Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84011.t1 | XP_013467369.1 | 97.8 | 414 | 9 | 0 | 1 | 414 | 1 | 414 | 4.40E-216 | 760.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84011.t1 | F4IZC4 | 62.8 | 363 | 130 | 2 | 53 | 413 | 74 | 433 | 1.6e-118 | 427.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84011.t1 | A0A072VIJ8 | 97.8 | 414 | 9 | 0 | 1 | 414 | 1 | 414 | 3.2e-216 | 760.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene84011 | 0.896586 | 3.20E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene84011 | 0.824814 | 6.58E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene84011 | 0.861204 | 1.21E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene84011 | 0.883709 | 3.57E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene84011 | 0.887106 | 1.91E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene84011 | 0.895041 | 1.40E-75 | -1.69E-46 |
| MS.gene049320 | MS.gene84011 | 0.884989 | 1.20E-71 | -1.69E-46 |
| MS.gene04939 | MS.gene84011 | 0.817568 | 3.08E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene84011 | 0.845714 | 3.42E-59 | -1.69E-46 |
| MS.gene049627 | MS.gene84011 | 0.856894 | 2.36E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene84011 | 0.84791 | 8.57E-60 | -1.69E-46 |
| MS.gene049657 | MS.gene84011 | 0.80673 | 7.14E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene84011 | 0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene84011 | 0.818476 | 1.92E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene84011 | 0.912693 | 1.45E-83 | -1.69E-46 |
| MS.gene050163 | MS.gene84011 | 0.869281 | 3.48E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene84011 | 0.871994 | 4.47E-67 | -1.69E-46 |
| MS.gene050170 | MS.gene84011 | 0.874102 | 8.78E-68 | -1.69E-46 |
| MS.gene050216 | MS.gene84011 | 0.87047 | 1.42E-66 | -1.69E-46 |
| MS.gene050323 | MS.gene84011 | 0.866854 | 2.10E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene84011 | 0.872226 | 3.74E-67 | -1.69E-46 |
| MS.gene050381 | MS.gene84011 | -0.822887 | 1.86E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene84011 | 0.80592 | 1.06E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene84011 | 0.863149 | 3.06E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene84011 | 0.915449 | 5.81E-85 | -1.69E-46 |
| MS.gene050518 | MS.gene84011 | 0.879818 | 9.13E-70 | -1.69E-46 |
| MS.gene050577 | MS.gene84011 | 0.854942 | 8.80E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene84011 | 0.900365 | 7.88E-78 | -1.69E-46 |
| MS.gene050662 | MS.gene84011 | 0.818838 | 1.59E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene84011 | 0.875513 | 2.90E-68 | -1.69E-46 |
| MS.gene050699 | MS.gene84011 | 0.874843 | 4.92E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene84011 | 0.838391 | 2.96E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene84011 | 0.877358 | 6.70E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene84011 | 0.85395 | 1.70E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene84011 | 0.884796 | 1.41E-71 | -1.69E-46 |
| MS.gene050871 | MS.gene84011 | 0.883838 | 3.20E-71 | -1.69E-46 |
| MS.gene050876 | MS.gene84011 | 0.869405 | 3.17E-66 | -1.69E-46 |
| MS.gene05087 | MS.gene84011 | 0.832214 | 1.07E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene84011 | -0.808251 | 3.39E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene84011 | 0.875164 | 3.82E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene84011 | 0.8258 | 3.85E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene84011 | 0.902691 | 7.48E-79 | -1.69E-46 |
| MS.gene05100 | MS.gene84011 | 0.845372 | 4.23E-59 | -1.69E-46 |
| MS.gene051268 | MS.gene84011 | 0.847391 | 1.19E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene84011 | 0.842309 | 2.80E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene84011 | -0.808787 | 2.61E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene84011 | -0.806129 | 9.56E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene84011 | 0.8368 | 7.57E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene84011 | 0.876926 | 9.46E-69 | -1.69E-46 |
| MS.gene051666 | MS.gene84011 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene84011 | 0.811742 | 6.01E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene84011 | 0.829413 | 5.22E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene84011 | 0.802389 | 5.74E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene84011 | 0.829736 | 4.36E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene84011 | 0.815469 | 9.10E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene84011 | 0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene84011 | 0.899212 | 2.48E-77 | -1.69E-46 |
| MS.gene052271 | MS.gene84011 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene84011 | 0.879344 | 1.35E-69 | -1.69E-46 |
| MS.gene052486 | MS.gene84011 | 0.883528 | 4.16E-71 | -1.69E-46 |
| MS.gene052503 | MS.gene84011 | 0.837201 | 5.98E-57 | -1.69E-46 |
| MS.gene052504 | MS.gene84011 | 0.827824 | 1.26E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene84011 | 0.841598 | 4.31E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene84011 | 0.82019 | 7.82E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene84011 | 0.817733 | 2.83E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene84011 | 0.848881 | 4.62E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene84011 | 0.8329 | 7.26E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene84011 | 0.829149 | 6.05E-55 | -1.69E-46 |
| MS.gene052916 | MS.gene84011 | 0.819383 | 1.20E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene84011 | 0.880646 | 4.62E-70 | -1.69E-46 |
| MS.gene053117 | MS.gene84011 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene84011 | 0.87264 | 2.72E-67 | -1.69E-46 |
| MS.gene053207 | MS.gene84011 | 0.839431 | 1.59E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene84011 | 0.861444 | 1.02E-63 | -1.69E-46 |
| MS.gene053284 | MS.gene84011 | 0.809449 | 1.88E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene84011 | 0.862438 | 5.07E-64 | -1.69E-46 |
| MS.gene053420 | MS.gene84011 | -0.828874 | 7.05E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene84011 | 0.844868 | 5.79E-59 | -1.69E-46 |
| MS.gene053480 | MS.gene84011 | 0.832762 | 7.85E-56 | -1.69E-46 |
| MS.gene053549 | MS.gene84011 | -0.818219 | 2.20E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene84011 | 0.855581 | 5.73E-62 | -1.69E-46 |
| MS.gene053626 | MS.gene84011 | 0.85994 | 2.92E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene84011 | 0.861046 | 1.35E-63 | -1.69E-46 |
| MS.gene053633 | MS.gene84011 | 0.832329 | 1.01E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene84011 | 0.855959 | 4.44E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene84011 | 0.855022 | 8.34E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene84011 | 0.833661 | 4.69E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene84011 | 0.819246 | 1.28E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene84011 | 0.879866 | 8.78E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene84011 | 0.864095 | 1.56E-64 | -1.69E-46 |
| MS.gene054616 | MS.gene84011 | -0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene84011 | 0.86816 | 8.03E-66 | -1.69E-46 |
| MS.gene054706 | MS.gene84011 | -0.80604 | 9.98E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene84011 | 0.867475 | 1.33E-65 | -1.69E-46 |
| MS.gene054927 | MS.gene84011 | 0.820795 | 5.68E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene84011 | 0.909099 | 8.28E-82 | -1.69E-46 |
| MS.gene05505 | MS.gene84011 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene84011 | -0.819301 | 1.25E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene84011 | 0.820466 | 6.76E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene84011 | 0.906108 | 2.11E-80 | -1.69E-46 |
| MS.gene055502 | MS.gene84011 | 0.885177 | 1.02E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene84011 | 0.878794 | 2.11E-69 | -1.69E-46 |
| MS.gene055634 | MS.gene84011 | 0.838385 | 2.97E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene84011 | 0.826657 | 2.40E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene84011 | 0.841851 | 3.70E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene84011 | 0.859716 | 3.41E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene84011 | 0.861273 | 1.15E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene84011 | 0.867473 | 1.33E-65 | -1.69E-46 |
| MS.gene055776 | MS.gene84011 | 0.880169 | 6.85E-70 | -1.69E-46 |
| MS.gene055849 | MS.gene84011 | 0.836618 | 8.42E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene84011 | 0.877343 | 6.78E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene84011 | 0.832312 | 1.02E-55 | -1.69E-46 |
| MS.gene055954 | MS.gene84011 | 0.80431 | 2.30E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene84011 | 0.815048 | 1.13E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene84011 | 0.848756 | 5.00E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene84011 | 0.806913 | 6.53E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene84011 | 0.81282 | 3.50E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene84011 | -0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene84011 | 0.840807 | 6.96E-58 | -1.69E-46 |
| MS.gene056409 | MS.gene84011 | 0.841528 | 4.50E-58 | -1.69E-46 |
| MS.gene056449 | MS.gene84011 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene84011 | 0.858941 | 5.83E-63 | -1.69E-46 |
| MS.gene056504 | MS.gene84011 | 0.910867 | 1.16E-82 | -1.69E-46 |
| MS.gene056510 | MS.gene84011 | 0.894937 | 1.54E-75 | -1.69E-46 |
| MS.gene056550 | MS.gene84011 | -0.803055 | 4.18E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene84011 | 0.829635 | 4.61E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene84011 | 0.882399 | 1.08E-70 | -1.69E-46 |
| MS.gene056692 | MS.gene84011 | 0.830401 | 3.00E-55 | -1.69E-46 |
| MS.gene056878 | MS.gene84011 | 0.895804 | 6.77E-76 | -1.69E-46 |
| MS.gene056898 | MS.gene84011 | 0.825605 | 4.28E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene84011 | -0.810288 | 1.24E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene84011 | 0.81143 | 7.03E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene84011 | 0.814173 | 1.76E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene84011 | 0.840065 | 1.09E-57 | -1.69E-46 |
| MS.gene057687 | MS.gene84011 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene84011 | 0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene84011 | 0.841087 | 5.88E-58 | -1.69E-46 |
| MS.gene057857 | MS.gene84011 | 0.81287 | 3.41E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene84011 | 0.813819 | 2.11E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene84011 | 0.834833 | 2.38E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene84011 | 0.807372 | 5.22E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene84011 | 0.826713 | 2.33E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene84011 | -0.814519 | 1.48E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene84011 | -0.811483 | 6.85E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene84011 | 0.814787 | 1.29E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene84011 | -0.824045 | 9.98E-54 | -1.69E-46 |
| MS.gene058335 | MS.gene84011 | 0.811297 | 7.51E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene84011 | 0.840366 | 9.08E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene84011 | 0.853478 | 2.33E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene84011 | 0.882973 | 6.64E-71 | -1.69E-46 |
| MS.gene058544 | MS.gene84011 | 0.837024 | 6.63E-57 | -1.69E-46 |
| MS.gene058719 | MS.gene84011 | 0.818339 | 2.06E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene84011 | 0.827798 | 1.28E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene84011 | 0.903372 | 3.71E-79 | -1.69E-46 |
| MS.gene058838 | MS.gene84011 | 0.849391 | 3.33E-60 | -1.69E-46 |
| MS.gene058978 | MS.gene84011 | -0.816482 | 5.41E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene84011 | 0.916066 | 2.78E-85 | -1.69E-46 |
| MS.gene059023 | MS.gene84011 | 0.871501 | 6.52E-67 | -1.69E-46 |
| MS.gene059034 | MS.gene84011 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene84011 | 0.836965 | 6.87E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene84011 | 0.844402 | 7.73E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene84011 | 0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene84011 | 0.895411 | 9.83E-76 | -1.69E-46 |
| MS.gene059718 | MS.gene84011 | 0.891927 | 2.54E-74 | -1.69E-46 |
| MS.gene059756 | MS.gene84011 | 0.844916 | 5.62E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene84011 | 0.848784 | 4.91E-60 | -1.69E-46 |
| MS.gene059837 | MS.gene84011 | 0.850207 | 1.97E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene84011 | 0.888414 | 6.03E-73 | -1.69E-46 |
| MS.gene059902 | MS.gene84011 | 0.82505 | 5.79E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene84011 | 0.848745 | 5.04E-60 | -1.69E-46 |
| MS.gene060295 | MS.gene84011 | 0.806647 | 7.43E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene84011 | -0.801582 | 8.41E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene84011 | 0.854509 | 1.17E-61 | -1.69E-46 |
| MS.gene060526 | MS.gene84011 | 0.801875 | 7.32E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene84011 | -0.842786 | 2.09E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene84011 | 0.865637 | 5.11E-65 | -1.69E-46 |
| MS.gene060762 | MS.gene84011 | 0.885421 | 8.25E-72 | -1.69E-46 |
| MS.gene060778 | MS.gene84011 | 0.892189 | 2.00E-74 | -1.69E-46 |
| MS.gene06077 | MS.gene84011 | 0.898378 | 5.62E-77 | -1.69E-46 |
| MS.gene06092 | MS.gene84011 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene06097 | MS.gene84011 | 0.806045 | 9.95E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene84011 | 0.88132 | 2.65E-70 | -1.69E-46 |
| MS.gene061134 | MS.gene84011 | 0.810313 | 1.23E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene84011 | 0.849345 | 3.43E-60 | -1.69E-46 |
| MS.gene061171 | MS.gene84011 | 0.845772 | 3.30E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84011.t1 | MTR_1g050462 | 97.826 | 414 | 9 | 0 | 1 | 414 | 1 | 414 | 0.0 | 795 |
| MS.gene84011.t1 | MTR_1g050462 | 96.010 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 0.0 | 729 |
| MS.gene84011.t1 | MTR_1g050462 | 96.530 | 317 | 11 | 0 | 1 | 317 | 1 | 317 | 0.0 | 602 |
| MS.gene84011.t1 | MTR_1g050462 | 93.258 | 267 | 18 | 0 | 1 | 267 | 1 | 267 | 3.27e-175 | 490 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84011.t1 | AT3G56160 | 63.661 | 366 | 128 | 3 | 51 | 414 | 47 | 409 | 1.90e-149 | 430 |
| MS.gene84011.t1 | AT3G56160 | 63.388 | 366 | 127 | 4 | 53 | 414 | 74 | 436 | 1.26e-146 | 424 |
| MS.gene84011.t1 | AT3G56160 | 62.866 | 307 | 111 | 1 | 51 | 357 | 47 | 350 | 1.29e-121 | 357 |
| MS.gene84011.t1 | AT3G56160 | 64.639 | 263 | 91 | 1 | 53 | 313 | 74 | 336 | 5.17e-104 | 311 |
| MS.gene84011.t1 | AT3G56160 | 60.000 | 215 | 86 | 0 | 51 | 265 | 47 | 261 | 2.14e-74 | 235 |
Find 110 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATATCATGTATCCAAAAT+TGG | 0.149667 | 1.3:-32103106 | MS.gene84011:CDS |
| AATTCCAAACGGCCCAATTT+TGG | 0.174825 | 1.3:+32103093 | None:intergenic |
| GCATGGCCTGTTGGACTCTT+TGG | 0.175566 | 1.3:-32102908 | MS.gene84011:CDS |
| CAATTACCTTTCCCAAAATA+AGG | 0.180711 | 1.3:+32098775 | None:intergenic |
| ACTTCTTCATCTGACCTTAT+TGG | 0.189310 | 1.3:-32094650 | MS.gene84011:CDS |
| TCCCCTAGCAAAGCTCAAAA+TGG | 0.257228 | 1.3:+32103643 | None:intergenic |
| TGTGGTGCATTTGGAGAATC+TGG | 0.261628 | 1.3:-32094322 | MS.gene84011:CDS |
| ATTTGGAGAATCTGGGTTAC+TGG | 0.268679 | 1.3:-32094314 | MS.gene84011:CDS |
| ACTTTGATTCTGCAGCTTGC+TGG | 0.286403 | 1.3:-32100596 | MS.gene84011:intron |
| GTGGCGTGAGGATGAGTAAA+TGG | 0.299448 | 1.3:+32103855 | None:intergenic |
| CAACCCCAAGAATTTATTAC+AGG | 0.300555 | 1.3:-32101203 | MS.gene84011:intron |
| CGGGAAGAAGGGGAAAATAG+AGG | 0.303301 | 1.3:+32103806 | None:intergenic |
| CTAAACCTGTAATAAATTCT+TGG | 0.309750 | 1.3:+32101198 | None:intergenic |
| CATGGCCTGTTGGACTCTTT+GGG | 0.310381 | 1.3:-32102907 | MS.gene84011:CDS |
| AATTACCTTTCCCAAAATAA+GGG | 0.315621 | 1.3:+32098776 | None:intergenic |
| TCTATAACCGCTACCATTAC+TGG | 0.327775 | 1.3:+32094352 | None:intergenic |
| GAGCCACTTTGTGGTGCATT+TGG | 0.332991 | 1.3:-32094331 | MS.gene84011:CDS |
| TAAACCTGTAATAAATTCTT+GGG | 0.340341 | 1.3:+32101199 | None:intergenic |
| ATGGCGAGGGCGGGAAGAAG+GGG | 0.347970 | 1.3:+32103796 | None:intergenic |
| GTATCCAAAATTGGGCCGTT+TGG | 0.365828 | 1.3:-32103097 | MS.gene84011:CDS |
| GCGTAGAGTGAGGGATTTAA+TGG | 0.367506 | 1.3:+32103763 | None:intergenic |
| CTGATTTCTGCGGTGACGTT+AGG | 0.368875 | 1.3:-32103163 | MS.gene84011:CDS |
| TTAAGCCACCTTGACATTGC+CGG | 0.369195 | 1.3:+32094143 | None:intergenic |
| GAAAATAGAGGGGTTGGACG+AGG | 0.389124 | 1.3:+32103818 | None:intergenic |
| AGTTGGCATACAGCAAAATA+TGG | 0.395674 | 1.3:+32100777 | None:intergenic |
| ACAGTAATATCTAACTTGTT+AGG | 0.396771 | 1.3:-32100545 | MS.gene84011:CDS |
| GGATGGCGAGGGCGGGAAGA+AGG | 0.414231 | 1.3:+32103794 | None:intergenic |
| AATATCATGTATCCAAAATT+GGG | 0.421936 | 1.3:-32103105 | MS.gene84011:CDS |
| AATATTACCCTAGAAAAGTA+TGG | 0.424514 | 1.3:+32101239 | None:intergenic |
| GTCTGAAGGGAGTGGGGCGG+TGG | 0.425306 | 1.3:+32103741 | None:intergenic |
| CGGAGTCTTTCAATTATCTC+TGG | 0.427541 | 1.3:-32094607 | MS.gene84011:CDS |
| ACCACTACCATCCAACTGAT+TGG | 0.435166 | 1.3:+32103706 | None:intergenic |
| GATGGCGAGGGCGGGAAGAA+GGG | 0.436446 | 1.3:+32103795 | None:intergenic |
| AATGCTATTGAATACCAATA+AGG | 0.454180 | 1.3:+32094636 | None:intergenic |
| TCAGAAAACATTACCAGTAA+TGG | 0.457392 | 1.3:-32094365 | MS.gene84011:intron |
| ATCACAAAATTTGTAGCTAG+TGG | 0.459990 | 1.3:-32098861 | MS.gene84011:CDS |
| CAGTTGGATGGTAGTGGTAG+TGG | 0.470738 | 1.3:-32103701 | MS.gene84011:CDS |
| CCCCTAGCAAAGCTCAAAAT+GGG | 0.471486 | 1.3:+32103644 | None:intergenic |
| TAAGCCACCTTGACATTGCC+GGG | 0.474863 | 1.3:+32094144 | None:intergenic |
| ACTAGCCCAAAGAGTCCAAC+AGG | 0.477856 | 1.3:+32102902 | None:intergenic |
| GGATTAACATGTCCTAGTCT+TGG | 0.479373 | 1.3:-32103142 | MS.gene84011:CDS |
| CTGTAATAAATTCTTGGGGT+TGG | 0.480588 | 1.3:+32101204 | None:intergenic |
| GCTGTAGAAGCATGGCCTGT+TGG | 0.481048 | 1.3:-32102917 | MS.gene84011:CDS |
| GGAGTGAGGATGGCGAGGGC+GGG | 0.485143 | 1.3:+32103787 | None:intergenic |
| GGGAAGAAGGGGAAAATAGA+GGG | 0.485919 | 1.3:+32103807 | None:intergenic |
| AAATTTGTAGCTAGTGGAGT+TGG | 0.486943 | 1.3:-32098855 | MS.gene84011:CDS |
| AGGGGTTGGACGAGGGAATG+AGG | 0.487237 | 1.3:+32103826 | None:intergenic |
| AGCAAATTCCTACCAGGCTA+AGG | 0.489921 | 1.3:+32095895 | None:intergenic |
| TTTCTTGTAGCTATTGGACT+GGG | 0.493824 | 1.3:-32095579 | MS.gene84011:CDS |
| GAAGGGGAAAATAGAGGGGT+TGG | 0.496201 | 1.3:+32103812 | None:intergenic |
| ATATCATCCTGCAGGTACCT+TGG | 0.501746 | 1.3:-32095653 | MS.gene84011:intron |
| TGGGGCGGTGGCGTAGAGTG+AGG | 0.502175 | 1.3:+32103753 | None:intergenic |
| CGGAGTGAGGATGGCGAGGG+CGG | 0.505348 | 1.3:+32103786 | None:intergenic |
| CACTCGACGGAGGTCATGGC+GGG | 0.511861 | 1.3:-32103887 | None:intergenic |
| AAAATAGAGGGGTTGGACGA+GGG | 0.518366 | 1.3:+32103819 | None:intergenic |
| ACACCACTTGATAATGTAGT+TGG | 0.522256 | 1.3:+32100760 | None:intergenic |
| TGCTGGAGCAAATACTGCAC+TGG | 0.529303 | 1.3:-32100579 | MS.gene84011:CDS |
| AGGGGAAATGTCTTACCTCT+AGG | 0.539481 | 1.3:-32103626 | MS.gene84011:intron |
| GACTTGCTCACTTGTATCCA+AGG | 0.541072 | 1.3:+32095636 | None:intergenic |
| GTGGTGCATTTGGAGAATCT+GGG | 0.542143 | 1.3:-32094321 | MS.gene84011:CDS |
| GGGGCGGTGGCGTAGAGTGA+GGG | 0.542160 | 1.3:+32103754 | None:intergenic |
| ACTCATACTAGTTGCAAGCC+AGG | 0.542506 | 1.3:-32094542 | MS.gene84011:intron |
| TATTCAATAGCATTGCTGTC+CGG | 0.543451 | 1.3:-32094627 | MS.gene84011:CDS |
| AAGAGTCAGAAGGATTGAGA+TGG | 0.543459 | 1.3:-32103673 | MS.gene84011:CDS |
| GTGTTGCGAAGCGAAGAAAT+TGG | 0.543607 | 1.3:-32102944 | MS.gene84011:CDS |
| TCCAATCAGTTGGATGGTAG+TGG | 0.545642 | 1.3:-32103707 | MS.gene84011:CDS |
| GGATTGAGCACATGGTCTGA+AGG | 0.546750 | 1.3:+32103727 | None:intergenic |
| GCACATGGTCTGAAGGGAGT+GGG | 0.546886 | 1.3:+32103734 | None:intergenic |
| GGAAGAAGGGGAAAATAGAG+GGG | 0.548611 | 1.3:+32103808 | None:intergenic |
| ATTTAATGGCGGAGTGAGGA+TGG | 0.549666 | 1.3:+32103777 | None:intergenic |
| AGCACATGGTCTGAAGGGAG+TGG | 0.558159 | 1.3:+32103733 | None:intergenic |
| CACATGGTCTGAAGGGAGTG+GGG | 0.559219 | 1.3:+32103735 | None:intergenic |
| ATTAGATGTGTTGCAATACA+AGG | 0.561844 | 1.3:+32094286 | None:intergenic |
| GAACACCTTGTAGATTATTG+TGG | 0.563250 | 1.3:-32094205 | MS.gene84011:intron |
| ATTACCTTTCCCAAAATAAG+GGG | 0.563723 | 1.3:+32098777 | None:intergenic |
| AACTGATTGGATTGAGCACA+TGG | 0.564053 | 1.3:+32103719 | None:intergenic |
| GCGGTTATAGAGCCACTTTG+TGG | 0.565801 | 1.3:-32094340 | MS.gene84011:CDS |
| TATTGCAACACATCTAATCC+AGG | 0.567214 | 1.3:-32094281 | MS.gene84011:intron |
| AGGGATTTAATGGCGGAGTG+AGG | 0.569386 | 1.3:+32103773 | None:intergenic |
| AGACAATCCCGGCAATGTCA+AGG | 0.577252 | 1.3:-32094151 | MS.gene84011:CDS |
| AGTCTTTCAATTATCTCTGG+TGG | 0.578014 | 1.3:-32094604 | MS.gene84011:CDS |
| TGATCCCTGAGAAAAGCTTA+CGG | 0.582266 | 1.3:+32095928 | None:intergenic |
| GATTGAGCACATGGTCTGAA+GGG | 0.582552 | 1.3:+32103728 | None:intergenic |
| ATGGCGGAGTGAGGATGGCG+AGG | 0.585893 | 1.3:+32103782 | None:intergenic |
| ATGTGCTCAATCCAATCAGT+TGG | 0.587326 | 1.3:-32103717 | MS.gene84011:CDS |
| TCAACAGCGCAACCAAGACT+AGG | 0.588891 | 1.3:+32103130 | None:intergenic |
| ATGCGTCGCAAAGACAATCC+CGG | 0.590549 | 1.3:-32094162 | MS.gene84011:CDS |
| ATGGTCTGAAGGGAGTGGGG+CGG | 0.591354 | 1.3:+32103738 | None:intergenic |
| AACATTACCAGTAATGGTAG+CGG | 0.596517 | 1.3:-32094359 | MS.gene84011:CDS |
| TGGCGTGAGGATGAGTAAAT+GGG | 0.597198 | 1.3:+32103856 | None:intergenic |
| TGGCGGAGTGAGGATGGCGA+GGG | 0.599047 | 1.3:+32103783 | None:intergenic |
| GAGGATGAGTAAATGGGCGG+TGG | 0.603068 | 1.3:+32103862 | None:intergenic |
| CAGAGATAATTGAAAGACTC+CGG | 0.603417 | 1.3:+32094608 | None:intergenic |
| AAGTGGTGTTGCACTTACCC+AGG | 0.603604 | 1.3:-32100746 | MS.gene84011:intron |
| TGCAACTAGTATGAGTGCGT+TGG | 0.605826 | 1.3:+32094549 | None:intergenic |
| AGAGTCAGAAGGATTGAGAT+GGG | 0.613721 | 1.3:-32103672 | MS.gene84011:CDS |
| AAACCTGTAATAAATTCTTG+GGG | 0.616241 | 1.3:+32101200 | None:intergenic |
| TCTCCAAATGCACCACAAAG+TGG | 0.621477 | 1.3:+32094328 | None:intergenic |
| TTACCTTTCCCAAAATAAGG+GGG | 0.625879 | 1.3:+32098778 | None:intergenic |
| ATTTGTAGCTCTGATTTCTG+CGG | 0.627818 | 1.3:-32103173 | MS.gene84011:intron |
| GCTCAATCCAATCAGTTGGA+TGG | 0.629293 | 1.3:-32103713 | MS.gene84011:CDS |
| GGATACAAGTGAGCAAGTCA+AGG | 0.631449 | 1.3:-32095632 | MS.gene84011:CDS |
| TTGGTGCAGCTGTAGAAGCA+TGG | 0.632248 | 1.3:-32102925 | MS.gene84011:CDS |
| AGTGGAAGCAAAGAGTCAGA+AGG | 0.633086 | 1.3:-32103683 | MS.gene84011:CDS |
| ATGCCAACTACATTATCAAG+TGG | 0.643732 | 1.3:-32100763 | MS.gene84011:CDS |
| ATGAGGATGAATGTGGCGTG+AGG | 0.678200 | 1.3:+32103843 | None:intergenic |
| CAATCCCGGCAATGTCAAGG+TGG | 0.687891 | 1.3:-32094148 | MS.gene84011:CDS |
| TAGAGTGAGGGATTTAATGG+CGG | 0.692309 | 1.3:+32103766 | None:intergenic |
| CGTGAGGATGAGTAAATGGG+CGG | 0.692761 | 1.3:+32103859 | None:intergenic |
| CGAGGGAATGAGGATGAATG+TGG | 0.697030 | 1.3:+32103836 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 32094143 | 32103894 | 32094143 | ID=MS.gene84011 |
| chr1.3 | mRNA | 32094143 | 32103894 | 32094143 | ID=MS.gene84011.t1;Parent=MS.gene84011 |
| chr1.3 | exon | 32103627 | 32103894 | 32103627 | ID=MS.gene84011.t1.exon1;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32103627 | 32103894 | 32103627 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32103080 | 32103187 | 32103080 | ID=MS.gene84011.t1.exon2;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32103080 | 32103187 | 32103080 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32102904 | 32102971 | 32102904 | ID=MS.gene84011.t1.exon3;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32102904 | 32102971 | 32102904 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32101204 | 32101282 | 32101204 | ID=MS.gene84011.t1.exon4;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32101204 | 32101282 | 32101204 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32100747 | 32100805 | 32100747 | ID=MS.gene84011.t1.exon5;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32100747 | 32100805 | 32100747 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32100535 | 32100603 | 32100535 | ID=MS.gene84011.t1.exon6;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32100535 | 32100603 | 32100535 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32098782 | 32098895 | 32098782 | ID=MS.gene84011.t1.exon7;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32098782 | 32098895 | 32098782 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32097786 | 32097807 | 32097786 | ID=MS.gene84011.t1.exon8;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32097786 | 32097807 | 32097786 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32095908 | 32095975 | 32095908 | ID=MS.gene84011.t1.exon9;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32095908 | 32095975 | 32095908 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32095576 | 32095661 | 32095576 | ID=MS.gene84011.t1.exon10;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32095576 | 32095661 | 32095576 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32094543 | 32094672 | 32094543 | ID=MS.gene84011.t1.exon11;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32094543 | 32094672 | 32094543 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32094282 | 32094383 | 32094282 | ID=MS.gene84011.t1.exon12;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32094282 | 32094383 | 32094282 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| chr1.3 | exon | 32094143 | 32094214 | 32094143 | ID=MS.gene84011.t1.exon13;Parent=MS.gene84011.t1 |
| chr1.3 | CDS | 32094143 | 32094214 | 32094143 | ID=cds.MS.gene84011.t1;Parent=MS.gene84011.t1 |
| Gene Sequence |
| Protein sequence |
