Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86979.t1 | XP_003597972.1 | 85.1 | 316 | 39 | 2 | 1 | 309 | 1 | 315 | 6.80E-137 | 496.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86979.t1 | Q9T072 | 46.2 | 184 | 91 | 4 | 130 | 306 | 144 | 326 | 4.6e-33 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86979.t1 | G7IMB3 | 85.1 | 316 | 39 | 2 | 1 | 309 | 1 | 315 | 4.9e-137 | 496.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene86979.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene86979 | 0.801287 | 9.67E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene86979 | 0.844795 | 6.06E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene86979 | 0.854246 | 1.40E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene86979 | 0.879448 | 1.24E-69 | -1.69E-46 |
| MS.gene049285 | MS.gene86979 | 0.849638 | 2.84E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene86979 | 0.882493 | 9.94E-71 | -1.69E-46 |
| MS.gene049369 | MS.gene86979 | 0.81067 | 1.03E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene86979 | 0.813702 | 2.24E-51 | -1.69E-46 |
| MS.gene049483 | MS.gene86979 | -0.809866 | 1.53E-50 | -1.69E-46 |
| MS.gene049552 | MS.gene86979 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene049600 | MS.gene86979 | 0.803127 | 4.04E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene86979 | 0.840769 | 7.12E-58 | -1.69E-46 |
| MS.gene049611 | MS.gene86979 | -0.817572 | 3.08E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene86979 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene86979 | 0.857884 | 1.20E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene86979 | 0.831581 | 1.54E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene86979 | 0.825562 | 4.38E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene86979 | 0.804753 | 1.86E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene86979 | 0.874795 | 5.11E-68 | -1.69E-46 |
| MS.gene050323 | MS.gene86979 | 0.835739 | 1.41E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene86979 | 0.842695 | 2.21E-58 | -1.69E-46 |
| MS.gene050380 | MS.gene86979 | -0.838315 | 3.09E-57 | -1.69E-46 |
| MS.gene050381 | MS.gene86979 | -0.846595 | 1.97E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene86979 | 0.827068 | 1.92E-54 | -1.69E-46 |
| MS.gene050499 | MS.gene86979 | 0.842888 | 1.96E-58 | -1.69E-46 |
| MS.gene050502 | MS.gene86979 | 0.853353 | 2.53E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene86979 | 0.857907 | 1.19E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene86979 | 0.837929 | 3.89E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene86979 | 0.816401 | 5.64E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene86979 | 0.80895 | 2.41E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene86979 | 0.859885 | 3.03E-63 | -1.69E-46 |
| MS.gene050662 | MS.gene86979 | 0.835635 | 1.50E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene86979 | 0.850265 | 1.90E-60 | -1.69E-46 |
| MS.gene050686 | MS.gene86979 | 0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene86979 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene86979 | 0.830468 | 2.89E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene86979 | 0.880132 | 7.06E-70 | -1.69E-46 |
| MS.gene05080 | MS.gene86979 | 0.811397 | 7.15E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene86979 | 0.835275 | 1.84E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene86979 | 0.836599 | 8.51E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene86979 | -0.819041 | 1.43E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene86979 | 0.827197 | 1.79E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene86979 | 0.858268 | 9.26E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene86979 | 0.810715 | 1.00E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene86979 | -0.815031 | 1.14E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene86979 | -0.824755 | 6.80E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene86979 | 0.81132 | 7.43E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene86979 | -0.805616 | 1.23E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene86979 | -0.804689 | 1.91E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene86979 | 0.877603 | 5.51E-69 | -1.69E-46 |
| MS.gene051551 | MS.gene86979 | 0.839272 | 1.75E-57 | -1.69E-46 |
| MS.gene051564 | MS.gene86979 | 0.813208 | 2.88E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene86979 | 0.822621 | 2.15E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene86979 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene86979 | 0.836923 | 7.04E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene86979 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene86979 | 0.84043 | 8.74E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene86979 | 0.805485 | 1.30E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene86979 | 0.817973 | 2.50E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene86979 | 0.826298 | 2.93E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene86979 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene86979 | 0.823626 | 1.25E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene86979 | 0.811708 | 6.12E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene86979 | 0.834687 | 2.60E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene86979 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene86979 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene86979 | 0.863795 | 1.93E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene86979 | 0.825484 | 4.57E-54 | -1.69E-46 |
| MS.gene053018 | MS.gene86979 | 0.888197 | 7.31E-73 | -1.69E-46 |
| MS.gene053203 | MS.gene86979 | 0.83012 | 3.51E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene86979 | 0.807133 | 5.86E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene86979 | 0.880562 | 4.96E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene86979 | 0.875904 | 2.13E-68 | -1.69E-46 |
| MS.gene053420 | MS.gene86979 | -0.849703 | 2.73E-60 | -1.69E-46 |
| MS.gene053436 | MS.gene86979 | 0.875465 | 3.02E-68 | -1.69E-46 |
| MS.gene053505 | MS.gene86979 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene86979 | -0.833384 | 5.50E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene86979 | 0.88709 | 1.94E-72 | -1.69E-46 |
| MS.gene053626 | MS.gene86979 | 0.834924 | 2.26E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene86979 | 0.812513 | 4.08E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene86979 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene86979 | 0.825712 | 4.04E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene86979 | 0.817431 | 3.31E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene86979 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene86979 | 0.846574 | 1.99E-59 | -1.69E-46 |
| MS.gene054600 | MS.gene86979 | 0.820808 | 5.64E-53 | -1.69E-46 |
| MS.gene054616 | MS.gene86979 | -0.814234 | 1.71E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene86979 | 0.86257 | 4.61E-64 | -1.69E-46 |
| MS.gene054708 | MS.gene86979 | -0.816902 | 4.35E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene86979 | 0.859651 | 3.57E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene86979 | 0.825872 | 3.70E-54 | -1.69E-46 |
| MS.gene055124 | MS.gene86979 | -0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene86979 | -0.862086 | 6.50E-64 | -1.69E-46 |
| MS.gene055202 | MS.gene86979 | -0.810275 | 1.25E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene86979 | 0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene055212 | MS.gene86979 | 0.817765 | 2.78E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene86979 | 0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene86979 | 0.810268 | 1.25E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene86979 | 0.873099 | 1.91E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene86979 | 0.802873 | 4.56E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene86979 | 0.845214 | 4.67E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene86979 | 0.829832 | 4.13E-55 | -1.69E-46 |
| MS.gene055636 | MS.gene86979 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene86979 | 0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene86979 | 0.861257 | 1.16E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene86979 | 0.810623 | 1.05E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene86979 | 0.824601 | 7.39E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene86979 | 0.812237 | 4.69E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene86979 | 0.835186 | 1.94E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene86979 | 0.806789 | 6.94E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene86979 | 0.815591 | 8.55E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene86979 | 0.844822 | 5.96E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene86979 | 0.841595 | 4.32E-58 | -1.69E-46 |
| MS.gene056448 | MS.gene86979 | 0.840226 | 9.88E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene86979 | 0.831689 | 1.45E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene86979 | 0.873332 | 1.60E-67 | -1.69E-46 |
| MS.gene056510 | MS.gene86979 | 0.830234 | 3.29E-55 | -1.69E-46 |
| MS.gene056549 | MS.gene86979 | 0.814001 | 1.92E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene86979 | 0.880803 | 4.06E-70 | -1.69E-46 |
| MS.gene056878 | MS.gene86979 | 0.839407 | 1.61E-57 | -1.69E-46 |
| MS.gene056942 | MS.gene86979 | 0.82589 | 3.66E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene86979 | 0.803003 | 4.29E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene86979 | 0.843364 | 1.47E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene86979 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene86979 | 0.833608 | 4.84E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene86979 | 0.837071 | 6.45E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene86979 | 0.804154 | 2.48E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene86979 | 0.805106 | 1.57E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene86979 | 0.82712 | 1.86E-54 | -1.69E-46 |
| MS.gene058041 | MS.gene86979 | 0.818812 | 1.61E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene86979 | -0.827386 | 1.61E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene86979 | 0.812297 | 4.55E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene86979 | 0.822834 | 1.92E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene86979 | -0.816629 | 5.01E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene86979 | -0.802058 | 6.72E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene86979 | -0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene86979 | 0.822924 | 1.83E-53 | -1.69E-46 |
| MS.gene058268 | MS.gene86979 | -0.807289 | 5.43E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene86979 | -0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene86979 | 0.813353 | 2.67E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene86979 | 0.826813 | 2.21E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene86979 | 0.852839 | 3.55E-61 | -1.69E-46 |
| MS.gene058459 | MS.gene86979 | 0.82194 | 3.09E-53 | -1.69E-46 |
| MS.gene058544 | MS.gene86979 | 0.809359 | 1.97E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene86979 | 0.822172 | 2.73E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene86979 | 0.862951 | 3.52E-64 | -1.69E-46 |
| MS.gene05883 | MS.gene86979 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene058840 | MS.gene86979 | -0.835447 | 1.67E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene86979 | 0.86912 | 3.93E-66 | -1.69E-46 |
| MS.gene059034 | MS.gene86979 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene86979 | 0.850768 | 1.37E-60 | -1.69E-46 |
| MS.gene059305 | MS.gene86979 | 0.81322 | 2.86E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene86979 | 0.868901 | 4.63E-66 | -1.69E-46 |
| MS.gene059368 | MS.gene86979 | 0.826191 | 3.11E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene86979 | 0.847495 | 1.12E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene86979 | 0.817587 | 3.05E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene86979 | 0.858774 | 6.54E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene86979 | 0.803961 | 2.72E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene86979 | 0.870216 | 1.73E-66 | -1.69E-46 |
| MS.gene059902 | MS.gene86979 | 0.835936 | 1.25E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene86979 | 0.916354 | 1.97E-85 | -1.69E-46 |
| MS.gene060595 | MS.gene86979 | -0.817059 | 4.01E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene86979 | 0.823164 | 1.60E-53 | -1.69E-46 |
| MS.gene060728 | MS.gene86979 | 0.803186 | 3.93E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene86979 | 0.832405 | 9.63E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene86979 | 0.849769 | 2.61E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene86979 | 0.854402 | 1.26E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene86979 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene86979 | 0.814463 | 1.52E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene86979 | 0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene86979 | 0.812084 | 5.06E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene86979 | 0.809689 | 1.67E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene86979 | 0.83822 | 3.27E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene86979 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene061134 | MS.gene86979 | 0.874853 | 4.88E-68 | -1.69E-46 |
| MS.gene061171 | MS.gene86979 | 0.805859 | 1.09E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene86979 | 0.812286 | 4.58E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86979.t1 | MTR_2g104550 | 92.429 | 317 | 14 | 4 | 1 | 309 | 1 | 315 | 0.0 | 564 |
| MS.gene86979.t1 | MTR_2g104490 | 79.288 | 309 | 56 | 6 | 1 | 304 | 1 | 306 | 7.31e-169 | 471 |
| MS.gene86979.t1 | MTR_2g104490 | 79.310 | 290 | 52 | 6 | 1 | 285 | 1 | 287 | 2.84e-157 | 441 |
| MS.gene86979.t1 | MTR_4g009540 | 45.714 | 350 | 125 | 14 | 1 | 305 | 1 | 330 | 2.84e-80 | 247 |
| MS.gene86979.t1 | MTR_4g009110 | 44.693 | 358 | 136 | 12 | 1 | 305 | 1 | 349 | 3.47e-77 | 239 |
| MS.gene86979.t1 | MTR_4g009540 | 44.545 | 330 | 118 | 14 | 1 | 285 | 1 | 310 | 1.48e-69 | 219 |
| MS.gene86979.t1 | MTR_2g104500 | 45.105 | 286 | 132 | 10 | 23 | 305 | 8 | 271 | 6.77e-65 | 206 |
| MS.gene86979.t1 | MTR_8g009020 | 48.571 | 245 | 110 | 5 | 77 | 308 | 84 | 325 | 6.43e-60 | 194 |
| MS.gene86979.t1 | MTR_2g104530 | 43.103 | 290 | 132 | 10 | 25 | 306 | 10 | 274 | 6.63e-58 | 187 |
| MS.gene86979.t1 | MTR_5g014520 | 45.455 | 231 | 108 | 4 | 82 | 301 | 102 | 325 | 1.80e-52 | 175 |
| MS.gene86979.t1 | MTR_5g014600 | 40.940 | 298 | 141 | 11 | 42 | 305 | 38 | 334 | 2.34e-52 | 175 |
| MS.gene86979.t1 | MTR_7g080780 | 37.572 | 346 | 157 | 9 | 1 | 305 | 1 | 328 | 2.52e-49 | 167 |
| MS.gene86979.t1 | MTR_7g080780 | 38.245 | 319 | 141 | 7 | 28 | 305 | 12 | 315 | 3.95e-49 | 166 |
| MS.gene86979.t1 | MTR_8g009010 | 38.305 | 295 | 123 | 8 | 32 | 303 | 11 | 269 | 4.09e-49 | 166 |
| MS.gene86979.t1 | MTR_8g069740 | 42.349 | 281 | 130 | 11 | 20 | 284 | 1 | 265 | 2.43e-48 | 162 |
| MS.gene86979.t1 | MTR_2g104560 | 46.667 | 195 | 93 | 4 | 120 | 307 | 36 | 226 | 1.33e-47 | 159 |
| MS.gene86979.t1 | MTR_4g097940 | 47.594 | 187 | 95 | 3 | 121 | 304 | 138 | 324 | 2.79e-45 | 156 |
| MS.gene86979.t1 | MTR_0250s0040 | 42.029 | 207 | 115 | 4 | 108 | 309 | 58 | 264 | 1.01e-44 | 153 |
| MS.gene86979.t1 | MTR_4g066460 | 37.786 | 262 | 145 | 5 | 59 | 309 | 74 | 328 | 7.88e-44 | 152 |
| MS.gene86979.t1 | MTR_2g104650 | 35.690 | 297 | 147 | 9 | 20 | 303 | 1 | 266 | 8.80e-44 | 151 |
| MS.gene86979.t1 | MTR_4g067010 | 39.044 | 251 | 132 | 6 | 59 | 305 | 83 | 316 | 4.57e-43 | 150 |
| MS.gene86979.t1 | MTR_2g010450 | 48.851 | 174 | 83 | 3 | 134 | 301 | 173 | 346 | 4.91e-43 | 151 |
| MS.gene86979.t1 | MTR_0246s0020 | 38.760 | 258 | 127 | 5 | 82 | 309 | 122 | 378 | 6.61e-43 | 152 |
| MS.gene86979.t1 | MTR_4g092700 | 47.674 | 172 | 85 | 3 | 138 | 304 | 158 | 329 | 1.07e-42 | 150 |
| MS.gene86979.t1 | MTR_6g047570 | 41.538 | 260 | 132 | 11 | 59 | 309 | 87 | 335 | 5.38e-42 | 148 |
| MS.gene86979.t1 | MTR_5g014560 | 35.880 | 301 | 145 | 9 | 23 | 305 | 33 | 303 | 2.17e-41 | 145 |
| MS.gene86979.t1 | MTR_4g097920 | 45.078 | 193 | 91 | 4 | 121 | 304 | 123 | 309 | 2.56e-41 | 145 |
| MS.gene86979.t1 | MTR_4g097920 | 45.078 | 193 | 91 | 4 | 121 | 304 | 138 | 324 | 3.94e-41 | 145 |
| MS.gene86979.t1 | MTR_0011s0210 | 45.763 | 177 | 91 | 3 | 138 | 309 | 183 | 359 | 3.98e-41 | 146 |
| MS.gene86979.t1 | MTR_0011s0260 | 45.763 | 177 | 91 | 3 | 138 | 309 | 183 | 359 | 4.51e-41 | 146 |
| MS.gene86979.t1 | MTR_7g451650 | 47.222 | 180 | 79 | 4 | 128 | 301 | 23 | 192 | 1.34e-40 | 140 |
| MS.gene86979.t1 | MTR_5g014640 | 37.190 | 242 | 141 | 5 | 70 | 305 | 87 | 323 | 5.22e-39 | 140 |
| MS.gene86979.t1 | MTR_2g104590 | 43.523 | 193 | 79 | 5 | 120 | 303 | 50 | 221 | 6.53e-39 | 137 |
| MS.gene86979.t1 | MTR_7g050350 | 52.143 | 140 | 52 | 3 | 167 | 301 | 1 | 130 | 3.29e-38 | 132 |
| MS.gene86979.t1 | MTR_7g451650 | 52.143 | 140 | 52 | 3 | 167 | 301 | 1 | 130 | 3.29e-38 | 132 |
| MS.gene86979.t1 | MTR_4g066380 | 37.903 | 248 | 145 | 3 | 59 | 305 | 82 | 321 | 1.49e-37 | 136 |
| MS.gene86979.t1 | MTR_4g097950 | 37.759 | 241 | 136 | 3 | 80 | 307 | 12 | 251 | 9.99e-37 | 132 |
| MS.gene86979.t1 | MTR_0246s0020 | 38.430 | 242 | 118 | 5 | 82 | 293 | 122 | 362 | 1.78e-36 | 134 |
| MS.gene86979.t1 | MTR_0246s0050 | 36.190 | 210 | 116 | 3 | 105 | 309 | 124 | 320 | 3.14e-36 | 132 |
| MS.gene86979.t1 | MTR_4g009420 | 49.645 | 141 | 58 | 2 | 161 | 301 | 65 | 192 | 5.37e-36 | 128 |
| MS.gene86979.t1 | MTR_4g098035 | 36.190 | 210 | 116 | 3 | 105 | 309 | 145 | 341 | 5.51e-36 | 132 |
| MS.gene86979.t1 | MTR_4g009510 | 46.914 | 162 | 69 | 5 | 149 | 304 | 53 | 203 | 6.48e-35 | 126 |
| MS.gene86979.t1 | MTR_7g451650 | 50.000 | 134 | 52 | 3 | 161 | 289 | 57 | 180 | 3.48e-31 | 115 |
| MS.gene86979.t1 | MTR_4g009420 | 46.512 | 129 | 56 | 2 | 161 | 289 | 65 | 180 | 2.91e-26 | 103 |
| MS.gene86979.t1 | MTR_5g014550 | 40.000 | 125 | 64 | 3 | 168 | 284 | 54 | 175 | 4.47e-17 | 78.6 |
| MS.gene86979.t1 | MTR_6g047550 | 58.209 | 67 | 27 | 1 | 138 | 203 | 173 | 239 | 8.86e-17 | 79.0 |
| MS.gene86979.t1 | MTR_1g072320 | 25.221 | 226 | 141 | 7 | 103 | 304 | 431 | 652 | 5.20e-15 | 75.9 |
| MS.gene86979.t1 | MTR_8g024790 | 25.110 | 227 | 128 | 7 | 51 | 269 | 236 | 428 | 1.22e-14 | 74.3 |
| MS.gene86979.t1 | MTR_8g067280 | 25.692 | 253 | 155 | 6 | 46 | 269 | 361 | 609 | 7.06e-14 | 72.4 |
| MS.gene86979.t1 | MTR_5g030430 | 26.609 | 233 | 139 | 6 | 67 | 269 | 410 | 640 | 1.10e-13 | 72.0 |
| MS.gene86979.t1 | MTR_8g027495 | 35.780 | 109 | 63 | 3 | 137 | 243 | 457 | 560 | 1.51e-13 | 71.2 |
| MS.gene86979.t1 | MTR_7g117670 | 35.514 | 107 | 66 | 2 | 137 | 243 | 401 | 504 | 1.68e-13 | 71.2 |
| MS.gene86979.t1 | MTR_7g096350 | 28.994 | 169 | 97 | 4 | 30 | 194 | 263 | 412 | 4.95e-12 | 66.6 |
| MS.gene86979.t1 | MTR_1g112680 | 36.283 | 113 | 65 | 2 | 90 | 200 | 272 | 379 | 8.84e-12 | 65.9 |
| MS.gene86979.t1 | MTR_8g024770 | 23.563 | 174 | 121 | 5 | 106 | 269 | 248 | 419 | 1.50e-11 | 65.1 |
| MS.gene86979.t1 | MTR_8g098275 | 23.176 | 233 | 143 | 5 | 102 | 303 | 370 | 597 | 3.85e-11 | 63.9 |
| MS.gene86979.t1 | MTR_8g098275 | 23.737 | 198 | 120 | 3 | 137 | 303 | 243 | 440 | 4.53e-11 | 63.5 |
| MS.gene86979.t1 | MTR_8g098275 | 23.176 | 233 | 143 | 5 | 102 | 303 | 277 | 504 | 5.75e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86979.t1 | AT4G37850 | 34.579 | 321 | 177 | 9 | 6 | 307 | 21 | 327 | 2.19e-45 | 157 |
| MS.gene86979.t1 | AT4G37850 | 34.579 | 321 | 177 | 9 | 6 | 307 | 21 | 327 | 2.19e-45 | 157 |
| MS.gene86979.t1 | AT2G22760 | 42.473 | 186 | 96 | 4 | 130 | 305 | 111 | 295 | 1.89e-38 | 138 |
| MS.gene86979.t1 | AT2G22750 | 37.657 | 239 | 127 | 6 | 78 | 300 | 89 | 321 | 1.52e-35 | 131 |
| MS.gene86979.t1 | AT2G22750 | 37.657 | 239 | 127 | 6 | 78 | 300 | 65 | 297 | 1.53e-35 | 130 |
| MS.gene86979.t1 | AT2G22750 | 37.657 | 239 | 127 | 6 | 78 | 300 | 93 | 325 | 1.99e-35 | 130 |
| MS.gene86979.t1 | AT2G22760 | 44.242 | 165 | 82 | 3 | 130 | 285 | 111 | 274 | 8.95e-35 | 128 |
| MS.gene86979.t1 | AT2G22750 | 37.657 | 239 | 126 | 7 | 78 | 300 | 65 | 296 | 4.24e-34 | 126 |
| MS.gene86979.t1 | AT2G22750 | 37.657 | 239 | 126 | 7 | 78 | 300 | 93 | 324 | 4.78e-34 | 127 |
| MS.gene86979.t1 | AT2G22770 | 36.161 | 224 | 108 | 4 | 116 | 304 | 95 | 318 | 7.79e-32 | 121 |
| MS.gene86979.t1 | AT4G09820 | 36.691 | 139 | 73 | 2 | 128 | 266 | 353 | 476 | 1.66e-18 | 86.3 |
| MS.gene86979.t1 | AT4G17880 | 27.830 | 212 | 142 | 5 | 63 | 269 | 347 | 552 | 2.01e-16 | 80.1 |
| MS.gene86979.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 134 | 264 | 124 | 261 | 6.37e-15 | 74.3 |
| MS.gene86979.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 134 | 264 | 175 | 312 | 8.33e-15 | 74.3 |
| MS.gene86979.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 134 | 264 | 124 | 261 | 1.21e-14 | 73.6 |
| MS.gene86979.t1 | AT3G61950 | 32.867 | 143 | 79 | 4 | 134 | 264 | 175 | 312 | 1.55e-14 | 73.6 |
| MS.gene86979.t1 | AT5G46760 | 26.446 | 242 | 159 | 6 | 41 | 269 | 320 | 555 | 1.78e-14 | 74.3 |
| MS.gene86979.t1 | AT2G46510 | 32.787 | 122 | 68 | 2 | 121 | 241 | 377 | 485 | 6.24e-14 | 72.4 |
| MS.gene86979.t1 | AT1G32640 | 28.662 | 157 | 103 | 4 | 121 | 269 | 434 | 589 | 8.25e-14 | 72.4 |
| MS.gene86979.t1 | AT1G63650 | 30.667 | 150 | 77 | 5 | 138 | 262 | 405 | 552 | 9.26e-13 | 68.9 |
| MS.gene86979.t1 | AT1G63650 | 30.667 | 150 | 77 | 5 | 138 | 262 | 405 | 552 | 9.26e-13 | 68.9 |
| MS.gene86979.t1 | AT1G63650 | 30.667 | 150 | 77 | 5 | 138 | 262 | 405 | 552 | 9.26e-13 | 68.9 |
| MS.gene86979.t1 | AT1G12860 | 29.870 | 154 | 89 | 4 | 139 | 277 | 268 | 417 | 1.11e-11 | 65.5 |
| MS.gene86979.t1 | AT1G01260 | 39.437 | 71 | 42 | 1 | 127 | 196 | 421 | 491 | 1.16e-11 | 65.9 |
| MS.gene86979.t1 | AT1G01260 | 39.437 | 71 | 42 | 1 | 127 | 196 | 421 | 491 | 1.16e-11 | 65.9 |
| MS.gene86979.t1 | AT1G01260 | 39.437 | 71 | 42 | 1 | 127 | 196 | 421 | 491 | 1.16e-11 | 65.9 |
| MS.gene86979.t1 | AT1G12860 | 29.870 | 154 | 89 | 4 | 139 | 277 | 268 | 417 | 1.37e-11 | 65.5 |
| MS.gene86979.t1 | AT4G16430 | 42.424 | 66 | 37 | 1 | 127 | 191 | 308 | 373 | 6.13e-11 | 63.2 |
| MS.gene86979.t1 | AT2G16910 | 46.774 | 62 | 33 | 0 | 139 | 200 | 315 | 376 | 6.85e-11 | 63.5 |
| MS.gene86979.t1 | AT3G26744 | 28.571 | 154 | 95 | 4 | 139 | 277 | 308 | 461 | 8.78e-11 | 62.8 |
| MS.gene86979.t1 | AT3G26744 | 28.571 | 154 | 95 | 4 | 139 | 277 | 308 | 461 | 9.94e-11 | 62.8 |
| MS.gene86979.t1 | AT3G26744 | 28.571 | 154 | 95 | 4 | 139 | 277 | 308 | 461 | 9.94e-11 | 62.8 |
| MS.gene86979.t1 | AT3G26744 | 28.571 | 154 | 95 | 4 | 139 | 277 | 308 | 461 | 9.94e-11 | 62.8 |
Find 56 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACTTCTTGTTCTGATTC+TGG | 0.178025 | 2.3:+312266 | None:intergenic |
| CAGCAACCTGTTACATATTC+TGG | 0.210205 | 2.3:-312428 | MS.gene86979:CDS |
| CTACTTCTACTCTTTGTTCT+TGG | 0.252338 | 2.3:+312245 | None:intergenic |
| GCCAGCAGTGTATTTCCTTT+TGG | 0.257466 | 2.3:-310291 | MS.gene86979:CDS |
| TGGAGCAATCATGGGAAAAT+TGG | 0.268938 | 2.3:-312721 | MS.gene86979:CDS |
| GCACTTTCAGCTACTATTCC+TGG | 0.324686 | 2.3:-312089 | MS.gene86979:CDS |
| TCAGTGTTTGGATCACATTA+TGG | 0.344284 | 2.3:-312153 | MS.gene86979:CDS |
| TGTAGTAGTAGCTGGTATTA+TGG | 0.362086 | 2.3:+312289 | None:intergenic |
| TAGAAGTGGTTCTCAGTGTT+TGG | 0.364117 | 2.3:-312165 | MS.gene86979:CDS |
| ATCCACTGTGAGAAGGAAAA+TGG | 0.369029 | 2.3:-310366 | MS.gene86979:CDS |
| AATACTCTTGCTTTAACATC+AGG | 0.372630 | 2.3:+310411 | None:intergenic |
| TTCTTCTCATGGAGCAATCA+TGG | 0.379874 | 2.3:-312730 | None:intergenic |
| AAGTAGTAATAAGAGGAGTT+TGG | 0.386060 | 2.3:-312228 | MS.gene86979:CDS |
| TGGCTTCACTATTGTTGCTC+AGG | 0.404693 | 2.3:-310256 | MS.gene86979:intron |
| CTGCTTCCAGAATATGTAAC+AGG | 0.405610 | 2.3:+312422 | None:intergenic |
| GGAAAATTGGCCTCTTCATT+CGG | 0.420212 | 2.3:-312708 | MS.gene86979:intron |
| AGAGTAGAAGTAGTAATAAG+AGG | 0.424376 | 2.3:-312235 | MS.gene86979:CDS |
| TTCTACTCTTCTTTCCACTT+TGG | 0.465419 | 2.3:+312183 | None:intergenic |
| GATTCTGGTGTAGTAGTAGC+TGG | 0.465607 | 2.3:+312281 | None:intergenic |
| ATTATTACCTTCTTCAAGCC+AGG | 0.465921 | 2.3:+312071 | None:intergenic |
| AGAACGTGTGAAGGAGTTAG+AGG | 0.469057 | 2.3:-310535 | MS.gene86979:CDS |
| TTAACATCAGGGAGTGATGA+TGG | 0.473088 | 2.3:+310423 | None:intergenic |
| AAGGAGAGAATGAATGTCCT+TGG | 0.473742 | 2.3:+312323 | None:intergenic |
| AAATGACACAAATTCTGATC+AGG | 0.480808 | 2.3:-310457 | MS.gene86979:CDS |
| TTTATCATCTTCTAGTGAGA+TGG | 0.493845 | 2.3:-312399 | MS.gene86979:CDS |
| GATTGCTTCACCAAGTATAG+AGG | 0.505445 | 2.3:+310578 | None:intergenic |
| TATTCAAAAGCACTTGCTGT+AGG | 0.506889 | 2.3:+309411 | None:intergenic |
| TGATGTTAAAGCAAGAGTAT+TGG | 0.512297 | 2.3:-310409 | MS.gene86979:CDS |
| TACTATTCCTGGCTTGAAGA+AGG | 0.517604 | 2.3:-312078 | MS.gene86979:intron |
| CAATATGAAGGTGAATGATC+TGG | 0.521092 | 2.3:-309441 | MS.gene86979:CDS |
| CCAAGAGTTGAATTCCCAAA+AGG | 0.521924 | 2.3:+310276 | None:intergenic |
| TCTTCTCATGGAGCAATCAT+GGG | 0.526288 | 2.3:-312729 | None:intergenic |
| ATGGACGGCTCAGATAGCTC+AGG | 0.532196 | 2.3:-312380 | MS.gene86979:CDS |
| ATTCAAAAGCACTTGCTGTA+GGG | 0.533965 | 2.3:+309412 | None:intergenic |
| CCCAAAAGGAAATACACTGC+TGG | 0.556531 | 2.3:+310290 | None:intergenic |
| ATGGACAAGACCTCTATACT+TGG | 0.562754 | 2.3:-310588 | MS.gene86979:CDS |
| AGTGGAAAGAAGAGTAGAAG+TGG | 0.563816 | 2.3:-312179 | MS.gene86979:CDS |
| GCAAAAGCTAGTAACCAAAG+TGG | 0.590525 | 2.3:-312197 | MS.gene86979:CDS |
| GGAGTGGACGGTGTTGATGA+AGG | 0.594219 | 2.3:+312344 | None:intergenic |
| GGGTGACGGGTACAATATGA+AGG | 0.596531 | 2.3:-309453 | MS.gene86979:CDS |
| GTTGATGTAGAGAATATGCA+AGG | 0.598569 | 2.3:-312512 | MS.gene86979:CDS |
| AGTTAGAGGAACGGAACAAG+AGG | 0.599418 | 2.3:-310521 | MS.gene86979:CDS |
| CATTGAGATCCACTGTGAGA+AGG | 0.599535 | 2.3:-310373 | MS.gene86979:CDS |
| GAGAATGAATGTCCTTGGAG+TGG | 0.602643 | 2.3:+312328 | None:intergenic |
| ATGACTTGCAGATGGGTGAC+GGG | 0.609894 | 2.3:-309466 | MS.gene86979:intron |
| ATACTCTTGCTTTAACATCA+GGG | 0.612633 | 2.3:+310412 | None:intergenic |
| AGTGTTATTACCGAATGAAG+AGG | 0.617526 | 2.3:+312698 | None:intergenic |
| CATCAACACCGTCCACTCCA+AGG | 0.620000 | 2.3:-312340 | MS.gene86979:CDS |
| ATGAATGTCCTTGGAGTGGA+CGG | 0.625719 | 2.3:+312332 | None:intergenic |
| TCATCTTCTAGTGAGATGGA+CGG | 0.629400 | 2.3:-312395 | MS.gene86979:CDS |
| GATGACTTGCAGATGGGTGA+CGG | 0.630595 | 2.3:-309467 | MS.gene86979:intron |
| TATTATGGTAGATTTATCAA+AGG | 0.640354 | 2.3:+312304 | None:intergenic |
| ACTACTTCAAGAACGTGTGA+AGG | 0.641075 | 2.3:-310544 | MS.gene86979:CDS |
| TGGACGGCTCAGATAGCTCA+GGG | 0.674267 | 2.3:-312379 | MS.gene86979:CDS |
| GTGTGAAGGAGTTAGAGGAA+CGG | 0.690708 | 2.3:-310530 | MS.gene86979:CDS |
| TTGATGTAGAGAATATGCAA+GGG | 0.725229 | 2.3:-312511 | MS.gene86979:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAATAATTAAATGGA+TGG | + | chr2.3:311960-311979 | None:intergenic | 10.0% |
| !! | TGTTTACTAAAAATAAATAA+AGG | - | chr2.3:311138-311157 | MS.gene86979:intron | 10.0% |
| !! | TTAAATGTTATTATTACAAT+AGG | - | chr2.3:309582-309601 | MS.gene86979:intron | 10.0% |
| !! | TTAATTCAAAAATTAAATCA+GGG | + | chr2.3:309566-309585 | None:intergenic | 10.0% |
| !! | TTTAATTCAAAAATTAAATC+AGG | + | chr2.3:309567-309586 | None:intergenic | 10.0% |
| !!! | AAAAACAATATATTTACTTT+TGG | - | chr2.3:311353-311372 | MS.gene86979:intron | 10.0% |
| !! | TACTAAAAATAAATAAAGGA+TGG | - | chr2.3:311142-311161 | MS.gene86979:intron | 15.0% |
| !! | TGCATAAATTAATTAATAGA+TGG | - | chr2.3:311515-311534 | MS.gene86979:intron | 15.0% |
| !!! | CTAAAACAAATTTTTAAATG+AGG | + | chr2.3:312194-312213 | None:intergenic | 15.0% |
| !!! | GAATAATTTTGTTTTTTTGA+AGG | - | chr2.3:310914-310933 | MS.gene86979:intron | 15.0% |
| !!! | GTGATTTTCTTAATTATTAA+TGG | + | chr2.3:310556-310575 | None:intergenic | 15.0% |
| !! | AATAAAAATTGATGTTCTGT+CGG | - | chr2.3:311008-311027 | MS.gene86979:intron | 20.0% |
| !! | AATTTAGTATAACTATGTGT+TGG | - | chr2.3:310598-310617 | MS.gene86979:intron | 20.0% |
| !! | ATACTCTATATTATTACAAG+TGG | - | chr2.3:310865-310884 | MS.gene86979:intron | 20.0% |
| !! | TATTATGGTAGATTTATCAA+AGG | + | chr2.3:309821-309840 | None:intergenic | 20.0% |
| !! | TTGTTGATCATAATGATTTA+CGG | + | chr2.3:309506-309525 | None:intergenic | 20.0% |
| !!! | ATATTGACTTCTTTTCTTTT+GGG | - | chr2.3:311385-311404 | MS.gene86979:intron | 20.0% |
| !!! | TAATGGCTAACATTAATTTT+GGG | - | chr2.3:310127-310146 | MS.gene86979:intron | 20.0% |
| !!! | TTAATGGCTAACATTAATTT+TGG | - | chr2.3:310126-310145 | MS.gene86979:intron | 20.0% |
| !!! | TTTTATTTTTTCACTACGTA+TGG | + | chr2.3:310980-310999 | None:intergenic | 20.0% |
| ! | AAGTAAAACAACATCAAACT+TGG | - | chr2.3:311229-311248 | MS.gene86979:intron | 25.0% |
| ! | ATTAAAGTATGCTTTCAACA+AGG | - | chr2.3:312539-312558 | MS.gene86979:intron | 25.0% |
| ! | CAAGTTGTTTAAAAGTTCTT+CGG | + | chr2.3:312411-312430 | None:intergenic | 25.0% |
| ! | GTTATTATTACAATAGGAAG+TGG | - | chr2.3:309588-309607 | MS.gene86979:intron | 25.0% |
| ! | TAAGACAACAAAACAAACAA+TGG | - | chr2.3:311194-311213 | MS.gene86979:intron | 25.0% |
| ! | TCTTGAATTGGATTTGAATA+TGG | + | chr2.3:310803-310822 | None:intergenic | 25.0% |
| ! | TTTAGACTTAGAAATGTGTT+GGG | - | chr2.3:312209-312228 | MS.gene86979:CDS | 25.0% |
| ! | TTTATTATGAACTCAGAGTT+TGG | - | chr2.3:310460-310479 | MS.gene86979:CDS | 25.0% |
| !! | AAAGTACTCTAAATCATAGT+AGG | + | chr2.3:312235-312254 | None:intergenic | 25.0% |
| !! | TTTTAGACTTAGAAATGTGT+TGG | - | chr2.3:312208-312227 | MS.gene86979:CDS | 25.0% |
| !!! | CTCATGATCAACTTATTTTT+AGG | + | chr2.3:312308-312327 | None:intergenic | 25.0% |
| !!! | GATATTGACTTCTTTTCTTT+TGG | - | chr2.3:311384-311403 | MS.gene86979:intron | 25.0% |
| !!! | GCATATATGTGCTATTTTAA+TGG | - | chr2.3:310110-310129 | MS.gene86979:intron | 25.0% |
| AAATGACACAAATTCTGATC+AGG | - | chr2.3:311665-311684 | MS.gene86979:intron | 30.0% | |
| AAGTAGTAATAAGAGGAGTT+TGG | - | chr2.3:309894-309913 | MS.gene86979:intron | 30.0% | |
| AATACTCTTGCTTTAACATC+AGG | + | chr2.3:311714-311733 | None:intergenic | 30.0% | |
| AGAGTAGAAGTAGTAATAAG+AGG | - | chr2.3:309887-309906 | MS.gene86979:intron | 30.0% | |
| AGATTTGGATTCTCTTGAAT+TGG | + | chr2.3:310815-310834 | None:intergenic | 30.0% | |
| ATACTCTTGCTTTAACATCA+GGG | + | chr2.3:311713-311732 | None:intergenic | 30.0% | |
| CATTCTCTTTCTAATTGAAC+TGG | - | chr2.3:311980-311999 | MS.gene86979:intron | 30.0% | |
| CTCTCTATCACTATAAGATT+TGG | + | chr2.3:310830-310849 | None:intergenic | 30.0% | |
| GATACTTATAGTAGTAGTTG+AGG | + | chr2.3:311470-311489 | None:intergenic | 30.0% | |
| GCTAATAGTATTACAACTGA+GGG | - | chr2.3:312485-312504 | MS.gene86979:CDS | 30.0% | |
| GTAAAATCGTGAAAGATTCT+TGG | - | chr2.3:312138-312157 | MS.gene86979:CDS | 30.0% | |
| GTACTTGAAAACTAACAAAC+AGG | - | chr2.3:312463-312482 | MS.gene86979:CDS | 30.0% | |
| TATATGTTGACCATCATAGA+TGG | + | chr2.3:310231-310250 | None:intergenic | 30.0% | |
| TATGACATGACATGATTGTA+AGG | - | chr2.3:312589-312608 | MS.gene86979:intron | 30.0% | |
| TCATGTCATGTCATATTTCA+TGG | + | chr2.3:312584-312603 | None:intergenic | 30.0% | |
| TGTTCTGATGAGTTATATCT+TGG | + | chr2.3:310772-310791 | None:intergenic | 30.0% | |
| TTGATGTAGAGAATATGCAA+GGG | - | chr2.3:309611-309630 | MS.gene86979:intron | 30.0% | |
| TTTATCATCTTCTAGTGAGA+TGG | - | chr2.3:309723-309742 | MS.gene86979:intron | 30.0% | |
| ! | CTTTTAAACAACTTGAGAGA+CGG | - | chr2.3:312416-312435 | MS.gene86979:CDS | 30.0% |
| ! | TGATGTTAAAGCAAGAGTAT+TGG | - | chr2.3:311713-311732 | MS.gene86979:intron | 30.0% |
| !! | GTCATTTTAAAGACAAGTAG+TGG | - | chr2.3:312114-312133 | MS.gene86979:CDS | 30.0% |
| !! | TTGTACACAAATCACTTTTG+TGG | + | chr2.3:311647-311666 | None:intergenic | 30.0% |
| !!! | TGTTGTTTTACTTCTCATCT+TGG | + | chr2.3:311222-311241 | None:intergenic | 30.0% |
| !!! | TTTTCAAGTACTCTAAGTCA+TGG | + | chr2.3:312454-312473 | None:intergenic | 30.0% |
| AATCAATCGGAAGTTATGAC+TGG | + | chr2.3:312359-312378 | None:intergenic | 35.0% | |
| AGTTAGCATAAACAAACGAG+TGG | + | chr2.3:310255-310274 | None:intergenic | 35.0% | |
| ATTATTACCTTCTTCAAGCC+AGG | + | chr2.3:310054-310073 | None:intergenic | 35.0% | |
| CAATATGAAGGTGAATGATC+TGG | - | chr2.3:312681-312700 | MS.gene86979:intron | 35.0% | |
| CTACTTCTACTCTTTGTTCT+TGG | + | chr2.3:309880-309899 | None:intergenic | 35.0% | |
| GGCTAATAGTATTACAACTG+AGG | - | chr2.3:312484-312503 | MS.gene86979:CDS | 35.0% | |
| GTTGATGTAGAGAATATGCA+AGG | - | chr2.3:309610-309629 | MS.gene86979:intron | 35.0% | |
| TCAATGCTCAGTATCTATGA+AGG | + | chr2.3:310690-310709 | None:intergenic | 35.0% | |
| TCAGTGTTTGGATCACATTA+TGG | - | chr2.3:309969-309988 | MS.gene86979:intron | 35.0% | |
| TCTATCACATTTGTGTGTCA+TGG | - | chr2.3:310190-310209 | MS.gene86979:intron | 35.0% | |
| TGTAGTAGTAGCTGGTATTA+TGG | + | chr2.3:309836-309855 | None:intergenic | 35.0% | |
| TTCTACTCTTCTTTCCACTT+TGG | + | chr2.3:309942-309961 | None:intergenic | 35.0% | |
| ! | AGCAAGTGCTTTTGAATATG+AGG | - | chr2.3:312716-312735 | MS.gene86979:CDS | 35.0% |
| ! | AGTGTTATTACCGAATGAAG+AGG | + | chr2.3:309427-309446 | None:intergenic | 35.0% |
| ! | TAACATGATGACTTGCAGAT+GGG | - | chr2.3:312649-312668 | MS.gene86979:intron | 35.0% |
| !! | ATTCAAAAGCACTTGCTGTA+GGG | + | chr2.3:312713-312732 | None:intergenic | 35.0% |
| !! | TATTCAAAAGCACTTGCTGT+AGG | + | chr2.3:312714-312733 | None:intergenic | 35.0% |
| !!! | TTTTTTCACTACGTATGGCA+TGG | + | chr2.3:310975-310994 | None:intergenic | 35.0% |
| AAGGAGAGAATGAATGTCCT+TGG | + | chr2.3:309802-309821 | None:intergenic | 40.0% | |
| AAGTATGCTTTCAACAAGGC+TGG | - | chr2.3:312543-312562 | MS.gene86979:intron | 40.0% | |
| ACAGTTACGAAGATGAAGCA+CGG | - | chr2.3:310501-310520 | MS.gene86979:CDS | 40.0% | |
| ACTACTTCAAGAACGTGTGA+AGG | - | chr2.3:311578-311597 | MS.gene86979:intron | 40.0% | |
| AGTGGAAAGAAGAGTAGAAG+TGG | - | chr2.3:309943-309962 | MS.gene86979:intron | 40.0% | |
| AGTTATGCGTGTTCTGATGT+TGG | + | chr2.3:310654-310673 | None:intergenic | 40.0% | |
| ATCCACTGTGAGAAGGAAAA+TGG | - | chr2.3:311756-311775 | MS.gene86979:intron | 40.0% | |
| ATGGACAAGACCTCTATACT+TGG | - | chr2.3:311534-311553 | MS.gene86979:intron | 40.0% | |
| ATTTATCATCGTACGCTCCA+AGG | + | chr2.3:312512-312531 | None:intergenic | 40.0% | |
| CAGCAACCTGTTACATATTC+TGG | - | chr2.3:309694-309713 | MS.gene86979:intron | 40.0% | |
| CATCTGCAAGTCATCATGTT+AGG | + | chr2.3:312650-312669 | None:intergenic | 40.0% | |
| CCAAGAGTTGAATTCCCAAA+AGG | + | chr2.3:311849-311868 | None:intergenic | 40.0% | |
| CTGCTTCCAGAATATGTAAC+AGG | + | chr2.3:309703-309722 | None:intergenic | 40.0% | |
| GATGTATCAGACCATAACTC+CGG | + | chr2.3:312389-312408 | None:intergenic | 40.0% | |
| GATTGCTTCACCAAGTATAG+AGG | + | chr2.3:311547-311566 | None:intergenic | 40.0% | |
| GCAAAAGCTAGTAACCAAAG+TGG | - | chr2.3:309925-309944 | MS.gene86979:intron | 40.0% | |
| GGTACTTCTTGTTCTGATTC+TGG | + | chr2.3:309859-309878 | None:intergenic | 40.0% | |
| TAGAAGTGGTTCTCAGTGTT+TGG | - | chr2.3:309957-309976 | MS.gene86979:intron | 40.0% | |
| TCATCTTCTAGTGAGATGGA+CGG | - | chr2.3:309727-309746 | MS.gene86979:intron | 40.0% | |
| TGCTCAGTATCTATGAAGGA+TGG | + | chr2.3:310686-310705 | None:intergenic | 40.0% | |
| TGGAGCAATCATGGGAAAAT+TGG | - | chr2.3:309401-309420 | MS.gene86979:CDS | 40.0% | |
| TTAACATCAGGGAGTGATGA+TGG | + | chr2.3:311702-311721 | None:intergenic | 40.0% | |
| TTAGGAGTTGAGCAACTTGA+GGG | + | chr2.3:312290-312309 | None:intergenic | 40.0% | |
| TTTAGGAGTTGAGCAACTTG+AGG | + | chr2.3:312291-312310 | None:intergenic | 40.0% | |
| TTTATCATCGTACGCTCCAA+GGG | + | chr2.3:312511-312530 | None:intergenic | 40.0% | |
| ! | CCAGCAGTGTATTTCCTTTT+GGG | - | chr2.3:311832-311851 | MS.gene86979:intron | 40.0% |
| ! | CTAACATGATGACTTGCAGA+TGG | - | chr2.3:312648-312667 | MS.gene86979:intron | 40.0% |
| ! | GGAAAATTGGCCTCTTCATT+CGG | - | chr2.3:309414-309433 | MS.gene86979:CDS | 40.0% |
| ! | TACTATTCCTGGCTTGAAGA+AGG | - | chr2.3:310044-310063 | MS.gene86979:intron | 40.0% |
| ! | TTCCGATTGATTTATGCGAC+CGG | - | chr2.3:312367-312386 | MS.gene86979:CDS | 40.0% |
| !! | CCTTTTGGGAATTCAACTCT+TGG | - | chr2.3:311846-311865 | MS.gene86979:intron | 40.0% |
| AGAACGTGTGAAGGAGTTAG+AGG | - | chr2.3:311587-311606 | MS.gene86979:intron | 45.0% | |
| AGTTAGAGGAACGGAACAAG+AGG | - | chr2.3:311601-311620 | MS.gene86979:intron | 45.0% | |
| ATGAATGTCCTTGGAGTGGA+CGG | + | chr2.3:309793-309812 | None:intergenic | 45.0% | |
| ATGTCAAGATCCCGTGTCAT+TGG | + | chr2.3:310747-310766 | None:intergenic | 45.0% | |
| CATTGAGATCCACTGTGAGA+AGG | - | chr2.3:311749-311768 | MS.gene86979:intron | 45.0% | |
| CCCAAAAGGAAATACACTGC+TGG | + | chr2.3:311835-311854 | None:intergenic | 45.0% | |
| CTATTGTTGCTCAGGTACGT+AGG | - | chr2.3:311874-311893 | MS.gene86979:intron | 45.0% | |
| CTCCGGTCGCATAAATCAAT+CGG | + | chr2.3:312372-312391 | None:intergenic | 45.0% | |
| GAGAATGAATGTCCTTGGAG+TGG | + | chr2.3:309797-309816 | None:intergenic | 45.0% | |
| GATGTGTGTGCCATCTATGA+TGG | - | chr2.3:310218-310237 | MS.gene86979:intron | 45.0% | |
| GATTCTGGTGTAGTAGTAGC+TGG | + | chr2.3:309844-309863 | None:intergenic | 45.0% | |
| GATTTATGCGACCGGAGTTA+TGG | - | chr2.3:312375-312394 | MS.gene86979:CDS | 45.0% | |
| GCACTTTCAGCTACTATTCC+TGG | - | chr2.3:310033-310052 | MS.gene86979:intron | 45.0% | |
| GTGTGAAGGAGTTAGAGGAA+CGG | - | chr2.3:311592-311611 | MS.gene86979:intron | 45.0% | |
| TGGCTTCACTATTGTTGCTC+AGG | - | chr2.3:311866-311885 | MS.gene86979:intron | 45.0% | |
| TTCACTACGTATGGCATGGA+TGG | + | chr2.3:310971-310990 | None:intergenic | 45.0% | |
| ! | ACTATGTGTTGGTCTCGTGT+CGG | - | chr2.3:310609-310628 | MS.gene86979:intron | 45.0% |
| ! | GCCAGCAGTGTATTTCCTTT+TGG | - | chr2.3:311831-311850 | MS.gene86979:intron | 45.0% |
| !!! | TGCCATTTTCCTTCTCACAG+TGG | + | chr2.3:311761-311780 | None:intergenic | 45.0% |
| !! | AACAATAAATAAATATATTT+AGG | + | chr2.3:312072-312091 | None:intergenic | 5.0% |
| !! | AATGATATTTAATAATTAAA+TGG | + | chr2.3:311964-311983 | None:intergenic | 5.0% |
| !! | ACAATAAATAAATATATTTA+GGG | + | chr2.3:312071-312090 | None:intergenic | 5.0% |
| !! | ATTTATTATACATTAAAAAA+GGG | + | chr2.3:311038-311057 | None:intergenic | 5.0% |
| !! | TATTTATTATACATTAAAAA+AGG | + | chr2.3:311039-311058 | None:intergenic | 5.0% |
| ATGAAGCACGGATACAGGCA+CGG | - | chr2.3:310513-310532 | MS.gene86979:CDS | 50.0% | |
| CGAAGATGAAGCACGGATAC+AGG | - | chr2.3:310508-310527 | MS.gene86979:CDS | 50.0% | |
| GTATTACAACTGAGGGCCCT+TGG | - | chr2.3:312492-312511 | MS.gene86979:CDS | 50.0% | |
| ! | ATGACTTGCAGATGGGTGAC+GGG | - | chr2.3:312656-312675 | MS.gene86979:intron | 50.0% |
| ! | GATGACTTGCAGATGGGTGA+CGG | - | chr2.3:312655-312674 | MS.gene86979:intron | 50.0% |
| !! | GGGTGACGGGTACAATATGA+AGG | - | chr2.3:312669-312688 | MS.gene86979:intron | 50.0% |
| ATGGACGGCTCAGATAGCTC+AGG | - | chr2.3:309742-309761 | MS.gene86979:intron | 55.0% | |
| CACTTGTGATGAGCAGCGAG+CGG | - | chr2.3:310716-310735 | MS.gene86979:intron | 55.0% | |
| CATCAACACCGTCCACTCCA+AGG | - | chr2.3:309782-309801 | MS.gene86979:intron | 55.0% | |
| TGGACGGCTCAGATAGCTCA+GGG | - | chr2.3:309743-309762 | MS.gene86979:intron | 55.0% | |
| ! | TGTTGGTCTCGTGTCGGTGT+CGG | - | chr2.3:310615-310634 | MS.gene86979:intron | 55.0% |
| !! | GGAGTGGACGGTGTTGATGA+AGG | + | chr2.3:309781-309800 | None:intergenic | 55.0% |
| !! | AGCGGTGCTGCCAATGACAC+GGG | - | chr2.3:310734-310753 | MS.gene86979:intron | 60.0% |
| !! | GAGCGGTGCTGCCAATGACA+CGG | - | chr2.3:310733-310752 | MS.gene86979:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 309400 | 312744 | 309400 | ID=MS.gene86979 |
| chr2.3 | mRNA | 309400 | 312744 | 309400 | ID=MS.gene86979.t1;Parent=MS.gene86979 |
| chr2.3 | exon | 312709 | 312744 | 312709 | ID=MS.gene86979.t1.exon1;Parent=MS.gene86979.t1 |
| chr2.3 | CDS | 312709 | 312744 | 312709 | ID=cds.MS.gene86979.t1;Parent=MS.gene86979.t1 |
| chr2.3 | exon | 312079 | 312540 | 312079 | ID=MS.gene86979.t1.exon2;Parent=MS.gene86979.t1 |
| chr2.3 | CDS | 312079 | 312540 | 312079 | ID=cds.MS.gene86979.t1;Parent=MS.gene86979.t1 |
| chr2.3 | exon | 310257 | 310610 | 310257 | ID=MS.gene86979.t1.exon3;Parent=MS.gene86979.t1 |
| chr2.3 | CDS | 310257 | 310610 | 310257 | ID=cds.MS.gene86979.t1;Parent=MS.gene86979.t1 |
| chr2.3 | exon | 309400 | 309477 | 309400 | ID=MS.gene86979.t1.exon4;Parent=MS.gene86979.t1 |
| chr2.3 | CDS | 309400 | 309477 | 309400 | ID=cds.MS.gene86979.t1;Parent=MS.gene86979.t1 |
| Gene Sequence |
| Protein sequence |
