Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073883.t1 | XP_003612461.2 | 95.5 | 582 | 24 | 2 | 1 | 581 | 1 | 581 | 1.70E-306 | 1061.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073883.t1 | O49675 | 72.3 | 517 | 132 | 5 | 72 | 578 | 80 | 595 | 9.7e-226 | 784.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073883.t1 | G7K3Y7 | 95.5 | 582 | 24 | 2 | 1 | 581 | 1 | 581 | 1.2e-306 | 1061.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene073883 | 0.823635 | 1.25E-53 | -1.69E-46 |
MS.gene049171 | MS.gene073883 | 0.877287 | 7.09E-69 | -1.69E-46 |
MS.gene049217 | MS.gene073883 | 0.833793 | 4.35E-56 | -1.69E-46 |
MS.gene049222 | MS.gene073883 | 0.909005 | 9.18E-82 | -1.69E-46 |
MS.gene049232 | MS.gene073883 | 0.883955 | 2.89E-71 | -1.69E-46 |
MS.gene049285 | MS.gene073883 | 0.889666 | 1.98E-73 | -1.69E-46 |
MS.gene049320 | MS.gene073883 | 0.900603 | 6.21E-78 | -1.69E-46 |
MS.gene049552 | MS.gene073883 | 0.833447 | 5.30E-56 | -1.69E-46 |
MS.gene049600 | MS.gene073883 | 0.809129 | 2.20E-50 | -1.69E-46 |
MS.gene049609 | MS.gene073883 | 0.878672 | 2.32E-69 | -1.69E-46 |
MS.gene049615 | MS.gene073883 | 0.812129 | 4.95E-51 | -1.69E-46 |
MS.gene049627 | MS.gene073883 | 0.830307 | 3.16E-55 | -1.69E-46 |
MS.gene049633 | MS.gene073883 | 0.849781 | 2.59E-60 | -1.69E-46 |
MS.gene049656 | MS.gene073883 | 0.831279 | 1.83E-55 | -1.69E-46 |
MS.gene049657 | MS.gene073883 | 0.829507 | 4.95E-55 | -1.69E-46 |
MS.gene049805 | MS.gene073883 | 0.841578 | 4.36E-58 | -1.69E-46 |
MS.gene049865 | MS.gene073883 | 0.801268 | 9.76E-49 | -1.69E-46 |
MS.gene05010 | MS.gene073883 | 0.885014 | 1.17E-71 | -1.69E-46 |
MS.gene050163 | MS.gene073883 | 0.853112 | 2.96E-61 | -1.69E-46 |
MS.gene050165 | MS.gene073883 | 0.830425 | 2.96E-55 | -1.69E-46 |
MS.gene050170 | MS.gene073883 | 0.887552 | 1.29E-72 | -1.69E-46 |
MS.gene050216 | MS.gene073883 | 0.818329 | 2.07E-52 | -1.69E-46 |
MS.gene050323 | MS.gene073883 | 0.865317 | 6.45E-65 | -1.69E-46 |
MS.gene050333 | MS.gene073883 | 0.831124 | 1.99E-55 | -1.69E-46 |
MS.gene050381 | MS.gene073883 | -0.827827 | 1.26E-54 | -1.69E-46 |
MS.gene050496 | MS.gene073883 | 0.880651 | 4.60E-70 | -1.69E-46 |
MS.gene050502 | MS.gene073883 | 0.880441 | 5.47E-70 | -1.69E-46 |
MS.gene050504 | MS.gene073883 | 0.899488 | 1.89E-77 | -1.69E-46 |
MS.gene050518 | MS.gene073883 | 0.879979 | 8.01E-70 | -1.69E-46 |
MS.gene050520 | MS.gene073883 | 0.81966 | 1.03E-52 | -1.69E-46 |
MS.gene050538 | MS.gene073883 | 0.847964 | 8.28E-60 | -1.69E-46 |
MS.gene050577 | MS.gene073883 | 0.908625 | 1.39E-81 | -1.69E-46 |
MS.gene050593 | MS.gene073883 | 0.847106 | 1.43E-59 | -1.69E-46 |
MS.gene050612 | MS.gene073883 | 0.875947 | 2.06E-68 | -1.69E-46 |
MS.gene050647 | MS.gene073883 | -0.806065 | 9.86E-50 | -1.69E-46 |
MS.gene050662 | MS.gene073883 | 0.800994 | 1.11E-48 | -1.69E-46 |
MS.gene050675 | MS.gene073883 | 0.866534 | 2.66E-65 | -1.69E-46 |
MS.gene050699 | MS.gene073883 | 0.900186 | 9.43E-78 | -1.69E-46 |
MS.gene050747 | MS.gene073883 | 0.923281 | 3.26E-89 | -1.69E-46 |
MS.gene050772 | MS.gene073883 | 0.900644 | 5.96E-78 | -1.69E-46 |
MS.gene05080 | MS.gene073883 | 0.861105 | 1.30E-63 | -1.69E-46 |
MS.gene05081 | MS.gene073883 | 0.801478 | 8.84E-49 | -1.69E-46 |
MS.gene050868 | MS.gene073883 | 0.874248 | 7.83E-68 | -1.69E-46 |
MS.gene050871 | MS.gene073883 | 0.873994 | 9.55E-68 | -1.69E-46 |
MS.gene050883 | MS.gene073883 | -0.829504 | 4.96E-55 | -1.69E-46 |
MS.gene050904 | MS.gene073883 | 0.830303 | 3.17E-55 | -1.69E-46 |
MS.gene050950 | MS.gene073883 | 0.913465 | 5.96E-84 | -1.69E-46 |
MS.gene050986 | MS.gene073883 | 0.893908 | 4.05E-75 | -1.69E-46 |
MS.gene05100 | MS.gene073883 | 0.865057 | 7.78E-65 | -1.69E-46 |
MS.gene051167 | MS.gene073883 | -0.815532 | 8.81E-52 | -1.69E-46 |
MS.gene05118 | MS.gene073883 | 0.814985 | 1.17E-51 | -1.69E-46 |
MS.gene051268 | MS.gene073883 | 0.812334 | 4.47E-51 | -1.69E-46 |
MS.gene051317 | MS.gene073883 | 0.828073 | 1.10E-54 | -1.69E-46 |
MS.gene051336 | MS.gene073883 | 0.807551 | 4.78E-50 | -1.69E-46 |
MS.gene051387 | MS.gene073883 | 0.840449 | 8.64E-58 | -1.69E-46 |
MS.gene051509 | MS.gene073883 | 0.848264 | 6.85E-60 | -1.69E-46 |
MS.gene051551 | MS.gene073883 | 0.887993 | 8.75E-73 | -1.69E-46 |
MS.gene051560 | MS.gene073883 | 0.816342 | 5.81E-52 | -1.69E-46 |
MS.gene051666 | MS.gene073883 | 0.833366 | 5.56E-56 | -1.69E-46 |
MS.gene051694 | MS.gene073883 | 0.833364 | 5.57E-56 | -1.69E-46 |
MS.gene051810 | MS.gene073883 | 0.811772 | 5.92E-51 | -1.69E-46 |
MS.gene051838 | MS.gene073883 | 0.84983 | 2.51E-60 | -1.69E-46 |
MS.gene051858 | MS.gene073883 | 0.821292 | 4.36E-53 | -1.69E-46 |
MS.gene051941 | MS.gene073883 | 0.840203 | 1.00E-57 | -1.69E-46 |
MS.gene052164 | MS.gene073883 | 0.897353 | 1.53E-76 | -1.69E-46 |
MS.gene052271 | MS.gene073883 | 0.813634 | 2.32E-51 | -1.69E-46 |
MS.gene052318 | MS.gene073883 | 0.809222 | 2.11E-50 | -1.69E-46 |
MS.gene052346 | MS.gene073883 | 0.85087 | 1.28E-60 | -1.69E-46 |
MS.gene052421 | MS.gene073883 | 0.821674 | 3.56E-53 | -1.69E-46 |
MS.gene052482 | MS.gene073883 | 0.896161 | 4.81E-76 | -1.69E-46 |
MS.gene052486 | MS.gene073883 | 0.901218 | 3.35E-78 | -1.69E-46 |
MS.gene052494 | MS.gene073883 | -0.800276 | 1.55E-48 | -1.69E-46 |
MS.gene052501 | MS.gene073883 | 0.862548 | 4.69E-64 | -1.69E-46 |
MS.gene052503 | MS.gene073883 | 0.911642 | 4.82E-83 | -1.69E-46 |
MS.gene052504 | MS.gene073883 | 0.82761 | 1.42E-54 | -1.69E-46 |
MS.gene052505 | MS.gene073883 | 0.841969 | 3.44E-58 | -1.69E-46 |
MS.gene052506 | MS.gene073883 | 0.869616 | 2.71E-66 | -1.69E-46 |
MS.gene052615 | MS.gene073883 | 0.885582 | 7.18E-72 | -1.69E-46 |
MS.gene052820 | MS.gene073883 | 0.809394 | 1.93E-50 | -1.69E-46 |
MS.gene052822 | MS.gene073883 | 0.864472 | 1.19E-64 | -1.69E-46 |
MS.gene052823 | MS.gene073883 | 0.910928 | 1.08E-82 | -1.69E-46 |
MS.gene052825 | MS.gene073883 | 0.904276 | 1.45E-79 | -1.69E-46 |
MS.gene052916 | MS.gene073883 | 0.82384 | 1.12E-53 | -1.69E-46 |
MS.gene052966 | MS.gene073883 | 0.86576 | 4.68E-65 | -1.69E-46 |
MS.gene052982 | MS.gene073883 | 0.832237 | 1.06E-55 | -1.69E-46 |
MS.gene053018 | MS.gene073883 | 0.803943 | 2.74E-49 | -1.69E-46 |
MS.gene053117 | MS.gene073883 | 0.820712 | 5.93E-53 | -1.69E-46 |
MS.gene053203 | MS.gene073883 | 0.900971 | 4.29E-78 | -1.69E-46 |
MS.gene053207 | MS.gene073883 | 0.85915 | 5.05E-63 | -1.69E-46 |
MS.gene053213 | MS.gene073883 | 0.916948 | 9.62E-86 | -1.69E-46 |
MS.gene053286 | MS.gene073883 | 0.916537 | 1.58E-85 | -1.69E-46 |
MS.gene053420 | MS.gene073883 | -0.815619 | 8.43E-52 | -1.69E-46 |
MS.gene053421 | MS.gene073883 | -0.807239 | 5.57E-50 | -1.69E-46 |
MS.gene053436 | MS.gene073883 | 0.9874 | 4.01E-170 | -1.69E-46 |
MS.gene053479 | MS.gene073883 | 0.843219 | 1.60E-58 | -1.69E-46 |
MS.gene053480 | MS.gene073883 | 0.858952 | 5.78E-63 | -1.69E-46 |
MS.gene053549 | MS.gene073883 | -0.813006 | 3.18E-51 | -1.69E-46 |
MS.gene053574 | MS.gene073883 | 0.924485 | 6.61E-90 | -1.69E-46 |
MS.gene053579 | MS.gene073883 | 0.816306 | 5.92E-52 | -1.69E-46 |
MS.gene053626 | MS.gene073883 | 0.889136 | 3.17E-73 | -1.69E-46 |
MS.gene053632 | MS.gene073883 | 0.86714 | 1.70E-65 | -1.69E-46 |
MS.gene053633 | MS.gene073883 | 0.812314 | 4.51E-51 | -1.69E-46 |
MS.gene053824 | MS.gene073883 | 0.853266 | 2.68E-61 | -1.69E-46 |
MS.gene053916 | MS.gene073883 | 0.831726 | 1.42E-55 | -1.69E-46 |
MS.gene054003 | MS.gene073883 | 0.815754 | 7.86E-52 | -1.69E-46 |
MS.gene054408 | MS.gene073883 | 0.89478 | 1.79E-75 | -1.69E-46 |
MS.gene054595 | MS.gene073883 | 0.913023 | 9.95E-84 | -1.69E-46 |
MS.gene054600 | MS.gene073883 | 0.886049 | 4.79E-72 | -1.69E-46 |
MS.gene054642 | MS.gene073883 | 0.872529 | 2.96E-67 | -1.69E-46 |
MS.gene054706 | MS.gene073883 | -0.826307 | 2.91E-54 | -1.69E-46 |
MS.gene05470 | MS.gene073883 | 0.881166 | 3.01E-70 | -1.69E-46 |
MS.gene054927 | MS.gene073883 | 0.878922 | 1.90E-69 | -1.69E-46 |
MS.gene05494 | MS.gene073883 | 0.802493 | 5.47E-49 | -1.69E-46 |
MS.gene054954 | MS.gene073883 | 0.888685 | 4.74E-73 | -1.69E-46 |
MS.gene05505 | MS.gene073883 | 0.842017 | 3.34E-58 | -1.69E-46 |
MS.gene055154 | MS.gene073883 | -0.83452 | 2.86E-56 | -1.69E-46 |
MS.gene055206 | MS.gene073883 | 0.829011 | 6.54E-55 | -1.69E-46 |
MS.gene055212 | MS.gene073883 | 0.81632 | 5.88E-52 | -1.69E-46 |
MS.gene055224 | MS.gene073883 | 0.834327 | 3.20E-56 | -1.69E-46 |
MS.gene055289 | MS.gene073883 | 0.84325 | 1.57E-58 | -1.69E-46 |
MS.gene055362 | MS.gene073883 | 0.907121 | 7.13E-81 | -1.69E-46 |
MS.gene055502 | MS.gene073883 | 0.8909 | 6.48E-74 | -1.69E-46 |
MS.gene055577 | MS.gene073883 | 0.871611 | 5.99E-67 | -1.69E-46 |
MS.gene055629 | MS.gene073883 | 0.853962 | 1.69E-61 | -1.69E-46 |
MS.gene055647 | MS.gene073883 | 0.803295 | 3.73E-49 | -1.69E-46 |
MS.gene055722 | MS.gene073883 | 0.863583 | 2.24E-64 | -1.69E-46 |
MS.gene055741 | MS.gene073883 | 0.806448 | 8.19E-50 | -1.69E-46 |
MS.gene055748 | MS.gene073883 | 0.864079 | 1.57E-64 | -1.69E-46 |
MS.gene055750 | MS.gene073883 | 0.887821 | 1.02E-72 | -1.69E-46 |
MS.gene055751 | MS.gene073883 | 0.857515 | 1.55E-62 | -1.69E-46 |
MS.gene055776 | MS.gene073883 | 0.841927 | 3.53E-58 | -1.69E-46 |
MS.gene05589 | MS.gene073883 | 0.892605 | 1.36E-74 | -1.69E-46 |
MS.gene055909 | MS.gene073883 | 0.824969 | 6.05E-54 | -1.69E-46 |
MS.gene055911 | MS.gene073883 | 0.82352 | 1.33E-53 | -1.69E-46 |
MS.gene055941 | MS.gene073883 | 0.858574 | 7.50E-63 | -1.69E-46 |
MS.gene056040 | MS.gene073883 | 0.893339 | 6.89E-75 | -1.69E-46 |
MS.gene056046 | MS.gene073883 | 0.836141 | 1.11E-56 | -1.69E-46 |
MS.gene056083 | MS.gene073883 | 0.829069 | 6.33E-55 | -1.69E-46 |
MS.gene056166 | MS.gene073883 | 0.874399 | 6.96E-68 | -1.69E-46 |
MS.gene056374 | MS.gene073883 | 0.874098 | 8.81E-68 | -1.69E-46 |
MS.gene056409 | MS.gene073883 | 0.843689 | 1.20E-58 | -1.69E-46 |
MS.gene056422 | MS.gene073883 | 0.800142 | 1.66E-48 | -1.69E-46 |
MS.gene056446 | MS.gene073883 | 0.901914 | 1.65E-78 | -1.69E-46 |
MS.gene056448 | MS.gene073883 | 0.824728 | 6.90E-54 | -1.69E-46 |
MS.gene056449 | MS.gene073883 | 0.800824 | 1.20E-48 | -1.69E-46 |
MS.gene056450 | MS.gene073883 | 0.822305 | 2.54E-53 | -1.69E-46 |
MS.gene056487 | MS.gene073883 | 0.814177 | 1.76E-51 | -1.69E-46 |
MS.gene056504 | MS.gene073883 | 0.919735 | 3.10E-87 | -1.69E-46 |
MS.gene056510 | MS.gene073883 | 0.891204 | 4.92E-74 | -1.69E-46 |
MS.gene056610 | MS.gene073883 | 0.85102 | 1.16E-60 | -1.69E-46 |
MS.gene05664 | MS.gene073883 | 0.807007 | 6.24E-50 | -1.69E-46 |
MS.gene056657 | MS.gene073883 | 0.907824 | 3.34E-81 | -1.69E-46 |
MS.gene05666 | MS.gene073883 | 0.828904 | 6.94E-55 | -1.69E-46 |
MS.gene056692 | MS.gene073883 | 0.841422 | 4.80E-58 | -1.69E-46 |
MS.gene056878 | MS.gene073883 | 0.863966 | 1.71E-64 | -1.69E-46 |
MS.gene057019 | MS.gene073883 | 0.823075 | 1.68E-53 | -1.69E-46 |
MS.gene057076 | MS.gene073883 | 0.837739 | 4.35E-57 | -1.69E-46 |
MS.gene057086 | MS.gene073883 | 0.848738 | 5.06E-60 | -1.69E-46 |
MS.gene057331 | MS.gene073883 | 0.846658 | 1.89E-59 | -1.69E-46 |
MS.gene057416 | MS.gene073883 | 0.880639 | 4.65E-70 | -1.69E-46 |
MS.gene057658 | MS.gene073883 | 0.840447 | 8.65E-58 | -1.69E-46 |
MS.gene057734 | MS.gene073883 | 0.842771 | 2.11E-58 | -1.69E-46 |
MS.gene057831 | MS.gene073883 | 0.881796 | 1.78E-70 | -1.69E-46 |
MS.gene05787 | MS.gene073883 | 0.894529 | 2.26E-75 | -1.69E-46 |
MS.gene058019 | MS.gene073883 | 0.847743 | 9.53E-60 | -1.69E-46 |
MS.gene058130 | MS.gene073883 | 0.856484 | 3.12E-62 | -1.69E-46 |
MS.gene058157 | MS.gene073883 | 0.842987 | 1.85E-58 | -1.69E-46 |
MS.gene058183 | MS.gene073883 | 0.819154 | 1.35E-52 | -1.69E-46 |
MS.gene058323 | MS.gene073883 | 0.809234 | 2.09E-50 | -1.69E-46 |
MS.gene058334 | MS.gene073883 | -0.837759 | 4.30E-57 | -1.69E-46 |
MS.gene058338 | MS.gene073883 | 0.850581 | 1.55E-60 | -1.69E-46 |
MS.gene05837 | MS.gene073883 | 0.894627 | 2.06E-75 | -1.69E-46 |
MS.gene058419 | MS.gene073883 | 0.896849 | 2.49E-76 | -1.69E-46 |
MS.gene058420 | MS.gene073883 | 0.804543 | 2.05E-49 | -1.69E-46 |
MS.gene058544 | MS.gene073883 | 0.902574 | 8.44E-79 | -1.69E-46 |
MS.gene058723 | MS.gene073883 | 0.818084 | 2.36E-52 | -1.69E-46 |
MS.gene058773 | MS.gene073883 | 0.859251 | 4.71E-63 | -1.69E-46 |
MS.gene058838 | MS.gene073883 | 0.87128 | 7.71E-67 | -1.69E-46 |
MS.gene05883 | MS.gene073883 | 0.859591 | 3.72E-63 | -1.69E-46 |
MS.gene059022 | MS.gene073883 | 0.889576 | 2.14E-73 | -1.69E-46 |
MS.gene059023 | MS.gene073883 | 0.879009 | 1.77E-69 | -1.69E-46 |
MS.gene059034 | MS.gene073883 | 0.814435 | 1.54E-51 | -1.69E-46 |
MS.gene05913 | MS.gene073883 | 0.817531 | 3.14E-52 | -1.69E-46 |
MS.gene059303 | MS.gene073883 | 0.830344 | 3.10E-55 | -1.69E-46 |
MS.gene059305 | MS.gene073883 | 0.803109 | 4.08E-49 | -1.69E-46 |
MS.gene05934 | MS.gene073883 | 0.825774 | 3.90E-54 | -1.69E-46 |
MS.gene059367 | MS.gene073883 | 0.88169 | 1.95E-70 | -1.69E-46 |
MS.gene059368 | MS.gene073883 | 0.843651 | 1.23E-58 | -1.69E-46 |
MS.gene059517 | MS.gene073883 | 0.814184 | 1.75E-51 | -1.69E-46 |
MS.gene059667 | MS.gene073883 | 0.873093 | 1.92E-67 | -1.69E-46 |
MS.gene059677 | MS.gene073883 | 0.877847 | 4.53E-69 | -1.69E-46 |
MS.gene059680 | MS.gene073883 | 0.814935 | 1.20E-51 | -1.69E-46 |
MS.gene059718 | MS.gene073883 | 0.897223 | 1.73E-76 | -1.69E-46 |
MS.gene059756 | MS.gene073883 | 0.869758 | 2.44E-66 | -1.69E-46 |
MS.gene059801 | MS.gene073883 | 0.848419 | 6.20E-60 | -1.69E-46 |
MS.gene059837 | MS.gene073883 | 0.856791 | 2.53E-62 | -1.69E-46 |
MS.gene059865 | MS.gene073883 | 0.884161 | 2.43E-71 | -1.69E-46 |
MS.gene059902 | MS.gene073883 | 0.819574 | 1.08E-52 | -1.69E-46 |
MS.gene05996 | MS.gene073883 | 0.805079 | 1.59E-49 | -1.69E-46 |
MS.gene06000 | MS.gene073883 | 0.864369 | 1.28E-64 | -1.69E-46 |
MS.gene060372 | MS.gene073883 | 0.809808 | 1.58E-50 | -1.69E-46 |
MS.gene060482 | MS.gene073883 | 0.886136 | 4.45E-72 | -1.69E-46 |
MS.gene060485 | MS.gene073883 | 0.809695 | 1.67E-50 | -1.69E-46 |
MS.gene060593 | MS.gene073883 | -0.801735 | 7.83E-49 | -1.69E-46 |
MS.gene060595 | MS.gene073883 | -0.827712 | 1.34E-54 | -1.69E-46 |
MS.gene060703 | MS.gene073883 | 0.839247 | 1.78E-57 | -1.69E-46 |
MS.gene060762 | MS.gene073883 | 0.860738 | 1.68E-63 | -1.69E-46 |
MS.gene060778 | MS.gene073883 | 0.895996 | 5.63E-76 | -1.69E-46 |
MS.gene06077 | MS.gene073883 | 0.924103 | 1.10E-89 | -1.69E-46 |
MS.gene060804 | MS.gene073883 | 0.809664 | 1.69E-50 | -1.69E-46 |
MS.gene060835 | MS.gene073883 | 0.860181 | 2.47E-63 | -1.69E-46 |
MS.gene060837 | MS.gene073883 | 0.812978 | 3.23E-51 | -1.69E-46 |
MS.gene06092 | MS.gene073883 | 0.867666 | 1.16E-65 | -1.69E-46 |
MS.gene06097 | MS.gene073883 | 0.863379 | 2.60E-64 | -1.69E-46 |
MS.gene060982 | MS.gene073883 | 0.890149 | 1.28E-73 | -1.69E-46 |
MS.gene061150 | MS.gene073883 | 0.860804 | 1.60E-63 | -1.69E-46 |
MS.gene061200 | MS.gene073883 | 0.813036 | 3.14E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073883.t1 | MTR_5g025270 | 96.907 | 582 | 16 | 2 | 1 | 581 | 1 | 581 | 0.0 | 1155 |
MS.gene073883.t1 | MTR_5g025230 | 82.646 | 582 | 96 | 4 | 1 | 581 | 1 | 578 | 0.0 | 986 |
MS.gene073883.t1 | MTR_5g025250 | 81.787 | 582 | 102 | 3 | 1 | 581 | 1 | 579 | 0.0 | 977 |
MS.gene073883.t1 | MTR_2g070460 | 36.644 | 584 | 333 | 15 | 24 | 577 | 32 | 608 | 4.38e-124 | 379 |
MS.gene073883.t1 | MTR_8g037315 | 38.716 | 514 | 285 | 9 | 84 | 577 | 33 | 536 | 5.29e-113 | 347 |
MS.gene073883.t1 | MTR_8g037275 | 37.475 | 499 | 283 | 9 | 100 | 577 | 81 | 571 | 4.27e-106 | 331 |
MS.gene073883.t1 | MTR_8g037290 | 37.275 | 499 | 284 | 9 | 100 | 577 | 81 | 571 | 9.68e-105 | 327 |
MS.gene073883.t1 | MTR_8g037310 | 36.434 | 516 | 299 | 10 | 83 | 577 | 64 | 571 | 1.12e-103 | 325 |
MS.gene073883.t1 | MTR_3g110195 | 28.772 | 570 | 329 | 20 | 49 | 570 | 38 | 578 | 8.65e-57 | 201 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073883.t1 | AT4G19170 | 68.214 | 560 | 150 | 6 | 29 | 578 | 54 | 595 | 0.0 | 793 |
MS.gene073883.t1 | AT3G63520 | 40.077 | 519 | 281 | 8 | 83 | 580 | 28 | 537 | 7.80e-123 | 373 |
MS.gene073883.t1 | AT1G30100 | 40.612 | 490 | 279 | 9 | 92 | 575 | 102 | 585 | 1.80e-120 | 369 |
MS.gene073883.t1 | AT3G14440 | 40.121 | 496 | 282 | 10 | 92 | 580 | 112 | 599 | 1.03e-117 | 362 |
MS.gene073883.t1 | AT4G18350 | 36.684 | 567 | 325 | 10 | 29 | 576 | 29 | 580 | 1.09e-117 | 361 |
MS.gene073883.t1 | AT1G78390 | 38.664 | 494 | 283 | 11 | 96 | 581 | 176 | 657 | 1.35e-112 | 350 |
MS.gene073883.t1 | AT3G24220 | 35.000 | 580 | 335 | 14 | 33 | 577 | 2 | 574 | 1.24e-103 | 325 |
MS.gene073883.t1 | AT2G44990 | 25.044 | 567 | 300 | 28 | 112 | 572 | 75 | 622 | 4.44e-12 | 69.3 |
MS.gene073883.t1 | AT2G44990 | 25.044 | 567 | 300 | 28 | 112 | 572 | 71 | 618 | 4.91e-12 | 69.3 |
Find 141 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCCTCTTGACATGATTTC+TGG | 0.188747 | 1.3:+26571592 | MS.gene073883:CDS |
GTTATGGGTGGTGGTGGTGG+TGG | 0.196963 | 1.3:-26570720 | None:intergenic |
ATTTGCATCAAAACGGAAAT+AGG | 0.215073 | 1.3:-26571458 | None:intergenic |
CTTGTTATTATGATGGGTTT+TGG | 0.236999 | 1.3:-26570560 | None:intergenic |
AATCCAATGCCGAAGATTTC+AGG | 0.254183 | 1.3:+26571979 | MS.gene073883:CDS |
ACACAATGTGAAATCATTAA+AGG | 0.269615 | 1.3:+26570902 | MS.gene073883:CDS |
TTTGATGGATGAGATGTTAA+AGG | 0.272209 | 1.3:-26570612 | None:intergenic |
CAGCACGAAACCTGGATTTC+GGG | 0.277585 | 1.3:+26571899 | MS.gene073883:CDS |
GTGAAGATAAATATTAAAAC+AGG | 0.290009 | 1.3:+26571853 | MS.gene073883:CDS |
CTGGATTTCGGGGTGATAAA+TGG | 0.290879 | 1.3:+26571910 | MS.gene073883:CDS |
TCAGCACGAAACCTGGATTT+CGG | 0.304408 | 1.3:+26571898 | MS.gene073883:CDS |
AATCTTGACGGCCGATTGTT+TGG | 0.307017 | 1.3:-26571333 | None:intergenic |
TGTCTGGGATTGTGATGTTT+GGG | 0.310552 | 1.3:-26570648 | None:intergenic |
TCCAGGTTTCGTGCTGATAA+TGG | 0.334748 | 1.3:-26571892 | None:intergenic |
TACAATCCTTCTAACGGAAT+TGG | 0.339439 | 1.3:+26571211 | MS.gene073883:CDS |
ACCGCAGCACGTGTCATATC+TGG | 0.342484 | 1.3:+26571184 | MS.gene073883:CDS |
GCTAAACCAATTCCGTTAGA+AGG | 0.348673 | 1.3:-26571217 | None:intergenic |
GAGGTTATGGGTGGTGGTGG+TGG | 0.353426 | 1.3:-26570723 | None:intergenic |
AACACAAGTTTGGCTTTGTT+TGG | 0.358095 | 1.3:+26571241 | MS.gene073883:CDS |
GTGTCTGGGATTGTGATGTT+TGG | 0.362352 | 1.3:-26570649 | None:intergenic |
TTGCTTACTTGTTATTATGA+TGG | 0.362595 | 1.3:-26570567 | None:intergenic |
AGGTTTGTTTATGCGGCAAT+TGG | 0.386277 | 1.3:+26571955 | MS.gene073883:CDS |
TTTGAGGTTATGGGTGGTGG+TGG | 0.388850 | 1.3:-26570726 | None:intergenic |
TGGTTTAGCCAACACAAGTT+TGG | 0.393154 | 1.3:+26571231 | MS.gene073883:CDS |
TGTTAAACATAACGATGTTC+CGG | 0.404869 | 1.3:+26571483 | MS.gene073883:CDS |
TTGAAACCAGAAAACACGTT+TGG | 0.405859 | 1.3:-26571127 | None:intergenic |
TTGATGGATGAGATGTTAAA+GGG | 0.406557 | 1.3:-26570611 | None:intergenic |
GGTGTAAGCTTGATTTCATA+AGG | 0.411021 | 1.3:-26571298 | None:intergenic |
GAAGTTGGATGTAGATTGTA+TGG | 0.425213 | 1.3:+26572033 | MS.gene073883:CDS |
TGCTTACTTGTTATTATGAT+GGG | 0.425997 | 1.3:-26570566 | None:intergenic |
GGGAGTGATGATGGTGTTTG+TGG | 0.434132 | 1.3:-26570752 | None:intergenic |
CGTGGAAGAAACTGTGGGTT+TGG | 0.439102 | 1.3:-26570968 | None:intergenic |
ACCATTATCAGCACGAAACC+TGG | 0.440073 | 1.3:+26571891 | MS.gene073883:CDS |
ACACTTCCACCGTCACTTAA+CGG | 0.447215 | 1.3:+26570926 | MS.gene073883:CDS |
CCTAAAATTGACGGCGACAC+TGG | 0.451020 | 1.3:+26571391 | MS.gene073883:CDS |
AAACCATACGGCACCCTCCT+TGG | 0.455270 | 1.3:-26572225 | None:intergenic |
TGAAACCAGAAAACACGTTT+GGG | 0.456713 | 1.3:-26571126 | None:intergenic |
ATTTCTGGTGGTTCTCCAGT+AGG | 0.459625 | 1.3:+26571607 | MS.gene073883:CDS |
TTGTATGGAGAGGATTGTTA+TGG | 0.460237 | 1.3:+26572048 | MS.gene073883:CDS |
AACGGCGCTTACATAAGAAA+TGG | 0.460728 | 1.3:+26570944 | MS.gene073883:CDS |
CATTTATCACCCCGAAATCC+AGG | 0.462433 | 1.3:-26571909 | None:intergenic |
CCGATCCATCAAAAGTTTCA+AGG | 0.463927 | 1.3:+26571632 | MS.gene073883:CDS |
ACTCCTGAAATCTTCGGCAT+TGG | 0.467844 | 1.3:-26571982 | None:intergenic |
TAACACCATTTGCATCAAAA+CGG | 0.472715 | 1.3:-26571465 | None:intergenic |
CGCGATCAATGCGTGGGATG+GGG | 0.473648 | 1.3:+26571732 | MS.gene073883:CDS |
ACGCGATCAATGCGTGGGAT+GGG | 0.477959 | 1.3:+26571731 | MS.gene073883:CDS |
TGCTCGATGGAGAGAACATT+CGG | 0.481558 | 1.3:-26571787 | None:intergenic |
GTGACGAGTCGAAGATGAAA+TGG | 0.483688 | 1.3:+26571680 | MS.gene073883:CDS |
TTATGTGCATGATGAGAAGA+AGG | 0.484903 | 1.3:+26572134 | MS.gene073883:CDS |
GTTTGCCGTTAAAATCTTGA+CGG | 0.485908 | 1.3:-26571345 | None:intergenic |
CACGCGATCAATGCGTGGGA+TGG | 0.488713 | 1.3:+26571730 | MS.gene073883:CDS |
CCTCTTGACATGATTTCTGG+TGG | 0.488783 | 1.3:+26571595 | MS.gene073883:CDS |
ATGAAATGGTTCGATGTGCC+AGG | 0.489596 | 1.3:+26571694 | MS.gene073883:CDS |
GTCGCCGGAGTTTGAGATTG+TGG | 0.494521 | 1.3:+26572188 | MS.gene073883:CDS |
ATTGTTTGGATATCACCGTT+TGG | 0.495988 | 1.3:-26571319 | None:intergenic |
AACGGTGATATCCAAACAAT+CGG | 0.496479 | 1.3:+26571322 | MS.gene073883:CDS |
AAGGGAGGGATAGAAGTTGT+TGG | 0.498248 | 1.3:-26570593 | None:intergenic |
AAAACACGTTTGGGATAAGT+TGG | 0.498794 | 1.3:-26571117 | None:intergenic |
TCCCTACGACACCGACAACT+TGG | 0.500531 | 1.3:-26572280 | None:intergenic |
TTAATGATTTCACATTGTGT+TGG | 0.501774 | 1.3:-26570899 | None:intergenic |
TTTGATGGATCGGAACCTAC+TGG | 0.501938 | 1.3:-26571622 | None:intergenic |
TTCACCACTCCTGAAATCTT+CGG | 0.504096 | 1.3:-26571988 | None:intergenic |
TACAAAATCGAAAACGAAGC+TGG | 0.505480 | 1.3:+26571091 | MS.gene073883:CDS |
AGTAATGCTGGGAGTGATGA+TGG | 0.506662 | 1.3:-26570761 | None:intergenic |
AAAGAATAGGTTTGTTTATG+CGG | 0.507283 | 1.3:+26571948 | MS.gene073883:CDS |
AAAGGAGGATGGTGAAGAAG+AGG | 0.507917 | 1.3:+26572092 | MS.gene073883:CDS |
GGTCTTGTCATGGAGAAAAC+CGG | 0.510037 | 1.3:-26571502 | None:intergenic |
GGTTTGTTTATGCGGCAATT+GGG | 0.511453 | 1.3:+26571956 | MS.gene073883:CDS |
ACTGCTCATCCTAAAATTGA+CGG | 0.512038 | 1.3:+26571382 | MS.gene073883:CDS |
ATGATTTCACATTGTGTTGG+AGG | 0.513822 | 1.3:-26570896 | None:intergenic |
GGAGTTTGAGATTGTGGCGG+AGG | 0.515266 | 1.3:+26572194 | MS.gene073883:CDS |
TGGATGAGATGTTAAAGGGA+GGG | 0.519687 | 1.3:-26570607 | None:intergenic |
CACCAAGTTGTCGGTGTCGT+AGG | 0.521647 | 1.3:+26572278 | MS.gene073883:CDS |
CACGCCATTACAATCTCAAA+CGG | 0.522637 | 1.3:+26571028 | MS.gene073883:CDS |
GCGAAATCATGAAGAAAAGA+AGG | 0.525570 | 1.3:-26571523 | None:intergenic |
ACCAAGTTGTCGGTGTCGTA+GGG | 0.528287 | 1.3:+26572279 | MS.gene073883:CDS |
CCATCAAAAGTTTCAAGGAT+CGG | 0.531863 | 1.3:+26571637 | MS.gene073883:CDS |
GGTGATCGATGCGAAGTCGC+CGG | 0.538159 | 1.3:+26572173 | MS.gene073883:CDS |
TGATTTCACATTGTGTTGGA+GGG | 0.543631 | 1.3:-26570895 | None:intergenic |
GTGTTGGAGGGAGTTCGTCT+AGG | 0.545453 | 1.3:-26570883 | None:intergenic |
TCATGCACGCGATCAATGCG+TGG | 0.547541 | 1.3:+26571725 | MS.gene073883:CDS |
GAAATCAAGCTTACACCAAA+CGG | 0.548084 | 1.3:+26571304 | MS.gene073883:CDS |
GTGTTTACGGATATTCAGCT+TGG | 0.550330 | 1.3:+26571565 | MS.gene073883:CDS |
ATTTGTAAGTTTGAACGTAA+CGG | 0.551232 | 1.3:-26571069 | None:intergenic |
TATGACACGTGCTGCGGTGA+CGG | 0.553634 | 1.3:-26571179 | None:intergenic |
GTGATAAATGGTGATTACAT+GGG | 0.557337 | 1.3:+26571922 | MS.gene073883:CDS |
GTCTGGGATTGTGATGTTTG+GGG | 0.559818 | 1.3:-26570647 | None:intergenic |
GGAGGGAGTTCGTCTAGGAC+TGG | 0.561664 | 1.3:-26570878 | None:intergenic |
TAAGCTTGATTTCATAAGGA+AGG | 0.561782 | 1.3:-26571294 | None:intergenic |
ATGGATGAGATGTTAAAGGG+AGG | 0.562849 | 1.3:-26570608 | None:intergenic |
TACCACCTCTTCGACGGTGA+TGG | 0.565615 | 1.3:+26570998 | MS.gene073883:CDS |
TATGGAGAGGATTGTTATGG+TGG | 0.566167 | 1.3:+26572051 | MS.gene073883:CDS |
ACATGTCTTGGATCTACAGA+TGG | 0.569645 | 1.3:-26570836 | None:intergenic |
GGAGGGATAGAAGTTGTTGG+TGG | 0.570969 | 1.3:-26570590 | None:intergenic |
TGCCATCACCGTCGAAGAGG+TGG | 0.571502 | 1.3:-26571000 | None:intergenic |
GAGTGACATCACCAAGTTGT+CGG | 0.571610 | 1.3:+26572269 | MS.gene073883:CDS |
TCACCGTCGAAGAGGTGGTA+AGG | 0.575068 | 1.3:-26570995 | None:intergenic |
GGTGATAAATGGTGATTACA+TGG | 0.575102 | 1.3:+26571921 | MS.gene073883:CDS |
TCCGCCACAATCTCAAACTC+CGG | 0.575111 | 1.3:-26572192 | None:intergenic |
CTTATAGCTTCTGCTGCACG+TGG | 0.575305 | 1.3:+26571154 | MS.gene073883:CDS |
AGGATGAGCAGTCATACTCA+TGG | 0.575328 | 1.3:-26571371 | None:intergenic |
AACGTAACGGCTACAGAGTG+TGG | 0.575577 | 1.3:-26571056 | None:intergenic |
GCGTGCATGATATTAAATCC+TGG | 0.576415 | 1.3:-26571712 | None:intergenic |
TATGTGCATGATGAGAAGAA+GGG | 0.578787 | 1.3:+26572135 | MS.gene073883:CDS |
AAGAAAAGAAGGTCTTGTCA+TGG | 0.578816 | 1.3:-26571512 | None:intergenic |
AAACAAAGCCAAACTTGTGT+TGG | 0.580683 | 1.3:-26571239 | None:intergenic |
TCTCTCCATCGTATGCTCGA+TGG | 0.582461 | 1.3:-26571800 | None:intergenic |
AATAATCCATGAAAACCATA+CGG | 0.583712 | 1.3:-26572237 | None:intergenic |
ATGTAAGCGCCGTTAAGTGA+CGG | 0.584811 | 1.3:-26570935 | None:intergenic |
AATGTGTTGAGTAGTAATGC+TGG | 0.590033 | 1.3:-26570773 | None:intergenic |
CCACCAGAAATCATGTCAAG+AGG | 0.590568 | 1.3:-26571595 | None:intergenic |
GATGGTGAAGAAGAGGATGA+TGG | 0.592671 | 1.3:+26572099 | MS.gene073883:CDS |
CGGAGGTGAAGTTGCCAAGG+AGG | 0.593842 | 1.3:+26572211 | MS.gene073883:CDS |
GTGGGATGGGGAAGATGATG+AGG | 0.595645 | 1.3:+26571744 | MS.gene073883:CDS |
GGAGGTGAAGTTGCCAAGGA+GGG | 0.600925 | 1.3:+26572212 | MS.gene073883:CDS |
GGACAATACAATCCTTCTAA+CGG | 0.602074 | 1.3:+26571205 | MS.gene073883:CDS |
TTGCCAAGGAGGGTGCCGTA+TGG | 0.604907 | 1.3:+26572222 | MS.gene073883:CDS |
ATGAGAAGAAGGGAGAGTCA+AGG | 0.607088 | 1.3:+26572145 | MS.gene073883:CDS |
GTGTTGAAAGGTGAGGAAGT+TGG | 0.610000 | 1.3:+26572018 | MS.gene073883:CDS |
TGGCGGAGGTGAAGTTGCCA+AGG | 0.613374 | 1.3:+26572208 | MS.gene073883:CDS |
GTGAAGATAGATGTGTTGAA+AGG | 0.624379 | 1.3:+26572006 | MS.gene073883:CDS |
GGTCCACGTGGAAGAAACTG+TGG | 0.628559 | 1.3:-26570974 | None:intergenic |
GCATGCCATCACCGTCGAAG+AGG | 0.632272 | 1.3:-26571003 | None:intergenic |
GATAGATGTGTTGAAAGGTG+AGG | 0.636429 | 1.3:+26572011 | MS.gene073883:CDS |
CATGCACGCGATCAATGCGT+GGG | 0.637360 | 1.3:+26571726 | MS.gene073883:CDS |
GGACCTTACCACCTCTTCGA+CGG | 0.645380 | 1.3:+26570992 | MS.gene073883:CDS |
TGGATGTAGATTGTATGGAG+AGG | 0.648715 | 1.3:+26572038 | MS.gene073883:CDS |
AACCCACAGTTTCTTCCACG+TGG | 0.651198 | 1.3:+26570971 | MS.gene073883:CDS |
GCCGGAGTTTGAGATTGTGG+CGG | 0.652926 | 1.3:+26572191 | MS.gene073883:CDS |
TGAAGATAAATATTAAAACA+GGG | 0.655068 | 1.3:+26571854 | MS.gene073883:CDS |
TGATAAATGGTGATTACATG+GGG | 0.658268 | 1.3:+26571923 | MS.gene073883:CDS |
AGCACGAAACCTGGATTTCG+GGG | 0.660216 | 1.3:+26571900 | MS.gene073883:CDS |
AATGCCGAAGATTTCAGGAG+TGG | 0.663954 | 1.3:+26571984 | MS.gene073883:CDS |
TCTCTCCATCGAGCATACGA+TGG | 0.671121 | 1.3:+26571795 | MS.gene073883:CDS |
TCCAGATATGACACGTGCTG+CGG | 0.676934 | 1.3:-26571185 | None:intergenic |
ATGTGTTGAGTAGTAATGCT+GGG | 0.681095 | 1.3:-26570772 | None:intergenic |
GTCCACGTGGAAGAAACTGT+GGG | 0.688234 | 1.3:-26570973 | None:intergenic |
TAAGCGCCGTTAAGTGACGG+TGG | 0.696353 | 1.3:-26570932 | None:intergenic |
ATGGTGGCATAGGACCGTAA+CGG | 0.707951 | 1.3:-26571429 | None:intergenic |
GACTCGTCACTAGCATAACG+AGG | 0.742544 | 1.3:-26571667 | None:intergenic |
AAGAGGTGGTAAGGTCCACG+TGG | 0.744047 | 1.3:-26570986 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAGATAAATATTAAAACA+GGG | + | chr1.3:26571854-26571873 | MS.gene073883:CDS | 15.0% |
!! | GTGAAGATAAATATTAAAAC+AGG | + | chr1.3:26571853-26571872 | MS.gene073883:CDS | 20.0% |
! | AAACGGAAATAGGTTAAAAA+TGG | - | chr1.3:26571451-26571470 | None:intergenic | 25.0% |
! | AATAATCCATGAAAACCATA+CGG | - | chr1.3:26572240-26572259 | None:intergenic | 25.0% |
! | ACACAATGTGAAATCATTAA+AGG | + | chr1.3:26570902-26570921 | MS.gene073883:CDS | 25.0% |
! | ATTTGTAAGTTTGAACGTAA+CGG | - | chr1.3:26571072-26571091 | None:intergenic | 25.0% |
! | TTAATGATTTCACATTGTGT+TGG | - | chr1.3:26570902-26570921 | None:intergenic | 25.0% |
!! | AAAGAATAGGTTTGTTTATG+CGG | + | chr1.3:26571948-26571967 | MS.gene073883:CDS | 25.0% |
!! | TAAAAAGTATGCTGTGTTTA+CGG | + | chr1.3:26571552-26571571 | MS.gene073883:CDS | 25.0% |
!!! | TGCTTACTTGTTATTATGAT+GGG | - | chr1.3:26570569-26570588 | None:intergenic | 25.0% |
!!! | TTGCTTACTTGTTATTATGA+TGG | - | chr1.3:26570570-26570589 | None:intergenic | 25.0% |
!!! | TTGTTATTATGATGGGTTTT+GGG | - | chr1.3:26570562-26570581 | None:intergenic | 25.0% |
!!! | TTTTCATGGATTATTTGTGA+AGG | + | chr1.3:26572245-26572264 | MS.gene073883:CDS | 25.0% |
ATTACATGGGGAAAAAGAAT+AGG | + | chr1.3:26571935-26571954 | MS.gene073883:CDS | 30.0% | |
ATTTGCATCAAAACGGAAAT+AGG | - | chr1.3:26571461-26571480 | None:intergenic | 30.0% | |
GTGATAAATGGTGATTACAT+GGG | + | chr1.3:26571922-26571941 | MS.gene073883:CDS | 30.0% | |
TAACACCATTTGCATCAAAA+CGG | - | chr1.3:26571468-26571487 | None:intergenic | 30.0% | |
TAAGCTTGATTTCATAAGGA+AGG | - | chr1.3:26571297-26571316 | None:intergenic | 30.0% | |
TGATAAATGGTGATTACATG+GGG | + | chr1.3:26571923-26571942 | MS.gene073883:CDS | 30.0% | |
TGTTAAACATAACGATGTTC+CGG | + | chr1.3:26571483-26571502 | MS.gene073883:CDS | 30.0% | |
! | GGTAACAAACTTTTTGCTTT+AGG | + | chr1.3:26571262-26571281 | MS.gene073883:CDS | 30.0% |
! | TTGATGGATGAGATGTTAAA+GGG | - | chr1.3:26570614-26570633 | None:intergenic | 30.0% |
! | TTTGATGGATGAGATGTTAA+AGG | - | chr1.3:26570615-26570634 | None:intergenic | 30.0% |
!! | CACAGCATACTTTTTAGTAA+TGG | - | chr1.3:26571548-26571567 | None:intergenic | 30.0% |
!! | TATTTCCGTTTTGATGCAAA+TGG | + | chr1.3:26571460-26571479 | MS.gene073883:CDS | 30.0% |
!! | TTTTCCGTTTGAGATTGTAA+TGG | - | chr1.3:26571035-26571054 | None:intergenic | 30.0% |
!!! | CTTGTTATTATGATGGGTTT+TGG | - | chr1.3:26570563-26570582 | None:intergenic | 30.0% |
!!! | TTGTGGTTTTTTGAGGTTAT+GGG | - | chr1.3:26570738-26570757 | None:intergenic | 30.0% |
!!! | TTTGTGGTTTTTTGAGGTTA+TGG | - | chr1.3:26570739-26570758 | None:intergenic | 30.0% |
!!! | TTTTGAGACAAAACATGTCT+TGG | - | chr1.3:26570851-26570870 | None:intergenic | 30.0% |
AAACAAAGCCAAACTTGTGT+TGG | - | chr1.3:26571242-26571261 | None:intergenic | 35.0% | |
AACGGTGATATCCAAACAAT+CGG | + | chr1.3:26571322-26571341 | MS.gene073883:CDS | 35.0% | |
AATCCTCTTGACATGATTTC+TGG | + | chr1.3:26571592-26571611 | MS.gene073883:CDS | 35.0% | |
AATGTGTTGAGTAGTAATGC+TGG | - | chr1.3:26570776-26570795 | None:intergenic | 35.0% | |
ACTGCTCATCCTAAAATTGA+CGG | + | chr1.3:26571382-26571401 | MS.gene073883:CDS | 35.0% | |
ATGATTTCACATTGTGTTGG+AGG | - | chr1.3:26570899-26570918 | None:intergenic | 35.0% | |
ATGTGTTGAGTAGTAATGCT+GGG | - | chr1.3:26570775-26570794 | None:intergenic | 35.0% | |
ATTGTTTGGATATCACCGTT+TGG | - | chr1.3:26571322-26571341 | None:intergenic | 35.0% | |
CCATCAAAAGTTTCAAGGAT+CGG | + | chr1.3:26571637-26571656 | MS.gene073883:CDS | 35.0% | |
CGGAAATAGGTTAAAAATGG+TGG | - | chr1.3:26571448-26571467 | None:intergenic | 35.0% | |
GAAATCAAGCTTACACCAAA+CGG | + | chr1.3:26571304-26571323 | MS.gene073883:CDS | 35.0% | |
GAAGTTGGATGTAGATTGTA+TGG | + | chr1.3:26572033-26572052 | MS.gene073883:CDS | 35.0% | |
GCGAAATCATGAAGAAAAGA+AGG | - | chr1.3:26571526-26571545 | None:intergenic | 35.0% | |
GGACAATACAATCCTTCTAA+CGG | + | chr1.3:26571205-26571224 | MS.gene073883:CDS | 35.0% | |
GGTGATAAATGGTGATTACA+TGG | + | chr1.3:26571921-26571940 | MS.gene073883:CDS | 35.0% | |
GGTGTAAGCTTGATTTCATA+AGG | - | chr1.3:26571301-26571320 | None:intergenic | 35.0% | |
GTGAAGATAGATGTGTTGAA+AGG | + | chr1.3:26572006-26572025 | MS.gene073883:CDS | 35.0% | |
GTTTGCCGTTAAAATCTTGA+CGG | - | chr1.3:26571348-26571367 | None:intergenic | 35.0% | |
TACAAAATCGAAAACGAAGC+TGG | + | chr1.3:26571091-26571110 | MS.gene073883:CDS | 35.0% | |
TACAATCCTTCTAACGGAAT+TGG | + | chr1.3:26571211-26571230 | MS.gene073883:CDS | 35.0% | |
TAGGTTAAAAATGGTGGCAT+AGG | - | chr1.3:26571442-26571461 | None:intergenic | 35.0% | |
TATGTGCATGATGAGAAGAA+GGG | + | chr1.3:26572135-26572154 | MS.gene073883:CDS | 35.0% | |
TGAAACCAGAAAACACGTTT+GGG | - | chr1.3:26571129-26571148 | None:intergenic | 35.0% | |
TGATTTCACATTGTGTTGGA+GGG | - | chr1.3:26570898-26570917 | None:intergenic | 35.0% | |
TTATGTGCATGATGAGAAGA+AGG | + | chr1.3:26572134-26572153 | MS.gene073883:CDS | 35.0% | |
TTGAAACCAGAAAACACGTT+TGG | - | chr1.3:26571130-26571149 | None:intergenic | 35.0% | |
TTGTATGGAGAGGATTGTTA+TGG | + | chr1.3:26572048-26572067 | MS.gene073883:CDS | 35.0% | |
! | AAAACACGTTTGGGATAAGT+TGG | - | chr1.3:26571120-26571139 | None:intergenic | 35.0% |
! | AAGAAAAGAAGGTCTTGTCA+TGG | - | chr1.3:26571515-26571534 | None:intergenic | 35.0% |
! | GAAACTTTTGCTTTCCGTTA+CGG | + | chr1.3:26571415-26571434 | MS.gene073883:CDS | 35.0% |
!! | AACACAAGTTTGGCTTTGTT+TGG | + | chr1.3:26571241-26571260 | MS.gene073883:CDS | 35.0% |
!! | CCTTGAAACTTTTGATGGAT+CGG | - | chr1.3:26571635-26571654 | None:intergenic | 35.0% |
!! | TGATGTTTGGGGTTTTTCTT+TGG | - | chr1.3:26570639-26570658 | None:intergenic | 35.0% |
!! | TTTTATTGGTGGGTCTATGA+AGG | - | chr1.3:26570816-26570835 | None:intergenic | 35.0% |
!!! | ATGGTGTTTGTGGTTTTTTG+AGG | - | chr1.3:26570745-26570764 | None:intergenic | 35.0% |
!!! | CTACAGATGGTTTTATTGGT+GGG | - | chr1.3:26570826-26570845 | None:intergenic | 35.0% |
!!! | GGATCTACAGATGGTTTTAT+TGG | - | chr1.3:26570830-26570849 | None:intergenic | 35.0% |
!!! | GGGTTTTTCTTTGGTTTTGA+TGG | - | chr1.3:26570630-26570649 | None:intergenic | 35.0% |
!!! | TCTACAGATGGTTTTATTGG+TGG | - | chr1.3:26570827-26570846 | None:intergenic | 35.0% |
AACGGCGCTTACATAAGAAA+TGG | + | chr1.3:26570944-26570963 | MS.gene073883:CDS | 40.0% | |
AATCCAATGCCGAAGATTTC+AGG | + | chr1.3:26571979-26571998 | MS.gene073883:CDS | 40.0% | |
ACATGTCTTGGATCTACAGA+TGG | - | chr1.3:26570839-26570858 | None:intergenic | 40.0% | |
ATGGATGAGATGTTAAAGGG+AGG | - | chr1.3:26570611-26570630 | None:intergenic | 40.0% | |
CACGCCATTACAATCTCAAA+CGG | + | chr1.3:26571028-26571047 | MS.gene073883:CDS | 40.0% | |
CCGATCCATCAAAAGTTTCA+AGG | + | chr1.3:26571632-26571651 | MS.gene073883:CDS | 40.0% | |
GATAGATGTGTTGAAAGGTG+AGG | + | chr1.3:26572011-26572030 | MS.gene073883:CDS | 40.0% | |
GCGTGCATGATATTAAATCC+TGG | - | chr1.3:26571715-26571734 | None:intergenic | 40.0% | |
GCTAAACCAATTCCGTTAGA+AGG | - | chr1.3:26571220-26571239 | None:intergenic | 40.0% | |
GTGTTTACGGATATTCAGCT+TGG | + | chr1.3:26571565-26571584 | MS.gene073883:CDS | 40.0% | |
TATGGAGAGGATTGTTATGG+TGG | + | chr1.3:26572051-26572070 | MS.gene073883:CDS | 40.0% | |
TGGATGAGATGTTAAAGGGA+GGG | - | chr1.3:26570610-26570629 | None:intergenic | 40.0% | |
TGGATGTAGATTGTATGGAG+AGG | + | chr1.3:26572038-26572057 | MS.gene073883:CDS | 40.0% | |
TGGTTTAGCCAACACAAGTT+TGG | + | chr1.3:26571231-26571250 | MS.gene073883:CDS | 40.0% | |
TTCACCACTCCTGAAATCTT+CGG | - | chr1.3:26571991-26572010 | None:intergenic | 40.0% | |
! | AGGTTTGTTTATGCGGCAAT+TGG | + | chr1.3:26571955-26571974 | MS.gene073883:CDS | 40.0% |
! | ATCGGCCGTCAAGATTTTAA+CGG | + | chr1.3:26571340-26571359 | MS.gene073883:CDS | 40.0% |
! | CCGATCCTTGAAACTTTTGA+TGG | - | chr1.3:26571640-26571659 | None:intergenic | 40.0% |
! | CTTATCCCAAACGTGTTTTC+TGG | + | chr1.3:26571121-26571140 | MS.gene073883:CDS | 40.0% |
! | GGTGTAGGAAGAGTTTTTGT+GGG | - | chr1.3:26570698-26570717 | None:intergenic | 40.0% |
! | GGTTTGTTTATGCGGCAATT+GGG | + | chr1.3:26571956-26571975 | MS.gene073883:CDS | 40.0% |
! | GTGTAGGAAGAGTTTTTGTG+GGG | - | chr1.3:26570697-26570716 | None:intergenic | 40.0% |
! | TGTAGGAAGAGTTTTTGTGG+GGG | - | chr1.3:26570696-26570715 | None:intergenic | 40.0% |
! | TGTCTGGGATTGTGATGTTT+GGG | - | chr1.3:26570651-26570670 | None:intergenic | 40.0% |
!!! | TGGTTTTTTGAGGTTATGGG+TGG | - | chr1.3:26570735-26570754 | None:intergenic | 40.0% |
!!! | TTTTTTGAGGTTATGGGTGG+TGG | - | chr1.3:26570732-26570751 | None:intergenic | 40.0% |
AAAGGAGGATGGTGAAGAAG+AGG | + | chr1.3:26572092-26572111 | MS.gene073883:CDS | 45.0% | |
AAGGGAGGGATAGAAGTTGT+TGG | - | chr1.3:26570596-26570615 | None:intergenic | 45.0% | |
AATCTTGACGGCCGATTGTT+TGG | - | chr1.3:26571336-26571355 | None:intergenic | 45.0% | |
AATGCCGAAGATTTCAGGAG+TGG | + | chr1.3:26571984-26572003 | MS.gene073883:CDS | 45.0% | |
ACACTTCCACCGTCACTTAA+CGG | + | chr1.3:26570926-26570945 | MS.gene073883:CDS | 45.0% | |
ACCATTATCAGCACGAAACC+TGG | + | chr1.3:26571891-26571910 | MS.gene073883:CDS | 45.0% | |
ACTCCTGAAATCTTCGGCAT+TGG | - | chr1.3:26571985-26572004 | None:intergenic | 45.0% | |
AGGATGAGCAGTCATACTCA+TGG | - | chr1.3:26571374-26571393 | None:intergenic | 45.0% | |
AGTAATGCTGGGAGTGATGA+TGG | - | chr1.3:26570764-26570783 | None:intergenic | 45.0% | |
ATGAAATGGTTCGATGTGCC+AGG | + | chr1.3:26571694-26571713 | MS.gene073883:CDS | 45.0% | |
ATGAGAAGAAGGGAGAGTCA+AGG | + | chr1.3:26572145-26572164 | MS.gene073883:CDS | 45.0% | |
CATTTATCACCCCGAAATCC+AGG | - | chr1.3:26571912-26571931 | None:intergenic | 45.0% | |
CCACCAGAAATCATGTCAAG+AGG | - | chr1.3:26571598-26571617 | None:intergenic | 45.0% | |
CTGGATTTCGGGGTGATAAA+TGG | + | chr1.3:26571910-26571929 | MS.gene073883:CDS | 45.0% | |
GAGTGACATCACCAAGTTGT+CGG | + | chr1.3:26572269-26572288 | MS.gene073883:CDS | 45.0% | |
GATGGTGAAGAAGAGGATGA+TGG | + | chr1.3:26572099-26572118 | MS.gene073883:CDS | 45.0% | |
GTGACGAGTCGAAGATGAAA+TGG | + | chr1.3:26571680-26571699 | MS.gene073883:CDS | 45.0% | |
GTGTTGAAAGGTGAGGAAGT+TGG | + | chr1.3:26572018-26572037 | MS.gene073883:CDS | 45.0% | |
TCAGCACGAAACCTGGATTT+CGG | + | chr1.3:26571898-26571917 | MS.gene073883:CDS | 45.0% | |
TCCTCCTTTGCCACGAAAAA+CGG | - | chr1.3:26572081-26572100 | None:intergenic | 45.0% | |
TGCTCGATGGAGAGAACATT+CGG | - | chr1.3:26571790-26571809 | None:intergenic | 45.0% | |
! | ATGTAAGCGCCGTTAAGTGA+CGG | - | chr1.3:26570938-26570957 | None:intergenic | 45.0% |
! | CCTCTTGACATGATTTCTGG+TGG | + | chr1.3:26571595-26571614 | MS.gene073883:CDS | 45.0% |
! | GAAGGGAGAGTCAAGGTTTT+TGG | + | chr1.3:26572152-26572171 | MS.gene073883:CDS | 45.0% |
! | GGGTGTAGGAAGAGTTTTTG+TGG | - | chr1.3:26570699-26570718 | None:intergenic | 45.0% |
! | GGTCTTGTCATGGAGAAAAC+CGG | - | chr1.3:26571505-26571524 | None:intergenic | 45.0% |
! | GTAGGAAGAGTTTTTGTGGG+GGG | - | chr1.3:26570695-26570714 | None:intergenic | 45.0% |
! | GTCTGGGATTGTGATGTTTG+GGG | - | chr1.3:26570650-26570669 | None:intergenic | 45.0% |
! | GTGTCTGGGATTGTGATGTT+TGG | - | chr1.3:26570652-26570671 | None:intergenic | 45.0% |
! | TCCAGGTTTCGTGCTGATAA+TGG | - | chr1.3:26571895-26571914 | None:intergenic | 45.0% |
! | TTTGATGGATCGGAACCTAC+TGG | - | chr1.3:26571625-26571644 | None:intergenic | 45.0% |
! | TTTTTCGTGGCAAAGGAGGA+TGG | + | chr1.3:26572081-26572100 | MS.gene073883:CDS | 45.0% |
!! | ATTTCTGGTGGTTCTCCAGT+AGG | + | chr1.3:26571607-26571626 | MS.gene073883:CDS | 45.0% |
!!! | GGTGGTGGTTTTTAGTGTCT+GGG | - | chr1.3:26570666-26570685 | None:intergenic | 45.0% |
!!! | TGGTGGTGGTTTTTAGTGTC+TGG | - | chr1.3:26570667-26570686 | None:intergenic | 45.0% |
AACCCACAGTTTCTTCCACG+TGG | + | chr1.3:26570971-26570990 | MS.gene073883:CDS | 50.0% | |
AACGTAACGGCTACAGAGTG+TGG | - | chr1.3:26571059-26571078 | None:intergenic | 50.0% | |
AGCACGAAACCTGGATTTCG+GGG | + | chr1.3:26571900-26571919 | MS.gene073883:CDS | 50.0% | |
ATGGTGGCATAGGACCGTAA+CGG | - | chr1.3:26571432-26571451 | None:intergenic | 50.0% | |
CAGCACGAAACCTGGATTTC+GGG | + | chr1.3:26571899-26571918 | MS.gene073883:CDS | 50.0% | |
CCTAAAATTGACGGCGACAC+TGG | + | chr1.3:26571391-26571410 | MS.gene073883:CDS | 50.0% | |
CGTGGAAGAAACTGTGGGTT+TGG | - | chr1.3:26570971-26570990 | None:intergenic | 50.0% | |
CTTATAGCTTCTGCTGCACG+TGG | + | chr1.3:26571154-26571173 | MS.gene073883:CDS | 50.0% | |
GACTCGTCACTAGCATAACG+AGG | - | chr1.3:26571670-26571689 | None:intergenic | 50.0% | |
GGAGGGATAGAAGTTGTTGG+TGG | - | chr1.3:26570593-26570612 | None:intergenic | 50.0% | |
GTCCACGTGGAAGAAACTGT+GGG | - | chr1.3:26570976-26570995 | None:intergenic | 50.0% | |
TCCAGATATGACACGTGCTG+CGG | - | chr1.3:26571188-26571207 | None:intergenic | 50.0% | |
TCCGCCACAATCTCAAACTC+CGG | - | chr1.3:26572195-26572214 | None:intergenic | 50.0% | |
TCTCTCCATCGAGCATACGA+TGG | + | chr1.3:26571795-26571814 | MS.gene073883:CDS | 50.0% | |
TCTCTCCATCGTATGCTCGA+TGG | - | chr1.3:26571803-26571822 | None:intergenic | 50.0% | |
! | CCAGTGTCGCCGTCAATTTT+AGG | - | chr1.3:26571394-26571413 | None:intergenic | 50.0% |
! | TTTGAGGTTATGGGTGGTGG+TGG | - | chr1.3:26570729-26570748 | None:intergenic | 50.0% |
!! | AGTTTTTGTGGGGGGTGTAG+TGG | - | chr1.3:26570687-26570706 | None:intergenic | 50.0% |
!! | GGGAGTGATGATGGTGTTTG+TGG | - | chr1.3:26570755-26570774 | None:intergenic | 50.0% |
!!! | AGGGTGCCGTATGGTTTTCA+TGG | + | chr1.3:26572231-26572250 | MS.gene073883:CDS | 50.0% |
!!! | TGAGCCGTTTTTCGTGGCAA+AGG | + | chr1.3:26572074-26572093 | MS.gene073883:CDS | 50.0% |
AAACCATACGGCACCCTCCT+TGG | - | chr1.3:26572228-26572247 | None:intergenic | 55.0% | |
AAGAGGTGGTAAGGTCCACG+TGG | - | chr1.3:26570989-26571008 | None:intergenic | 55.0% | |
ACCGCAGCACGTGTCATATC+TGG | + | chr1.3:26571184-26571203 | MS.gene073883:CDS | 55.0% | |
ACGCGATCAATGCGTGGGAT+GGG | + | chr1.3:26571731-26571750 | MS.gene073883:CDS | 55.0% | |
CATGCACGCGATCAATGCGT+GGG | + | chr1.3:26571726-26571745 | MS.gene073883:CDS | 55.0% | |
GGACCTTACCACCTCTTCGA+CGG | + | chr1.3:26570992-26571011 | MS.gene073883:CDS | 55.0% | |
GGAGGTGAAGTTGCCAAGGA+GGG | + | chr1.3:26572212-26572231 | MS.gene073883:CDS | 55.0% | |
GGTCCACGTGGAAGAAACTG+TGG | - | chr1.3:26570977-26570996 | None:intergenic | 55.0% | |
GTGGGATGGGGAAGATGATG+AGG | + | chr1.3:26571744-26571763 | MS.gene073883:CDS | 55.0% | |
GTGTTGGAGGGAGTTCGTCT+AGG | - | chr1.3:26570886-26570905 | None:intergenic | 55.0% | |
TACCACCTCTTCGACGGTGA+TGG | + | chr1.3:26570998-26571017 | MS.gene073883:CDS | 55.0% | |
TATGACACGTGCTGCGGTGA+CGG | - | chr1.3:26571182-26571201 | None:intergenic | 55.0% | |
TCACCGTCGAAGAGGTGGTA+AGG | - | chr1.3:26570998-26571017 | None:intergenic | 55.0% | |
TCATGCACGCGATCAATGCG+TGG | + | chr1.3:26571725-26571744 | MS.gene073883:CDS | 55.0% | |
! | GCCGGAGTTTGAGATTGTGG+CGG | + | chr1.3:26572191-26572210 | MS.gene073883:CDS | 55.0% |
! | GGAGTTTGAGATTGTGGCGG+AGG | + | chr1.3:26572194-26572213 | MS.gene073883:CDS | 55.0% |
! | GTCGCCGGAGTTTGAGATTG+TGG | + | chr1.3:26572188-26572207 | MS.gene073883:CDS | 55.0% |
! | TAAGCGCCGTTAAGTGACGG+TGG | - | chr1.3:26570935-26570954 | None:intergenic | 55.0% |
!! | TTATGGGTGGTGGTGGTGGT+GGG | - | chr1.3:26570722-26570741 | None:intergenic | 55.0% |
!! | TTTTGTGGGGGGTGTAGTGG+TGG | - | chr1.3:26570684-26570703 | None:intergenic | 55.0% |
!!! | GCCGTTTTTCGTGGCAAAGG+AGG | + | chr1.3:26572077-26572096 | MS.gene073883:CDS | 55.0% |
!!! | TGGTGGTGAGCCGTTTTTCG+TGG | + | chr1.3:26572068-26572087 | MS.gene073883:CDS | 55.0% |
CACGCGATCAATGCGTGGGA+TGG | + | chr1.3:26571730-26571749 | MS.gene073883:CDS | 60.0% | |
CGCGATCAATGCGTGGGATG+GGG | + | chr1.3:26571732-26571751 | MS.gene073883:CDS | 60.0% | |
CGGAGGTGAAGTTGCCAAGG+AGG | + | chr1.3:26572211-26572230 | MS.gene073883:CDS | 60.0% | |
GCATGCCATCACCGTCGAAG+AGG | - | chr1.3:26571006-26571025 | None:intergenic | 60.0% | |
GGTGATCGATGCGAAGTCGC+CGG | + | chr1.3:26572173-26572192 | MS.gene073883:CDS | 60.0% | |
TGCCATCACCGTCGAAGAGG+TGG | - | chr1.3:26571003-26571022 | None:intergenic | 60.0% | |
TGGCGGAGGTGAAGTTGCCA+AGG | + | chr1.3:26572208-26572227 | MS.gene073883:CDS | 60.0% | |
! | GGAGGGAGTTCGTCTAGGAC+TGG | - | chr1.3:26570881-26570900 | None:intergenic | 60.0% |
!! | GAGGTTATGGGTGGTGGTGG+TGG | - | chr1.3:26570726-26570745 | None:intergenic | 60.0% |
!! | GTTATGGGTGGTGGTGGTGG+TGG | - | chr1.3:26570723-26570742 | None:intergenic | 60.0% |
!! | TATGGGTGGTGGTGGTGGTG+GGG | - | chr1.3:26570721-26570740 | None:intergenic | 60.0% |
!! | TTGCCAAGGAGGGTGCCGTA+TGG | + | chr1.3:26572222-26572241 | MS.gene073883:CDS | 60.0% |
! | TGTGGGGGGTGTAGTGGTGG+TGG | - | chr1.3:26570681-26570700 | None:intergenic | 65.0% |
!! | ATGGGTGGTGGTGGTGGTGG+GGG | - | chr1.3:26570720-26570739 | None:intergenic | 65.0% |
!! | GTGGTGGTGGTGGGGGGTGT+AGG | - | chr1.3:26570713-26570732 | None:intergenic | 70.0% |
!! | TGGGTGGTGGTGGTGGTGGG+GGG | - | chr1.3:26570719-26570738 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 26570554 | 26572299 | 26570554 | ID=MS.gene073883 |
chr1.3 | mRNA | 26570554 | 26572299 | 26570554 | ID=MS.gene073883.t1;Parent=MS.gene073883 |
chr1.3 | exon | 26570554 | 26572299 | 26570554 | ID=MS.gene073883.t1.exon1;Parent=MS.gene073883.t1 |
chr1.3 | CDS | 26570554 | 26572299 | 26570554 | ID=cds.MS.gene073883.t1;Parent=MS.gene073883.t1 |
Gene Sequence |
Protein sequence |