTCTTTCCAACATT+TGG | 0.255390 | 7_1:+76043820 | None:intergenic |
| ACCATCTTCAAGAGCTGTTT+TGG | 0.261447 | 7_1:+76044146 | None:intergenic |
| GGTGATCAAGCATCAATTAT+TGG | 0.265730 | 7_1:-76044422 | Msa1039020:CDS |
| GAGCAGAAGCTACAATTTCT+TGG | 0.311027 | 7_1:-76044371 | Msa1039020:CDS |
| GTGATCAAGCATCAATTATT+GGG | 0.314095 | 7_1:-76044421 | Msa1039020:CDS |
| CATCAGCTGTAGTGACATTA+AGG | 0.320979 | 7_1:+76044087 | None:intergenic |
| ACCCTTTGGACGTAAGATTC+AGG | 0.337296 | 7_1:+76044610 | None:intergenic |
| TTGCTTCAGAATCTGTTAAC+AGG | 0.346873 | 7_1:+76044983 | None:intergenic |
| CAAACAGAGAATTATGCTTA+TGG | 0.362320 | 7_1:-76044886 | Msa1039020:CDS |
| AAGCATAATTCTCTGTTTGT+TGG | 0.375728 | 7_1:+76044890 | None:intergenic |
| GTTGAAGATGATTGCAAGCT+TGG | 0.385709 | 7_1:-76043873 | Msa1039020:CDS |
| CTTCTATTCTCTCAGCGTTA+AGG | 0.389267 | 7_1:-76044057 | Msa1039020:intron |
| ACAATCATTGTTGCCACAAA+TGG | 0.405629 | 7_1:-76044818 | Msa1039020:CDS |
| ACTTTAAGATCTCTTGATGA+TGG | 0.419411 | 7_1:-76043730 | Msa1039020:three_prime_UTR |
| CCACAAGACCCTTTCACCTA+TGG | 0.431613 | 7_1:-76045033 | Msa1039020:CDS |
| AACAATGATTGTGGTGGTGG+TGG | 0.445781 | 7_1:+76044829 | None:intergenic |
| TTAACAGGTTGTAATTGTAA+TGG | 0.451750 | 7_1:+76044998 | None:intergenic |
| ACCAAAACAGCTCTTGAAGA+TGG | 0.460812 | 7_1:-76044147 | Msa1039020:CDS |
| ACATTGCTGTAGAACGCAAC+AGG | 0.469202 | 7_1:-76044678 | Msa1039020:CDS |
| TTCTTACTTTGAGATTTGCA+TGG | 0.473698 | 7_1:+76044180 | None:intergenic |
| GAAATTGAACTATCTAAAGA+TGG | 0.481389 | 7_1:+76044781 | None:intergenic |
| TGTTGAATCCATAGGTGAAA+GGG | 0.493303 | 7_1:+76045025 | None:intergenic |
| AAGATGGTTTCTAGTTTGCA+TGG | 0.504712 | 7_1:-76044131 | Msa1039020:CDS |
| GGCAACAATGATTGTGGTGG+TGG | 0.505665 | 7_1:+76044826 | None:intergenic |
| TTTGACACTTCATCCATTTG+TGG | 0.511454 | 7_1:+76044805 | None:intergenic |
| TGCCTGAATCTTACGTCCAA+AGG | 0.512531 | 7_1:-76044612 | Msa1039020:CDS |
| AATGATTGTGGTGGTGGTGG+TGG | 0.519994 | 7_1:+76044832 | None:intergenic |
| GCCTGAATCTTACGTCCAAA+GGG | 0.523230 | 7_1:-76044611 | Msa1039020:intron |
| TCTTGTGGATATAGTAGAGT+TGG | 0.525531 | 7_1:+76045048 | None:intergenic |
| CTGTCACTTGTTGAGTATTG+TGG | 0.536473 | 7_1:+76044287 | None:intergenic |
| AACCTTCAAAATCAAGTACA+AGG | 0.537192 | 7_1:-76044940 | Msa1039020:CDS |
| TTGTTGAATCCATAGGTGAA+AGG | 0.539793 | 7_1:+76045024 | None:intergenic |
| TAGAGTTGGTTCTAGTGCCA+TGG | 0.564316 | 7_1:+76045062 | None:intergenic |
| CCATAGGTGAAAGGGTCTTG+TGG | 0.567251 | 7_1:+76045033 | None:intergenic |
| AAACAGCCTATGCAATAACT+AGG | 0.570827 | 7_1:+76043663 | None:intergenic |
| ATGGTCTTTGTTGAATCCAT+AGG | 0.572517 | 7_1:+76045017 | None:intergenic |
| TGCAGCTGTAAACCAAATGT+TGG | 0.577098 | 7_1:-76043832 | Msa1039020:CDS |
| GATGTACCTAGTTATTGCAT+AGG | 0.579097 | 7_1:-76043669 | Msa1039020:three_prime_UTR |
| TGATTGCAAGCTTGGATCAG+TGG | 0.587540 | 7_1:-76043865 | Msa1039020:CDS |
| CAGAAGCTACAATTTCTTGG+TGG | 0.593039 | 7_1:-76044368 | Msa1039020:CDS |
| TGATCAAGCATCAATTATTG+GGG | 0.599410 | 7_1:-76044420 | Msa1039020:CDS |
| TAGAGAAAGAGAGAGATCCA+TGG | 0.615999 | 7_1:-76045079 | Msa1039020:exon |
| AACTAGGTACATCTTGAGAG+AGG | 0.642765 | 7_1:+76043679 | None:intergenic |
| TGCTGATATTGAAGTGACAA+TGG | 0.646131 | 7_1:-76044210 | Msa1039020:CDS |
| ATTTGTGGCAACAATGATTG+TGG | 0.649128 | 7_1:+76044820 | None:intergenic |
| ACTTGTTGAGTATTGTGGAA+AGG | 0.653314 | 7_1:+76044292 | None:intergenic |
| TGTGGCAACAATGATTGTGG+TGG | 0.680500 | 7_1:+76044823 | None:intergenic |
| GATCAAGCATCAATTATTGG+GGG | 0.757063 | 7_1:-76044419 | Msa1039020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTATTTTGTAATTTGT+AGG | - | chr7_1:76044807-76044826 | Msa1039020:CDS | 10.0% |
| !! | ATCTTAAAGTTAAAAAAAAA+AGG | + | chr7_1:76044962-76044981 | None:intergenic | 10.0% |
| !!! | AATTTTATTTTGTAATTTGT+AGG | - | chr7_1:76044807-76044826 | Msa1039020:CDS | 10.0% |
| !! | ATCTTAAAGTTAAAAAAAAA+AGG | + | chr7_1:76044962-76044981 | None:intergenic | 10.0% |
| !!! | TCATTTTTAAATTGAAATTG+CGG | + | chr7_1:76044232-76044251 | None:intergenic | 15.0% |
| !!! | TCTTATATTATTTGATTTTC+TGG | - | chr7_1:76045087-76045106 | Msa1039020:five_prime_UTR | 15.0% |
| !!! | TCATTTTTAAATTGAAATTG+CGG | + | chr7_1:76044232-76044251 | None:intergenic | 15.0% |
| !!! | CTTCTATTACTTTTAAATTG+CGG | - | chr7_1:76044116-76044135 | Msa1039020:CDS | 20.0% |
| !! | AAGAAAAAAAAAACATGACA+GGG | + | chr7_1:76044685-76044704 | None:intergenic | 20.0% |
| !! | TTAAGTGCTTACAATAATTT+AGG | + | chr7_1:76044760-76044779 | None:intergenic | 20.0% |
| !!! | CTTCTATTACTTTTAAATTG+CGG | - | chr7_1:76044116-76044135 | Msa1039020:CDS | 20.0% |
| !! | AAGAAAAAAAAAACATGACA+GGG | + | chr7_1:76044685-76044704 | None:intergenic | 20.0% |
| !! | TTAAGTGCTTACAATAATTT+AGG | + | chr7_1:76044760-76044779 | None:intergenic | 20.0% |
| ! | TTAACAGGTTGTAATTGTAA+TGG | + | chr7_1:76043707-76043726 | None:intergenic | 25.0% |
| ! | AGAATTATGCTTATGGAAAT+TGG | - | chr7_1:76043823-76043842 | Msa1039020:CDS | 25.0% |
| ! | GAAATTGAACTATCTAAAGA+TGG | + | chr7_1:76043924-76043943 | None:intergenic | 25.0% |
| !!! | TTTTGATTGATGAATTTTGC+AGG | - | chr7_1:76044258-76044277 | Msa1039020:CDS | 25.0% |
| !! | TTTGATTGATGAATTTTGCA+GGG | - | chr7_1:76044259-76044278 | Msa1039020:CDS | 25.0% |
| ! | AAGGTGAAAAATTCAGAAAA+GGG | + | chr7_1:76044394-76044413 | None:intergenic | 25.0% |
| ! | AAAGGTGAAAAATTCAGAAA+AGG | + | chr7_1:76044395-76044414 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAAAAACATGAC+AGG | + | chr7_1:76044686-76044705 | None:intergenic | 25.0% |
| ! | TTAACAGGTTGTAATTGTAA+TGG | + | chr7_1:76043707-76043726 | None:intergenic | 25.0% |
| ! | AGAATTATGCTTATGGAAAT+TGG | - | chr7_1:76043823-76043842 | Msa1039020:CDS | 25.0% |
| ! | GAAATTGAACTATCTAAAGA+TGG | + | chr7_1:76043924-76043943 | None:intergenic | 25.0% |
| !!! | TTTTGATTGATGAATTTTGC+AGG | - | chr7_1:76044258-76044277 | Msa1039020:CDS | 25.0% |
| !! | TTTGATTGATGAATTTTGCA+GGG | - | chr7_1:76044259-76044278 | Msa1039020:CDS | 25.0% |
| ! | AAGGTGAAAAATTCAGAAAA+GGG | + | chr7_1:76044394-76044413 | None:intergenic | 25.0% |
| ! | AAAGGTGAAAAATTCAGAAA+AGG | + | chr7_1:76044395-76044414 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAAAAACATGAC+AGG | + | chr7_1:76044686-76044705 | None:intergenic | 25.0% |
| !! | TTGATTTTGAAGGTTGAAGT+TGG | + | chr7_1:76043757-76043776 | None:intergenic | 30.0% |
| AACCTTCAAAATCAAGTACA+AGG | - | chr7_1:76043762-76043781 | Msa1039020:three_prime_UTR | 30.0% | |
| ! | AACCTTGTACTTGATTTTGA+AGG | + | chr7_1:76043767-76043786 | None:intergenic | 30.0% |
| AAGCATAATTCTCTGTTTGT+TGG | + | chr7_1:76043815-76043834 | None:intergenic | 30.0% | |
| CAAACAGAGAATTATGCTTA+TGG | - | chr7_1:76043816-76043835 | Msa1039020:CDS | 30.0% | |
| !! | AAAGTAATAGAAGTACCCTT+TGG | + | chr7_1:76044109-76044128 | None:intergenic | 30.0% |
| ! | TGCATTTTGCCTCAATATAA+AGG | + | chr7_1:76044166-76044185 | None:intergenic | 30.0% |
| GTGATCAAGCATCAATTATT+GGG | - | chr7_1:76044281-76044300 | Msa1039020:CDS | 30.0% | |
| TGATCAAGCATCAATTATTG+GGG | - | chr7_1:76044282-76044301 | Msa1039020:CDS | 30.0% | |
| !! | TTCTTACTTTGAGATTTGCA+TGG | + | chr7_1:76044525-76044544 | None:intergenic | 30.0% |
| GCTAAAAAGTGGTTAGAATT+TGG | + | chr7_1:76044715-76044734 | None:intergenic | 30.0% | |
| TTCAAGAGAAAGCTAAAAAG+TGG | + | chr7_1:76044726-76044745 | None:intergenic | 30.0% | |
| GTTGAATTCTTTCCAACATT+TGG | + | chr7_1:76044885-76044904 | None:intergenic | 30.0% | |
| !! | ACTTTAAGATCTCTTGATGA+TGG | - | chr7_1:76044972-76044991 | Msa1039020:CDS | 30.0% |
| !! | TTGATTTTGAAGGTTGAAGT+TGG | + | chr7_1:76043757-76043776 | None:intergenic | 30.0% |
| AACCTTCAAAATCAAGTACA+AGG | - | chr7_1:76043762-76043781 | Msa1039020:three_prime_UTR | 30.0% | |
| ! | AACCTTGTACTTGATTTTGA+AGG | + | chr7_1:76043767-76043786 | None:intergenic | 30.0% |
| AAGCATAATTCTCTGTTTGT+TGG | + | chr7_1:76043815-76043834 | None:intergenic | 30.0% | |
| CAAACAGAGAATTATGCTTA+TGG | - | chr7_1:76043816-76043835 | Msa1039020:CDS | 30.0% | |
| !! | AAAGTAATAGAAGTACCCTT+TGG | + | chr7_1:76044109-76044128 | None:intergenic | 30.0% |
| ! | TGCATTTTGCCTCAATATAA+AGG | + | chr7_1:76044166-76044185 | None:intergenic | 30.0% |
| GTGATCAAGCATCAATTATT+GGG | - | chr7_1:76044281-76044300 | Msa1039020:CDS | 30.0% | |
| TGATCAAGCATCAATTATTG+GGG | - | chr7_1:76044282-76044301 | Msa1039020:CDS | 30.0% | |
| !! | TTCTTACTTTGAGATTTGCA+TGG | + | chr7_1:76044525-76044544 | None:intergenic | 30.0% |
| GCTAAAAAGTGGTTAGAATT+TGG | + | chr7_1:76044715-76044734 | None:intergenic | 30.0% | |
| TTCAAGAGAAAGCTAAAAAG+TGG | + | chr7_1:76044726-76044745 | None:intergenic | 30.0% | |
| GTTGAATTCTTTCCAACATT+TGG | + | chr7_1:76044885-76044904 | None:intergenic | 30.0% | |
| !! | ACTTTAAGATCTCTTGATGA+TGG | - | chr7_1:76044972-76044991 | Msa1039020:CDS | 30.0% |
| TCTTGTGGATATAGTAGAGT+TGG | + | chr7_1:76043657-76043676 | None:intergenic | 35.0% | |
| TGTTGAATCCATAGGTGAAA+GGG | + | chr7_1:76043680-76043699 | None:intergenic | 35.0% | |
| TTGTTGAATCCATAGGTGAA+AGG | + | chr7_1:76043681-76043700 | None:intergenic | 35.0% | |
| ATGGTCTTTGTTGAATCCAT+AGG | + | chr7_1:76043688-76043707 | None:intergenic | 35.0% | |
| TTGCTTCAGAATCTGTTAAC+AGG | + | chr7_1:76043722-76043741 | None:intergenic | 35.0% | |
| ATTTGTGGCAACAATGATTG+TGG | + | chr7_1:76043885-76043904 | None:intergenic | 35.0% | |
| ACAATCATTGTTGCCACAAA+TGG | - | chr7_1:76043884-76043903 | Msa1039020:intron | 35.0% | |
| TTTGACACTTCATCCATTTG+TGG | + | chr7_1:76043900-76043919 | None:intergenic | 35.0% | |
| TGCTGCAAACCTTTATATTG+AGG | - | chr7_1:76044154-76044173 | Msa1039020:CDS | 35.0% | |
| GGTGATCAAGCATCAATTAT+TGG | - | chr7_1:76044280-76044299 | Msa1039020:CDS | 35.0% | |
| GATCAAGCATCAATTATTGG+GGG | - | chr7_1:76044283-76044302 | Msa1039020:CDS | 35.0% | |
| TGGTGTTCAGAAACAAAAAG+AGG | - | chr7_1:76044354-76044373 | Msa1039020:CDS | 35.0% | |
| ! | ACTTGTTGAGTATTGTGGAA+AGG | + | chr7_1:76044413-76044432 | None:intergenic | 35.0% |
| !! | TGAGAGTTCTGAGACAAAAA+TGG | - | chr7_1:76044444-76044463 | Msa1039020:intron | 35.0% |
| !! | GAGAGTTCTGAGACAAAAAT+GGG | - | chr7_1:76044445-76044464 | Msa1039020:intron | 35.0% |
| TGCTGATATTGAAGTGACAA+TGG | - | chr7_1:76044492-76044511 | Msa1039020:intron | 35.0% | |
| !! | AAGATGGTTTCTAGTTTGCA+TGG | - | chr7_1:76044571-76044590 | Msa1039020:intron | 35.0% |
| AGTGGTTAGAATTTGGAAAG+TGG | + | chr7_1:76044708-76044727 | None:intergenic | 35.0% | |
| GATGTACCTAGTTATTGCAT+AGG | - | chr7_1:76045033-76045052 | Msa1039020:CDS | 35.0% | |
| AAACAGCCTATGCAATAACT+AGG | + | chr7_1:76045042-76045061 | None:intergenic | 35.0% | |
| TCTTGTGGATATAGTAGAGT+TGG | + | chr7_1:76043657-76043676 | None:intergenic | 35.0% | |
| TGTTGAATCCATAGGTGAAA+GGG | + | chr7_1:76043680-76043699 | None:intergenic | 35.0% | |
| TTGTTGAATCCATAGGTGAA+AGG | + | chr7_1:76043681-76043700 | None:intergenic | 35.0% | |
| ATGGTCTTTGTTGAATCCAT+AGG | + | chr7_1:76043688-76043707 | None:intergenic | 35.0% | |
| TTGCTTCAGAATCTGTTAAC+AGG | + | chr7_1:76043722-76043741 | None:intergenic | 35.0% | |
| ATTTGTGGCAACAATGATTG+TGG | + | chr7_1:76043885-76043904 | None:intergenic | 35.0% | |
| ACAATCATTGTTGCCACAAA+TGG | - | chr7_1:76043884-76043903 | Msa1039020:intron | 35.0% | |
| TTTGACACTTCATCCATTTG+TGG | + | chr7_1:76043900-76043919 | None:intergenic | 35.0% | |
| TGCTGCAAACCTTTATATTG+AGG | - | chr7_1:76044154-76044173 | Msa1039020:CDS | 35.0% | |
| GGTGATCAAGCATCAATTAT+TGG | - | chr7_1:76044280-76044299 | Msa1039020:CDS | 35.0% | |
| GATCAAGCATCAATTATTGG+GGG | - | chr7_1:76044283-76044302 | Msa1039020:CDS | 35.0% | |
| TGGTGTTCAGAAACAAAAAG+AGG | - | chr7_1:76044354-76044373 | Msa1039020:CDS | 35.0% | |
| ! | ACTTGTTGAGTATTGTGGAA+AGG | + | chr7_1:76044413-76044432 | None:intergenic | 35.0% |
| !! | TGAGAGTTCTGAGACAAAAA+TGG | - | chr7_1:76044444-76044463 | Msa1039020:intron | 35.0% |
| !! | GAGAGTTCTGAGACAAAAAT+GGG | - | chr7_1:76044445-76044464 | Msa1039020:intron | 35.0% |
| TGCTGATATTGAAGTGACAA+TGG | - | chr7_1:76044492-76044511 | Msa1039020:intron | 35.0% | |
| !! | AAGATGGTTTCTAGTTTGCA+TGG | - | chr7_1:76044571-76044590 | Msa1039020:intron | 35.0% |
| AGTGGTTAGAATTTGGAAAG+TGG | + | chr7_1:76044708-76044727 | None:intergenic | 35.0% | |
| GATGTACCTAGTTATTGCAT+AGG | - | chr7_1:76045033-76045052 | Msa1039020:CDS | 35.0% | |
| AAACAGCCTATGCAATAACT+AGG | + | chr7_1:76045042-76045061 | None:intergenic | 35.0% | |
| TAGAGAAAGAGAGAGATCCA+TGG | - | chr7_1:76043623-76043642 | Msa1039020:three_prime_UTR | 40.0% | |
| !!! | TGTTTTGACTCTGCGTTTCT+TGG | + | chr7_1:76043964-76043983 | None:intergenic | 40.0% |
| GAGGCAAAATGCAGAAATTG+CGG | - | chr7_1:76044173-76044192 | Msa1039020:CDS | 40.0% | |
| CTGCAAGAGAAACGATTCTA+AGG | + | chr7_1:76044209-76044228 | None:intergenic | 40.0% | |
| GAGCAGAAGCTACAATTTCT+TGG | - | chr7_1:76044331-76044350 | Msa1039020:CDS | 40.0% | |
| CAGAAGCTACAATTTCTTGG+TGG | - | chr7_1:76044334-76044353 | Msa1039020:CDS | 40.0% | |
| ! | CTGTCACTTGTTGAGTATTG+TGG | + | chr7_1:76044418-76044437 | None:intergenic | 40.0% |
| !! | AGTTCTGAGACAAAAATGGG+TGG | - | chr7_1:76044448-76044467 | Msa1039020:intron | 40.0% |
| ACCAAAACAGCTCTTGAAGA+TGG | - | chr7_1:76044555-76044574 | Msa1039020:intron | 40.0% | |
| ! | ACCATCTTCAAGAGCTGTTT+TGG | + | chr7_1:76044559-76044578 | None:intergenic | 40.0% |
| CATCAGCTGTAGTGACATTA+AGG | + | chr7_1:76044618-76044637 | None:intergenic | 40.0% | |
| CTTCTATTCTCTCAGCGTTA+AGG | - | chr7_1:76044645-76044664 | Msa1039020:CDS | 40.0% | |
| AGCGTTAAGGTAATTGTCTG+TGG | - | chr7_1:76044658-76044677 | Msa1039020:CDS | 40.0% | |
| GTTGAAGATGATTGCAAGCT+TGG | - | chr7_1:76044829-76044848 | Msa1039020:CDS | 40.0% | |
| TGCAGCTGTAAACCAAATGT+TGG | - | chr7_1:76044870-76044889 | Msa1039020:CDS | 40.0% | |
| AACTAGGTACATCTTGAGAG+AGG | + | chr7_1:76045026-76045045 | None:intergenic | 40.0% | |
| TAGAGAAAGAGAGAGATCCA+TGG | - | chr7_1:76043623-76043642 | Msa1039020:three_prime_UTR | 40.0% | |
| !!! | TGTTTTGACTCTGCGTTTCT+TGG | + | chr7_1:76043964-76043983 | None:intergenic | 40.0% |
| GAGGCAAAATGCAGAAATTG+CGG | - | chr7_1:76044173-76044192 | Msa1039020:CDS | 40.0% | |
| CTGCAAGAGAAACGATTCTA+AGG | + | chr7_1:76044209-76044228 | None:intergenic | 40.0% | |
| GAGCAGAAGCTACAATTTCT+TGG | - | chr7_1:76044331-76044350 | Msa1039020:CDS | 40.0% | |
| CAGAAGCTACAATTTCTTGG+TGG | - | chr7_1:76044334-76044353 | Msa1039020:CDS | 40.0% | |
| ! | CTGTCACTTGTTGAGTATTG+TGG | + | chr7_1:76044418-76044437 | None:intergenic | 40.0% |
| !! | AGTTCTGAGACAAAAATGGG+TGG | - | chr7_1:76044448-76044467 | Msa1039020:intron | 40.0% |
| ACCAAAACAGCTCTTGAAGA+TGG | - | chr7_1:76044555-76044574 | Msa1039020:intron | 40.0% | |
| ! | ACCATCTTCAAGAGCTGTTT+TGG | + | chr7_1:76044559-76044578 | None:intergenic | 40.0% |
| CATCAGCTGTAGTGACATTA+AGG | + | chr7_1:76044618-76044637 | None:intergenic | 40.0% | |
| CTTCTATTCTCTCAGCGTTA+AGG | - | chr7_1:76044645-76044664 | Msa1039020:CDS | 40.0% | |
| AGCGTTAAGGTAATTGTCTG+TGG | - | chr7_1:76044658-76044677 | Msa1039020:CDS | 40.0% | |
| GTTGAAGATGATTGCAAGCT+TGG | - | chr7_1:76044829-76044848 | Msa1039020:CDS | 40.0% | |
| TGCAGCTGTAAACCAAATGT+TGG | - | chr7_1:76044870-76044889 | Msa1039020:CDS | 40.0% | |
| AACTAGGTACATCTTGAGAG+AGG | + | chr7_1:76045026-76045045 | None:intergenic | 40.0% | |
| !! | TAGAGTTGGTTCTAGTGCCA+TGG | + | chr7_1:76043643-76043662 | None:intergenic | 45.0% |
| !! | AACAATGATTGTGGTGGTGG+TGG | + | chr7_1:76043876-76043895 | None:intergenic | 45.0% |
| TGTGGCAACAATGATTGTGG+TGG | + | chr7_1:76043882-76043901 | None:intergenic | 45.0% | |
| ACATTGCTGTAGAACGCAAC+AGG | - | chr7_1:76044024-76044043 | Msa1039020:intron | 45.0% | |
| TGCCTGAATCTTACGTCCAA+AGG | - | chr7_1:76044090-76044109 | Msa1039020:CDS | 45.0% | |
| GCCTGAATCTTACGTCCAAA+GGG | - | chr7_1:76044091-76044110 | Msa1039020:CDS | 45.0% | |
| ACCCTTTGGACGTAAGATTC+AGG | + | chr7_1:76044095-76044114 | None:intergenic | 45.0% | |
| TGAGACAAAAATGGGTGGTG+AGG | - | chr7_1:76044453-76044472 | Msa1039020:intron | 45.0% | |
| TGATTGCAAGCTTGGATCAG+TGG | - | chr7_1:76044837-76044856 | Msa1039020:CDS | 45.0% | |
| !! | TAGAGTTGGTTCTAGTGCCA+TGG | + | chr7_1:76043643-76043662 | None:intergenic | 45.0% |
| !! | AACAATGATTGTGGTGGTGG+TGG | + | chr7_1:76043876-76043895 | None:intergenic | 45.0% |
| TGTGGCAACAATGATTGTGG+TGG | + | chr7_1:76043882-76043901 | None:intergenic | 45.0% | |
| ACATTGCTGTAGAACGCAAC+AGG | - | chr7_1:76044024-76044043 | Msa1039020:intron | 45.0% | |
| TGCCTGAATCTTACGTCCAA+AGG | - | chr7_1:76044090-76044109 | Msa1039020:CDS | 45.0% | |
| GCCTGAATCTTACGTCCAAA+GGG | - | chr7_1:76044091-76044110 | Msa1039020:CDS | 45.0% | |
| ACCCTTTGGACGTAAGATTC+AGG | + | chr7_1:76044095-76044114 | None:intergenic | 45.0% | |
| TGAGACAAAAATGGGTGGTG+AGG | - | chr7_1:76044453-76044472 | Msa1039020:intron | 45.0% | |
| TGATTGCAAGCTTGGATCAG+TGG | - | chr7_1:76044837-76044856 | Msa1039020:CDS | 45.0% | |
| CCATAGGTGAAAGGGTCTTG+TGG | + | chr7_1:76043672-76043691 | None:intergenic | 50.0% | |
| CCACAAGACCCTTTCACCTA+TGG | - | chr7_1:76043669-76043688 | Msa1039020:three_prime_UTR | 50.0% | |
| !! | AATGATTGTGGTGGTGGTGG+TGG | + | chr7_1:76043873-76043892 | None:intergenic | 50.0% |
| GGCAACAATGATTGTGGTGG+TGG | + | chr7_1:76043879-76043898 | None:intergenic | 50.0% | |
| CCATAGGTGAAAGGGTCTTG+TGG | + | chr7_1:76043672-76043691 | None:intergenic | 50.0% | |
| CCACAAGACCCTTTCACCTA+TGG | - | chr7_1:76043669-76043688 | Msa1039020:three_prime_UTR | 50.0% | |
| !! | AATGATTGTGGTGGTGGTGG+TGG | + | chr7_1:76043873-76043892 | None:intergenic | 50.0% |
| GGCAACAATGATTGTGGTGG+TGG | + | chr7_1:76043879-76043898 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 76043617 | 76045107 | 76043617 | ID=Msa1039020;Name=Msa1039020 |
| chr7_1 | mRNA | 76043617 | 76045107 | 76043617 | ID=Msa1039020-mRNA-1;Parent=Msa1039020;Name=Msa1039020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=25|1|1|1|1|1|3|174|320 |
| chr7_1 | exon | 76043617 | 76043895 | 76043617 | ID=Msa1039020-mRNA-1:exon:19640;Parent=Msa1039020-mRNA-1 |
| chr7_1 | exon | 76044058 | 76044444 | 76044058 | ID=Msa1039020-mRNA-1:exon:19639;Parent=Msa1039020-mRNA-1 |
| chr7_1 | exon | 76044612 | 76045107 | 76044612 | ID=Msa1039020-mRNA-1:exon:19638;Parent=Msa1039020-mRNA-1 |
| chr7_1 | five_prime_UTR | 76045083 | 76045107 | 76045083 | ID=Msa1039020-mRNA-1:five_prime_utr;Parent=Msa1039020-mRNA-1 |
| chr7_1 | CDS | 76044612 | 76045082 | 76044612 | ID=Msa1039020-mRNA-1:cds;Parent=Msa1039020-mRNA-1 |
| chr7_1 | CDS | 76044058 | 76044444 | 76044058 | ID=Msa1039020-mRNA-1:cds;Parent=Msa1039020-mRNA-1 |
| chr7_1 | CDS | 76043791 | 76043895 | 76043791 | ID=Msa1039020-mRNA-1:cds;Parent=Msa1039020-mRNA-1 |
| chr7_1 | three_prime_UTR | 76043617 | 76043790 | 76043617 | ID=Msa1039020-mRNA-1:three_prime_utr;Parent=Msa1039020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
