Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85940.t1 | XP_003597972.1 | 85.1 | 316 | 39 | 2 | 100 | 408 | 1 | 315 | 9.00E-137 | 496.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85940.t1 | Q9T072 | 46.2 | 184 | 91 | 4 | 229 | 405 | 144 | 326 | 6.1e-33 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85940.t1 | G7IMB3 | 85.1 | 316 | 39 | 2 | 100 | 408 | 1 | 315 | 6.5e-137 | 496.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene85940.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene85940 | 0.831723 | 1.42E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene85940 | 0.849461 | 3.19E-60 | -1.69E-46 |
| MS.gene049232 | MS.gene85940 | 0.874921 | 4.63E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene85940 | 0.840711 | 7.38E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene85940 | 0.872119 | 4.06E-67 | -1.69E-46 |
| MS.gene049369 | MS.gene85940 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene049396 | MS.gene85940 | 0.804793 | 1.82E-49 | -1.69E-46 |
| MS.gene049552 | MS.gene85940 | 0.819863 | 9.29E-53 | -1.69E-46 |
| MS.gene049600 | MS.gene85940 | 0.800757 | 1.24E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene85940 | 0.838483 | 2.80E-57 | -1.69E-46 |
| MS.gene049656 | MS.gene85940 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene85940 | 0.855366 | 6.62E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene85940 | 0.819538 | 1.10E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene85940 | 0.814063 | 1.86E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene85940 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene85940 | 0.857722 | 1.34E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene85940 | 0.832856 | 7.45E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene85940 | 0.831929 | 1.26E-55 | -1.69E-46 |
| MS.gene050380 | MS.gene85940 | -0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene85940 | -0.834525 | 2.85E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene85940 | 0.827736 | 1.33E-54 | -1.69E-46 |
| MS.gene050499 | MS.gene85940 | 0.833736 | 4.49E-56 | -1.69E-46 |
| MS.gene050502 | MS.gene85940 | 0.853504 | 2.29E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene85940 | 0.85102 | 1.16E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene85940 | 0.832227 | 1.07E-55 | -1.69E-46 |
| MS.gene050520 | MS.gene85940 | 0.80919 | 2.14E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene85940 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene85940 | 0.801582 | 8.41E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene85940 | 0.850939 | 1.23E-60 | -1.69E-46 |
| MS.gene050662 | MS.gene85940 | 0.825195 | 5.35E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene85940 | 0.84363 | 1.25E-58 | -1.69E-46 |
| MS.gene050686 | MS.gene85940 | 0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene85940 | 0.83551 | 1.61E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene85940 | 0.830883 | 2.28E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene85940 | 0.871036 | 9.28E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene85940 | 0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene85940 | 0.830026 | 3.70E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene85940 | 0.831387 | 1.72E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene85940 | -0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene85940 | 0.826526 | 2.59E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene85940 | 0.854258 | 1.39E-61 | -1.69E-46 |
| MS.gene05100 | MS.gene85940 | 0.803573 | 3.27E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene85940 | -0.812334 | 4.47E-51 | -1.69E-46 |
| MS.gene05118 | MS.gene85940 | 0.800971 | 1.12E-48 | -1.69E-46 |
| MS.gene051268 | MS.gene85940 | 0.809034 | 2.31E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene85940 | 0.875448 | 3.06E-68 | -1.69E-46 |
| MS.gene051551 | MS.gene85940 | 0.835407 | 1.71E-56 | -1.69E-46 |
| MS.gene051564 | MS.gene85940 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene85940 | 0.810725 | 9.99E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene85940 | 0.803999 | 2.67E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene85940 | 0.818114 | 2.32E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene85940 | 0.844448 | 7.51E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene85940 | 0.820775 | 5.74E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene85940 | 0.829805 | 4.19E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene85940 | 0.816951 | 4.24E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene85940 | 0.821674 | 3.56E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene85940 | 0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene85940 | 0.83045 | 2.92E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene85940 | 0.817074 | 3.98E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene85940 | 0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene85940 | 0.845412 | 4.13E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene85940 | 0.827904 | 1.21E-54 | -1.69E-46 |
| MS.gene053018 | MS.gene85940 | 0.875876 | 2.18E-68 | -1.69E-46 |
| MS.gene053203 | MS.gene85940 | 0.831672 | 1.46E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene85940 | 0.874105 | 8.76E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene85940 | 0.870983 | 9.66E-67 | -1.69E-46 |
| MS.gene053420 | MS.gene85940 | -0.834247 | 3.35E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene85940 | 0.881443 | 2.39E-70 | -1.69E-46 |
| MS.gene053505 | MS.gene85940 | 0.815793 | 7.70E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene85940 | -0.811175 | 7.99E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene85940 | 0.881395 | 2.49E-70 | -1.69E-46 |
| MS.gene053626 | MS.gene85940 | 0.8329 | 7.26E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene85940 | 0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene85940 | 0.810109 | 1.36E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene85940 | 0.812215 | 4.74E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene85940 | 0.84231 | 2.80E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene85940 | 0.819486 | 1.13E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene85940 | 0.852153 | 5.56E-61 | -1.69E-46 |
| MS.gene054708 | MS.gene85940 | -0.803386 | 3.57E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene85940 | 0.856468 | 3.15E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene85940 | 0.813707 | 2.23E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene85940 | -0.849435 | 3.24E-60 | -1.69E-46 |
| MS.gene055202 | MS.gene85940 | -0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene055212 | MS.gene85940 | 0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene85940 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene85940 | 0.869221 | 3.64E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene85940 | 0.837641 | 4.61E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene85940 | 0.819822 | 9.49E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene85940 | 0.851165 | 1.06E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene85940 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene055776 | MS.gene85940 | 0.8242 | 9.18E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene85940 | 0.820375 | 7.09E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene85940 | 0.813491 | 2.49E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene85940 | 0.803368 | 3.60E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene85940 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene85940 | 0.803688 | 3.09E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene85940 | 0.836724 | 7.91E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene85940 | 0.828361 | 9.38E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene85940 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene056448 | MS.gene85940 | 0.828096 | 1.09E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene85940 | 0.820801 | 5.66E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene85940 | 0.874735 | 5.35E-68 | -1.69E-46 |
| MS.gene056510 | MS.gene85940 | 0.827188 | 1.80E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene85940 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene85940 | 0.871637 | 5.87E-67 | -1.69E-46 |
| MS.gene056878 | MS.gene85940 | 0.846525 | 2.06E-59 | -1.69E-46 |
| MS.gene056942 | MS.gene85940 | 0.814005 | 1.92E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene85940 | 0.835484 | 1.63E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene85940 | 0.823778 | 1.15E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene85940 | 0.83026 | 3.25E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene85940 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene85940 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene85940 | 0.811333 | 7.38E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene85940 | 0.805287 | 1.44E-49 | -1.69E-46 |
| MS.gene058041 | MS.gene85940 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene058109 | MS.gene85940 | -0.813918 | 2.01E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene85940 | 0.820606 | 6.28E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene85940 | -0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene85940 | 0.821487 | 3.93E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene85940 | -0.815489 | 9.01E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene85940 | 0.820378 | 7.08E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene85940 | 0.845222 | 4.65E-59 | -1.69E-46 |
| MS.gene058459 | MS.gene85940 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene85940 | 0.808857 | 2.52E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene85940 | 0.857335 | 1.75E-62 | -1.69E-46 |
| MS.gene05883 | MS.gene85940 | 0.811469 | 6.89E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene85940 | -0.804946 | 1.69E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene85940 | 0.864098 | 1.55E-64 | -1.69E-46 |
| MS.gene059034 | MS.gene85940 | 0.818583 | 1.82E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene85940 | 0.839798 | 1.28E-57 | -1.69E-46 |
| MS.gene059305 | MS.gene85940 | 0.806186 | 9.30E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene85940 | 0.859027 | 5.49E-63 | -1.69E-46 |
| MS.gene059368 | MS.gene85940 | 0.811604 | 6.44E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene85940 | 0.840241 | 9.79E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene85940 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene85940 | 0.853541 | 2.23E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene85940 | 0.807244 | 5.56E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene85940 | 0.86234 | 5.43E-64 | -1.69E-46 |
| MS.gene059902 | MS.gene85940 | 0.81686 | 4.45E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene85940 | 0.908509 | 1.58E-81 | -1.69E-46 |
| MS.gene060595 | MS.gene85940 | -0.817595 | 3.04E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene85940 | 0.817212 | 3.71E-52 | -1.69E-46 |
| MS.gene060728 | MS.gene85940 | 0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene85940 | 0.831239 | 1.87E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene85940 | 0.848691 | 5.21E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene85940 | 0.854337 | 1.32E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene85940 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene85940 | 0.808952 | 2.40E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene85940 | 0.801674 | 8.06E-49 | -1.69E-46 |
| MS.gene06097 | MS.gene85940 | 0.810495 | 1.12E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene85940 | 0.840961 | 6.34E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene85940 | 0.857189 | 1.93E-62 | -1.69E-46 |
| MS.gene061171 | MS.gene85940 | 0.801118 | 1.05E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85940.t1 | MTR_2g104550 | 92.429 | 317 | 14 | 4 | 100 | 408 | 1 | 315 | 0.0 | 565 |
| MS.gene85940.t1 | MTR_2g104490 | 79.288 | 309 | 56 | 6 | 100 | 403 | 1 | 306 | 1.12e-166 | 469 |
| MS.gene85940.t1 | MTR_2g104490 | 79.310 | 290 | 52 | 6 | 100 | 384 | 1 | 287 | 1.79e-155 | 441 |
| MS.gene85940.t1 | MTR_4g009540 | 45.714 | 350 | 125 | 14 | 100 | 404 | 1 | 330 | 1.04e-78 | 246 |
| MS.gene85940.t1 | MTR_4g009110 | 44.134 | 358 | 138 | 11 | 100 | 404 | 1 | 349 | 9.81e-76 | 239 |
| MS.gene85940.t1 | MTR_4g009540 | 44.545 | 330 | 118 | 14 | 100 | 384 | 1 | 310 | 2.41e-68 | 219 |
| MS.gene85940.t1 | MTR_2g104500 | 45.105 | 286 | 132 | 10 | 122 | 404 | 8 | 271 | 5.19e-64 | 206 |
| MS.gene85940.t1 | MTR_8g009020 | 48.571 | 245 | 110 | 5 | 176 | 407 | 84 | 325 | 6.64e-59 | 195 |
| MS.gene85940.t1 | MTR_2g104530 | 43.448 | 290 | 131 | 10 | 124 | 405 | 10 | 274 | 1.45e-56 | 187 |
| MS.gene85940.t1 | MTR_5g014520 | 45.455 | 231 | 108 | 4 | 181 | 400 | 102 | 325 | 2.80e-51 | 175 |
| MS.gene85940.t1 | MTR_5g014600 | 40.940 | 298 | 141 | 11 | 141 | 404 | 38 | 334 | 2.99e-51 | 175 |
| MS.gene85940.t1 | MTR_7g080780 | 37.572 | 346 | 157 | 9 | 100 | 404 | 1 | 328 | 1.79e-48 | 168 |
| MS.gene85940.t1 | MTR_7g080780 | 38.245 | 319 | 141 | 7 | 127 | 404 | 12 | 315 | 3.63e-48 | 167 |
| MS.gene85940.t1 | MTR_8g009010 | 38.305 | 295 | 123 | 8 | 131 | 402 | 11 | 269 | 4.26e-48 | 166 |
| MS.gene85940.t1 | MTR_8g069740 | 41.901 | 284 | 133 | 11 | 119 | 386 | 1 | 268 | 2.20e-47 | 163 |
| MS.gene85940.t1 | MTR_2g104560 | 46.000 | 200 | 97 | 4 | 214 | 406 | 31 | 226 | 2.16e-46 | 159 |
| MS.gene85940.t1 | MTR_4g097940 | 47.594 | 187 | 95 | 3 | 220 | 403 | 138 | 324 | 1.48e-44 | 157 |
| MS.gene85940.t1 | MTR_0250s0040 | 44.330 | 194 | 103 | 4 | 220 | 408 | 71 | 264 | 2.17e-43 | 152 |
| MS.gene85940.t1 | MTR_4g066460 | 37.786 | 262 | 145 | 5 | 158 | 408 | 74 | 328 | 6.53e-43 | 153 |
| MS.gene85940.t1 | MTR_2g104650 | 35.690 | 297 | 147 | 9 | 119 | 402 | 1 | 266 | 9.66e-43 | 151 |
| MS.gene85940.t1 | MTR_2g010450 | 48.851 | 174 | 83 | 3 | 233 | 400 | 173 | 346 | 3.12e-42 | 152 |
| MS.gene85940.t1 | MTR_4g067010 | 39.044 | 251 | 132 | 6 | 158 | 404 | 83 | 316 | 3.19e-42 | 151 |
| MS.gene85940.t1 | MTR_4g092700 | 47.674 | 172 | 85 | 3 | 237 | 403 | 158 | 329 | 5.90e-42 | 150 |
| MS.gene85940.t1 | MTR_0246s0020 | 39.922 | 258 | 124 | 6 | 181 | 408 | 122 | 378 | 7.41e-42 | 152 |
| MS.gene85940.t1 | MTR_6g047570 | 41.538 | 260 | 132 | 11 | 158 | 408 | 87 | 335 | 3.59e-41 | 149 |
| MS.gene85940.t1 | MTR_5g014560 | 34.756 | 328 | 155 | 10 | 95 | 404 | 17 | 303 | 9.94e-41 | 147 |
| MS.gene85940.t1 | MTR_4g097920 | 45.078 | 193 | 91 | 4 | 220 | 403 | 123 | 309 | 1.36e-40 | 146 |
| MS.gene85940.t1 | MTR_4g097920 | 45.078 | 193 | 91 | 4 | 220 | 403 | 138 | 324 | 2.11e-40 | 146 |
| MS.gene85940.t1 | MTR_0011s0210 | 45.763 | 177 | 91 | 3 | 237 | 408 | 183 | 359 | 4.81e-40 | 146 |
| MS.gene85940.t1 | MTR_0011s0260 | 45.763 | 177 | 91 | 3 | 237 | 408 | 183 | 359 | 6.97e-40 | 146 |
| MS.gene85940.t1 | MTR_7g451650 | 47.222 | 180 | 79 | 4 | 227 | 400 | 23 | 192 | 1.14e-39 | 140 |
| MS.gene85940.t1 | MTR_2g104590 | 43.548 | 186 | 76 | 4 | 225 | 402 | 57 | 221 | 6.65e-38 | 137 |
| MS.gene85940.t1 | MTR_5g014640 | 37.190 | 242 | 141 | 5 | 169 | 404 | 87 | 323 | 7.67e-38 | 139 |
| MS.gene85940.t1 | MTR_7g050350 | 52.143 | 140 | 52 | 3 | 266 | 400 | 1 | 130 | 2.16e-37 | 132 |
| MS.gene85940.t1 | MTR_7g451650 | 52.143 | 140 | 52 | 3 | 266 | 400 | 1 | 130 | 2.16e-37 | 132 |
| MS.gene85940.t1 | MTR_4g066380 | 37.903 | 248 | 145 | 3 | 158 | 404 | 82 | 321 | 1.02e-36 | 137 |
| MS.gene85940.t1 | MTR_4g097950 | 38.174 | 241 | 135 | 3 | 179 | 406 | 12 | 251 | 8.81e-36 | 132 |
| MS.gene85940.t1 | MTR_0246s0020 | 39.669 | 242 | 115 | 6 | 181 | 392 | 122 | 362 | 1.19e-35 | 135 |
| MS.gene85940.t1 | MTR_0246s0050 | 36.190 | 210 | 116 | 3 | 204 | 408 | 124 | 320 | 2.21e-35 | 133 |
| MS.gene85940.t1 | MTR_4g098035 | 36.190 | 210 | 116 | 3 | 204 | 408 | 145 | 341 | 4.30e-35 | 132 |
| MS.gene85940.t1 | MTR_4g009420 | 50.694 | 144 | 52 | 3 | 260 | 400 | 65 | 192 | 5.04e-35 | 128 |
| MS.gene85940.t1 | MTR_4g009510 | 46.914 | 162 | 69 | 5 | 248 | 403 | 53 | 203 | 5.03e-34 | 126 |
| MS.gene85940.t1 | MTR_7g451650 | 50.000 | 134 | 52 | 3 | 260 | 388 | 57 | 180 | 2.33e-30 | 115 |
| MS.gene85940.t1 | MTR_4g009420 | 46.512 | 129 | 56 | 2 | 260 | 388 | 65 | 180 | 1.14e-25 | 103 |
| MS.gene85940.t1 | MTR_5g014550 | 40.000 | 125 | 64 | 3 | 267 | 383 | 54 | 175 | 9.10e-17 | 78.6 |
| MS.gene85940.t1 | MTR_6g047550 | 58.209 | 67 | 27 | 1 | 237 | 302 | 173 | 239 | 1.63e-16 | 79.7 |
| MS.gene85940.t1 | MTR_1g072320 | 25.221 | 226 | 141 | 7 | 202 | 403 | 431 | 652 | 1.25e-14 | 76.3 |
| MS.gene85940.t1 | MTR_8g024790 | 25.110 | 227 | 128 | 7 | 150 | 368 | 236 | 428 | 1.70e-14 | 75.5 |
| MS.gene85940.t1 | MTR_8g067280 | 25.692 | 253 | 155 | 6 | 145 | 368 | 361 | 609 | 1.34e-13 | 72.8 |
| MS.gene85940.t1 | MTR_5g030430 | 26.609 | 233 | 139 | 6 | 166 | 368 | 410 | 640 | 1.35e-13 | 73.2 |
| MS.gene85940.t1 | MTR_7g117670 | 30.827 | 133 | 89 | 2 | 236 | 368 | 401 | 530 | 2.20e-13 | 72.0 |
| MS.gene85940.t1 | MTR_8g027495 | 35.780 | 109 | 63 | 3 | 236 | 342 | 457 | 560 | 3.28e-13 | 71.6 |
| MS.gene85940.t1 | MTR_7g096350 | 28.994 | 169 | 97 | 4 | 129 | 293 | 263 | 412 | 1.54e-11 | 66.2 |
| MS.gene85940.t1 | MTR_1g112680 | 36.283 | 113 | 65 | 2 | 189 | 299 | 272 | 379 | 1.75e-11 | 66.2 |
| MS.gene85940.t1 | MTR_8g074010 | 84.848 | 33 | 5 | 0 | 13 | 45 | 65 | 97 | 1.92e-11 | 65.9 |
| MS.gene85940.t1 | MTR_8g024770 | 23.563 | 174 | 121 | 5 | 205 | 368 | 248 | 419 | 2.18e-11 | 65.9 |
| MS.gene85940.t1 | MTR_8g098275 | 23.737 | 198 | 120 | 3 | 236 | 402 | 400 | 597 | 4.19e-11 | 65.1 |
| MS.gene85940.t1 | MTR_8g098275 | 23.737 | 198 | 120 | 3 | 236 | 402 | 243 | 440 | 5.89e-11 | 64.3 |
| MS.gene85940.t1 | MTR_8g098275 | 23.737 | 198 | 120 | 3 | 236 | 402 | 307 | 504 | 7.17e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85940.t1 | AT4G37850 | 34.579 | 321 | 177 | 9 | 105 | 406 | 21 | 327 | 1.99e-44 | 157 |
| MS.gene85940.t1 | AT4G37850 | 34.579 | 321 | 177 | 9 | 105 | 406 | 21 | 327 | 1.99e-44 | 157 |
| MS.gene85940.t1 | AT2G22760 | 42.473 | 186 | 96 | 4 | 229 | 404 | 111 | 295 | 1.11e-37 | 138 |
| MS.gene85940.t1 | AT2G22750 | 37.657 | 239 | 127 | 6 | 177 | 399 | 65 | 297 | 1.42e-34 | 130 |
| MS.gene85940.t1 | AT2G22750 | 37.657 | 239 | 127 | 6 | 177 | 399 | 89 | 321 | 1.71e-34 | 130 |
| MS.gene85940.t1 | AT2G22750 | 37.657 | 239 | 127 | 6 | 177 | 399 | 93 | 325 | 1.99e-34 | 130 |
| MS.gene85940.t1 | AT2G22760 | 44.242 | 165 | 82 | 3 | 229 | 384 | 111 | 274 | 3.97e-34 | 129 |
| MS.gene85940.t1 | AT2G22750 | 37.657 | 239 | 126 | 7 | 177 | 399 | 65 | 296 | 3.71e-33 | 126 |
| MS.gene85940.t1 | AT2G22750 | 37.657 | 239 | 126 | 7 | 177 | 399 | 93 | 324 | 4.44e-33 | 127 |
| MS.gene85940.t1 | AT2G22770 | 36.161 | 224 | 108 | 4 | 215 | 403 | 95 | 318 | 1.99e-31 | 122 |
| MS.gene85940.t1 | AT4G09820 | 36.691 | 139 | 73 | 2 | 227 | 365 | 353 | 476 | 5.03e-18 | 86.3 |
| MS.gene85940.t1 | AT4G17880 | 27.830 | 212 | 142 | 5 | 162 | 368 | 347 | 552 | 2.40e-16 | 81.3 |
| MS.gene85940.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 233 | 363 | 124 | 261 | 1.32e-14 | 74.3 |
| MS.gene85940.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 233 | 363 | 175 | 312 | 2.07e-14 | 74.3 |
| MS.gene85940.t1 | AT5G46760 | 26.446 | 242 | 159 | 6 | 140 | 368 | 320 | 555 | 3.31e-14 | 74.7 |
| MS.gene85940.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 233 | 363 | 124 | 261 | 3.58e-14 | 73.2 |
| MS.gene85940.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 233 | 363 | 175 | 312 | 4.26e-14 | 73.6 |
| MS.gene85940.t1 | AT2G46510 | 27.219 | 169 | 108 | 3 | 220 | 387 | 377 | 531 | 7.20e-14 | 73.6 |
| MS.gene85940.t1 | AT1G32640 | 28.662 | 157 | 103 | 4 | 220 | 368 | 434 | 589 | 1.33e-13 | 73.2 |
| MS.gene85940.t1 | AT1G63650 | 30.667 | 150 | 77 | 5 | 237 | 361 | 405 | 552 | 1.61e-12 | 69.7 |
| MS.gene85940.t1 | AT1G63650 | 30.667 | 150 | 77 | 5 | 237 | 361 | 405 | 552 | 1.61e-12 | 69.7 |
| MS.gene85940.t1 | AT1G63650 | 30.667 | 150 | 77 | 5 | 237 | 361 | 405 | 552 | 1.61e-12 | 69.7 |
| MS.gene85940.t1 | AT1G12860 | 28.962 | 183 | 107 | 6 | 238 | 405 | 268 | 442 | 1.75e-11 | 66.2 |
| MS.gene85940.t1 | AT1G12860 | 31.169 | 154 | 87 | 5 | 238 | 376 | 268 | 417 | 2.36e-11 | 65.5 |
| MS.gene85940.t1 | AT1G01260 | 39.437 | 71 | 42 | 1 | 226 | 295 | 421 | 491 | 2.81e-11 | 65.9 |
| MS.gene85940.t1 | AT1G01260 | 39.437 | 71 | 42 | 1 | 226 | 295 | 421 | 491 | 2.81e-11 | 65.9 |
| MS.gene85940.t1 | AT1G01260 | 39.437 | 71 | 42 | 1 | 226 | 295 | 421 | 491 | 2.81e-11 | 65.9 |
| MS.gene85940.t1 | AT4G16430 | 38.667 | 75 | 45 | 1 | 217 | 290 | 299 | 373 | 9.70e-11 | 63.9 |
Find 84 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACTTCTTGTTCTGATTC+TGG | 0.178025 | 2.1:+1239078 | None:intergenic |
| CAGCAACCTGTTACATATTC+TGG | 0.210205 | 2.1:-1239240 | MS.gene85940:CDS |
| CTACTTCTACTCTTTGTTCT+TGG | 0.252338 | 2.1:+1239057 | None:intergenic |
| GCCAGCAGTGTATTTCCTTT+TGG | 0.257466 | 2.1:-1236844 | MS.gene85940:CDS |
| TGGAGCAATCATGGGAAAAT+TGG | 0.268938 | 2.1:-1239534 | MS.gene85940:CDS |
| ACATTATGGCAGAGAGAAAA+AGG | 0.316242 | 2.1:-1238951 | MS.gene85940:CDS |
| GCACTTTCAGCTACTATTCC+TGG | 0.324686 | 2.1:-1238901 | MS.gene85940:CDS |
| TGTAGTAGTAGCTGGTATTA+TGG | 0.362086 | 2.1:+1239101 | None:intergenic |
| TAGAAGTGGTTCTCAGTGTT+TGG | 0.364117 | 2.1:-1238977 | MS.gene85940:CDS |
| GGCGGAGGTGGAATGGAGTA+TGG | 0.367100 | 2.1:-1240895 | MS.gene85940:CDS |
| ATCCACTGTGAGAAGGAAAA+TGG | 0.369029 | 2.1:-1236919 | MS.gene85940:CDS |
| AATACTCTTGCTTTAACATC+AGG | 0.372630 | 2.1:+1236964 | None:intergenic |
| TTCTTCTCATGGAGCAATCA+TGG | 0.379874 | 2.1:-1239543 | MS.gene85940:CDS |
| GAGTATGGAGAAAGCGGTTA+TGG | 0.380014 | 2.1:-1240880 | MS.gene85940:CDS |
| AAGTAGTAATAAGAGGAGTT+TGG | 0.386060 | 2.1:-1239040 | MS.gene85940:CDS |
| TCAGTGTTTGGATCACATTA+TGG | 0.401190 | 2.1:-1238965 | MS.gene85940:CDS |
| TGGCTTCACTATTGTTGCTC+AGG | 0.404693 | 2.1:-1236809 | MS.gene85940:intron |
| CTGCTTCCAGAATATGTAAC+AGG | 0.405610 | 2.1:+1239234 | None:intergenic |
| CTCTACAACTGGCGTGGATC+CGG | 0.407304 | 2.1:-1241211 | MS.gene85940:intron |
| GGAAAATTGGCCTCTTCATT+CGG | 0.420212 | 2.1:-1239521 | MS.gene85940:intron |
| AGAGTAGAAGTAGTAATAAG+AGG | 0.424376 | 2.1:-1239047 | MS.gene85940:CDS |
| CGTGTCTTCAATTTCGTCGT+TGG | 0.430430 | 2.1:-1241280 | MS.gene85940:CDS |
| GATGCAAGCGGAGGCGGAGG+TGG | 0.453917 | 2.1:-1240907 | MS.gene85940:CDS |
| AGAGCTCTGATTGGTCTTTG+AGG | 0.460849 | 2.1:+1241230 | None:intergenic |
| TGGAGAGATGCAAGCGGAGG+CGG | 0.464129 | 2.1:-1240913 | MS.gene85940:CDS |
| TGAAGATGAAAGAGAAAGGA+AGG | 0.464475 | 2.1:-1240939 | MS.gene85940:intron |
| TTCTACTCTTCTTTCCACTT+TGG | 0.465419 | 2.1:+1238995 | None:intergenic |
| GATTCTGGTGTAGTAGTAGC+TGG | 0.465607 | 2.1:+1239093 | None:intergenic |
| ATTATTACCTTCTTCAAGCC+AGG | 0.465921 | 2.1:+1238883 | None:intergenic |
| AGAACGTGTGAAGGAGTTAG+AGG | 0.469057 | 2.1:-1237088 | MS.gene85940:CDS |
| TTAACATCAGGGAGTGATGA+TGG | 0.473088 | 2.1:+1236976 | None:intergenic |
| AAGGAGAGAATGAATGTCCT+TGG | 0.473742 | 2.1:+1239135 | None:intergenic |
| CTGTGATGTGTCGACTTCAC+TGG | 0.474191 | 2.1:+1239579 | None:intergenic |
| AAATGACACAAATTCTGATC+AGG | 0.480808 | 2.1:-1237010 | MS.gene85940:CDS |
| TGAAAGAGAAAGGAAGGTGG+TGG | 0.486413 | 2.1:-1240933 | MS.gene85940:intron |
| GAAGCTGAGGTTGAATTTGA+TGG | 0.488555 | 2.1:-1240842 | MS.gene85940:intron |
| TTTATCATCTTCTAGTGAGA+TGG | 0.493845 | 2.1:-1239211 | MS.gene85940:CDS |
| ACCAATCAGAGCTCTACAAC+TGG | 0.495623 | 2.1:-1241222 | MS.gene85940:CDS |
| GATTGCTTCACCAAGTATAG+AGG | 0.505445 | 2.1:+1237131 | None:intergenic |
| TATTCAAAAGCACTTGCTGT+AGG | 0.506889 | 2.1:+1235967 | None:intergenic |
| GCGGTTATGGAGAGAAGAAG+AGG | 0.510006 | 2.1:-1240867 | MS.gene85940:CDS |
| TGATGTTAAAGCAAGAGTAT+TGG | 0.512297 | 2.1:-1236962 | MS.gene85940:CDS |
| AGAAGAAGAGGATGAAGCTG+AGG | 0.513087 | 2.1:-1240855 | MS.gene85940:CDS |
| TACTATTCCTGGCTTGAAGA+AGG | 0.517604 | 2.1:-1238890 | MS.gene85940:intron |
| CAATATGAAGGTGAATGATC+TGG | 0.521092 | 2.1:-1235997 | MS.gene85940:CDS |
| CCAAGAGTTGAATTCCCAAA+AGG | 0.521924 | 2.1:+1236829 | None:intergenic |
| TCTTCTCATGGAGCAATCAT+GGG | 0.526288 | 2.1:-1239542 | MS.gene85940:CDS |
| AGAGATGCAAGCGGAGGCGG+AGG | 0.531950 | 2.1:-1240910 | MS.gene85940:CDS |
| ATGGACGGCTCAGATAGCTC+AGG | 0.532196 | 2.1:-1239192 | MS.gene85940:CDS |
| ATTCAAAAGCACTTGCTGTA+GGG | 0.533965 | 2.1:+1235968 | None:intergenic |
| AAGCGGAGGCGGAGGTGGAA+TGG | 0.535725 | 2.1:-1240902 | MS.gene85940:CDS |
| CCCAAAAGGAAATACACTGC+TGG | 0.556531 | 2.1:+1236843 | None:intergenic |
| CGCGACGGTTAGCGTCTGAC+CGG | 0.561447 | 2.1:+1241318 | None:intergenic |
| ATGGACAAGACCTCTATACT+TGG | 0.562754 | 2.1:-1237141 | MS.gene85940:CDS |
| AGTGGAAAGAAGAGTAGAAG+TGG | 0.563816 | 2.1:-1238991 | MS.gene85940:CDS |
| GCCAGTTGTAGAGCTCTGAT+TGG | 0.572159 | 2.1:+1241221 | None:intergenic |
| GCAAAAGCTAGTAACCAAAG+TGG | 0.590525 | 2.1:-1239009 | MS.gene85940:CDS |
| GGAATGGAGTATGGAGAAAG+CGG | 0.590978 | 2.1:-1240886 | MS.gene85940:CDS |
| GGAGTGGACGGTGTTGATGA+AGG | 0.594219 | 2.1:+1239156 | None:intergenic |
| GGGTGACGGGTACAATATGA+AGG | 0.596531 | 2.1:-1236009 | MS.gene85940:CDS |
| AAGCTTCCGACGATGCTCAC+CGG | 0.597987 | 2.1:-1241337 | None:intergenic |
| GTTGATGTAGAGAATATGCA+AGG | 0.598569 | 2.1:-1239324 | MS.gene85940:CDS |
| AGTTAGAGGAACGGAACAAG+AGG | 0.599418 | 2.1:-1237074 | MS.gene85940:CDS |
| CATTGAGATCCACTGTGAGA+AGG | 0.599535 | 2.1:-1236926 | MS.gene85940:CDS |
| GAGAATGAATGTCCTTGGAG+TGG | 0.602643 | 2.1:+1239140 | None:intergenic |
| ATGACTTGCAGATGGGTGAC+GGG | 0.609894 | 2.1:-1236022 | MS.gene85940:intron |
| ATACTCTTGCTTTAACATCA+GGG | 0.612633 | 2.1:+1236965 | None:intergenic |
| TCAGAGCTCTACAACTGGCG+TGG | 0.615515 | 2.1:-1241217 | MS.gene85940:CDS |
| AGTGTTATTACCGAATGAAG+AGG | 0.617526 | 2.1:+1239511 | None:intergenic |
| CATCAACACCGTCCACTCCA+AGG | 0.620000 | 2.1:-1239152 | MS.gene85940:CDS |
| ATGAATGTCCTTGGAGTGGA+CGG | 0.625719 | 2.1:+1239144 | None:intergenic |
| GCTCTGATTGGTCTTTGAGG+AGG | 0.628633 | 2.1:+1241233 | None:intergenic |
| TCATCTTCTAGTGAGATGGA+CGG | 0.629400 | 2.1:-1239207 | MS.gene85940:CDS |
| GAAATTGAAGACACGATCTG+AGG | 0.630246 | 2.1:+1241288 | None:intergenic |
| GATGACTTGCAGATGGGTGA+CGG | 0.630595 | 2.1:-1236023 | MS.gene85940:intron |
| TATTATGGTAGATTTATCAA+AGG | 0.640354 | 2.1:+1239116 | None:intergenic |
| ACTACTTCAAGAACGTGTGA+AGG | 0.641075 | 2.1:-1237097 | MS.gene85940:CDS |
| AGATGAAAGAGAAAGGAAGG+TGG | 0.641265 | 2.1:-1240936 | MS.gene85940:intron |
| TGGTGGAGAGATGCAAGCGG+AGG | 0.655819 | 2.1:-1240916 | MS.gene85940:CDS |
| ATCTGAGGATGATGTCGCGA+CGG | 0.658777 | 2.1:+1241303 | None:intergenic |
| AGGTGGTGGAGAGATGCAAG+CGG | 0.664144 | 2.1:-1240919 | MS.gene85940:CDS |
| TGGACGGCTCAGATAGCTCA+GGG | 0.674267 | 2.1:-1239191 | MS.gene85940:CDS |
| GTGTGAAGGAGTTAGAGGAA+CGG | 0.690708 | 2.1:-1237083 | MS.gene85940:CDS |
| TTGATGTAGAGAATATGCAA+GGG | 0.725229 | 2.1:-1239323 | MS.gene85940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTACATAGAAAAATTA+GGG | - | chr2.1:1236262-1236281 | MS.gene85940:intron | 10.0% |
| !! | AATGATATTTAATAATTAGA+TGG | + | chr2.1:1240571-1240590 | None:intergenic | 10.0% |
| !! | ATGATATTTAATAATTAGAT+GGG | + | chr2.1:1240570-1240589 | None:intergenic | 10.0% |
| !! | TGTTTACTAAAAATAAATAA+AGG | - | chr2.1:1239746-1239765 | MS.gene85940:intron | 10.0% |
| !! | TTAATTCAAAAATTAAATCA+GGG | + | chr2.1:1237913-1237932 | None:intergenic | 10.0% |
| !! | TTATTGAATTAATAAATTTC+TGG | + | chr2.1:1236214-1236233 | None:intergenic | 10.0% |
| !! | TTTAACGATAAATATATTTA+GGG | + | chr2.1:1240674-1240693 | None:intergenic | 10.0% |
| !!! | AAAAACAATATATTTACTTT+TGG | - | chr2.1:1239961-1239980 | MS.gene85940:intron | 10.0% |
| !!! | TTTTAACGATAAATATATTT+AGG | + | chr2.1:1240675-1240694 | None:intergenic | 10.0% |
| !! | AAAAACAATTATTGTAATTG+TGG | + | chr2.1:1237514-1237533 | None:intergenic | 15.0% |
| !! | GAAAATTACATAGAAAAATT+AGG | - | chr2.1:1236261-1236280 | MS.gene85940:intron | 15.0% |
| !! | GTTAATTCAAAAATTAAATC+AGG | + | chr2.1:1237914-1237933 | None:intergenic | 15.0% |
| !! | TACTAAAAATAAATAAAGGA+TGG | - | chr2.1:1239750-1239769 | MS.gene85940:intron | 15.0% |
| !! | TCAAATGATTAATAATTACA+GGG | - | chr2.1:1236815-1236834 | MS.gene85940:CDS | 15.0% |
| !! | TGCATAAATTAATTAATAGA+TGG | - | chr2.1:1240121-1240140 | MS.gene85940:intron | 15.0% |
| !! | TTAACTGTTATTATTACAAT+AGG | - | chr2.1:1237929-1237948 | MS.gene85940:intron | 15.0% |
| !!! | ATTATTAATCATTTGAGTTT+TGG | + | chr2.1:1236811-1236830 | None:intergenic | 15.0% |
| !!! | CTAAAACAAATTTTTAAATG+AGG | + | chr2.1:1240792-1240811 | None:intergenic | 15.0% |
| !!! | GAATAATTTTGTTTTTTTGA+AGG | - | chr2.1:1239522-1239541 | MS.gene85940:CDS | 15.0% |
| !!! | GTGATTTTCTTAATTATTAA+TGG | + | chr2.1:1239149-1239168 | None:intergenic | 15.0% |
| !!! | TAATAACACAAATACAATTT+TGG | + | chr2.1:1238627-1238646 | None:intergenic | 15.0% |
| !! | AAACAAGAAAAAAAATCCTT+AGG | - | chr2.1:1236594-1236613 | MS.gene85940:intron | 20.0% |
| !! | AATAAAAATTGATGTTCTGT+CGG | - | chr2.1:1239616-1239635 | MS.gene85940:intron | 20.0% |
| !! | AATCTATTCTATTCTATTTC+AGG | - | chr2.1:1236565-1236584 | MS.gene85940:intron | 20.0% |
| !! | AATTTAGTATAACTATGTGT+TGG | - | chr2.1:1239191-1239210 | MS.gene85940:CDS | 20.0% |
| !! | ATAAATGCAATGTATCATAA+TGG | + | chr2.1:1237591-1237610 | None:intergenic | 20.0% |
| !! | ATACTCTATATTATTACAAG+TGG | - | chr2.1:1239473-1239492 | MS.gene85940:intron | 20.0% |
| !! | CTCAAATGATTAATAATTAC+AGG | - | chr2.1:1236814-1236833 | MS.gene85940:CDS | 20.0% |
| !! | TAGATAGTATAATAGGAATT+GGG | - | chr2.1:1236523-1236542 | MS.gene85940:intron | 20.0% |
| !! | TATTATGGTAGATTTATCAA+AGG | + | chr2.1:1238168-1238187 | None:intergenic | 20.0% |
| !! | TATTTAATAATTAGATGGGA+TGG | + | chr2.1:1240566-1240585 | None:intergenic | 20.0% |
| !! | TTAGATAGTATAATAGGAAT+TGG | - | chr2.1:1236522-1236541 | MS.gene85940:intron | 20.0% |
| !! | TTATCAAATAACCTAGAAAT+TGG | - | chr2.1:1238508-1238527 | MS.gene85940:intron | 20.0% |
| !! | TTGTTGATCATAATGATTTA+CGG | + | chr2.1:1237853-1237872 | None:intergenic | 20.0% |
| !!! | ATATTGACTTCTTTTCTTTT+GGG | - | chr2.1:1239993-1240012 | MS.gene85940:intron | 20.0% |
| !!! | TTTTTTTTTTTCACTACGTA+TGG | + | chr2.1:1239588-1239607 | None:intergenic | 20.0% |
| ! | AAGAAAAAAAATCCTTAGGA+AGG | - | chr2.1:1236598-1236617 | MS.gene85940:intron | 25.0% |
| ! | AAGTAAAACAACATCAAACT+TGG | - | chr2.1:1239837-1239856 | MS.gene85940:intron | 25.0% |
| ! | ATTAAAGTATGCTTTCAACA+AGG | - | chr2.1:1241142-1241161 | MS.gene85940:intron | 25.0% |
| ! | CAAGTTGTTTAAAAGTTCTT+CGG | + | chr2.1:1241014-1241033 | None:intergenic | 25.0% |
| ! | CAATGGAATGCATATTTAAA+GGG | + | chr2.1:1236918-1236937 | None:intergenic | 25.0% |
| ! | CTTGATTAGTACTAGTAATT+TGG | + | chr2.1:1236983-1237002 | None:intergenic | 25.0% |
| ! | GTTATTATTACAATAGGAAG+TGG | - | chr2.1:1237935-1237954 | MS.gene85940:intron | 25.0% |
| ! | TAAGACAACAAAACAAACAA+TGG | - | chr2.1:1239802-1239821 | MS.gene85940:intron | 25.0% |
| ! | TAGAAATTGGAAATTCACTT+GGG | - | chr2.1:1238521-1238540 | MS.gene85940:intron | 25.0% |
| ! | TCAAATGGTCTATAATTACA+GGG | - | chr2.1:1236875-1236894 | MS.gene85940:CDS | 25.0% |
| ! | TCTTGAATTGGATTTGAATA+TGG | + | chr2.1:1239411-1239430 | None:intergenic | 25.0% |
| ! | TGCAACTTAGATAGTATAAT+AGG | - | chr2.1:1236516-1236535 | MS.gene85940:intron | 25.0% |
| ! | TTCAAATGGTCTATAATTAC+AGG | - | chr2.1:1236874-1236893 | MS.gene85940:CDS | 25.0% |
| ! | TTTATTATGAACTCAGAGTT+TGG | - | chr2.1:1239053-1239072 | MS.gene85940:CDS | 25.0% |
| !! | AAAGTACTCTAAATCATAGT+AGG | + | chr2.1:1240833-1240852 | None:intergenic | 25.0% |
| !! | AATTTTTGTTCCTTTCACTT+TGG | - | chr2.1:1236179-1236198 | MS.gene85940:intron | 25.0% |
| !! | ATGATTTAGATCAATTTTGC+TGG | + | chr2.1:1236241-1236260 | None:intergenic | 25.0% |
| !! | TACTAAAATGTCCTTTTACA+TGG | + | chr2.1:1238707-1238726 | None:intergenic | 25.0% |
| !!! | CTCATGATCAACTTATTTTT+AGG | + | chr2.1:1240910-1240929 | None:intergenic | 25.0% |
| !!! | GATATTGACTTCTTTTCTTT+TGG | - | chr2.1:1239992-1240011 | MS.gene85940:intron | 25.0% |
| AAAAATGTCGAGAAAGAAGA+AGG | - | chr2.1:1236631-1236650 | MS.gene85940:intron | 30.0% | |
| AAATGACACAAATTCTGATC+AGG | - | chr2.1:1240271-1240290 | MS.gene85940:intron | 30.0% | |
| AAGTAGTAATAAGAGGAGTT+TGG | - | chr2.1:1238241-1238260 | MS.gene85940:intron | 30.0% | |
| AATAATTACAGGGACAAGAT+GGG | - | chr2.1:1236825-1236844 | MS.gene85940:CDS | 30.0% | |
| AATACTCTTGCTTTAACATC+AGG | + | chr2.1:1240320-1240339 | None:intergenic | 30.0% | |
| AGAGTAGAAGTAGTAATAAG+AGG | - | chr2.1:1238234-1238253 | MS.gene85940:intron | 30.0% | |
| AGATTGAAGATGAAAGAGAA+AGG | - | chr2.1:1236338-1236357 | MS.gene85940:intron | 30.0% | |
| AGATTTGGATTCTCTTGAAT+TGG | + | chr2.1:1239423-1239442 | None:intergenic | 30.0% | |
| ATACTCTTGCTTTAACATCA+GGG | + | chr2.1:1240319-1240338 | None:intergenic | 30.0% | |
| ATGTGAAAGATAGTGTTTGA+TGG | - | chr2.1:1238738-1238757 | MS.gene85940:intron | 30.0% | |
| CAAGTGAATTTCCAATTTCT+AGG | + | chr2.1:1238522-1238541 | None:intergenic | 30.0% | |
| CACATTGTATAATGCTATAC+CGG | - | chr2.1:1237451-1237470 | MS.gene85940:intron | 30.0% | |
| CAGTCGAAAGTAATTAATGT+TGG | - | chr2.1:1237617-1237636 | MS.gene85940:intron | 30.0% | |
| CATTATACACACCATGTAAA+AGG | - | chr2.1:1238693-1238712 | MS.gene85940:intron | 30.0% | |
| CATTCTCTTTCTAATTGAAC+TGG | - | chr2.1:1240587-1240606 | MS.gene85940:intron | 30.0% | |
| CCAATGGAATGCATATTTAA+AGG | + | chr2.1:1236919-1236938 | None:intergenic | 30.0% | |
| CCTTTAAATATGCATTCCAT+TGG | - | chr2.1:1236916-1236935 | MS.gene85940:CDS | 30.0% | |
| CTAGAAATTGGAAATTCACT+TGG | - | chr2.1:1238520-1238539 | MS.gene85940:intron | 30.0% | |
| CTCTCTATCACTATAAGATT+TGG | + | chr2.1:1239438-1239457 | None:intergenic | 30.0% | |
| GATACTTATAGTAGTAGTTG+AGG | + | chr2.1:1240076-1240095 | None:intergenic | 30.0% | |
| GCTAATAGTATTACAACTGA+GGG | - | chr2.1:1241088-1241107 | MS.gene85940:intron | 30.0% | |
| GGTATAGCATTATACAATGT+GGG | + | chr2.1:1237452-1237471 | None:intergenic | 30.0% | |
| GTACTTGAAAACTAACAAAC+AGG | - | chr2.1:1241066-1241085 | MS.gene85940:intron | 30.0% | |
| GTATAATAGGAATTGGGAAA+TGG | - | chr2.1:1236529-1236548 | MS.gene85940:intron | 30.0% | |
| GTCGCTAATTAAATGTGTTT+AGG | - | chr2.1:1236784-1236803 | MS.gene85940:intron | 30.0% | |
| TAATAATTACAGGGACAAGA+TGG | - | chr2.1:1236824-1236843 | MS.gene85940:CDS | 30.0% | |
| TACATAGAAAAATTAGGGTG+AGG | - | chr2.1:1236267-1236286 | MS.gene85940:intron | 30.0% | |
| TATATGTTGACCATCATAGA+TGG | + | chr2.1:1238824-1238843 | None:intergenic | 30.0% | |
| TATGACATGACATGATTGTA+AGG | - | chr2.1:1241192-1241211 | MS.gene85940:intron | 30.0% | |
| TCATGTCATGTCATATTTCA+TGG | + | chr2.1:1241187-1241206 | None:intergenic | 30.0% | |
| TGTGAAAGATAGTGTTTGAT+GGG | - | chr2.1:1238739-1238758 | MS.gene85940:intron | 30.0% | |
| TGTTCTGATGAGTTATATCT+TGG | + | chr2.1:1239380-1239399 | None:intergenic | 30.0% | |
| TTAGTACTAGTAATTTGGAG+TGG | + | chr2.1:1236978-1236997 | None:intergenic | 30.0% | |
| TTATTACTAGTAACGCAAGT+CGG | + | chr2.1:1237032-1237051 | None:intergenic | 30.0% | |
| TTGATGTAGAGAATATGCAA+GGG | - | chr2.1:1237958-1237977 | MS.gene85940:intron | 30.0% | |
| TTTAGACCTAGAAATGTGTT+GGG | - | chr2.1:1240807-1240826 | MS.gene85940:intron | 30.0% | |
| TTTATCATCTTCTAGTGAGA+TGG | - | chr2.1:1238070-1238089 | MS.gene85940:intron | 30.0% | |
| TTTGTTCTCAGTATCTATGA+AGG | + | chr2.1:1239283-1239302 | None:intergenic | 30.0% | |
| ! | AAGAAAGAAGTGTAGAGAAA+GGG | - | chr2.1:1236665-1236684 | MS.gene85940:intron | 30.0% |
| ! | CAAAACACATTTTCTTCTCA+TGG | - | chr2.1:1237727-1237746 | MS.gene85940:intron | 30.0% |
| ! | CTTTTAAACAACTTGAGAGA+CGG | - | chr2.1:1241019-1241038 | MS.gene85940:intron | 30.0% |
| ! | CTTTTACATGGTGTGTATAA+TGG | + | chr2.1:1238695-1238714 | None:intergenic | 30.0% |
| ! | GTATTGGTAGGAATCTTATA+TGG | + | chr2.1:1237394-1237413 | None:intergenic | 30.0% |
| ! | TAGTACTAGTAATTTGGAGT+GGG | + | chr2.1:1236977-1236996 | None:intergenic | 30.0% |
| ! | TGATGTTAAAGCAAGAGTAT+TGG | - | chr2.1:1240319-1240338 | MS.gene85940:intron | 30.0% |
| ! | TTTTAGACCTAGAAATGTGT+TGG | - | chr2.1:1240806-1240825 | MS.gene85940:intron | 30.0% |
| !! | GTCATTTTAAAGACAAGTAG+TGG | - | chr2.1:1240714-1240733 | MS.gene85940:intron | 30.0% |
| !! | TCTAGAATTTTGTTAGGCTA+TGG | + | chr2.1:1237342-1237361 | None:intergenic | 30.0% |
| !! | TTGTACACAAATCACTTTTG+TGG | + | chr2.1:1240253-1240272 | None:intergenic | 30.0% |
| !!! | GAGACTTCTAGAATTTTGTT+AGG | + | chr2.1:1237348-1237367 | None:intergenic | 30.0% |
| !!! | TGTTGTTTTACTTCTCATCT+TGG | + | chr2.1:1239830-1239849 | None:intergenic | 30.0% |
| !!! | TTTTCAAGTACTCTAAGTCA+TGG | + | chr2.1:1241057-1241076 | None:intergenic | 30.0% |
| AACACATTTAATTAGCGACG+TGG | + | chr2.1:1236783-1236802 | None:intergenic | 35.0% | |
| AAGTCTCTACATCTACATGA+TGG | - | chr2.1:1237361-1237380 | MS.gene85940:intron | 35.0% | |
| ACATTATGGCAGAGAGAAAA+AGG | - | chr2.1:1238330-1238349 | MS.gene85940:intron | 35.0% | |
| AGTTAGCATAAACAAACGAG+TGG | + | chr2.1:1238848-1238867 | None:intergenic | 35.0% | |
| ATACCATGTCTCATCTCAAT+CGG | - | chr2.1:1237410-1237429 | MS.gene85940:intron | 35.0% | |
| ATTATTACCTTCTTCAAGCC+AGG | + | chr2.1:1238401-1238420 | None:intergenic | 35.0% | |
| ATTGAGATGAGACATGGTAT+TGG | + | chr2.1:1237410-1237429 | None:intergenic | 35.0% | |
| CAATATGAAGGTGAATGATC+TGG | - | chr2.1:1241284-1241303 | MS.gene85940:CDS | 35.0% | |
| CATATCACATTTGTGTGTCA+TGG | - | chr2.1:1238783-1238802 | MS.gene85940:intron | 35.0% | |
| CGGTATAGCATTATACAATG+TGG | + | chr2.1:1237453-1237472 | None:intergenic | 35.0% | |
| CTACTTCTACTCTTTGTTCT+TGG | + | chr2.1:1238227-1238246 | None:intergenic | 35.0% | |
| GATGTATCAGACAATAACTC+CGG | + | chr2.1:1240992-1241011 | None:intergenic | 35.0% | |
| GGCTAATAGTATTACAACTG+AGG | - | chr2.1:1241087-1241106 | MS.gene85940:intron | 35.0% | |
| GGTTTCATTAAGGGCAAAAA+TGG | - | chr2.1:1236714-1236733 | MS.gene85940:intron | 35.0% | |
| GTGAAAGATAGTGTTTGATG+GGG | - | chr2.1:1238740-1238759 | MS.gene85940:intron | 35.0% | |
| GTTGATGTAGAGAATATGCA+AGG | - | chr2.1:1237957-1237976 | MS.gene85940:intron | 35.0% | |
| TCACATTCAGATAAACCTCT+AGG | - | chr2.1:1237065-1237084 | MS.gene85940:CDS | 35.0% | |
| TCAGTGTTTGGATCACATTA+TGG | - | chr2.1:1238316-1238335 | MS.gene85940:intron | 35.0% | |
| TGAAGATGAAAGAGAAAGGA+AGG | - | chr2.1:1236342-1236361 | MS.gene85940:intron | 35.0% | |
| TGACACACAAATGTGATATG+TGG | + | chr2.1:1238783-1238802 | None:intergenic | 35.0% | |
| TGGGATAAATAAGCAGATTC+TGG | - | chr2.1:1238540-1238559 | MS.gene85940:intron | 35.0% | |
| TGTAGTAGTAGCTGGTATTA+TGG | + | chr2.1:1238183-1238202 | None:intergenic | 35.0% | |
| TTCTACTCTTCTTTCCACTT+TGG | + | chr2.1:1238289-1238308 | None:intergenic | 35.0% | |
| TTTCTTCTTCTTCCTTCCTA+AGG | + | chr2.1:1236613-1236632 | None:intergenic | 35.0% | |
| ! | AGAAAGAAGTGTAGAGAAAG+GGG | - | chr2.1:1236666-1236685 | MS.gene85940:intron | 35.0% |
| ! | AGCAAGTGCTTTTGAATATG+AGG | - | chr2.1:1241319-1241338 | MS.gene85940:CDS | 35.0% |
| ! | AGTGTTATTACCGAATGAAG+AGG | + | chr2.1:1237773-1237792 | None:intergenic | 35.0% |
| ! | GAAGAAAGAAGTGTAGAGAA+AGG | - | chr2.1:1236664-1236683 | MS.gene85940:intron | 35.0% |
| ! | GACATTTTCTCCAAAGTGAA+AGG | + | chr2.1:1236192-1236211 | None:intergenic | 35.0% |
| ! | TAACATGATGACTTGCAGAT+GGG | - | chr2.1:1241252-1241271 | MS.gene85940:CDS | 35.0% |
| ! | TCTTTAGCTTCACTTAGCTT+AGG | - | chr2.1:1237194-1237213 | MS.gene85940:intron | 35.0% |
| !! | AAAAGCCCATTTTGATCACT+GGG | + | chr2.1:1236140-1236159 | None:intergenic | 35.0% |
| !! | ATTCAAAAGCACTTGCTGTA+GGG | + | chr2.1:1241316-1241335 | None:intergenic | 35.0% |
| !! | TATTCAAAAGCACTTGCTGT+AGG | + | chr2.1:1241317-1241336 | None:intergenic | 35.0% |
| !!! | TTTTTTCACTACGTATGGCA+TGG | + | chr2.1:1239583-1239602 | None:intergenic | 35.0% |
| AAGGAGAGAATGAATGTCCT+TGG | + | chr2.1:1238149-1238168 | None:intergenic | 40.0% | |
| AAGTATGCTTTCAACAAGGC+TGG | - | chr2.1:1241146-1241165 | MS.gene85940:intron | 40.0% | |
| AATGAAGCTAAGGGGGATAA+GGG | + | chr2.1:1237679-1237698 | None:intergenic | 40.0% | |
| ACAGTTACGAAGATGAAGCA+CGG | - | chr2.1:1239094-1239113 | MS.gene85940:CDS | 40.0% | |
| ACTACTTCAAGAACGTGTGA+AGG | - | chr2.1:1240184-1240203 | MS.gene85940:intron | 40.0% | |
| ACTGGATGAATGAAGCTAAG+GGG | + | chr2.1:1237687-1237706 | None:intergenic | 40.0% | |
| AGATGAAAGAGAAAGGAAGG+TGG | - | chr2.1:1236345-1236364 | MS.gene85940:intron | 40.0% | |
| AGCATTATACAATGTGGGTC+AGG | + | chr2.1:1237447-1237466 | None:intergenic | 40.0% | |
| AGTGGAAAGAAGAGTAGAAG+TGG | - | chr2.1:1238290-1238309 | MS.gene85940:intron | 40.0% | |
| AGTTATGCGTGTTCTGATGT+TGG | + | chr2.1:1239247-1239266 | None:intergenic | 40.0% | |
| ATCCACTGTGAGAAGGAAAA+TGG | - | chr2.1:1240362-1240381 | MS.gene85940:intron | 40.0% | |
| ATGGACAAGACCTCTATACT+TGG | - | chr2.1:1240140-1240159 | MS.gene85940:intron | 40.0% | |
| ATTTATCATCGTACGCTCCA+AGG | + | chr2.1:1241115-1241134 | None:intergenic | 40.0% | |
| CAACACCCAGTGATCAAAAT+GGG | - | chr2.1:1236132-1236151 | MS.gene85940:intron | 40.0% | |
| CACTGGATGAATGAAGCTAA+GGG | + | chr2.1:1237688-1237707 | None:intergenic | 40.0% | |
| CAGCAACCTGTTACATATTC+TGG | - | chr2.1:1238041-1238060 | MS.gene85940:intron | 40.0% | |
| CAGTTCGCAGGTTTCATTAA+GGG | - | chr2.1:1236705-1236724 | MS.gene85940:intron | 40.0% | |
| CATCTGCAAGTCATCATGTT+AGG | + | chr2.1:1241253-1241272 | None:intergenic | 40.0% | |
| CCAAGAGTTGAATTCCCAAA+AGG | + | chr2.1:1240455-1240474 | None:intergenic | 40.0% | |
| CGACCAATTGTTTGGCAATA+CGG | - | chr2.1:1237487-1237506 | MS.gene85940:intron | 40.0% | |
| CGTATTGCCAAACAATTGGT+CGG | + | chr2.1:1237489-1237508 | None:intergenic | 40.0% | |
| CTCAGGGACGAAAATTCAAA+TGG | - | chr2.1:1236860-1236879 | MS.gene85940:CDS | 40.0% | |
| CTGCTTCCAGAATATGTAAC+AGG | + | chr2.1:1238050-1238069 | None:intergenic | 40.0% | |
| GAAAAATTAGGGTGAGGAAG+AGG | - | chr2.1:1236273-1236292 | MS.gene85940:intron | 40.0% | |
| GAAAGAAGAAGGAAGAAGAG+AGG | - | chr2.1:1236642-1236661 | MS.gene85940:intron | 40.0% | |
| GAAATTGAAGACACGATCTG+AGG | + | chr2.1:1235996-1236015 | None:intergenic | 40.0% | |
| GAAGCTGAGGTTGAATTTGA+TGG | - | chr2.1:1236439-1236458 | MS.gene85940:intron | 40.0% | |
| GAGTTACTCGAATGTAGTGT+AGG | + | chr2.1:1237165-1237184 | None:intergenic | 40.0% | |
| GATTGCTTCACCAAGTATAG+AGG | + | chr2.1:1240153-1240172 | None:intergenic | 40.0% | |
| GCAAAAGCTAGTAACCAAAG+TGG | - | chr2.1:1238272-1238291 | MS.gene85940:intron | 40.0% | |
| GCATTCCATTGGATACTTGT+GGG | - | chr2.1:1236927-1236946 | MS.gene85940:CDS | 40.0% | |
| GGTACTTCTTGTTCTGATTC+TGG | + | chr2.1:1238206-1238225 | None:intergenic | 40.0% | |
| GTGAAGCTAAAGACAACAGT+TGG | + | chr2.1:1237187-1237206 | None:intergenic | 40.0% | |
| TAGAAGTGGTTCTCAGTGTT+TGG | - | chr2.1:1238304-1238323 | MS.gene85940:intron | 40.0% | |
| TAGTGTTTGATGGGGTGATA+AGG | - | chr2.1:1238748-1238767 | MS.gene85940:intron | 40.0% | |
| TCACTGGATGAATGAAGCTA+AGG | + | chr2.1:1237689-1237708 | None:intergenic | 40.0% | |
| TCATCTTCTAGTGAGATGGA+CGG | - | chr2.1:1238074-1238093 | MS.gene85940:intron | 40.0% | |
| TCTTCTCATGGAGCAATCAT+GGG | - | chr2.1:1237739-1237758 | MS.gene85940:intron | 40.0% | |
| TGCATTCCATTGGATACTTG+TGG | - | chr2.1:1236926-1236945 | MS.gene85940:CDS | 40.0% | |
| TGGAGCAATCATGGGAAAAT+TGG | - | chr2.1:1237747-1237766 | MS.gene85940:intron | 40.0% | |
| TTAACATCAGGGAGTGATGA+TGG | + | chr2.1:1240308-1240327 | None:intergenic | 40.0% | |
| TTAGGAGTTGAGCAACTTGA+GGG | + | chr2.1:1240892-1240911 | None:intergenic | 40.0% | |
| TTCTTCTCATGGAGCAATCA+TGG | - | chr2.1:1237738-1237757 | MS.gene85940:intron | 40.0% | |
| TTTAGGAGTTGAGCAACTTG+AGG | + | chr2.1:1240893-1240912 | None:intergenic | 40.0% | |
| TTTATCATCGTACGCTCCAA+GGG | + | chr2.1:1241114-1241133 | None:intergenic | 40.0% | |
| ! | ATGTATGTCATCCCCTTTTG+TGG | - | chr2.1:1237121-1237140 | MS.gene85940:CDS | 40.0% |
| ! | CCAGCAGTGTATTTCCTTTT+GGG | - | chr2.1:1240438-1240457 | MS.gene85940:intron | 40.0% |
| ! | CTAACATGATGACTTGCAGA+TGG | - | chr2.1:1241251-1241270 | MS.gene85940:CDS | 40.0% |
| ! | GGAAAATTGGCCTCTTCATT+CGG | - | chr2.1:1237760-1237779 | MS.gene85940:intron | 40.0% |
| ! | GGATTGGATTGGATGAAGAT+TGG | - | chr2.1:1236309-1236328 | MS.gene85940:intron | 40.0% |
| ! | GTGTGTATAATGGAAGCATG+AGG | + | chr2.1:1238685-1238704 | None:intergenic | 40.0% |
| ! | TACTATTCCTGGCTTGAAGA+AGG | - | chr2.1:1238391-1238410 | MS.gene85940:intron | 40.0% |
| ! | TCCAACGTTCAAGTTAGTGA+GGG | + | chr2.1:1237093-1237112 | None:intergenic | 40.0% |
| ! | TTCCGATTGATTTATGCGAC+CGG | - | chr2.1:1240970-1240989 | MS.gene85940:intron | 40.0% |
| !! | AGATGAGACATGGTATTGGT+AGG | + | chr2.1:1237406-1237425 | None:intergenic | 40.0% |
| !! | CAAAAGCCCATTTTGATCAC+TGG | + | chr2.1:1236141-1236160 | None:intergenic | 40.0% |
| !! | CAGTGATCAAAATGGGCTTT+TGG | - | chr2.1:1236139-1236158 | MS.gene85940:intron | 40.0% |
| !! | CCTTTTGGGAATTCAACTCT+TGG | - | chr2.1:1240452-1240471 | MS.gene85940:intron | 40.0% |
| AAGTTAGTGAGGGTTCCTAG+AGG | + | chr2.1:1237083-1237102 | None:intergenic | 45.0% | |
| AATTACAGGGACAAGATGGG+AGG | - | chr2.1:1236828-1236847 | MS.gene85940:CDS | 45.0% | |
| ACCAATCAGAGCTCTACAAC+TGG | - | chr2.1:1236059-1236078 | MS.gene85940:intron | 45.0% | |
| ACCCTCACTAACTTGAACGT+TGG | - | chr2.1:1237089-1237108 | MS.gene85940:CDS | 45.0% | |
| ACGTGGCACATGATTAGTGA+GGG | + | chr2.1:1236766-1236785 | None:intergenic | 45.0% | |
| AGAACGTGTGAAGGAGTTAG+AGG | - | chr2.1:1240193-1240212 | MS.gene85940:intron | 45.0% | |
| AGAAGAAGAGGATGAAGCTG+AGG | - | chr2.1:1236426-1236445 | MS.gene85940:intron | 45.0% | |
| AGTAGGCCCAACACATTTCT+AGG | + | chr2.1:1240816-1240835 | None:intergenic | 45.0% | |
| AGTTAGAGGAACGGAACAAG+AGG | - | chr2.1:1240207-1240226 | MS.gene85940:intron | 45.0% | |
| ATGAATGTCCTTGGAGTGGA+CGG | + | chr2.1:1238140-1238159 | None:intergenic | 45.0% | |
| ATGCTATACCGGCCACATAT+TGG | - | chr2.1:1237462-1237481 | MS.gene85940:intron | 45.0% | |
| ATGTCAAGATCCCGTGTCAT+TGG | + | chr2.1:1239355-1239374 | None:intergenic | 45.0% | |
| CATTGAGATCCACTGTGAGA+AGG | - | chr2.1:1240355-1240374 | MS.gene85940:intron | 45.0% | |
| CCAACACCCAGTGATCAAAA+TGG | - | chr2.1:1236131-1236150 | MS.gene85940:intron | 45.0% | |
| CCATGAATTCTCGCTCATAC+CGG | + | chr2.1:1236092-1236111 | None:intergenic | 45.0% | |
| CCCAAAAGGAAATACACTGC+TGG | + | chr2.1:1240441-1240460 | None:intergenic | 45.0% | |
| CGTGTCTTCAATTTCGTCGT+TGG | - | chr2.1:1236001-1236020 | MS.gene85940:CDS | 45.0% | |
| CTATTGTTGCTCAGGTACGT+AGG | - | chr2.1:1240480-1240499 | MS.gene85940:intron | 45.0% | |
| CTCCGGTCGCATAAATCAAT+CGG | + | chr2.1:1240975-1240994 | None:intergenic | 45.0% | |
| CTGGATGAATGAAGCTAAGG+GGG | + | chr2.1:1237686-1237705 | None:intergenic | 45.0% | |
| GAATGAAGCTAAGGGGGATA+AGG | + | chr2.1:1237680-1237699 | None:intergenic | 45.0% | |
| GAGAATGAATGTCCTTGGAG+TGG | + | chr2.1:1238144-1238163 | None:intergenic | 45.0% | |
| GAGTATGGAGAAAGCGGTTA+TGG | - | chr2.1:1236401-1236420 | MS.gene85940:intron | 45.0% | |
| GATGTGTGTGCCATCTATGA+TGG | - | chr2.1:1238811-1238830 | MS.gene85940:intron | 45.0% | |
| GATTCTGGTGTAGTAGTAGC+TGG | + | chr2.1:1238191-1238210 | None:intergenic | 45.0% | |
| GCACTTTCAGCTACTATTCC+TGG | - | chr2.1:1238380-1238399 | MS.gene85940:intron | 45.0% | |
| GCAGTTCGCAGGTTTCATTA+AGG | - | chr2.1:1236704-1236723 | MS.gene85940:intron | 45.0% | |
| GGAATGGAGTATGGAGAAAG+CGG | - | chr2.1:1236395-1236414 | MS.gene85940:intron | 45.0% | |
| GGACCGTATTGCCAAACAAT+TGG | + | chr2.1:1237493-1237512 | None:intergenic | 45.0% | |
| GTACACCCACAAGTATCCAA+TGG | + | chr2.1:1236935-1236954 | None:intergenic | 45.0% | |
| GTGTGAAGGAGTTAGAGGAA+CGG | - | chr2.1:1240198-1240217 | MS.gene85940:intron | 45.0% | |
| TACTCGAATGTAGTGTAGGC+TGG | + | chr2.1:1237161-1237180 | None:intergenic | 45.0% | |
| TATGCTTTCAACAAGGCTGG+TGG | - | chr2.1:1241149-1241168 | MS.gene85940:intron | 45.0% | |
| TATTGGGCCGACCAATTGTT+TGG | - | chr2.1:1237479-1237498 | MS.gene85940:intron | 45.0% | |
| TGAAAGAGAAAGGAAGGTGG+TGG | - | chr2.1:1236348-1236367 | MS.gene85940:intron | 45.0% | |
| TGCTATACCGGCCACATATT+GGG | - | chr2.1:1237463-1237482 | MS.gene85940:intron | 45.0% | |
| TGGCTTCACTATTGTTGCTC+AGG | - | chr2.1:1240472-1240491 | MS.gene85940:intron | 45.0% | |
| TTCACTACGTATGGCATGGA+TGG | + | chr2.1:1239579-1239598 | None:intergenic | 45.0% | |
| ! | ACTATGTGTTGGTCTCGTGT+CGG | - | chr2.1:1239202-1239221 | MS.gene85940:CDS | 45.0% |
| ! | ATGGGAGGATTAGTAAGCTC+AGG | - | chr2.1:1236843-1236862 | MS.gene85940:CDS | 45.0% |
| ! | ATGTCATCCCCTTTTGTGGA+TGG | - | chr2.1:1237125-1237144 | MS.gene85940:CDS | 45.0% |
| ! | ATTGTCTTTTCGCAGTTCGC+AGG | - | chr2.1:1236693-1236712 | MS.gene85940:intron | 45.0% |
| ! | CTCCAACGTTCAAGTTAGTG+AGG | + | chr2.1:1237094-1237113 | None:intergenic | 45.0% |
| ! | GCCAGCAGTGTATTTCCTTT+TGG | - | chr2.1:1240437-1240456 | MS.gene85940:intron | 45.0% |
| ! | TGGGAGGATTAGTAAGCTCA+GGG | - | chr2.1:1236844-1236863 | MS.gene85940:CDS | 45.0% |
| !! | AGAGCTCTGATTGGTCTTTG+AGG | + | chr2.1:1236054-1236073 | None:intergenic | 45.0% |
| !! | CCATTTTGATCACTGGGTGT+TGG | + | chr2.1:1236134-1236153 | None:intergenic | 45.0% |
| !! | TCTTTGAGGAGGACGTTTTG+AGG | + | chr2.1:1236040-1236059 | None:intergenic | 45.0% |
| !!! | TGCCATTTTCCTTCTCACAG+TGG | + | chr2.1:1240367-1240386 | None:intergenic | 45.0% |
| !! | ATTTATTATACATTAAAAAA+GGG | + | chr2.1:1239646-1239665 | None:intergenic | 5.0% |
| !! | TATTTATTATACATTAAAAA+AGG | + | chr2.1:1239647-1239666 | None:intergenic | 5.0% |
| AATGTGGGTCAGGTGACTTG+AGG | + | chr2.1:1237437-1237456 | None:intergenic | 50.0% | |
| AGGAACCTGAAGAGGTGGAT+TGG | - | chr2.1:1236293-1236312 | MS.gene85940:intron | 50.0% | |
| AGTGGCGACCATCCACAAAA+GGG | + | chr2.1:1237136-1237155 | None:intergenic | 50.0% | |
| ATCTGAGGATGATGTCGCGA+CGG | + | chr2.1:1235981-1236000 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACAGGCA+CGG | - | chr2.1:1239106-1239125 | MS.gene85940:CDS | 50.0% | |
| CAATTGGTCGGCCCAATATG+TGG | + | chr2.1:1237477-1237496 | None:intergenic | 50.0% | |
| CCAATCCAATCCACCTCTTC+AGG | + | chr2.1:1236301-1236320 | None:intergenic | 50.0% | |
| CCGGTATGAGCGAGAATTCA+TGG | - | chr2.1:1236089-1236108 | MS.gene85940:intron | 50.0% | |
| CGAAGATGAAGCACGGATAC+AGG | - | chr2.1:1239101-1239120 | MS.gene85940:CDS | 50.0% | |
| CGTGGCACATGATTAGTGAG+GGG | + | chr2.1:1236765-1236784 | None:intergenic | 50.0% | |
| GACGTGGCACATGATTAGTG+AGG | + | chr2.1:1236767-1236786 | None:intergenic | 50.0% | |
| GCGGTTATGGAGAGAAGAAG+AGG | - | chr2.1:1236414-1236433 | MS.gene85940:intron | 50.0% | |
| GGTCCGATTGAGATGAGACA+TGG | + | chr2.1:1237416-1237435 | None:intergenic | 50.0% | |
| GTATTACAACTGAGGGCCCT+TGG | - | chr2.1:1241095-1241114 | MS.gene85940:intron | 50.0% | |
| GTGGCACATGATTAGTGAGG+GGG | + | chr2.1:1236764-1236783 | None:intergenic | 50.0% | |
| TGAGGAAGAGGAACCTGAAG+AGG | - | chr2.1:1236285-1236304 | MS.gene85940:intron | 50.0% | |
| ! | ATGACTTGCAGATGGGTGAC+GGG | - | chr2.1:1241259-1241278 | MS.gene85940:CDS | 50.0% |
| ! | GATGACTTGCAGATGGGTGA+CGG | - | chr2.1:1241258-1241277 | MS.gene85940:CDS | 50.0% |
| ! | GCCAGTTGTAGAGCTCTGAT+TGG | + | chr2.1:1236063-1236082 | None:intergenic | 50.0% |
| ! | TTAGTGAGGGGGTGATGATG+TGG | + | chr2.1:1236753-1236772 | None:intergenic | 50.0% |
| !! | CCTGAAGAGGTGGATTGGAT+TGG | - | chr2.1:1236298-1236317 | MS.gene85940:intron | 50.0% |
| !! | CTGTGATGTGTCGACTTCAC+TGG | + | chr2.1:1237705-1237724 | None:intergenic | 50.0% |
| !! | GCTCTGATTGGTCTTTGAGG+AGG | + | chr2.1:1236051-1236070 | None:intergenic | 50.0% |
| !! | GGGTGACGGGTACAATATGA+AGG | - | chr2.1:1241272-1241291 | MS.gene85940:CDS | 50.0% |
| !!! | ACGTTTTGAGGAAGGGTGGT+GGG | + | chr2.1:1236028-1236047 | None:intergenic | 50.0% |
| !!! | GAGGAGGACGTTTTGAGGAA+GGG | + | chr2.1:1236035-1236054 | None:intergenic | 50.0% |
| !!! | TGAGGAGGACGTTTTGAGGA+AGG | + | chr2.1:1236036-1236055 | None:intergenic | 50.0% |
| ATGGACGGCTCAGATAGCTC+AGG | - | chr2.1:1238089-1238108 | MS.gene85940:intron | 55.0% | |
| ATGTAGTGTAGGCTGGCGAG+TGG | + | chr2.1:1237154-1237173 | None:intergenic | 55.0% | |
| CACTTGTGATGAGCAGCGAG+CGG | - | chr2.1:1239324-1239343 | MS.gene85940:CDS | 55.0% | |
| CATCAACACCGTCCACTCCA+AGG | - | chr2.1:1238129-1238148 | MS.gene85940:intron | 55.0% | |
| CTCTACAACTGGCGTGGATC+CGG | - | chr2.1:1236070-1236089 | MS.gene85940:intron | 55.0% | |
| GAGTGGCGACCATCCACAAA+AGG | + | chr2.1:1237137-1237156 | None:intergenic | 55.0% | |
| GGAAGAGGAACCTGAAGAGG+TGG | - | chr2.1:1236288-1236307 | MS.gene85940:intron | 55.0% | |
| GTGGCGACCATCCACAAAAG+GGG | + | chr2.1:1237135-1237154 | None:intergenic | 55.0% | |
| TCAGAGCTCTACAACTGGCG+TGG | - | chr2.1:1236064-1236083 | MS.gene85940:intron | 55.0% | |
| TGGACGGCTCAGATAGCTCA+GGG | - | chr2.1:1238090-1238109 | MS.gene85940:intron | 55.0% | |
| ! | TGTTGGTCTCGTGTCGGTGT+TGG | - | chr2.1:1239208-1239227 | MS.gene85940:CDS | 55.0% |
| !! | AGGTGGTGGAGAGATGCAAG+CGG | - | chr2.1:1236362-1236381 | MS.gene85940:intron | 55.0% |
| !! | GGAGTGGACGGTGTTGATGA+AGG | + | chr2.1:1238128-1238147 | None:intergenic | 55.0% |
| !!! | GACGTTTTGAGGAAGGGTGG+TGG | + | chr2.1:1236029-1236048 | None:intergenic | 55.0% |
| !!! | GAGGACGTTTTGAGGAAGGG+TGG | + | chr2.1:1236032-1236051 | None:intergenic | 55.0% |
| GGCGGAGGTGGAATGGAGTA+TGG | - | chr2.1:1236386-1236405 | MS.gene85940:intron | 60.0% | |
| TGGAGAGATGCAAGCGGAGG+CGG | - | chr2.1:1236368-1236387 | MS.gene85940:intron | 60.0% | |
| TGGTCGGCCCAATATGTGGC+CGG | + | chr2.1:1237473-1237492 | None:intergenic | 60.0% | |
| TGGTGGAGAGATGCAAGCGG+AGG | - | chr2.1:1236365-1236384 | MS.gene85940:intron | 60.0% | |
| !! | AGCGGTGCTGCCAATGACAC+GGG | - | chr2.1:1239342-1239361 | MS.gene85940:intron | 60.0% |
| !! | GAGCGGTGCTGCCAATGACA+CGG | - | chr2.1:1239341-1239360 | MS.gene85940:intron | 60.0% |
| AAGCGGAGGCGGAGGTGGAA+TGG | - | chr2.1:1236379-1236398 | MS.gene85940:intron | 65.0% | |
| AGAGATGCAAGCGGAGGCGG+AGG | - | chr2.1:1236371-1236390 | MS.gene85940:intron | 65.0% | |
| CGCGACGGTTAGCGTCTGAC+CGG | + | chr2.1:1235966-1235985 | None:intergenic | 65.0% | |
| GATGCAAGCGGAGGCGGAGG+TGG | - | chr2.1:1236374-1236393 | MS.gene85940:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 1235956 | 1241347 | 1235956 | ID=MS.gene85940 |
| chr2.1 | mRNA | 1235956 | 1241347 | 1235956 | ID=MS.gene85940.t1;Parent=MS.gene85940 |
| chr2.1 | exon | 1241212 | 1241347 | 1241212 | ID=MS.gene85940.t1.exon1;Parent=MS.gene85940.t1 |
| chr2.1 | CDS | 1241212 | 1241347 | 1241212 | ID=cds.MS.gene85940.t1;Parent=MS.gene85940.t1 |
| chr2.1 | exon | 1240843 | 1240949 | 1240843 | ID=MS.gene85940.t1.exon2;Parent=MS.gene85940.t1 |
| chr2.1 | CDS | 1240843 | 1240949 | 1240843 | ID=cds.MS.gene85940.t1;Parent=MS.gene85940.t1 |
| chr2.1 | exon | 1239522 | 1239611 | 1239522 | ID=MS.gene85940.t1.exon3;Parent=MS.gene85940.t1 |
| chr2.1 | CDS | 1239522 | 1239611 | 1239522 | ID=cds.MS.gene85940.t1;Parent=MS.gene85940.t1 |
| chr2.1 | exon | 1238891 | 1239352 | 1238891 | ID=MS.gene85940.t1.exon4;Parent=MS.gene85940.t1 |
| chr2.1 | CDS | 1238891 | 1239352 | 1238891 | ID=cds.MS.gene85940.t1;Parent=MS.gene85940.t1 |
| chr2.1 | exon | 1236810 | 1237163 | 1236810 | ID=MS.gene85940.t1.exon5;Parent=MS.gene85940.t1 |
| chr2.1 | CDS | 1236810 | 1237163 | 1236810 | ID=cds.MS.gene85940.t1;Parent=MS.gene85940.t1 |
| chr2.1 | exon | 1235956 | 1236033 | 1235956 | ID=MS.gene85940.t1.exon6;Parent=MS.gene85940.t1 |
| chr2.1 | CDS | 1235956 | 1236033 | 1235956 | ID=cds.MS.gene85940.t1;Parent=MS.gene85940.t1 |
| Gene Sequence |
| Protein sequence |
