Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357790 | AES61472.2 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357790 | sp|Q9FP29|KNOS1_ORYSJ | 58.268 | 254 | 99 | 3 | 12 | 262 | 38 | 287 | 2.94e-90 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357790 | G7I9I1 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1357790 | TF | HB-KNOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1357790 | 0.809290 | 2.035692e-50 | -8.615850e-47 |
| Msa0001940 | Msa1357790 | 0.831140 | 1.976090e-55 | -8.615850e-47 |
| Msa0003700 | Msa1357790 | 0.820296 | 7.393917e-53 | -8.615850e-47 |
| Msa0017670 | Msa1357790 | 0.807362 | 5.246303e-50 | -8.615850e-47 |
| Msa0017950 | Msa1357790 | 0.821226 | 4.517712e-53 | -8.615850e-47 |
| Msa0024550 | Msa1357790 | 0.836969 | 6.853464e-57 | -8.615850e-47 |
| Msa0042610 | Msa1357790 | 0.807845 | 4.142793e-50 | -8.615850e-47 |
| Msa0080580 | Msa1357790 | 0.908021 | 2.692563e-81 | -8.615850e-47 |
| Msa0092790 | Msa1357790 | 0.816914 | 4.326336e-52 | -8.615850e-47 |
| Msa0097770 | Msa1357790 | 0.832188 | 1.090065e-55 | -8.615850e-47 |
| Msa0098040 | Msa1357790 | 0.837183 | 6.041300e-57 | -8.615850e-47 |
| Msa0117140 | Msa1357790 | 0.810764 | 9.798138e-51 | -8.615850e-47 |
| Msa0120400 | Msa1357790 | 0.839558 | 1.475120e-57 | -8.615850e-47 |
| Msa1357790 | Msa1366340 | 0.815894 | 7.316055e-52 | -8.615850e-47 |
| Msa1357790 | Msa1373100 | 0.821473 | 3.962755e-53 | -8.615850e-47 |
| Msa1357790 | Msa1385890 | 0.801837 | 7.457049e-49 | -8.615850e-47 |
| Msa1357790 | Msa1392910 | 0.803168 | 3.965602e-49 | -8.615850e-47 |
| Msa1357790 | Msa1422950 | 0.821444 | 4.024993e-53 | -8.615850e-47 |
| Msa1357790 | Msa1425880 | 0.814024 | 1.901448e-51 | -8.615850e-47 |
| Msa1357790 | Msa1446810 | 0.808914 | 2.450452e-50 | -8.615850e-47 |
| Msa1357790 | Msa1451160 | 0.811326 | 7.405338e-51 | -8.615850e-47 |
| Msa0614000 | Msa1357790 | 0.806320 | 8.710277e-50 | -8.615850e-47 |
| Msa0626510 | Msa1357790 | 0.800325 | 1.519781e-48 | -8.615850e-47 |
| Msa0638480 | Msa1357790 | 0.824400 | 8.239280e-54 | -8.615850e-47 |
| Msa0762910 | Msa1357790 | 0.806438 | 8.227445e-50 | -8.615850e-47 |
| Msa0769180 | Msa1357790 | 0.808303 | 3.309022e-50 | -8.615850e-47 |
| Msa0792370 | Msa1357790 | 0.805511 | 1.288471e-49 | -8.615850e-47 |
| Msa0795870 | Msa1357790 | 0.807549 | 4.788457e-50 | -8.615850e-47 |
| Msa0805330 | Msa1357790 | 0.823948 | 1.052174e-53 | -8.615850e-47 |
| Msa0829300 | Msa1357790 | 0.802963 | 4.371657e-49 | -8.615850e-47 |
| Msa0829330 | Msa1357790 | 0.812767 | 3.592660e-51 | -8.615850e-47 |
| Msa0832340 | Msa1357790 | 0.800608 | 1.330408e-48 | -8.615850e-47 |
| Msa0833650 | Msa1357790 | 0.809605 | 1.741858e-50 | -8.615850e-47 |
| Msa0124060 | Msa1357790 | 0.801428 | 9.047641e-49 | -8.615850e-47 |
| Msa0131900 | Msa1357790 | 0.800200 | 1.611110e-48 | -8.615850e-47 |
| Msa0164330 | Msa1357790 | 0.827592 | 1.436901e-54 | -8.615850e-47 |
| Msa0168500 | Msa1357790 | 0.806175 | 9.344353e-50 | -8.615850e-47 |
| Msa0186010 | Msa1357790 | 0.949317 | 1.624660e-107 | -8.615850e-47 |
| Msa0197100 | Msa1357790 | 0.850716 | 1.418848e-60 | -8.615850e-47 |
| Msa0211150 | Msa1357790 | 0.808796 | 2.597279e-50 | -8.615850e-47 |
| Msa0214550 | Msa1357790 | 0.809763 | 1.611453e-50 | -8.615850e-47 |
| Msa0221000 | Msa1357790 | 0.819954 | 8.852362e-53 | -8.615850e-47 |
| Msa0224780 | Msa1357790 | 0.806772 | 6.992413e-50 | -8.615850e-47 |
| Msa0225100 | Msa1357790 | 0.829079 | 6.292240e-55 | -8.615850e-47 |
| Msa1228200 | Msa1357790 | 0.830021 | 3.713244e-55 | -8.615850e-47 |
| Msa1236410 | Msa1357790 | 0.809942 | 1.474748e-50 | -8.615850e-47 |
| Msa1238820 | Msa1357790 | 0.802667 | 5.032237e-49 | -8.615850e-47 |
| Msa1243490 | Msa1357790 | 0.804896 | 1.733134e-49 | -8.615850e-47 |
| Msa1267770 | Msa1357790 | 0.823108 | 1.653843e-53 | -8.615850e-47 |
| Msa1271270 | Msa1357790 | 0.811399 | 7.137597e-51 | -8.615850e-47 |
| Msa1285550 | Msa1357790 | 0.816133 | 6.470396e-52 | -8.615850e-47 |
| Msa1297230 | Msa1357790 | 0.811529 | 6.688414e-51 | -8.615850e-47 |
| Msa1343430 | Msa1357790 | 0.823353 | 1.449892e-53 | -8.615850e-47 |
| Msa0378720 | Msa1357790 | 0.831649 | 1.480923e-55 | -8.615850e-47 |
| Msa0406770 | Msa1357790 | 0.808457 | 3.068754e-50 | -8.615850e-47 |
| Msa0427100 | Msa1357790 | 0.802881 | 4.545247e-49 | -8.615850e-47 |
| Msa0427120 | Msa1357790 | 0.805158 | 1.527716e-49 | -8.615850e-47 |
| Msa0428370 | Msa1357790 | 0.814506 | 1.488199e-51 | -8.615850e-47 |
| Msa0428920 | Msa1357790 | 0.801588 | 8.387729e-49 | -8.615850e-47 |
| Msa0450400 | Msa1357790 | -0.806728 | 7.145383e-50 | -8.615850e-47 |
| Msa0464680 | Msa1357790 | 0.805165 | 1.523061e-49 | -8.615850e-47 |
| Msa0474730 | Msa1357790 | 0.809063 | 2.277318e-50 | -8.615850e-47 |
| Msa1009660 | Msa1357790 | 0.804578 | 2.019315e-49 | -8.615850e-47 |
| Msa1019430 | Msa1357790 | 0.804540 | 2.056944e-49 | -8.615850e-47 |
| Msa1019470 | Msa1357790 | 0.803622 | 3.192265e-49 | -8.615850e-47 |
| Msa1029070 | Msa1357790 | 0.810077 | 1.378819e-50 | -8.615850e-47 |
| Msa1043370 | Msa1357790 | 0.813069 | 3.085144e-51 | -8.615850e-47 |
| Msa1078170 | Msa1357790 | 0.804506 | 2.090542e-49 | -8.615850e-47 |
| Msa1087650 | Msa1357790 | 0.953238 | 4.255015e-111 | -8.615850e-47 |
| Msa1089450 | Msa1357790 | 0.820426 | 6.901673e-53 | -8.615850e-47 |
| Msa0239030 | Msa1357790 | 0.858519 | 7.790644e-63 | -8.615850e-47 |
| Msa0240900 | Msa1357790 | 0.831457 | 1.651675e-55 | -8.615850e-47 |
| Msa0244640 | Msa1357790 | 0.809163 | 2.166850e-50 | -8.615850e-47 |
| Msa0249860 | Msa1357790 | 0.810133 | 1.341392e-50 | -8.615850e-47 |
| Msa0265850 | Msa1357790 | 0.822308 | 2.538816e-53 | -8.615850e-47 |
| Msa0266180 | Msa1357790 | 0.831452 | 1.656011e-55 | -8.615850e-47 |
| Msa0276740 | Msa1357790 | 0.865241 | 6.812756e-65 | -8.615850e-47 |
| Msa0287740 | Msa1357790 | 0.825053 | 5.782215e-54 | -8.615850e-47 |
| Msa0298410 | Msa1357790 | 0.827894 | 1.215822e-54 | -8.615850e-47 |
| Msa0300270 | Msa1357790 | 0.823958 | 1.046398e-53 | -8.615850e-47 |
| Msa0300320 | Msa1357790 | 0.833392 | 5.475111e-56 | -8.615850e-47 |
| Msa0307670 | Msa1357790 | 0.806050 | 9.929554e-50 | -8.615850e-47 |
| Msa0316680 | Msa1357790 | 0.850688 | 1.444043e-60 | -8.615850e-47 |
| Msa0317970 | Msa1357790 | 0.811997 | 5.292367e-51 | -8.615850e-47 |
| Msa0321620 | Msa1357790 | 0.810728 | 9.979990e-51 | -8.615850e-47 |
| Msa0337700 | Msa1357790 | 0.823497 | 1.342150e-53 | -8.615850e-47 |
| Msa0339500 | Msa1357790 | 0.818297 | 2.109504e-52 | -8.615850e-47 |
| Msa0360210 | Msa1357790 | 0.812565 | 3.976911e-51 | -8.615850e-47 |
| Msa1123380 | Msa1357790 | 0.801433 | 9.026645e-49 | -8.615850e-47 |
| Msa1132840 | Msa1357790 | 0.807687 | 4.475569e-50 | -8.615850e-47 |
| Msa1144450 | Msa1357790 | 0.805696 | 1.178480e-49 | -8.615850e-47 |
| Msa1156160 | Msa1357790 | 0.806255 | 8.989679e-50 | -8.615850e-47 |
| Msa1186020 | Msa1357790 | 0.801949 | 7.071257e-49 | -8.615850e-47 |
| Msa1211230 | Msa1357790 | -0.800142 | 1.655939e-48 | -8.615850e-47 |
| Msa0530780 | Msa1357790 | 0.807527 | 4.839166e-50 | -8.615850e-47 |
| Msa0572840 | Msa1357790 | 0.805856 | 1.090466e-49 | -8.615850e-47 |
| Msa0580370 | Msa1357790 | 0.808776 | 2.623358e-50 | -8.615850e-47 |
| Msa0581470 | Msa1357790 | 0.821489 | 3.928861e-53 | -8.615850e-47 |
| Msa0597790 | Msa1357790 | 0.815010 | 1.151053e-51 | -8.615850e-47 |
| Msa0842680 | Msa1357790 | 0.819179 | 1.330452e-52 | -8.615850e-47 |
| Msa0861600 | Msa1357790 | 0.807564 | 4.752405e-50 | -8.615850e-47 |
| Msa0967380 | Msa1357790 | 0.856959 | 2.261249e-62 | -8.615850e-47 |
| Msa0967870 | Msa1357790 | 0.819119 | 1.372661e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357790 | MtrunA17_Chr1g0192791 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 544 |
| Msa1357790 | MtrunA17_Chr5g0413201 | 53.307 | 257 | 104 | 4 | 9 | 259 | 63 | 309 | 8.64e-84 | 253 |
| Msa1357790 | MtrunA17_Chr1g0151961 | 48.810 | 252 | 116 | 4 | 18 | 264 | 119 | 362 | 1.69e-70 | 221 |
| Msa1357790 | MtrunA17_Chr5g0439391 | 48.996 | 249 | 102 | 4 | 19 | 259 | 47 | 278 | 4.25e-68 | 213 |
| Msa1357790 | MtrunA17_Chr2g0289201 | 50.617 | 243 | 106 | 4 | 18 | 256 | 117 | 349 | 4.42e-66 | 210 |
| Msa1357790 | MtrunA17_Chr3g0137241 | 35.249 | 261 | 122 | 8 | 19 | 244 | 107 | 355 | 1.96e-37 | 135 |
| Msa1357790 | MtrunA17_Chr1g0149651 | 34.538 | 249 | 138 | 6 | 19 | 244 | 174 | 420 | 2.16e-37 | 136 |
| Msa1357790 | MtrunA17_Chr5g0398181 | 33.597 | 253 | 145 | 4 | 15 | 244 | 24 | 276 | 1.49e-36 | 131 |
| Msa1357790 | MtrunA17_Chr4g0065241 | 33.065 | 248 | 147 | 4 | 16 | 244 | 68 | 315 | 2.77e-36 | 131 |
| Msa1357790 | MtrunA17_Chr2g0305101 | 34.274 | 248 | 138 | 6 | 19 | 244 | 95 | 339 | 3.37e-35 | 129 |
| Msa1357790 | MtrunA17_Chr6g0479181 | 34.906 | 106 | 67 | 1 | 15 | 120 | 64 | 167 | 8.26e-13 | 65.5 |
| Msa1357790 | MtrunA17_Chr7g0240371 | 38.356 | 73 | 43 | 1 | 174 | 246 | 296 | 366 | 5.07e-11 | 62.4 |
| Msa1357790 | MtrunA17_Chr4g0008591 | 42.466 | 73 | 39 | 2 | 174 | 246 | 352 | 421 | 5.83e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357790 | AT1G23380.1 | 50.794 | 252 | 104 | 4 | 17 | 261 | 84 | 322 | 2.38e-82 | 250 |
| Msa1357790 | AT1G70510.1 | 50.201 | 249 | 110 | 3 | 17 | 261 | 68 | 306 | 9.23e-81 | 246 |
| Msa1357790 | AT1G23380.2 | 50.394 | 254 | 104 | 5 | 17 | 261 | 84 | 324 | 2.56e-80 | 245 |
| Msa1357790 | AT1G70510.2 | 49.407 | 253 | 110 | 4 | 17 | 261 | 68 | 310 | 2.47e-78 | 239 |
| Msa1357790 | AT1G62360.1 | 50.202 | 247 | 107 | 4 | 18 | 258 | 121 | 357 | 5.93e-68 | 215 |
| Msa1357790 | AT4G08150.1 | 47.581 | 248 | 116 | 5 | 18 | 258 | 134 | 374 | 1.11e-66 | 213 |
| Msa1357790 | AT1G62990.1 | 34.661 | 251 | 142 | 6 | 15 | 244 | 26 | 275 | 1.78e-39 | 139 |
| Msa1357790 | AT5G25220.2 | 35.200 | 250 | 132 | 6 | 19 | 244 | 160 | 403 | 2.50e-38 | 139 |
| Msa1357790 | AT5G25220.1 | 35.200 | 250 | 132 | 6 | 19 | 244 | 160 | 403 | 2.80e-38 | 139 |
| Msa1357790 | AT5G11060.1 | 35.156 | 256 | 124 | 8 | 19 | 244 | 124 | 367 | 1.90e-37 | 136 |
| Msa1357790 | AT4G32040.2 | 34.146 | 246 | 140 | 5 | 19 | 244 | 119 | 362 | 9.55e-37 | 134 |
| Msa1357790 | AT4G32040.1 | 34.146 | 246 | 140 | 5 | 19 | 244 | 119 | 362 | 1.14e-36 | 134 |
| Msa1357790 | AT1G75430.1 | 49.091 | 55 | 28 | 0 | 192 | 246 | 209 | 263 | 5.16e-11 | 62.4 |
| Msa1357790 | AT5G02030.1 | 46.667 | 60 | 32 | 0 | 187 | 246 | 350 | 409 | 8.75e-11 | 62.4 |
Find 98 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCTTCTTGAAGAAAT+AGG | 0.173162 | tig0016189:+12055 | Msa1357790:CDS |
| TCTCACGGAAAGCATTATTT+TGG | 0.227729 | tig0016189:-12090 | Msa1357790:intergenic |
| ATTTCTCAAGAAAAGGAAAA+AGG | 0.267954 | tig0016189:+17158 | Msa1357790:CDS |
| AGGGCATAGGCGTATTGTTC+TGG | 0.295882 | tig0016189:-18076 | Msa1357790:intergenic |
| ATGATGATTAGCCTTGGATT+TGG | 0.302616 | tig0016189:+18322 | Msa1357790:three_prime_UTR |
| CTTCTCTTCTTGAAGAAATA+GGG | 0.308161 | tig0016189:+12056 | Msa1357790:CDS |
| ACAACCAATCGGATCTAATA+AGG | 0.325364 | tig0016189:+11704 | Msa1357790:CDS |
| ATATAAAGCAGATAAATAAT+TGG | 0.326164 | tig0016189:+17831 | Msa1357790:CDS |
| ATCCATGACATTCAAGCAAA+TGG | 0.347216 | tig0016189:-18014 | Msa1357790:intergenic |
| TTTACAGTGGGTCATATTGA+TGG | 0.357534 | tig0016189:+11599 | Msa1357790:intron |
| TTTACCTGAACGGTTGTAAT+CGG | 0.376328 | tig0016189:-12438 | Msa1357790:intergenic |
| TGTTGCTTCATTGAAGGGCT+TGG | 0.378477 | tig0016189:-12351 | Msa1357790:intergenic |
| GTTTATTCTTATTCTGCTGC+TGG | 0.387145 | tig0016189:+11632 | Msa1357790:five_prime_UTR |
| AATAATGCTTTCCGTGAGAT+AGG | 0.392343 | tig0016189:+12094 | Msa1357790:CDS |
| GATAGTAGATTTGGATAAAG+AGG | 0.394577 | tig0016189:-11772 | Msa1357790:intergenic |
| TCCTGACCTTGACCACTTCA+TGG | 0.397547 | tig0016189:+12123 | Msa1357790:CDS |
| AAATAATGTTGCTTCATTGA+AGG | 0.405931 | tig0016189:-12357 | Msa1357790:intergenic |
| ATTTGTATTACCGTGGGATA+AGG | 0.406677 | tig0016189:-17243 | Msa1357790:intergenic |
| AAGTTTCTTGCTAGAGGTGC+AGG | 0.408023 | tig0016189:+18292 | Msa1357790:three_prime_UTR |
| TCCAAGAAAACCTGGGGAAA+AGG | 0.408702 | tig0016189:-11046 | Msa1357790:intergenic |
| TCTGCTGCTGGATTGCATCT+AGG | 0.408994 | tig0016189:+11644 | Msa1357790:five_prime_UTR |
| GACAGGAATTTCTCAAGAAA+AGG | 0.410633 | tig0016189:+17151 | Msa1357790:CDS |
| ATTATTAGTTATCTGTTTCG+TGG | 0.419970 | tig0016189:+18190 | Msa1357790:three_prime_UTR |
| GAAATGCTCCTTCGTAAGTA+CGG | 0.420426 | tig0016189:+17108 | Msa1357790:CDS |
| AATAATGTTGCTTCATTGAA+GGG | 0.423656 | tig0016189:-12356 | Msa1357790:intergenic |
| GGATGCAAGAAAAGCATTGA+TGG | 0.424199 | tig0016189:+17194 | Msa1357790:CDS |
| GAAAGGAAAGAGTGGAAAGC+TGG | 0.447406 | tig0016189:-11118 | Msa1357790:intergenic |
| GGAAAGGTTGAAGCAGTAGA+AGG | 0.448898 | tig0016189:+17033 | Msa1357790:CDS |
| ATTGGTGGAACGTCCACTAT+AGG | 0.452627 | tig0016189:+17217 | Msa1357790:CDS |
| TCATCCGATTACAACCGTTC+AGG | 0.455239 | tig0016189:+12434 | Msa1357790:CDS |
| GGGTTAGATCACGAGGCAGC+AGG | 0.462846 | tig0016189:+16985 | Msa1357790:intron |
| GCTGGGTTGGCTACAGCACC+TGG | 0.465293 | tig0016189:-11100 | Msa1357790:intergenic |
| CCTCTGTAAATTTATTCTGC+AGG | 0.471764 | tig0016189:+17944 | Msa1357790:exon |
| AAATGCTCCTTCGTAAGTAC+GGG | 0.472749 | tig0016189:+17109 | Msa1357790:CDS |
| TTACAGAGGTCCTGCTATGC+TGG | 0.477108 | tig0016189:-17930 | Msa1357790:intergenic |
| ACCATGAAGTGGTCAAGGTC+AGG | 0.484448 | tig0016189:-12124 | Msa1357790:intergenic |
| TGGGATAAGGCCACCTATAG+TGG | 0.485346 | tig0016189:-17230 | Msa1357790:intergenic |
| ACCCATTTGCTTGAATGTCA+TGG | 0.491491 | tig0016189:+18012 | Msa1357790:three_prime_UTR |
| CTTCTTTCGCAGATTAAGAC+AGG | 0.496624 | tig0016189:-17986 | Msa1357790:intergenic |
| ATTCCTGTCTTAAGTTGCTA+AGG | 0.503658 | tig0016189:-17137 | Msa1357790:intergenic |
| CAAGAAAAGCATTGATGGAT+TGG | 0.506407 | tig0016189:+17199 | Msa1357790:CDS |
| TCCATGACATTCAAGCAAAT+GGG | 0.507344 | tig0016189:-18013 | Msa1357790:intergenic |
| AAAGAGGGTGAGTTGCGATC+TGG | 0.510035 | tig0016189:-11756 | Msa1357790:intergenic |
| GTAAGTAGCACCAGCATAGC+AGG | 0.513299 | tig0016189:+17920 | Msa1357790:CDS |
| AGAAGTGGGAAAGGAAAGAG+TGG | 0.525785 | tig0016189:-11126 | Msa1357790:intergenic |
| ATATGATATTAGCTAGGCTT+CGG | 0.529086 | tig0016189:+18035 | Msa1357790:three_prime_UTR |
| TCTAATAAGGTTGGATATGA+CGG | 0.529171 | tig0016189:+11717 | Msa1357790:CDS |
| AAAGGAAAGAGTGGAAAGCT+GGG | 0.540723 | tig0016189:-11117 | Msa1357790:intergenic |
| AGAAGAGAAGCAAGTTCTGT+TGG | 0.544757 | tig0016189:-12043 | Msa1357790:intergenic |
| GAAGAAACAAACATAAGAAG+TGG | 0.546211 | tig0016189:-11141 | Msa1357790:intergenic |
| ATAGTAGATTTGGATAAAGA+GGG | 0.546531 | tig0016189:-11771 | Msa1357790:intergenic |
| CCAATCGGATCTAATAAGGT+TGG | 0.547810 | tig0016189:+11708 | Msa1357790:CDS |
| TCTTTAAGCTCTTTATCACC+TGG | 0.551142 | tig0016189:-17087 | Msa1357790:intergenic |
| ATAGGCGTATTGTTCTGGAT+TGG | 0.551760 | tig0016189:-18071 | Msa1357790:intergenic |
| CCAACCTTATTAGATCCGAT+TGG | 0.554336 | tig0016189:-11708 | Msa1357790:intergenic |
| GAAAAGCATTGATGGATTGG+TGG | 0.555034 | tig0016189:+17202 | Msa1357790:CDS |
| TTACCTTAGCAACTTAAGAC+AGG | 0.555596 | tig0016189:+17134 | Msa1357790:CDS |
| GAAAGAGTGGAAAGCTGGGT+TGG | 0.556200 | tig0016189:-11113 | Msa1357790:intergenic |
| AATTTGAAGTTTCTTGCTAG+AGG | 0.556900 | tig0016189:+18286 | Msa1357790:three_prime_UTR |
| ACAACTAAACGAACTTTGCA+AGG | 0.560050 | tig0016189:+12397 | Msa1357790:CDS |
| GAAAATCTCATATCTTCAGA+TGG | 0.560173 | tig0016189:-17884 | Msa1357790:intergenic |
| AGTGGGTCATATTGATGGCA+AGG | 0.560418 | tig0016189:+11604 | Msa1357790:intron |
| TCACATGGAACACAACCAAT+CGG | 0.562048 | tig0016189:+11693 | Msa1357790:exon |
| CTGCAGCTGTCAGATATGAC+TGG | 0.564508 | tig0016189:+17803 | Msa1357790:CDS |
| TTAAGTTCTCTTTACCTGAA+CGG | 0.565840 | tig0016189:-12448 | Msa1357790:intergenic |
| TCAGAGGATGAAATGAGTTG+TGG | 0.568316 | tig0016189:+17012 | Msa1357790:CDS |
| CTGTAAATTTATTCTGCAGG+TGG | 0.571978 | tig0016189:+17947 | Msa1357790:exon |
| ACCTGGGGAAAAGGAAAGAG+AGG | 0.574069 | tig0016189:-11037 | Msa1357790:intergenic |
| AATATACCATGAAGTGGTCA+AGG | 0.574865 | tig0016189:-12129 | Msa1357790:intergenic |
| TAAAAGAATATACCATGAAG+TGG | 0.580028 | tig0016189:-12135 | Msa1357790:intergenic |
| ACAGACCTACTCAGTGACAT+AGG | 0.581393 | tig0016189:-18121 | Msa1357790:intergenic |
| TCAATCAGAGGAAAAGACAC+TGG | 0.584588 | tig0016189:+17858 | Msa1357790:CDS |
| AAGAATACTCTCCAAATCCA+AGG | 0.590642 | tig0016189:-18333 | Msa1357790:intergenic |
| AAGAAACAAACATAAGAAGT+GGG | 0.593665 | tig0016189:-11140 | Msa1357790:intergenic |
| ACAAACATAAGAAGTGGGAA+AGG | 0.594386 | tig0016189:-11135 | Msa1357790:intergenic |
| CAGGATCATCTCCTATCTCA+CGG | 0.597806 | tig0016189:-12105 | Msa1357790:intergenic |
| TCATGGATATGATATTAGCT+AGG | 0.597845 | tig0016189:+18029 | Msa1357790:three_prime_UTR |
| CTACTCAGTGACATAGGTGC+CGG | 0.599631 | tig0016189:-18115 | Msa1357790:intergenic |
| CTTTGTGGCACATCATGTCC+AGG | 0.602003 | tig0016189:+17069 | Msa1357790:CDS |
| ATTGGTTGTGTTCCATGTGA+AGG | 0.604142 | tig0016189:-11690 | Msa1357790:intergenic |
| GGTGGTCATGATGAACTTTG+TGG | 0.607949 | tig0016189:+17054 | Msa1357790:CDS |
| GGTTAGATCACGAGGCAGCA+GGG | 0.610469 | tig0016189:+16986 | Msa1357790:intron |
| CTATAGGTGGCCTTATCCCA+CGG | 0.616947 | tig0016189:+17233 | Msa1357790:CDS |
| CAACTAAACGAACTTTGCAA+GGG | 0.626350 | tig0016189:+12398 | Msa1357790:CDS |
| AACTAAACGAACTTTGCAAG+GGG | 0.629556 | tig0016189:+12399 | Msa1357790:CDS |
| ATAATTGGTTCATCAATCAG+AGG | 0.632866 | tig0016189:+17846 | Msa1357790:CDS |
| CGGCACCTATGTCACTGAGT+AGG | 0.637662 | tig0016189:+18116 | Msa1357790:three_prime_UTR |
| CGAGGCAGCAGGGACATCAG+AGG | 0.640139 | tig0016189:+16996 | Msa1357790:CDS |
| AGTTCTTCATAGATACAAAG+AGG | 0.649236 | tig0016189:+12322 | Msa1357790:CDS |
| GGTGGAACGTCCACTATAGG+TGG | 0.655633 | tig0016189:+17220 | Msa1357790:CDS |
| TAATAATAACTACCTTCACA+TGG | 0.656128 | tig0016189:+11678 | Msa1357790:exon |
| GCTGCTGGATTGCATCTAGG+AGG | 0.656462 | tig0016189:+11647 | Msa1357790:five_prime_UTR |
| GGATGAAATGAGTTGTGGAA+AGG | 0.661174 | tig0016189:+17017 | Msa1357790:CDS |
| AAGGTTGAAGCAGTAGAAGG+TGG | 0.681013 | tig0016189:+17036 | Msa1357790:CDS |
| AGACACACACTCTCACAACA+AGG | 0.683479 | tig0016189:-11013 | Msa1357790:intergenic |
| AATGCTCCTTCGTAAGTACG+GGG | 0.701629 | tig0016189:+17110 | Msa1357790:CDS |
| CCTGCAGAATAAATTTACAG+AGG | 0.707916 | tig0016189:-17944 | Msa1357790:intergenic |
| ATGCTCCTTCGTAAGTACGG+GGG | 0.733963 | tig0016189:+17111 | Msa1357790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAATTTATATATTAA+AGG | - | tig0016189:13570-13589 | Msa1357790:intergenic | 0.0% |
| !! | TTAATATATAAATTATATAT+AGG | + | tig0016189:13570-13589 | Msa1357790:intron | 0.0% |
| !! | TTTATAATATTATACGAATA+TGG | + | tig0016189:11216-11235 | Msa1357790:intron | 10.0% |
| !! | AACATATTATATCATATATA+TGG | - | tig0016189:11334-11353 | Msa1357790:intergenic | 10.0% |
| !! | AAATATATATGATGAATTAA+AGG | - | tig0016189:11840-11859 | Msa1357790:intergenic | 10.0% |
| !! | AAAAAAATATAGTAGAAAAT+TGG | - | tig0016189:12182-12201 | Msa1357790:intergenic | 10.0% |
| !!! | ATAGGTAAATTATAAAATTT+TGG | + | tig0016189:13588-13607 | Msa1357790:intron | 10.0% |
| !!! | TTTTTTTTAAAAAAAAAAGC+CGG | - | tig0016189:14247-14266 | Msa1357790:intergenic | 10.0% |
| !! | TATAAAATGAATTTGAATTT+CGG | + | tig0016189:14351-14370 | Msa1357790:intron | 10.0% |
| !! | CTATACATTAAATAAAAATT+TGG | + | tig0016189:15014-15033 | Msa1357790:intron | 10.0% |
| !!! | AATTTTAATAACTACATTTT+TGG | - | tig0016189:15212-15231 | Msa1357790:intergenic | 10.0% |
| !! | TAGTTATTAAAATTTATTTG+AGG | + | tig0016189:15218-15237 | Msa1357790:intron | 10.0% |
| !!! | AATATTTTTTTTTTGTACAA+TGG | - | tig0016189:15594-15613 | Msa1357790:intergenic | 10.0% |
| !! | TATTAAAAAAAATTATGTTG+TGG | + | tig0016189:16903-16922 | Msa1357790:intron | 10.0% |
| !! | ATATTATATCATATATATGG+TGG | - | tig0016189:11331-11350 | Msa1357790:intergenic | 15.0% |
| !!! | TATAGTTTTATACGTATAAT+TGG | + | tig0016189:11471-11490 | Msa1357790:intron | 15.0% |
| !!! | ATATAGAATAAAAAACCTTT+TGG | - | tig0016189:11813-11832 | Msa1357790:intergenic | 15.0% |
| !! | ATTACATTAATTAAATCAGA+TGG | + | tig0016189:12202-12221 | Msa1357790:intron | 15.0% |
| !!! | AACATTTAATTTATTACACT+TGG | + | tig0016189:12278-12297 | Msa1357790:intron | 15.0% |
| !! | AAAAATATCCAGATATTTAA+AGG | - | tig0016189:12489-12508 | Msa1357790:intergenic | 15.0% |
| !! | ATAAAAAGTGACAATTAAAA+AGG | - | tig0016189:12713-12732 | Msa1357790:intergenic | 15.0% |
| !! | AATGAGATGTTAAATTAATA+AGG | - | tig0016189:12810-12829 | Msa1357790:intergenic | 15.0% |
| !! | TAAATAACAAAGGATAATAT+TGG | + | tig0016189:12852-12871 | Msa1357790:intron | 15.0% |
| !! | AAATTAACAAAAAATACACA+AGG | + | tig0016189:13121-13140 | Msa1357790:intron | 15.0% |
| !! | AACATAAATATAAATCGTTT+AGG | + | tig0016189:13699-13718 | Msa1357790:intron | 15.0% |
| !! | ATTAAAATCCATATTATTGT+CGG | - | tig0016189:14326-14345 | Msa1357790:intergenic | 15.0% |
| !!! | TTTAAATGTTCTTTTTGTAT+AGG | - | tig0016189:14875-14894 | Msa1357790:intergenic | 15.0% |
| !! | TTCATGTCAATATATTAAAA+TGG | - | tig0016189:16692-16711 | Msa1357790:intergenic | 15.0% |
| !! | TTGATTATATATCTGTTAAA+AGG | + | tig0016189:17542-17561 | Msa1357790:intron | 15.0% |
| !!! | TATAATTTGATGAATTTTTC+AGG | + | tig0016189:17769-17788 | Msa1357790:intron | 15.0% |
| !! | ATATAAAGCAGATAAATAAT+TGG | + | tig0016189:17831-17850 | Msa1357790:CDS | 15.0% |
| !! | TATATATGATGAATTAAAGG+AGG | - | tig0016189:11837-11856 | Msa1357790:intergenic | 20.0% |
| !!! | ATATTTTTCACTCAATCATA+TGG | + | tig0016189:11854-11873 | Msa1357790:intron | 20.0% |
| !! | ATTAATTAAATCAGATGGAA+TGG | + | tig0016189:12207-12226 | Msa1357790:intron | 20.0% |
| !! | TATTATCGTACATAATTAGA+GGG | - | tig0016189:12625-12644 | Msa1357790:intergenic | 20.0% |
| !! | TTATTATCGTACATAATTAG+AGG | - | tig0016189:12626-12645 | Msa1357790:intergenic | 20.0% |
| !! | CTAATTATGTACGATAATAA+TGG | + | tig0016189:12626-12645 | Msa1357790:intron | 20.0% |
| !!! | TTATCCTTTGTTATTTATTG+CGG | - | tig0016189:12849-12868 | Msa1357790:intergenic | 20.0% |
| !! | ATAAAGCCAAAAAACATTTA+GGG | - | tig0016189:13909-13928 | Msa1357790:intergenic | 20.0% |
| !!! | TTTTTTGGCTTTATGTTATT+TGG | + | tig0016189:13915-13934 | Msa1357790:intron | 20.0% |
| !!! | TGTTATTTGGATTATTTGTA+AGG | + | tig0016189:13928-13947 | Msa1357790:intron | 20.0% |
| !!! | TTTCTTTGTCAAACTTTTTT+CGG | + | tig0016189:14169-14188 | Msa1357790:intron | 20.0% |
| !!! | GTTAAACAAATTTTTGCTAT+GGG | - | tig0016189:14382-14401 | Msa1357790:intergenic | 20.0% |
| !!! | TGTTAAACAAATTTTTGCTA+TGG | - | tig0016189:14383-14402 | Msa1357790:intergenic | 20.0% |
| !! | ATATTTGCATTCATCTAATA+TGG | + | tig0016189:14468-14487 | Msa1357790:intron | 20.0% |
| !!! | TGTTTTTCAATGAAGATTAT+TGG | + | tig0016189:14513-14532 | Msa1357790:intron | 20.0% |
| !!! | AAATTCAAGTTTAGTTTAGT+TGG | + | tig0016189:14820-14839 | Msa1357790:intron | 20.0% |
| !!! | AATTCAAGTTTAGTTTAGTT+GGG | + | tig0016189:14821-14840 | Msa1357790:intron | 20.0% |
| !! | TCCAATATAAAAACTTAACT+TGG | + | tig0016189:15103-15122 | Msa1357790:intron | 20.0% |
| !!! | AAATTTATTTGAGGTTTGAT+AGG | + | tig0016189:15227-15246 | Msa1357790:intron | 20.0% |
| !!! | AATTTATTTGAGGTTTGATA+GGG | + | tig0016189:15228-15247 | Msa1357790:intron | 20.0% |
| !!! | GGTTTTAATATCAAATTGAT+TGG | + | tig0016189:15332-15351 | Msa1357790:intron | 20.0% |
| !!! | ACGCGAAAATTTTAAAATTT+AGG | - | tig0016189:16201-16220 | Msa1357790:intergenic | 20.0% |
| !! | ATTGAATTTCTATAAAACAG+TGG | + | tig0016189:16410-16429 | Msa1357790:intron | 20.0% |
| !! | TCTCACTAATAATAAAATGT+TGG | + | tig0016189:16657-16676 | Msa1357790:intron | 20.0% |
| !! | ACTAATAATAAAATGTTGGA+GGG | + | tig0016189:16661-16680 | Msa1357790:intron | 20.0% |
| !!! | TTGTACTAATTAAGTTGATA+TGG | + | tig0016189:16852-16871 | Msa1357790:intron | 20.0% |
| !!! | ATTTCATTTTGTCCTTTTTT+TGG | + | tig0016189:16964-16983 | Msa1357790:intron | 20.0% |
| !!! | TTTCATTTTGTCCTTTTTTT+GGG | + | tig0016189:16965-16984 | Msa1357790:intron | 20.0% |
| !! | TCATCAAATTATAATCTATC+AGG | - | tig0016189:17762-17781 | Msa1357790:intergenic | 20.0% |
| !!! | AGATATGAGATTTTCTATTA+TGG | + | tig0016189:17892-17911 | Msa1357790:CDS | 20.0% |
| ! | GGAAAAGAAAAGCAAAAATA+AGG | + | tig0016189:11066-11085 | Msa1357790:five_prime_UTR | 25.0% |
| ! | AAGAAACAAACATAAGAAGT+GGG | - | tig0016189:11143-11162 | Msa1357790:intergenic | 25.0% |
| ! | GTATAAAACTATAGTACTAC+TGG | - | tig0016189:11464-11483 | Msa1357790:intergenic | 25.0% |
| ! | TAATAATAACTACCTTCACA+TGG | + | tig0016189:11678-11697 | Msa1357790:exon | 25.0% |
| ! | ATAGTAGATTTGGATAAAGA+GGG | - | tig0016189:11774-11793 | Msa1357790:intergenic | 25.0% |
| ! | AAAAAAGCAGATAGTAGATT+TGG | - | tig0016189:11784-11803 | Msa1357790:intergenic | 25.0% |
| ! | ATACTATATATTGTGCATGA+AGG | + | tig0016189:12012-12031 | Msa1357790:intron | 25.0% |
| ! | TAAAAGAATATACCATGAAG+TGG | - | tig0016189:12138-12157 | Msa1357790:intergenic | 25.0% |
| ! | ATATAGTAGAAAATTGGACT+TGG | - | tig0016189:12176-12195 | Msa1357790:intergenic | 25.0% |
| !! | ATTTATTACACTTGGTGATT+AGG | + | tig0016189:12286-12305 | Msa1357790:intron | 25.0% |
| !! | AATAATGTTGCTTCATTGAA+GGG | - | tig0016189:12359-12378 | Msa1357790:intergenic | 25.0% |
| !! | AAATAATGTTGCTTCATTGA+AGG | - | tig0016189:12360-12379 | Msa1357790:intergenic | 25.0% |
| ! | TCATAATGCCTTTAAATATC+TGG | + | tig0016189:12478-12497 | Msa1357790:intron | 25.0% |
| ! | TCGTGTTACAAAAAAGAAAA+GGG | - | tig0016189:12598-12617 | Msa1357790:intergenic | 25.0% |
| ! | TTCGTGTTACAAAAAAGAAA+AGG | - | tig0016189:12599-12618 | Msa1357790:intergenic | 25.0% |
| !!! | TTTCTTTTTTGTAACACGAA+TGG | + | tig0016189:12599-12618 | Msa1357790:intron | 25.0% |
| ! | AAGTGACAATTAAAAAGGAA+CGG | - | tig0016189:12708-12727 | Msa1357790:intergenic | 25.0% |
| ! | TTTGAAAGTGACAGTTAAAT+AGG | + | tig0016189:12903-12922 | Msa1357790:intron | 25.0% |
| !! | GTTTTACACAATAACATACA+TGG | + | tig0016189:13306-13325 | Msa1357790:intron | 25.0% |
| ! | ATTAATTACATCCACAAATG+AGG | + | tig0016189:13382-13401 | Msa1357790:intron | 25.0% |
| !!! | TTAGGGATTTTTTTTGCATA+AGG | + | tig0016189:13874-13893 | Msa1357790:intron | 25.0% |
| ! | CATAAAGCCAAAAAACATTT+AGG | - | tig0016189:13910-13929 | Msa1357790:intergenic | 25.0% |
| ! | TTTAATATATCGTTTCCTTC+CGG | + | tig0016189:14225-14244 | Msa1357790:intron | 25.0% |
| !!! | TTTTAAAAAAAAAAGCCGGA+AGG | - | tig0016189:14243-14262 | Msa1357790:intergenic | 25.0% |
| ! | AGATGAATGCAAATATACAA+TGG | - | tig0016189:14464-14483 | Msa1357790:intergenic | 25.0% |
| !!! | CAGTATTTTTGTGAAAATTC+GGG | - | tig0016189:14677-14696 | Msa1357790:intergenic | 25.0% |
| !!! | GCAGTATTTTTGTGAAAATT+CGG | - | tig0016189:14678-14697 | Msa1357790:intergenic | 25.0% |
| ! | TTACCAAAGAAATTGAATGT+GGG | - | tig0016189:14802-14821 | Msa1357790:intergenic | 25.0% |
| ! | TTTACCAAAGAAATTGAATG+TGG | - | tig0016189:14803-14822 | Msa1357790:intergenic | 25.0% |
| !! | GCCAAGTTAAGTTTTTATAT+TGG | - | tig0016189:15107-15126 | Msa1357790:intergenic | 25.0% |
| ! | TGATCAAATCACAAAACTAA+AGG | + | tig0016189:15356-15375 | Msa1357790:intron | 25.0% |
| ! | GATCAAATCACAAAACTAAA+GGG | + | tig0016189:15357-15376 | Msa1357790:intron | 25.0% |
| ! | TATGGTCTACAATTAAAACT+TGG | - | tig0016189:15502-15521 | Msa1357790:intergenic | 25.0% |
| !!! | TTTTTTTTGTACAATGGAGA+CGG | - | tig0016189:15588-15607 | Msa1357790:intergenic | 25.0% |
| !! | ATTTTTGTATATCATCACAG+TGG | + | tig0016189:15611-15630 | Msa1357790:intron | 25.0% |
| ! | ATTTAATTCAGATACTTCGT+GGG | - | tig0016189:15892-15911 | Msa1357790:intergenic | 25.0% |
| ! | TATTTAATTCAGATACTTCG+TGG | - | tig0016189:15893-15912 | Msa1357790:intergenic | 25.0% |
| !! | GAAGTATCTTATAAGTATCT+TGG | - | tig0016189:15971-15990 | Msa1357790:intergenic | 25.0% |
| ! | ACATATCCTAGAAAAAATGA+AGG | + | tig0016189:15997-16016 | Msa1357790:intron | 25.0% |
| ! | CATATCCTAGAAAAAATGAA+GGG | + | tig0016189:15998-16017 | Msa1357790:intron | 25.0% |
| !!! | TTTTACCCTTCATTTTTTCT+AGG | - | tig0016189:16006-16025 | Msa1357790:intergenic | 25.0% |
| !! | TAATCAATGCTTATTTCTTC+AGG | + | tig0016189:16112-16131 | Msa1357790:intron | 25.0% |
| ! | ACAACACATAAAATTTACCT+TGG | - | tig0016189:16531-16550 | Msa1357790:intergenic | 25.0% |
| ! | GTACGTGAAATAAAATGATT+GGG | - | tig0016189:16600-16619 | Msa1357790:intergenic | 25.0% |
| ! | AAGTTAATTGTTGGAATTGT+TGG | + | tig0016189:16630-16649 | Msa1357790:intron | 25.0% |
| ! | CACTAATAATAAAATGTTGG+AGG | + | tig0016189:16660-16679 | Msa1357790:intron | 25.0% |
| ! | CTAATAATAAAATGTTGGAG+GGG | + | tig0016189:16662-16681 | Msa1357790:intron | 25.0% |
| ! | TAATAATAAAATGTTGGAGG+GGG | + | tig0016189:16663-16682 | Msa1357790:intron | 25.0% |
| !! | ATTGAAGCTATAGAAAGTAT+AGG | + | tig0016189:16714-16733 | Msa1357790:intron | 25.0% |
| !! | TTGAAGCTATAGAAAGTATA+GGG | + | tig0016189:16715-16734 | Msa1357790:intron | 25.0% |
| ! | ATTTCTCAAGAAAAGGAAAA+AGG | + | tig0016189:17158-17177 | Msa1357790:CDS | 25.0% |
| ! | TTTCTCAAGAAAAGGAAAAA+GGG | + | tig0016189:17159-17178 | Msa1357790:CDS | 25.0% |
| !! | TGTTTGTACTAGAAAACTTT+TGG | + | tig0016189:17597-17616 | Msa1357790:intron | 25.0% |
| !!! | AATTTGATGAATTTTTCAGG+AGG | + | tig0016189:17772-17791 | Msa1357790:intron | 25.0% |
| !! | TATGAGATTTTCTATTATGG+AGG | + | tig0016189:17895-17914 | Msa1357790:CDS | 25.0% |
| !! | ATGAGATTTTCTATTATGGA+GGG | + | tig0016189:17896-17915 | Msa1357790:CDS | 25.0% |
| ! | ATTATTAGTTATCTGTTTCG+TGG | + | tig0016189:18190-18209 | Msa1357790:three_prime_UTR | 25.0% |
| ! | TTTCTTTTCCAAGAAAACCT+GGG | - | tig0016189:11056-11075 | Msa1357790:intergenic | 30.0% |
| ! | TTTTCTTTTCCAAGAAAACC+TGG | - | tig0016189:11057-11076 | Msa1357790:intergenic | 30.0% |
| AGAAAAGCAAAAATAAGGTC+TGG | + | tig0016189:11071-11090 | Msa1357790:five_prime_UTR | 30.0% | |
| GAAGAAACAAACATAAGAAG+TGG | - | tig0016189:11144-11163 | Msa1357790:intergenic | 30.0% | |
| ! | TATGGATTATATTCTCCACT+AGG | + | tig0016189:11234-11253 | Msa1357790:intron | 30.0% |
| !!! | AGGTTTTTTATTTCACCTAG+TGG | - | tig0016189:11252-11271 | Msa1357790:intergenic | 30.0% |
| GGTGAAATAAAAAACCTACA+CGG | + | tig0016189:11255-11274 | Msa1357790:intron | 30.0% | |
| GTGAAATAAAAAACCTACAC+GGG | + | tig0016189:11256-11275 | Msa1357790:intron | 30.0% | |
| CAAGTGAGTTTAGATATACA+TGG | + | tig0016189:11548-11567 | Msa1357790:intron | 30.0% | |
| TCTAATAAGGTTGGATATGA+CGG | + | tig0016189:11717-11736 | Msa1357790:CDS | 30.0% | |
| GATAGTAGATTTGGATAAAG+AGG | - | tig0016189:11775-11794 | Msa1357790:intergenic | 30.0% | |
| !!! | TGCTTTTTTAGAATGCCAAA+AGG | + | tig0016189:11795-11814 | Msa1357790:CDS | 30.0% |
| TATATATTGTGCATGAAGGT+TGG | + | tig0016189:12016-12035 | Msa1357790:intron | 30.0% | |
| ATATATTGTGCATGAAGGTT+GGG | + | tig0016189:12017-12036 | Msa1357790:intron | 30.0% | |
| CTTCTCTTCTTGAAGAAATA+GGG | + | tig0016189:12056-12075 | Msa1357790:CDS | 30.0% | |
| AGTTCTTCATAGATACAAAG+AGG | + | tig0016189:12322-12341 | Msa1357790:CDS | 30.0% | |
| TTAAGTTCTCTTTACCTGAA+CGG | - | tig0016189:12451-12470 | Msa1357790:intergenic | 30.0% | |
| TCAGGTAAAGAGAACTTAAT+TGG | + | tig0016189:12452-12471 | Msa1357790:intron | 30.0% | |
| ! | GAAGCAATTATTGATTGTCT+TGG | - | tig0016189:12749-12768 | Msa1357790:intergenic | 30.0% |
| TCCAAAAGAGACACTTAAAA+AGG | + | tig0016189:12939-12958 | Msa1357790:intron | 30.0% | |
| !!! | TCCTTTTTAAGTGTCTCTTT+TGG | - | tig0016189:12943-12962 | Msa1357790:intergenic | 30.0% |
| AAGAGACACTTAAAAAGGAA+CGG | + | tig0016189:12944-12963 | Msa1357790:intron | 30.0% | |
| AGTAGCAAATCTTTACATTG+AGG | + | tig0016189:12984-13003 | Msa1357790:intron | 30.0% | |
| ! | ATCTATACTCGTGTTCTTTT+TGG | - | tig0016189:13193-13212 | Msa1357790:intergenic | 30.0% |
| CTGCAGTTAGAATAATGATA+TGG | + | tig0016189:13407-13426 | Msa1357790:intron | 30.0% | |
| ! | TACTTGCTGACAAAGTTATA+GGG | - | tig0016189:13517-13536 | Msa1357790:intergenic | 30.0% |
| ! | ATACTTGCTGACAAAGTTAT+AGG | - | tig0016189:13518-13537 | Msa1357790:intergenic | 30.0% |
| !!! | GTGCCTAAATGATTTTGATT+TGG | + | tig0016189:13815-13834 | Msa1357790:intron | 30.0% |
| ACGCCAAATCAAAATCATTT+AGG | - | tig0016189:13821-13840 | Msa1357790:intergenic | 30.0% | |
| ! | TTTCTCACTAGTACTAGTTT+AGG | + | tig0016189:13856-13875 | Msa1357790:intron | 30.0% |
| ! | TTCTCACTAGTACTAGTTTA+GGG | + | tig0016189:13857-13876 | Msa1357790:intron | 30.0% |
| !!! | AAAGCTCCCTAAATGTTTTT+TGG | + | tig0016189:13900-13919 | Msa1357790:intron | 30.0% |
| TAAAACTTCAGTTCTATTGG+TGG | + | tig0016189:14010-14029 | Msa1357790:intron | 30.0% | |
| TCGACTTTGACTATCAATTA+TGG | + | tig0016189:14061-14080 | Msa1357790:intron | 30.0% | |
| ACTTTGACTATCAATTATGG+AGG | + | tig0016189:14064-14083 | Msa1357790:intron | 30.0% | |
| AACTGTCGTAAACAGAAAAT+AGG | - | tig0016189:14096-14115 | Msa1357790:intergenic | 30.0% | |
| ! | TTTGTTGTCCGACAATAATA+TGG | + | tig0016189:14315-14334 | Msa1357790:intron | 30.0% |
| ! | ACAATGGTACTCATAGATTT+TGG | - | tig0016189:14448-14467 | Msa1357790:intergenic | 30.0% |
| ACACACTAATATATAGGCAA+CGG | + | tig0016189:14613-14632 | Msa1357790:intron | 30.0% | |
| !! | TTTTTGTGAAAATTCGGGTT+GGG | - | tig0016189:14672-14691 | Msa1357790:intergenic | 30.0% |
| ! | ATTTTTGTGAAAATTCGGGT+TGG | - | tig0016189:14673-14692 | Msa1357790:intergenic | 30.0% |
| ! | AGTTTAGTTTAGTTGGGTTT+CGG | + | tig0016189:14827-14846 | Msa1357790:intron | 30.0% |
| ! | GTATAGGTTTGCTTTGAATT+TGG | - | tig0016189:14859-14878 | Msa1357790:intergenic | 30.0% |
| AATGTATAGCTCTTCAATGA+AGG | - | tig0016189:15003-15022 | Msa1357790:intergenic | 30.0% | |
| TTGACTCATTCTTACATGAA+CGG | - | tig0016189:15082-15101 | Msa1357790:intergenic | 30.0% | |
| CAATCCAATCTCAAATACAT+GGG | + | tig0016189:15305-15324 | Msa1357790:intron | 30.0% | |
| ! | AATTCCCATGTATTTGAGAT+TGG | - | tig0016189:15312-15331 | Msa1357790:intergenic | 30.0% |
| AATCTCAAATACATGGGAAT+TGG | + | tig0016189:15311-15330 | Msa1357790:intron | 30.0% | |
| ! | TTTACATGTGAGTTTTCCAA+TGG | + | tig0016189:15724-15743 | Msa1357790:intron | 30.0% |
| !! | TGAAGTATTGGTATCTGATA+CGG | - | tig0016189:15805-15824 | Msa1357790:intergenic | 30.0% |
| TATCAGATACCAATACTTCA+CGG | + | tig0016189:15805-15824 | Msa1357790:intron | 30.0% | |
| ! | TAAGTATCTTGGTGTATATG+TGG | - | tig0016189:15960-15979 | Msa1357790:intergenic | 30.0% |
| GACAATGATGTGAAATTCAA+TGG | + | tig0016189:16032-16051 | Msa1357790:intron | 30.0% | |
| TTCTATAAAACAGTGGTTTC+TGG | + | tig0016189:16417-16436 | Msa1357790:intron | 30.0% | |
| ! | GTAATGAAATGGGAATGTTT+TGG | + | tig0016189:16453-16472 | Msa1357790:intron | 30.0% |
| CTATTATATAGTTGCATGCA+TGG | + | tig0016189:16476-16495 | Msa1357790:intron | 30.0% | |
| GGAATATACTTGAAATTCCA+AGG | + | tig0016189:16511-16530 | Msa1357790:intron | 30.0% | |
| CGTACGTGAAATAAAATGAT+TGG | - | tig0016189:16601-16620 | Msa1357790:intergenic | 30.0% | |
| TGAAAGCGAAAGTTAATTGT+TGG | + | tig0016189:16621-16640 | Msa1357790:intron | 30.0% | |
| AATAATAAAATGTTGGAGGG+GGG | + | tig0016189:16664-16683 | Msa1357790:intron | 30.0% | |
| CTCATTCGGCATATAATAAT+TGG | + | tig0016189:16742-16761 | Msa1357790:intron | 30.0% | |
| ! | TTTTGTTGAATGTGTGTACA+TGG | - | tig0016189:16817-16836 | Msa1357790:intergenic | 30.0% |
| ATTGGAATTTGTATTACCGT+GGG | - | tig0016189:17252-17271 | Msa1357790:intergenic | 30.0% | |
| AATTGGAATTTGTATTACCG+TGG | - | tig0016189:17253-17272 | Msa1357790:intergenic | 30.0% | |
| GCATGTTGTGTGATATTAAT+TGG | - | tig0016189:17270-17289 | Msa1357790:intergenic | 30.0% | |
| ! | ATCCTGACTGGAATAATTTT+TGG | + | tig0016189:17399-17418 | Msa1357790:intron | 30.0% |
| ! | ATAATTGGTTCATCAATCAG+AGG | + | tig0016189:17846-17865 | Msa1357790:CDS | 30.0% |
| GAAAATCTCATATCTTCAGA+TGG | - | tig0016189:17887-17906 | Msa1357790:intergenic | 30.0% | |
| TCATGGATATGATATTAGCT+AGG | + | tig0016189:18029-18048 | Msa1357790:three_prime_UTR | 30.0% | |
| ATATGATATTAGCTAGGCTT+CGG | + | tig0016189:18035-18054 | Msa1357790:three_prime_UTR | 30.0% | |
| GAAAAATTAACATAGGGCAT+AGG | - | tig0016189:18092-18111 | Msa1357790:intergenic | 30.0% | |
| CGGTTCGAAAAATTAACATA+GGG | - | tig0016189:18098-18117 | Msa1357790:intergenic | 30.0% | |
| !! | CCTATGTTAATTTTTCGAAC+CGG | + | tig0016189:18096-18115 | Msa1357790:three_prime_UTR | 30.0% |
| ! | AATTTGAAGTTTCTTGCTAG+AGG | + | tig0016189:18286-18305 | Msa1357790:three_prime_UTR | 30.0% |
| !!! | TTTTAGATGATGATTAGCCT+TGG | + | tig0016189:18316-18335 | Msa1357790:three_prime_UTR | 30.0% |
| ! | TTCTTTTCCAAGAAAACCTG+GGG | - | tig0016189:11055-11074 | Msa1357790:intergenic | 35.0% |
| ACAAACATAAGAAGTGGGAA+AGG | - | tig0016189:11138-11157 | Msa1357790:intergenic | 35.0% | |
| CAGTCAAACAAAAGGAGATT+AGG | - | tig0016189:11437-11456 | Msa1357790:intergenic | 35.0% | |
| TTGACTCAATGTTAACTGAC+AGG | - | tig0016189:11531-11550 | Msa1357790:intergenic | 35.0% | |
| GTAAAAGGACATTCAACTTG+TGG | - | tig0016189:11584-11603 | Msa1357790:intergenic | 35.0% | |
| ! | AGTTGAATGTCCTTTTACAG+TGG | + | tig0016189:11586-11605 | Msa1357790:intron | 35.0% |
| ! | GTTGAATGTCCTTTTACAGT+GGG | + | tig0016189:11587-11606 | Msa1357790:intron | 35.0% |
| TCAATATGACCCACTGTAAA+AGG | - | tig0016189:11599-11618 | Msa1357790:intergenic | 35.0% | |
| TTTACAGTGGGTCATATTGA+TGG | + | tig0016189:11599-11618 | Msa1357790:intron | 35.0% | |
| GTTTATTCTTATTCTGCTGC+TGG | + | tig0016189:11632-11651 | Msa1357790:five_prime_UTR | 35.0% | |
| ACAACCAATCGGATCTAATA+AGG | + | tig0016189:11704-11723 | Msa1357790:CDS | 35.0% | |
| TATATTGTGCATGAAGGTTG+GGG | + | tig0016189:12018-12037 | Msa1357790:intron | 35.0% | |
| GCTTCTCTTCTTGAAGAAAT+AGG | + | tig0016189:12055-12074 | Msa1357790:CDS | 35.0% | |
| !!! | TCTCACGGAAAGCATTATTT+TGG | - | tig0016189:12093-12112 | Msa1357790:intergenic | 35.0% |
| AATAATGCTTTCCGTGAGAT+AGG | + | tig0016189:12094-12113 | Msa1357790:CDS | 35.0% | |
| AATATACCATGAAGTGGTCA+AGG | - | tig0016189:12132-12151 | Msa1357790:intergenic | 35.0% | |
| ACAACTAAACGAACTTTGCA+AGG | + | tig0016189:12397-12416 | Msa1357790:CDS | 35.0% | |
| CAACTAAACGAACTTTGCAA+GGG | + | tig0016189:12398-12417 | Msa1357790:CDS | 35.0% | |
| AACTAAACGAACTTTGCAAG+GGG | + | tig0016189:12399-12418 | Msa1357790:CDS | 35.0% | |
| TTTACCTGAACGGTTGTAAT+CGG | - | tig0016189:12441-12460 | Msa1357790:intergenic | 35.0% | |
| TGACAATTAAAAAGGAACGG+AGG | - | tig0016189:12705-12724 | Msa1357790:intergenic | 35.0% | |
| CTCTCCGCAATAAATAACAA+AGG | + | tig0016189:12842-12861 | Msa1357790:intron | 35.0% | |
| TCCTTCGAATTTAAATGCCT+TGG | + | tig0016189:13066-13085 | Msa1357790:intron | 35.0% | |
| CCTTCGAATTTAAATGCCTT+GGG | + | tig0016189:13067-13086 | Msa1357790:intron | 35.0% | |
| !! | AATCCTACTTTAGAGTCACT+TGG | - | tig0016189:13230-13249 | Msa1357790:intergenic | 35.0% |
| ! | ACTTGCTGACAAAGTTATAG+GGG | - | tig0016189:13516-13535 | Msa1357790:intergenic | 35.0% |
| ! | TTTTGGTACCCCTGAAAATA+TGG | + | tig0016189:13605-13624 | Msa1357790:intron | 35.0% |
| AAGTGTATCTCATTTAGCTG+TGG | - | tig0016189:13668-13687 | Msa1357790:intergenic | 35.0% | |
| TTTAGGCTCACACACATAAA+AGG | + | tig0016189:13716-13735 | Msa1357790:intron | 35.0% | |
| TTAGGCTCACACACATAAAA+GGG | + | tig0016189:13717-13736 | Msa1357790:intron | 35.0% | |
| ! | GGGAAAAGTATGAAATAGCA+AGG | + | tig0016189:13737-13756 | Msa1357790:intron | 35.0% |
| ! | CGTAACAACGTATTTTCTAG+AGG | + | tig0016189:13953-13972 | Msa1357790:intron | 35.0% |
| !! | ACAACGTATTTTCTAGAGGA+AGG | + | tig0016189:13957-13976 | Msa1357790:intron | 35.0% |
| ACTTACATGCTCTTTGTGAA+AGG | + | tig0016189:13986-14005 | Msa1357790:intron | 35.0% | |
| CTTACATGCTCTTTGTGAAA+GGG | + | tig0016189:13987-14006 | Msa1357790:intron | 35.0% | |
| GGGTAAAACTTCAGTTCTAT+TGG | + | tig0016189:14007-14026 | Msa1357790:intron | 35.0% | |
| CTACACAGTATCTGAAAGAA+AGG | - | tig0016189:14142-14161 | Msa1357790:intergenic | 35.0% | |
| TCAGCCACACACTAATATAT+AGG | + | tig0016189:14607-14626 | Msa1357790:intron | 35.0% | |
| GTTGCCTATATATTAGTGTG+TGG | - | tig0016189:14614-14633 | Msa1357790:intergenic | 35.0% | |
| CACACTAATATATAGGCAAC+GGG | + | tig0016189:14614-14633 | Msa1357790:intron | 35.0% | |
| ACACTAATATATAGGCAACG+GGG | + | tig0016189:14615-14634 | Msa1357790:intron | 35.0% | |
| !!! | TTTTGTGAAAATTCGGGTTG+GGG | - | tig0016189:14671-14690 | Msa1357790:intergenic | 35.0% |
| AAGAAATTGAATGTGGGTCT+CGG | - | tig0016189:14796-14815 | Msa1357790:intergenic | 35.0% | |
| AGACCCACATTCAATTTCTT+TGG | + | tig0016189:14796-14815 | Msa1357790:intron | 35.0% | |
| ! | GTTTAGTTTAGTTGGGTTTC+GGG | + | tig0016189:14828-14847 | Msa1357790:intron | 35.0% |
| ! | TTTAGTTTAGTTGGGTTTCG+GGG | + | tig0016189:14829-14848 | Msa1357790:intron | 35.0% |
| ! | GAAGGTTGACTTAATTGACA+AGG | - | tig0016189:14985-15004 | Msa1357790:intergenic | 35.0% |
| TGACTCATTCTTACATGAAC+GGG | - | tig0016189:15081-15100 | Msa1357790:intergenic | 35.0% | |
| ! | ATAGTGGAGTTTCCCTTAAA+CGG | + | tig0016189:15133-15152 | Msa1357790:intron | 35.0% |
| ! | CCATGTATTTGAGATTGGAT+TGG | - | tig0016189:15307-15326 | Msa1357790:intergenic | 35.0% |
| CCAATCCAATCTCAAATACA+TGG | + | tig0016189:15304-15323 | Msa1357790:intron | 35.0% | |
| !! | CCTAAGAGTACTTATGGAAT+GGG | - | tig0016189:15421-15440 | Msa1357790:intergenic | 35.0% |
| CCATTCCATAAGTACTCTTA+GGG | + | tig0016189:15419-15438 | Msa1357790:intron | 35.0% | |
| AGTACTATGTATGAGATCCT+GGG | + | tig0016189:15556-15575 | Msa1357790:intron | 35.0% | |
| GATGCATACACATAACACTA+GGG | - | tig0016189:15637-15656 | Msa1357790:intergenic | 35.0% | |
| TGATGCATACACATAACACT+AGG | - | tig0016189:15638-15657 | Msa1357790:intergenic | 35.0% | |
| GTCAGTTGAGTTAAGACTTA+TGG | - | tig0016189:15697-15716 | Msa1357790:intergenic | 35.0% | |
| GAAGAAACAACATTAGCCAT+TGG | - | tig0016189:15743-15762 | Msa1357790:intergenic | 35.0% | |
| !! | GAAGTATTGGTATCTGATAC+GGG | - | tig0016189:15804-15823 | Msa1357790:intergenic | 35.0% |
| TATGATACGATACAGGTACA+CGG | - | tig0016189:16226-16245 | Msa1357790:intergenic | 35.0% | |
| GAAAAGAGTAATTCACTGCT+AGG | - | tig0016189:16346-16365 | Msa1357790:intergenic | 35.0% | |
| ! | TTTTCTTCCTTTCCATGACA+AGG | + | tig0016189:16361-16380 | Msa1357790:intron | 35.0% |
| TCCCTACTCAAGTAATGAAA+TGG | + | tig0016189:16442-16461 | Msa1357790:intron | 35.0% | |
| CCCATTTCATTACTTGAGTA+GGG | - | tig0016189:16446-16465 | Msa1357790:intergenic | 35.0% | |
| CCCTACTCAAGTAATGAAAT+GGG | + | tig0016189:16443-16462 | Msa1357790:intron | 35.0% | |
| TCCCATTTCATTACTTGAGT+AGG | - | tig0016189:16447-16466 | Msa1357790:intergenic | 35.0% | |
| ATAATAAAATGTTGGAGGGG+GGG | + | tig0016189:16665-16684 | Msa1357790:intron | 35.0% | |
| TCGTGATCTAACCCAAAAAA+AGG | - | tig0016189:16979-16998 | Msa1357790:intergenic | 35.0% | |
| !!! | TTTTTTTGGGTTAGATCACG+AGG | + | tig0016189:16978-16997 | Msa1357790:intron | 35.0% |
| TCTTTAAGCTCTTTATCACC+TGG | - | tig0016189:17090-17109 | Msa1357790:intergenic | 35.0% | |
| TTACCTTAGCAACTTAAGAC+AGG | + | tig0016189:17134-17153 | Msa1357790:CDS | 35.0% | |
| ! | ATTCCTGTCTTAAGTTGCTA+AGG | - | tig0016189:17140-17159 | Msa1357790:intergenic | 35.0% |
| GACAGGAATTTCTCAAGAAA+AGG | + | tig0016189:17151-17170 | Msa1357790:CDS | 35.0% | |
| GAAAAAGGGTAAACTACCAA+AGG | + | tig0016189:17173-17192 | Msa1357790:CDS | 35.0% | |
| ! | AATGCTTTTCTTGCATCCTT+TGG | - | tig0016189:17192-17211 | Msa1357790:intergenic | 35.0% |
| !! | CAAGAAAAGCATTGATGGAT+TGG | + | tig0016189:17199-17218 | Msa1357790:CDS | 35.0% |
| ATTTGTATTACCGTGGGATA+AGG | - | tig0016189:17246-17265 | Msa1357790:intergenic | 35.0% | |
| AATTTCCTCGAATCATTCGT+TGG | - | tig0016189:17370-17389 | Msa1357790:intergenic | 35.0% | |
| ! | ATTTGAGTTCAAATCCTGAC+TGG | + | tig0016189:17387-17406 | Msa1357790:intron | 35.0% |
| GACCAAAAATTATTCCAGTC+AGG | - | tig0016189:17404-17423 | Msa1357790:intergenic | 35.0% | |
| TTTAACTCTCAACTGAACTC+CGG | + | tig0016189:17432-17451 | Msa1357790:intron | 35.0% | |
| TCCTTCATTTGGAAACAGAA+GGG | + | tig0016189:17467-17486 | Msa1357790:intron | 35.0% | |
| ! | TAACACCAACAAAATGGACT+AGG | - | tig0016189:17570-17589 | Msa1357790:intergenic | 35.0% |
| ACACTGTAACACCAACAAAA+TGG | - | tig0016189:17576-17595 | Msa1357790:intergenic | 35.0% | |
| ! | GTACTAGAAAACTTTTGGCA+TGG | + | tig0016189:17602-17621 | Msa1357790:intron | 35.0% |
| CAAATGCAAGTTAAGCTTGT+TGG | - | tig0016189:17647-17666 | Msa1357790:intergenic | 35.0% | |
| !! | GCTTAACTTGCATTTGCAAA+AGG | + | tig0016189:17651-17670 | Msa1357790:intron | 35.0% |
| TGGAATTGACGTTGTTATCT+TGG | - | tig0016189:17689-17708 | Msa1357790:intergenic | 35.0% | |
| AGCAAAGAAGCTTGACAAAA+TGG | - | tig0016189:17709-17728 | Msa1357790:intergenic | 35.0% | |
| !!! | TTGATGAATTTTTCAGGAGG+AGG | + | tig0016189:17775-17794 | Msa1357790:intron | 35.0% |
| CCTGCAGAATAAATTTACAG+AGG | - | tig0016189:17947-17966 | Msa1357790:intergenic | 35.0% | |
| CCTCTGTAAATTTATTCTGC+AGG | + | tig0016189:17944-17963 | Msa1357790:exon | 35.0% | |
| CTGTAAATTTATTCTGCAGG+TGG | + | tig0016189:17947-17966 | Msa1357790:exon | 35.0% | |
| TCCATGACATTCAAGCAAAT+GGG | - | tig0016189:18016-18035 | Msa1357790:intergenic | 35.0% | |
| ATCCATGACATTCAAGCAAA+TGG | - | tig0016189:18017-18036 | Msa1357790:intergenic | 35.0% | |
| ! | CCGGTTCGAAAAATTAACAT+AGG | - | tig0016189:18099-18118 | Msa1357790:intergenic | 35.0% |
| !! | ATGATGATTAGCCTTGGATT+TGG | + | tig0016189:18322-18341 | Msa1357790:three_prime_UTR | 35.0% |
| !! | AATAAGGTCTGGTCTTTTCC+AGG | + | tig0016189:11082-11101 | Msa1357790:five_prime_UTR | 40.0% |
| AAAGGAAAGAGTGGAAAGCT+GGG | - | tig0016189:11120-11139 | Msa1357790:intergenic | 40.0% | |
| CTGGTAAGCAGTCAAACAAA+AGG | - | tig0016189:11445-11464 | Msa1357790:intergenic | 40.0% | |
| ATTGGTTGTGTTCCATGTGA+AGG | - | tig0016189:11693-11712 | Msa1357790:intergenic | 40.0% | |
| TCACATGGAACACAACCAAT+CGG | + | tig0016189:11693-11712 | Msa1357790:exon | 40.0% | |
| CCAACCTTATTAGATCCGAT+TGG | - | tig0016189:11711-11730 | Msa1357790:intergenic | 40.0% | |
| CCAATCGGATCTAATAAGGT+TGG | + | tig0016189:11708-11727 | Msa1357790:CDS | 40.0% | |
| AGAAGAGAAGCAAGTTCTGT+TGG | - | tig0016189:12046-12065 | Msa1357790:intergenic | 40.0% | |
| !!! | CACGGAAAGCATTATTTTGG+TGG | - | tig0016189:12090-12109 | Msa1357790:intergenic | 40.0% |
| GAAAAAGTCCTGAACATGAG+TGG | + | tig0016189:12572-12591 | Msa1357790:intron | 40.0% | |
| AGACACTTAAAAAGGAACGG+AGG | + | tig0016189:12947-12966 | Msa1357790:intron | 40.0% | |
| GACACTTAAAAAGGAACGGA+GGG | + | tig0016189:12948-12967 | Msa1357790:intron | 40.0% | |
| TGCTAACTTAAGAGGACAGA+TGG | - | tig0016189:13022-13041 | Msa1357790:intergenic | 40.0% | |
| ACTAGCAGTGCTAACTTAAG+AGG | - | tig0016189:13030-13049 | Msa1357790:intergenic | 40.0% | |
| TGCTAGTAATGAGATCAAGC+TGG | + | tig0016189:13043-13062 | Msa1357790:intron | 40.0% | |
| ! | CCCAAGGCATTTAAATTCGA+AGG | - | tig0016189:13070-13089 | Msa1357790:intergenic | 40.0% |
| !! | GAACCAAGTGACTCTAAAGT+AGG | + | tig0016189:13224-13243 | Msa1357790:intron | 40.0% |
| CTTGATCCAAAGTCTACACT+CGG | + | tig0016189:13250-13269 | Msa1357790:intron | 40.0% | |
| !! | ACGTATTTTCTAGAGGAAGG+AGG | + | tig0016189:13960-13979 | Msa1357790:intron | 40.0% |
| TATATTAGTGTGTGGCTGAG+TGG | - | tig0016189:14606-14625 | Msa1357790:intergenic | 40.0% | |
| TAATATATAGGCAACGGGGT+GGG | + | tig0016189:14619-14638 | Msa1357790:intron | 40.0% | |
| !! | TTTGTGAAAATTCGGGTTGG+GGG | - | tig0016189:14670-14689 | Msa1357790:intergenic | 40.0% |
| TTTCAAACCCGGCAAAGTTT+GGG | - | tig0016189:14708-14727 | Msa1357790:intergenic | 40.0% | |
| ! | TTTTCAAACCCGGCAAAGTT+TGG | - | tig0016189:14709-14728 | Msa1357790:intergenic | 40.0% |
| !! | TGCGTGCTTATTTTCAAACC+CGG | - | tig0016189:14719-14738 | Msa1357790:intergenic | 40.0% |
| ! | CGGAATTTTCTTGATAGGAG+CGG | - | tig0016189:14776-14795 | Msa1357790:intergenic | 40.0% |
| ! | GGTCTCGGAATTTTCTTGAT+AGG | - | tig0016189:14781-14800 | Msa1357790:intergenic | 40.0% |
| CATTCTTACATGAACGGGTA+AGG | - | tig0016189:15076-15095 | Msa1357790:intergenic | 40.0% | |
| ! | TTAACTTGGCCACATCATAG+TGG | + | tig0016189:15117-15136 | Msa1357790:intron | 40.0% |
| TAGTGGAGTTTCCCTTAAAC+GGG | + | tig0016189:15134-15153 | Msa1357790:intron | 40.0% | |
| ! | ATCATAGAAAGCGCATGTCT+TGG | - | tig0016189:15258-15277 | Msa1357790:intergenic | 40.0% |
| CCCATTCCATAAGTACTCTT+AGG | + | tig0016189:15418-15437 | Msa1357790:intron | 40.0% | |
| !! | CCCTAAGAGTACTTATGGAA+TGG | - | tig0016189:15422-15441 | Msa1357790:intergenic | 40.0% |
| TTCCATAAGTACTCTTAGGG+AGG | + | tig0016189:15422-15441 | Msa1357790:intron | 40.0% | |
| !! | ATCCTCCCTAAGAGTACTTA+TGG | - | tig0016189:15427-15446 | Msa1357790:intergenic | 40.0% |
| AGACCATAAGCCACTGAAAT+TGG | + | tig0016189:15514-15533 | Msa1357790:intron | 40.0% | |
| GAGTACTATGTATGAGATCC+TGG | + | tig0016189:15555-15574 | Msa1357790:intron | 40.0% | |
| TTCTTCTATCCTATGAAGCC+CGG | + | tig0016189:15757-15776 | Msa1357790:intron | 40.0% | |
| CAATACTTCACGGATACTCT+CGG | + | tig0016189:15815-15834 | Msa1357790:intron | 40.0% | |
| !! | TGAAGTATCGGTATCCGATA+CGG | - | tig0016189:15849-15868 | Msa1357790:intergenic | 40.0% |
| TATCGGATACCGATACTTCA+CGG | + | tig0016189:15849-15868 | Msa1357790:intron | 40.0% | |
| TAGATAGAAGCTATGAAGCC+CGG | - | tig0016189:16267-16286 | Msa1357790:intergenic | 40.0% | |
| ! | GATATAATGCAGCCTTGTCA+TGG | - | tig0016189:16376-16395 | Msa1357790:intergenic | 40.0% |
| ! | CATGCATGGTGAGAATGTTT+TGG | + | tig0016189:16490-16509 | Msa1357790:intron | 40.0% |
| CGTACATACCATGAAAGAGA+TGG | + | tig0016189:16573-16592 | Msa1357790:intron | 40.0% | |
| ! | AAGTATAGGGCTGACTCATT+CGG | + | tig0016189:16728-16747 | Msa1357790:intron | 40.0% |
| TCAGAGGATGAAATGAGTTG+TGG | + | tig0016189:17012-17031 | Msa1357790:CDS | 40.0% | |
| GGATGAAATGAGTTGTGGAA+AGG | + | tig0016189:17017-17036 | Msa1357790:CDS | 40.0% | |
| GAAATGCTCCTTCGTAAGTA+CGG | + | tig0016189:17108-17127 | Msa1357790:CDS | 40.0% | |
| AAATGCTCCTTCGTAAGTAC+GGG | + | tig0016189:17109-17128 | Msa1357790:CDS | 40.0% | |
| !! | GGATGCAAGAAAAGCATTGA+TGG | + | tig0016189:17194-17213 | Msa1357790:CDS | 40.0% |
| !! | GAAAAGCATTGATGGATTGG+TGG | + | tig0016189:17202-17221 | Msa1357790:CDS | 40.0% |
| TTTGTCCAACGAATGATTCG+AGG | + | tig0016189:17362-17381 | Msa1357790:intron | 40.0% | |
| TTTCCAAATGAAGGAGACTC+CGG | - | tig0016189:17462-17481 | Msa1357790:intergenic | 40.0% | |
| CTCCTTCATTTGGAAACAGA+AGG | + | tig0016189:17466-17485 | Msa1357790:intron | 40.0% | |
| ACCCTTCTGTTTCCAAATGA+AGG | - | tig0016189:17471-17490 | Msa1357790:intergenic | 40.0% | |
| ! | AGGTTCCTAGTCCATTTTGT+TGG | + | tig0016189:17562-17581 | Msa1357790:intron | 40.0% |
| ! | AGAAAACTTTTGGCATGGTG+AGG | + | tig0016189:17607-17626 | Msa1357790:intron | 40.0% |
| TCAATCAGAGGAAAAGACAC+TGG | + | tig0016189:17858-17877 | Msa1357790:CDS | 40.0% | |
| CTTCTTTCGCAGATTAAGAC+AGG | - | tig0016189:17989-18008 | Msa1357790:intergenic | 40.0% | |
| ACCCATTTGCTTGAATGTCA+TGG | + | tig0016189:18012-18031 | Msa1357790:three_prime_UTR | 40.0% | |
| !! | TCTGGATTGGACTTTTGAGA+TGG | - | tig0016189:18061-18080 | Msa1357790:intergenic | 40.0% |
| ! | ATAGGCGTATTGTTCTGGAT+TGG | - | tig0016189:18074-18093 | Msa1357790:intergenic | 40.0% |
| AGACACACACTCTCACAACA+AGG | - | tig0016189:11016-11035 | None:intergenic | 45.0% | |
| ! | TCCTTTTCCCCAGGTTTTCT+TGG | + | tig0016189:11045-11064 | Msa1357790:five_prime_UTR | 45.0% |
| TCCAAGAAAACCTGGGGAAA+AGG | - | tig0016189:11049-11068 | Msa1357790:intergenic | 45.0% | |
| GAAAGGAAAGAGTGGAAAGC+TGG | - | tig0016189:11121-11140 | Msa1357790:intergenic | 45.0% | |
| AGAAGTGGGAAAGGAAAGAG+TGG | - | tig0016189:11129-11148 | Msa1357790:intergenic | 45.0% | |
| GTTTCTTCTCTAGCTAGCTG+AGG | + | tig0016189:11156-11175 | Msa1357790:intron | 45.0% | |
| ! | AGTGGGTCATATTGATGGCA+AGG | + | tig0016189:11604-11623 | Msa1357790:intron | 45.0% |
| CAGGATCATCTCCTATCTCA+CGG | - | tig0016189:12108-12127 | Msa1357790:intergenic | 45.0% | |
| ! | TGTTGCTTCATTGAAGGGCT+TGG | - | tig0016189:12354-12373 | Msa1357790:intergenic | 45.0% |
| TCATCCGATTACAACCGTTC+AGG | + | tig0016189:12434-12453 | Msa1357790:CDS | 45.0% | |
| TAACTGCAGTGCCTCATTTG+TGG | - | tig0016189:13396-13415 | Msa1357790:intergenic | 45.0% | |
| !! | TCCAGGGCACCATATTTTCA+GGG | - | tig0016189:13617-13636 | Msa1357790:intergenic | 45.0% |
| TCGGTACACTTTGTACGAGA+TGG | + | tig0016189:14188-14207 | Msa1357790:intron | 45.0% | |
| AGTGGAATACGAGAGACACT+CGG | - | tig0016189:14588-14607 | Msa1357790:intergenic | 45.0% | |
| CTAATATATAGGCAACGGGG+TGG | + | tig0016189:14618-14637 | Msa1357790:intron | 45.0% | |
| CATTTGTCCCCAAACTTTGC+CGG | + | tig0016189:14697-14716 | Msa1357790:intron | 45.0% | |
| ATTTGTCCCCAAACTTTGCC+GGG | + | tig0016189:14698-14717 | Msa1357790:intron | 45.0% | |
| TTCAAACCCGGCAAAGTTTG+GGG | - | tig0016189:14707-14726 | Msa1357790:intergenic | 45.0% | |
| GTACATATCACCCACCAAAG+AGG | + | tig0016189:14907-14926 | Msa1357790:intron | 45.0% | |
| AGTCCTACCCACAACTTTGT+GGG | + | tig0016189:14949-14968 | Msa1357790:intron | 45.0% | |
| TGACTCACCCACAAAGTTGT+GGG | - | tig0016189:14959-14978 | Msa1357790:intergenic | 45.0% | |
| TTGACTCACCCACAAAGTTG+TGG | - | tig0016189:14960-14979 | Msa1357790:intergenic | 45.0% | |
| TTACATGAACGGGTAAGGTG+AGG | - | tig0016189:15071-15090 | Msa1357790:intergenic | 45.0% | |
| AGGGAAACTCCACTATGATG+TGG | - | tig0016189:15129-15148 | Msa1357790:intergenic | 45.0% | |
| AGTGGAGTTTCCCTTAAACG+GGG | + | tig0016189:15135-15154 | Msa1357790:intron | 45.0% | |
| GGACCAATTTCAGTGGCTTA+TGG | - | tig0016189:15520-15539 | Msa1357790:intergenic | 45.0% | |
| AGCCACTGAAATTGGTCCAA+TGG | + | tig0016189:15522-15541 | Msa1357790:intron | 45.0% | |
| CACCATTGGACCAATTTCAG+TGG | - | tig0016189:15527-15546 | Msa1357790:intergenic | 45.0% | |
| CTGAAATTGGTCCAATGGTG+AGG | + | tig0016189:15527-15546 | Msa1357790:intron | 45.0% | |
| GTACTCAAACTCCTCACCAT+TGG | - | tig0016189:15541-15560 | Msa1357790:intergenic | 45.0% | |
| !! | CGAGAGTATCCGTGAAGTAT+TGG | - | tig0016189:15817-15836 | Msa1357790:intergenic | 45.0% |
| !! | GAAGTATCGGTATCCGATAC+GGG | - | tig0016189:15848-15867 | Msa1357790:intergenic | 45.0% |
| !! | CGAGAGTATCCGTGAAGTAT+CGG | - | tig0016189:15817-15836 | Msa1357790:intergenic | 45.0% |
| CGATACTTCACGGATACTCT+CGG | + | tig0016189:15859-15878 | Msa1357790:intron | 45.0% | |
| ACCCGCACTCATATAGTATC+CGG | + | tig0016189:16245-16264 | Msa1357790:intron | 45.0% | |
| ! | AATGCAGCCTTGTCATGGAA+AGG | - | tig0016189:16371-16390 | Msa1357790:intergenic | 45.0% |
| GATTGGGACCATCTCTTTCA+TGG | - | tig0016189:16584-16603 | Msa1357790:intergenic | 45.0% | |
| GGAAAGGTTGAAGCAGTAGA+AGG | + | tig0016189:17033-17052 | Msa1357790:CDS | 45.0% | |
| AAGGTTGAAGCAGTAGAAGG+TGG | + | tig0016189:17036-17055 | Msa1357790:CDS | 45.0% | |
| GGTGGTCATGATGAACTTTG+TGG | + | tig0016189:17054-17073 | Msa1357790:CDS | 45.0% | |
| AATGCTCCTTCGTAAGTACG+GGG | + | tig0016189:17110-17129 | Msa1357790:CDS | 45.0% | |
| ATTGGTGGAACGTCCACTAT+AGG | + | tig0016189:17217-17236 | Msa1357790:CDS | 45.0% | |
| TCAACTGAACTCCGGATTAC+CGG | + | tig0016189:17440-17459 | Msa1357790:intron | 45.0% | |
| TTACCGGAGTCTCCTTCATT+TGG | + | tig0016189:17456-17475 | Msa1357790:intron | 45.0% | |
| ACAGACCTACTCAGTGACAT+AGG | - | tig0016189:18124-18143 | Msa1357790:intergenic | 45.0% | |
| ! | AAGTTTCTTGCTAGAGGTGC+AGG | + | tig0016189:18292-18311 | Msa1357790:three_prime_UTR | 45.0% |
| !! | TATATTATTGTTTAAATTAT+TGG | + | tig0016189:11372-11391 | Msa1357790:intron | 5.0% |
| !!! | TTTTATTAAATATTTTATAG+TGG | - | tig0016189:13360-13379 | Msa1357790:intergenic | 5.0% |
| ! | TCCTCTCTTTCCTTTTCCCC+AGG | + | tig0016189:11036-11055 | Msa1357790:five_prime_UTR | 50.0% |
| ACCTGGGGAAAAGGAAAGAG+AGG | - | tig0016189:11040-11059 | Msa1357790:intergenic | 50.0% | |
| GAAAGAGTGGAAAGCTGGGT+TGG | - | tig0016189:11116-11135 | Msa1357790:intergenic | 50.0% | |
| TACAGCATCAAGACCCGTGT+AGG | - | tig0016189:11272-11291 | Msa1357790:intergenic | 50.0% | |
| TCTGCTGCTGGATTGCATCT+AGG | + | tig0016189:11644-11663 | Msa1357790:five_prime_UTR | 50.0% | |
| AAAGAGGGTGAGTTGCGATC+TGG | - | tig0016189:11759-11778 | Msa1357790:intergenic | 50.0% | |
| TCCTGACCTTGACCACTTCA+TGG | + | tig0016189:12123-12142 | Msa1357790:CDS | 50.0% | |
| ACCATGAAGTGGTCAAGGTC+AGG | - | tig0016189:12127-12146 | Msa1357790:intergenic | 50.0% | |
| GAAAAGGGCCACTCATGTTC+AGG | - | tig0016189:12583-12602 | Msa1357790:intergenic | 50.0% | |
| ACCATCTCATGATTCGCCCA+AGG | - | tig0016189:13086-13105 | Msa1357790:intergenic | 50.0% | |
| !! | CAAGTGCCGAGTGTAGACTT+TGG | - | tig0016189:13259-13278 | Msa1357790:intergenic | 50.0% |
| !! | CCAGGGCACCATATTTTCAG+GGG | - | tig0016189:13616-13635 | Msa1357790:intergenic | 50.0% |
| !! | GTCCAGGGCACCATATTTTC+AGG | - | tig0016189:13618-13637 | Msa1357790:intergenic | 50.0% |
| TTAGCTGTGGTCCTGAGCAT+GGG | - | tig0016189:13655-13674 | Msa1357790:intergenic | 50.0% | |
| TTTAGCTGTGGTCCTGAGCA+TGG | - | tig0016189:13656-13675 | Msa1357790:intergenic | 50.0% | |
| TTCTTGATAGGAGCGGTACG+AGG | - | tig0016189:14769-14788 | Msa1357790:intergenic | 50.0% | |
| AATGCGAGGACCTCTTTGGT+GGG | - | tig0016189:14920-14939 | Msa1357790:intergenic | 50.0% | |
| TACCAATGCGAGGACCTCTT+TGG | - | tig0016189:14924-14943 | Msa1357790:intergenic | 50.0% | |
| GAGTCCTACCCACAACTTTG+TGG | + | tig0016189:14948-14967 | Msa1357790:intron | 50.0% | |
| TCACCCACAAAGTTGTGGGT+AGG | - | tig0016189:14955-14974 | Msa1357790:intergenic | 50.0% | |
| ACCAAATCCGCCCCGTTTAA+GGG | - | tig0016189:15148-15167 | Msa1357790:intergenic | 50.0% | |
| ! | TTAAACGGGGCGGATTTGGT+CGG | + | tig0016189:15148-15167 | Msa1357790:intron | 50.0% |
| AATGGAGACGGTTTGAACCC+AGG | - | tig0016189:15576-15595 | Msa1357790:intergenic | 50.0% | |
| ! | TTGGAGTATCCGGGCTTCAT+AGG | - | tig0016189:15769-15788 | Msa1357790:intergenic | 50.0% |
| GAAGCCCGGATACTCCAAAA+CGG | + | tig0016189:15771-15790 | Msa1357790:intron | 50.0% | |
| !!! | GTGTCCGTTTTGGAGTATCC+GGG | - | tig0016189:15778-15797 | Msa1357790:intergenic | 50.0% |
| !!! | CGTGTCCGTTTTGGAGTATC+CGG | - | tig0016189:15779-15798 | Msa1357790:intergenic | 50.0% |
| ! | ATACGGGTACGTGTCCGTTT+TGG | - | tig0016189:15788-15807 | Msa1357790:intergenic | 50.0% |
| TCTCGGATACGTACCCGTAT+CGG | + | tig0016189:15832-15851 | Msa1357790:intron | 50.0% | |
| GTGCGGGTATGATACGATAC+AGG | - | tig0016189:16233-16252 | Msa1357790:intergenic | 50.0% | |
| CCCGGATACTATATGAGTGC+GGG | - | tig0016189:16249-16268 | Msa1357790:intergenic | 50.0% | |
| CCCGCACTCATATAGTATCC+GGG | + | tig0016189:16246-16265 | Msa1357790:intron | 50.0% | |
| GCCCGGATACTATATGAGTG+CGG | - | tig0016189:16250-16269 | Msa1357790:intergenic | 50.0% | |
| CTTTGTGGCACATCATGTCC+AGG | + | tig0016189:17069-17088 | Msa1357790:CDS | 50.0% | |
| ATGCTCCTTCGTAAGTACGG+GGG | + | tig0016189:17111-17130 | Msa1357790:CDS | 50.0% | |
| TGGGATAAGGCCACCTATAG+TGG | - | tig0016189:17233-17252 | Msa1357790:intergenic | 50.0% | |
| !! | CTATAGGTGGCCTTATCCCA+CGG | + | tig0016189:17233-17252 | Msa1357790:CDS | 50.0% |
| TGAAGGAGACTCCGGTAATC+CGG | - | tig0016189:17454-17473 | Msa1357790:intergenic | 50.0% | |
| CTGCAGCTGTCAGATATGAC+TGG | + | tig0016189:17803-17822 | Msa1357790:CDS | 50.0% | |
| GTAAGTAGCACCAGCATAGC+AGG | + | tig0016189:17920-17939 | Msa1357790:CDS | 50.0% | |
| TTACAGAGGTCCTGCTATGC+TGG | - | tig0016189:17933-17952 | Msa1357790:intergenic | 50.0% | |
| AGGGCATAGGCGTATTGTTC+TGG | - | tig0016189:18079-18098 | Msa1357790:intergenic | 50.0% | |
| CTACTCAGTGACATAGGTGC+CGG | - | tig0016189:18118-18137 | Msa1357790:intergenic | 50.0% | |
| GCTGCTGGATTGCATCTAGG+AGG | + | tig0016189:11647-11666 | Msa1357790:five_prime_UTR | 55.0% | |
| GCCTTGGGCGAATCATGAGA+TGG | + | tig0016189:13082-13101 | Msa1357790:intron | 55.0% | |
| CCCCTGAAAATATGGTGCCC+TGG | + | tig0016189:13613-13632 | Msa1357790:intron | 55.0% | |
| ! | TATAGGCAACGGGGTGGGTT+AGG | + | tig0016189:14624-14643 | Msa1357790:intron | 55.0% |
| !! | ATAGGCAACGGGGTGGGTTA+GGG | + | tig0016189:14625-14644 | Msa1357790:intron | 55.0% |
| AGGAAACTCAGCCCCGATTG+GGG | - | tig0016189:14749-14768 | Msa1357790:intergenic | 55.0% | |
| GAGGAAACTCAGCCCCGATT+GGG | - | tig0016189:14750-14769 | Msa1357790:intergenic | 55.0% | |
| CAATGCGAGGACCTCTTTGG+TGG | - | tig0016189:14921-14940 | Msa1357790:intergenic | 55.0% | |
| CACCAAAGAGGTCCTCGCAT+TGG | + | tig0016189:14919-14938 | Msa1357790:intron | 55.0% | |
| GGACTCATGCTACCAATGCG+AGG | - | tig0016189:14934-14953 | Msa1357790:intergenic | 55.0% | |
| GGAGTTTCCCTTAAACGGGG+CGG | + | tig0016189:15138-15157 | Msa1357790:intron | 55.0% | |
| ! | TCCCTTAAACGGGGCGGATT+TGG | + | tig0016189:15144-15163 | Msa1357790:intron | 55.0% |
| GACCAAATCCGCCCCGTTTA+AGG | - | tig0016189:15149-15168 | Msa1357790:intergenic | 55.0% | |
| ! | TAAACGGGGCGGATTTGGTC+GGG | + | tig0016189:15149-15168 | Msa1357790:intron | 55.0% |
| ! | GGATTTGGTCGGGTTTGGGT+AGG | + | tig0016189:15159-15178 | Msa1357790:intron | 55.0% |
| TTTGGTCGGGTTTGGGTAGG+TGG | + | tig0016189:15162-15181 | Msa1357790:intron | 55.0% | |
| TTGGTCGGGTTTGGGTAGGT+GGG | + | tig0016189:15163-15182 | Msa1357790:intron | 55.0% | |
| GGTTAGATCACGAGGCAGCA+GGG | + | tig0016189:16986-17005 | Msa1357790:intron | 55.0% | |
| GGTAACCCCCGTACTTACGA+AGG | - | tig0016189:17119-17138 | Msa1357790:intergenic | 55.0% | |
| GGTGGAACGTCCACTATAGG+TGG | + | tig0016189:17220-17239 | Msa1357790:CDS | 55.0% | |
| CGGCACCTATGTCACTGAGT+AGG | + | tig0016189:18116-18135 | Msa1357790:three_prime_UTR | 55.0% | |
| AGGACAGATGGTCGTGACGC+GGG | - | tig0016189:13010-13029 | Msa1357790:intergenic | 60.0% | |
| GAGGACAGATGGTCGTGACG+CGG | - | tig0016189:13011-13030 | Msa1357790:intergenic | 60.0% | |
| CACGCATTTCCGCCCCCAAT+CGG | + | tig0016189:14733-14752 | Msa1357790:intron | 60.0% | |
| ACGCATTTCCGCCCCCAATC+GGG | + | tig0016189:14734-14753 | Msa1357790:intron | 60.0% | |
| GGAAACTCAGCCCCGATTGG+GGG | - | tig0016189:14748-14767 | Msa1357790:intergenic | 60.0% | |
| CGAGGAAACTCAGCCCCGAT+TGG | - | tig0016189:14751-14770 | Msa1357790:intergenic | 60.0% | |
| ! | GGGCGGATTTGGTCGGGTTT+GGG | + | tig0016189:15155-15174 | Msa1357790:intron | 60.0% |
| GGGTTAGATCACGAGGCAGC+AGG | + | tig0016189:16985-17004 | Msa1357790:intron | 60.0% | |
| !! | GCTGGGTTGGCTACAGCACC+TGG | - | tig0016189:11103-11122 | Msa1357790:intergenic | 65.0% |
| TGGTCCTGAGCATGGGCCGA+GGG | - | tig0016189:13648-13667 | Msa1357790:intergenic | 65.0% | |
| CGCATTTCCGCCCCCAATCG+GGG | + | tig0016189:14735-14754 | Msa1357790:intron | 65.0% | |
| AACTCAGCCCCGATTGGGGG+CGG | - | tig0016189:14745-14764 | Msa1357790:intergenic | 65.0% | |
| ! | GGGGCGGATTTGGTCGGGTT+TGG | + | tig0016189:15154-15173 | Msa1357790:intron | 65.0% |
| CGAGGCAGCAGGGACATCAG+AGG | + | tig0016189:16996-17015 | Msa1357790:CDS | 65.0% | |
| GTCCTGAGCATGGGCCGAGG+GGG | - | tig0016189:13646-13665 | Msa1357790:intergenic | 70.0% | |
| GGTCCTGAGCATGGGCCGAG+GGG | - | tig0016189:13647-13666 | Msa1357790:intergenic | 70.0% | |
| GTGGTCCTGAGCATGGGCCG+AGG | - | tig0016189:13649-13668 | Msa1357790:intergenic | 70.0% | |
| GCCCTGGACTGCCTCCCCCT+CGG | + | tig0016189:13629-13648 | Msa1357790:intron | 75.0% | |
| GCCGAGGGGGAGGCAGTCCA+GGG | - | tig0016189:13633-13652 | Msa1357790:intergenic | 75.0% | |
| CTGAGCATGGGCCGAGGGGG+AGG | - | tig0016189:13643-13662 | Msa1357790:intergenic | 75.0% | |
| CTCCCCCTCGGCCCATGCTC+AGG | + | tig0016189:13641-13660 | Msa1357790:intron | 75.0% | |
| ! | GGCCGAGGGGGAGGCAGTCC+AGG | - | tig0016189:13634-13653 | Msa1357790:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016189 | gene | 10950 | 18345 | 10950 | ID=Msa1357790;Name=Msa1357790 |
| tig0016189 | mRNA | 10950 | 18345 | 10950 | ID=Msa1357790-mRNA-1;Parent=Msa1357790;Name=Msa1357790-mRNA-1;_AED=0.04;_eAED=0.04;_QI=293|1|1|1|0.8|0.66|6|393|267 |
| tig0016189 | exon | 10950 | 11151 | 10950 | ID=Msa1357790-mRNA-1:exon:10506;Parent=Msa1357790-mRNA-1 |
| tig0016189 | exon | 11606 | 11816 | 11606 | ID=Msa1357790-mRNA-1:exon:10507;Parent=Msa1357790-mRNA-1 |
| tig0016189 | exon | 12034 | 12144 | 12034 | ID=Msa1357790-mRNA-1:exon:10508;Parent=Msa1357790-mRNA-1 |
| tig0016189 | exon | 12308 | 12455 | 12308 | ID=Msa1357790-mRNA-1:exon:10509;Parent=Msa1357790-mRNA-1 |
| tig0016189 | exon | 16992 | 17254 | 16992 | ID=Msa1357790-mRNA-1:exon:10510;Parent=Msa1357790-mRNA-1 |
| tig0016189 | exon | 17791 | 18345 | 17791 | ID=Msa1357790-mRNA-1:exon:10511;Parent=Msa1357790-mRNA-1 |
| tig0016189 | five_prime_UTR | 10950 | 11151 | 10950 | ID=Msa1357790-mRNA-1:five_prime_utr;Parent=Msa1357790-mRNA-1 |
| tig0016189 | five_prime_UTR | 11606 | 11696 | 11606 | ID=Msa1357790-mRNA-1:five_prime_utr;Parent=Msa1357790-mRNA-1 |
| tig0016189 | CDS | 11697 | 11816 | 11697 | ID=Msa1357790-mRNA-1:cds;Parent=Msa1357790-mRNA-1 |
| tig0016189 | CDS | 12034 | 12144 | 12034 | ID=Msa1357790-mRNA-1:cds;Parent=Msa1357790-mRNA-1 |
| tig0016189 | CDS | 12308 | 12455 | 12308 | ID=Msa1357790-mRNA-1:cds;Parent=Msa1357790-mRNA-1 |
| tig0016189 | CDS | 16992 | 17254 | 16992 | ID=Msa1357790-mRNA-1:cds;Parent=Msa1357790-mRNA-1 |
| tig0016189 | CDS | 17791 | 17952 | 17791 | ID=Msa1357790-mRNA-1:cds;Parent=Msa1357790-mRNA-1 |
| tig0016189 | three_prime_UTR | 17953 | 18345 | 17953 | ID=Msa1357790-mRNA-1:three_prime_utr;Parent=Msa1357790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
