AlfalfaGEDB | MS.gene062978

M. sativa cultivar XinJiangDaYe / MS.gene062978

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062978.t1	AES89342.1	98.9	92	1	0	1	92	1	92	1.80E-45	191.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062978.t1	P33083	75.6	90	22	0	1	90	1	90	8.0e-34	144.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062978.t1	G7JM99	98.9	92	1	0	1	92	1	92	1.3e-45	191.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049151	MS.gene062978	0.800236	1.58E-48	-1.69E-46
MS.gene049346	MS.gene062978	0.853191	2.81E-61	-1.69E-46
MS.gene049758	MS.gene062978	0.845393	4.18E-59	-1.69E-46
MS.gene049910	MS.gene062978	0.805035	1.62E-49	-1.69E-46
MS.gene049915	MS.gene062978	0.852044	5.97E-61	-1.69E-46
MS.gene050128	MS.gene062978	0.817821	2.70E-52	-1.69E-46
MS.gene050301	MS.gene062978	0.814215	1.73E-51	-1.69E-46
MS.gene052178	MS.gene062978	0.841261	5.29E-58	-1.69E-46
MS.gene052340	MS.gene062978	0.829397	5.27E-55	-1.69E-46
MS.gene053073	MS.gene062978	0.861871	7.56E-64	-1.69E-46
MS.gene053557	MS.gene062978	0.832772	7.81E-56	-1.69E-46
MS.gene053836	MS.gene062978	0.832578	8.72E-56	-1.69E-46
MS.gene054184	MS.gene062978	0.813479	2.51E-51	-1.69E-46
MS.gene054185	MS.gene062978	0.819373	1.20E-52	-1.69E-46
MS.gene054542	MS.gene062978	0.822729	2.03E-53	-1.69E-46
MS.gene054983	MS.gene062978	0.808882	2.49E-50	-1.69E-46
MS.gene055116	MS.gene062978	0.804554	2.04E-49	-1.69E-46
MS.gene055133	MS.gene062978	0.83286	7.43E-56	-1.69E-46
MS.gene056612	MS.gene062978	0.811516	6.73E-51	-1.69E-46
MS.gene05702	MS.gene062978	0.842007	3.36E-58	-1.69E-46
MS.gene057754	MS.gene062978	0.87224	3.70E-67	-1.69E-46
MS.gene057779	MS.gene062978	0.801309	9.57E-49	-1.69E-46
MS.gene057782	MS.gene062978	0.825815	3.82E-54	-1.69E-46
MS.gene057794	MS.gene062978	0.834356	3.14E-56	-1.69E-46
MS.gene057796	MS.gene062978	0.82507	5.73E-54	-1.69E-46
MS.gene058002	MS.gene062978	0.801514	8.69E-49	-1.69E-46
MS.gene058236	MS.gene062978	0.800261	1.57E-48	-1.69E-46
MS.gene058749	MS.gene062978	0.810159	1.32E-50	-1.69E-46
MS.gene058845	MS.gene062978	0.817539	3.13E-52	-1.69E-46
MS.gene059285	MS.gene062978	0.805378	1.37E-49	-1.69E-46
MS.gene059597	MS.gene062978	0.804818	1.80E-49	-1.69E-46
MS.gene059692	MS.gene062978	0.804353	2.25E-49	-1.69E-46
MS.gene059894	MS.gene062978	0.852156	5.55E-61	-1.69E-46
MS.gene06037	MS.gene062978	0.826876	2.13E-54	-1.69E-46
MS.gene060476	MS.gene062978	0.848437	6.13E-60	-1.69E-46
MS.gene060495	MS.gene062978	0.807749	4.34E-50	-1.69E-46
MS.gene061049	MS.gene062978	0.874374	7.10E-68	-1.69E-46
MS.gene061112	MS.gene062978	0.812748	3.63E-51	-1.69E-46
MS.gene061113	MS.gene062978	0.840691	7.46E-58	-1.69E-46
MS.gene061265	MS.gene062978	0.818167	2.26E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene062978	MS.gene75675	PPI
MS.gene062978	MS.gene045361	PPI
MS.gene062978	MS.gene79887	PPI
MS.gene062978	MS.gene75679	PPI
MS.gene062978	MS.gene68761	PPI
MS.gene062978	MS.gene40325	PPI
MS.gene062978	MS.gene75677	PPI
MS.gene062978	MS.gene50763	PPI
MS.gene062978	MS.gene50677	PPI
MS.gene062978	MS.gene79890	PPI
MS.gene062978	MS.gene50684	PPI
MS.gene062978	MS.gene057797	PPI
MS.gene062978	MS.gene003614	PPI
MS.gene062978	MS.gene014668	PPI
MS.gene062978	MS.gene75316	PPI
MS.gene062978	MS.gene79886	PPI
MS.gene062978	MS.gene014671	PPI
MS.gene062978	MS.gene50765	PPI
MS.gene062978	MS.gene003596	PPI
MS.gene062978	MS.gene014667	PPI
MS.gene062978	MS.gene003615	PPI
MS.gene062978	MS.gene062988	PPI
MS.gene062978	MS.gene23371	PPI
MS.gene062978	MS.gene062974	PPI
MS.gene062978	MS.gene003583	PPI
MS.gene062978	MS.gene062951	PPI
MS.gene062978	MS.gene057801	PPI
MS.gene062978	MS.gene003608	PPI
MS.gene062978	MS.gene77527	PPI
MS.gene062978	MS.gene003591	PPI
MS.gene062978	MS.gene79891	PPI
MS.gene062978	MS.gene057795	PPI
MS.gene062978	MS.gene045367	PPI
MS.gene062978	MS.gene045364	PPI
MS.gene062978	MS.gene045363	PPI
MS.gene062978	MS.gene062973	PPI
MS.gene062978	MS.gene50652	PPI
MS.gene062978	MS.gene002380	PPI
MS.gene062978	MS.gene77529	PPI
MS.gene062978	MS.gene68165	PPI
MS.gene062978	MS.gene77526	PPI
MS.gene062978	MS.gene77523	PPI
MS.gene062978	MS.gene045366	PPI
MS.gene062978	MS.gene045365	PPI
MS.gene062978	MS.gene045362	PPI
MS.gene062978	MS.gene23372	PPI
MS.gene062978	MS.gene057790	PPI
MS.gene062978	MS.gene75315	PPI
MS.gene062978	MS.gene062952	PPI
MS.gene062978	MS.gene057818	PPI
MS.gene062978	MS.gene68164	PPI
MS.gene062978	MS.gene062979	PPI
MS.gene062978	MS.gene003624	PPI
MS.gene062978	MS.gene68759	PPI
MS.gene062978	MS.gene003586	PPI
MS.gene062978	MS.gene003627	PPI
MS.gene062978	MS.gene031200	PPI
MS.gene062978	MS.gene79888	PPI
MS.gene062978	MS.gene75676	PPI
MS.gene062978	MS.gene40326	PPI
MS.gene062978	MS.gene003590	PPI
MS.gene062978	MS.gene50687	PPI
MS.gene062978	MS.gene50665	PPI
MS.gene062978	MS.gene014223	PPI
MS.gene062978	MS.gene003625	PPI
MS.gene062978	MS.gene50766	PPI
MS.gene062978	MS.gene79885	PPI
MS.gene062978	MS.gene003587	PPI
MS.gene062978	MS.gene014669	PPI
MS.gene062978	MS.gene057808	PPI
MS.gene062978	MS.gene047517	PPI
MS.gene062978	MS.gene01358	PPI
MS.gene062978	MS.gene062963	PPI
MS.gene062978	MS.gene063112	PPI
MS.gene062978	MS.gene003602	PPI
MS.gene062978	MS.gene68163	PPI
MS.gene062978	MS.gene062984	PPI
MS.gene062978	MS.gene79889	PPI
MS.gene062978	MS.gene045368	PPI
MS.gene062978	MS.gene23370	PPI
MS.gene062978	MS.gene40327	PPI
MS.gene062978	MS.gene045360	PPI
MS.gene062978	MS.gene014222	PPI
MS.gene062978	MS.gene50659	PPI
MS.gene062978	MS.gene75678	PPI
MS.gene062978	MS.gene75314	PPI
MS.gene062978	MS.gene01764	PPI
MS.gene062978	MS.gene031199	PPI
MS.gene062978	MS.gene75673	PPI
MS.gene062978	MS.gene057778	PPI
MS.gene062978	MS.gene68760	PPI
MS.gene062978	MS.gene031198	PPI
MS.gene062978	MS.gene50676	PPI
MS.gene062978	MS.gene50764	PPI
MS.gene062978	MS.gene77528	PPI
MS.gene062978	MS.gene003577	PPI
MS.gene062978	MS.gene003594	PPI
MS.gene062978	MS.gene75672	PPI
MS.gene062978	MS.gene75674	PPI
MS.gene062978	MS.gene50654	PPI
MS.gene062978	MS.gene50675	PPI
MS.gene062978	MS.gene031201	PPI
MS.gene062978	MS.gene014670	PPI
MS.gene062978	MS.gene062943	PPI
MS.gene062978	MS.gene77524	PPI
MS.gene062978	MS.gene68162	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062978.t1	MTR_4g072730	98.913	92	1	0	1	92	1	92	8.87e-66	192
MS.gene062978.t1	MTR_4g072620	91.209	91	8	0	1	91	1	91	8.20e-60	177
MS.gene062978.t1	MTR_4g072480	87.912	91	11	0	1	91	1	91	5.15e-58	173
MS.gene062978.t1	MTR_4g072680	87.912	91	11	0	1	91	1	91	3.67e-57	171
MS.gene062978.t1	MTR_4g072660	90.110	91	4	1	1	91	1	86	1.69e-56	169
MS.gene062978.t1	MTR_4g072460	85.714	91	13	0	1	91	1	91	2.28e-55	166
MS.gene062978.t1	MTR_4g072500	80.220	91	18	0	1	91	1	91	2.13e-51	156
MS.gene062978.t1	MTR_4g072640	79.348	92	19	0	1	92	1	92	3.06e-51	155
MS.gene062978.t1	MTR_4g072530	78.889	90	19	0	1	90	1	90	1.34e-49	152
MS.gene062978.t1	MTR_4g072570	78.022	91	20	0	1	91	1	91	7.25e-49	150
MS.gene062978.t1	MTR_3g084150	73.626	91	24	0	1	91	1	91	9.89e-47	144
MS.gene062978.t1	MTR_4g072270	72.826	92	24	1	1	91	1	92	3.85e-46	143
MS.gene062978.t1	MTR_4g072310	71.739	92	25	1	1	91	1	92	8.20e-46	142
MS.gene062978.t1	MTR_3g084180	72.527	91	25	0	1	91	1	91	1.28e-45	142
MS.gene062978.t1	MTR_4g072880	71.739	92	25	1	1	91	1	92	1.52e-45	141
MS.gene062978.t1	MTR_8g461410	71.429	91	26	0	1	91	1	91	2.84e-45	140
MS.gene062978.t1	MTR_4g072240	70.330	91	26	1	1	90	1	91	2.29e-44	138
MS.gene062978.t1	MTR_4g072860	72.826	92	24	1	1	91	1	92	3.31e-44	138
MS.gene062978.t1	MTR_4g072230	71.739	92	23	2	1	91	1	90	6.72e-44	137
MS.gene062978.t1	MTR_4g072250	73.913	92	22	2	1	91	1	91	1.32e-43	136
MS.gene062978.t1	MTR_3g084240	69.231	91	28	0	1	91	1	91	4.52e-43	135
MS.gene062978.t1	MTR_4g072870	68.132	91	28	1	1	90	1	91	8.10e-43	134
MS.gene062978.t1	MTR_3g084170	69.231	91	28	0	1	91	1	91	1.09e-42	134
MS.gene062978.t1	MTR_3g117630	76.190	84	20	0	7	90	7	90	1.54e-42	134
MS.gene062978.t1	MTR_4g072300	65.934	91	30	1	1	90	1	91	2.48e-42	133
MS.gene062978.t1	MTR_3g110042	73.563	87	23	0	1	87	1	87	3.12e-42	133
MS.gene062978.t1	MTR_4g072220	65.934	91	30	1	1	90	1	91	4.98e-42	132
MS.gene062978.t1	MTR_3g110038	67.778	90	29	0	1	90	1	90	3.67e-41	130
MS.gene062978.t1	MTR_4g072330	68.889	90	26	1	1	90	1	88	3.82e-41	130
MS.gene062978.t1	MTR_3g084220	68.132	91	29	0	1	91	1	91	7.83e-41	129
MS.gene062978.t1	MTR_4g050700	67.391	92	29	1	1	91	1	92	2.17e-40	128
MS.gene062978.t1	MTR_2g012410	67.391	92	29	1	1	91	1	92	2.17e-40	128
MS.gene062978.t1	MTR_4g072370	67.778	90	27	1	1	90	1	88	2.47e-40	128
MS.gene062978.t1	MTR_5g008360	77.215	79	18	0	13	91	4	82	2.59e-40	128
MS.gene062978.t1	MTR_5g008370	81.081	74	14	0	18	91	18	91	3.12e-40	129
MS.gene062978.t1	MTR_4g072890	63.736	91	32	1	1	90	1	91	9.69e-40	127
MS.gene062978.t1	MTR_4g072550	81.944	72	13	0	20	91	31	102	1.12e-39	127
MS.gene062978.t1	MTR_4g072830	68.539	89	26	1	1	89	1	87	1.58e-39	126
MS.gene062978.t1	MTR_3g110032	66.304	92	30	1	1	91	1	92	1.58e-39	126
MS.gene062978.t1	MTR_3g084250	64.835	91	32	0	1	91	1	91	1.69e-39	126
MS.gene062978.t1	MTR_4g072260	62.637	91	33	1	1	90	1	91	2.53e-39	125
MS.gene062978.t1	MTR_4g072630	66.667	90	26	1	1	90	1	86	3.89e-39	125
MS.gene062978.t1	MTR_4g072490	66.667	90	25	1	1	90	1	85	4.81e-39	125
MS.gene062978.t1	MTR_4g072740	67.778	90	24	1	1	90	1	85	1.29e-38	124
MS.gene062978.t1	MTR_4g072850	68.478	92	27	1	1	90	1	92	1.52e-38	124
MS.gene062978.t1	MTR_3g084210	65.934	91	31	0	1	91	1	91	1.65e-38	124
MS.gene062978.t1	MTR_4g072580	65.556	90	26	1	1	90	1	85	1.90e-38	123
MS.gene062978.t1	MTR_4g072600	66.667	90	25	1	1	90	1	85	1.98e-38	123
MS.gene062978.t1	MTR_3g084260	65.217	92	31	1	1	91	1	92	3.22e-38	123
MS.gene062978.t1	MTR_4g072540	67.778	90	25	1	1	90	1	86	8.66e-38	122
MS.gene062978.t1	MTR_3g084190	66.667	90	30	0	1	90	1	90	1.79e-37	121
MS.gene062978.t1	MTR_8g461420	65.556	90	31	0	1	90	1	90	2.92e-37	120
MS.gene062978.t1	MTR_4g072470	65.556	90	26	1	1	90	1	85	3.28e-37	120
MS.gene062978.t1	MTR_3g084230	65.556	90	31	0	1	90	1	90	1.10e-36	119
MS.gene062978.t1	MTR_4g072465	61.111	90	31	1	1	90	1	86	2.46e-36	118
MS.gene062978.t1	MTR_3g084160	65.556	90	31	0	1	90	1	90	2.71e-36	118
MS.gene062978.t1	MTR_4g072720	65.556	90	27	1	1	90	1	86	9.78e-36	116
MS.gene062978.t1	MTR_4g072590	64.444	90	27	1	1	90	1	85	1.07e-35	116
MS.gene062978.t1	MTR_4g072670	65.556	90	27	1	1	90	1	86	1.12e-35	116
MS.gene062978.t1	MTR_4g072610	65.556	90	25	1	1	90	1	84	1.58e-35	116
MS.gene062978.t1	MTR_4g072940	77.143	70	16	0	21	90	53	122	3.54e-35	116
MS.gene062978.t1	MTR_4g072510	65.556	90	27	1	1	90	1	86	6.17e-35	114
MS.gene062978.t1	MTR_4g072820	63.736	91	26	2	1	90	1	85	1.44e-34	114
MS.gene062978.t1	MTR_3g110045	64.835	91	30	1	2	90	59	149	2.46e-34	115
MS.gene062978.t1	MTR_4g072380	61.111	90	31	1	1	90	1	86	5.50e-34	112
MS.gene062978.t1	MTR_4g072650	61.111	90	29	1	1	90	1	84	4.90e-33	110
MS.gene062978.t1	MTR_4g072690	63.333	90	28	1	1	90	1	85	5.43e-32	107
MS.gene062978.t1	MTR_4g072290	57.609	92	24	2	1	91	1	78	3.26e-31	105
MS.gene062978.t1	MTR_5g008350	63.291	79	24	1	1	79	1	74	4.48e-31	104
MS.gene062978.t1	MTR_4g072450	60.000	90	31	1	1	90	1	85	4.16e-30	102
MS.gene062978.t1	MTR_4g072770	56.667	90	29	1	1	90	1	80	9.24e-30	101
MS.gene062978.t1	MTR_4g072910	65.672	67	23	0	24	90	34	100	3.91e-29	100
MS.gene062978.t1	MTR_4g072980	54.348	92	36	2	1	91	8	94	6.02e-29	99.8
MS.gene062978.t1	MTR_3g117640	69.118	68	20	1	25	91	34	101	1.62e-28	99.0
MS.gene062978.t1	MTR_3g084200	61.111	72	28	0	1	72	1	72	1.74e-28	99.0
MS.gene062978.t1	MTR_4g072750	63.514	74	25	1	1	72	1	74	2.53e-28	98.2
MS.gene062978.t1	MTR_4g072560	56.627	83	35	1	8	89	15	97	3.88e-28	97.8
MS.gene062978.t1	MTR_3g110035	65.152	66	23	0	26	91	72	137	8.74e-27	95.9
MS.gene062978.t1	MTR_4g072280	57.333	75	31	1	1	74	1	75	3.29e-26	92.4
MS.gene062978.t1	MTR_6g077850	55.224	67	30	0	24	90	33	99	1.47e-25	91.7
MS.gene062978.t1	MTR_3g113310	57.353	68	28	1	23	90	40	106	6.16e-25	90.1
MS.gene062978.t1	MTR_3g117610	59.701	67	26	1	23	89	43	108	5.75e-24	87.8
MS.gene062978.t1	MTR_4g072190	52.941	85	38	2	5	89	17	99	6.59e-24	87.4
MS.gene062978.t1	MTR_8g076040	49.367	79	39	1	11	89	27	104	5.06e-21	80.1
MS.gene062978.t1	MTR_5g021820	53.030	66	30	1	24	89	39	103	1.08e-20	79.3
MS.gene062978.t1	MTR_4g072930	50.617	81	34	2	16	90	30	110	1.50e-20	79.0
MS.gene062978.t1	MTR_8g461400	47.253	91	22	1	1	91	1	65	1.13e-19	75.5
MS.gene062978.t1	MTR_2g043960	46.667	75	39	1	15	89	66	139	3.13e-18	74.7
MS.gene062978.t1	MTR_4g124750	50.000	66	32	1	24	89	68	132	7.55e-18	73.6
MS.gene062978.t1	MTR_8g461210	41.860	86	49	1	4	89	14	98	1.47e-16	68.9
MS.gene062978.t1	MTR_1g024085	46.988	83	40	2	4	83	13	94	3.60e-16	68.9
MS.gene062978.t1	MTR_4g005310	46.970	66	34	1	21	85	58	123	1.50e-15	67.4
MS.gene062978.t1	MTR_4g072840	43.956	91	19	3	1	90	1	60	1.98e-15	64.7
MS.gene062978.t1	MTR_1g009150	52.459	61	28	1	25	85	71	130	6.45e-15	66.2
MS.gene062978.t1	MTR_4g072160	46.753	77	38	2	17	92	29	103	1.05e-14	65.1
MS.gene062978.t1	MTR_7g118010	48.529	68	32	2	25	90	23	89	2.39e-14	63.2
MS.gene062978.t1	MTR_1g094750	46.667	75	36	2	14	85	36	109	2.69e-14	63.2
MS.gene062978.t1	MTR_3g109160	49.254	67	33	1	25	91	69	134	6.13e-14	63.5
MS.gene062978.t1	MTR_0388s0020	43.836	73	37	2	20	89	70	141	9.00e-14	62.8
MS.gene062978.t1	MTR_4g025830	46.970	66	31	2	25	87	79	143	1.61e-13	62.4
MS.gene062978.t1	MTR_1g061570	45.588	68	36	1	24	91	18	84	1.84e-13	61.2
MS.gene062978.t1	MTR_4g005320	47.541	61	31	1	25	85	70	129	1.88e-13	62.4
MS.gene062978.t1	MTR_3g092220	38.824	85	46	3	1	83	12	92	1.92e-13	61.2
MS.gene062978.t1	MTR_8g026730	45.588	68	34	2	25	90	27	93	2.88e-13	60.5
MS.gene062978.t1	MTR_1g063950	39.130	69	41	1	24	92	47	114	1.93e-12	58.5
MS.gene062978.t1	MTR_2g066830	37.079	89	49	2	2	90	41	122	2.34e-12	58.9
MS.gene062978.t1	MTR_4g021810	44.156	77	38	3	10	85	14	86	2.84e-12	57.8
MS.gene062978.t1	MTR_3g097120	40.000	75	36	2	19	85	3	76	3.39e-12	57.8
MS.gene062978.t1	MTR_1g059770	43.284	67	34	2	28	91	52	117	5.95e-12	57.8
MS.gene062978.t1	MTR_8g101530	37.333	75	46	1	13	87	28	101	6.36e-12	57.8
MS.gene062978.t1	MTR_3g098970	36.842	76	47	1	15	90	43	117	9.44e-12	57.4
MS.gene062978.t1	MTR_1g063310	37.079	89	51	3	5	90	6	92	1.29e-11	56.2
MS.gene062978.t1	MTR_7g104940	40.323	62	36	1	28	89	53	113	3.20e-11	55.8
MS.gene062978.t1	MTR_7g101740	42.188	64	36	1	24	87	39	101	5.94e-11	54.7
MS.gene062978.t1	MTR_7g405740	40.230	87	38	3	12	85	41	126	7.97e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062978.t1	AT4G34770	58.889	90	35	1	4	91	14	103	1.95e-31	106
MS.gene062978.t1	AT4G38840	70.588	68	19	1	24	90	32	99	2.04e-31	106
MS.gene062978.t1	AT4G38825	56.627	83	35	1	9	90	7	89	3.55e-29	100
MS.gene062978.t1	AT2G21210	52.632	95	40	2	1	90	1	95	3.72e-29	100
MS.gene062978.t1	AT5G18020	53.409	88	39	2	1	87	1	87	5.94e-29	99.8
MS.gene062978.t1	AT5G18080	53.846	91	40	2	1	90	1	90	9.88e-29	99.4
MS.gene062978.t1	AT2G21210	52.632	95	40	2	1	90	68	162	2.03e-28	100
MS.gene062978.t1	AT3G03840	56.044	91	35	2	3	91	8	95	2.10e-28	98.6
MS.gene062978.t1	AT5G18060	67.692	65	20	1	27	90	26	90	2.25e-28	98.2
MS.gene062978.t1	AT2G21200	64.789	71	24	1	20	89	16	86	2.70e-28	98.2
MS.gene062978.t1	AT4G34800	55.294	85	31	2	1	82	1	81	3.17e-28	98.2
MS.gene062978.t1	AT3G03820	58.621	87	30	2	8	91	13	96	3.99e-28	97.8
MS.gene062978.t1	AT5G18030	59.459	74	29	1	18	90	15	88	5.27e-28	97.4
MS.gene062978.t1	AT5G18050	66.154	65	21	1	27	90	26	90	9.86e-28	96.7
MS.gene062978.t1	AT3G03850	59.783	92	28	3	3	91	8	93	1.08e-27	96.7
MS.gene062978.t1	AT4G38850	62.500	72	24	1	19	87	15	86	7.11e-27	94.4
MS.gene062978.t1	AT5G18010	50.549	91	43	2	1	90	1	90	9.71e-27	94.4
MS.gene062978.t1	AT4G34810	66.129	62	17	1	25	82	48	109	6.96e-26	92.8
MS.gene062978.t1	AT3G03830	54.545	88	31	2	3	87	8	89	8.09e-25	89.4
MS.gene062978.t1	AT4G13790	57.143	70	28	1	20	87	20	89	5.49e-24	87.4
MS.gene062978.t1	AT4G38860	58.824	68	28	0	23	90	38	105	9.63e-24	87.0
MS.gene062978.t1	AT4G34780	61.429	70	24	1	23	89	26	95	1.42e-23	86.7
MS.gene062978.t1	AT1G75580	61.194	67	25	1	23	89	42	107	7.14e-23	85.1
MS.gene062978.t1	AT4G34790	60.000	65	24	1	25	87	39	103	7.79e-23	84.7
MS.gene062978.t1	AT2G21220	58.209	67	27	1	23	89	38	103	8.51e-23	84.7
MS.gene062978.t1	AT4G34760	57.353	68	28	1	23	90	41	107	1.08e-22	84.3
MS.gene062978.t1	AT1G19830	50.685	73	35	1	20	92	43	114	1.55e-19	76.6
MS.gene062978.t1	AT2G16580	52.941	68	31	1	23	90	42	108	2.33e-19	75.9
MS.gene062978.t1	AT3G43120	40.449	89	52	1	3	91	57	144	4.70e-19	76.6
MS.gene062978.t1	AT4G36110	54.688	64	28	1	24	87	39	101	1.20e-18	73.9
MS.gene062978.t1	AT2G18010	53.125	64	29	1	24	87	47	109	8.15e-18	72.4
MS.gene062978.t1	AT5G20810	50.000	66	32	1	24	89	78	142	2.13e-17	72.4
MS.gene062978.t1	AT5G20810	46.575	73	38	1	17	89	71	142	3.04e-17	72.8
MS.gene062978.t1	AT5G66260	46.914	81	37	2	15	90	19	98	4.59e-17	70.1
MS.gene062978.t1	AT3G20220	41.573	89	44	3	4	85	20	107	8.30e-17	69.7
MS.gene062978.t1	AT1G75590	44.706	85	41	2	4	83	16	99	9.40e-16	68.2
MS.gene062978.t1	AT5G10990	50.725	69	33	1	15	83	31	98	3.90e-15	66.2
MS.gene062978.t1	AT3G51200	43.038	79	43	2	5	82	19	96	4.01e-15	65.1
MS.gene062978.t1	AT3G12830	41.379	87	49	2	4	90	30	114	7.68e-15	65.1
MS.gene062978.t1	AT1G19840	50.725	69	33	1	15	83	31	98	2.36e-14	64.3
MS.gene062978.t1	AT3G61900	43.590	78	40	2	16	90	21	97	7.39e-14	62.8
MS.gene062978.t1	AT5G53590	45.833	72	33	2	24	90	45	115	9.13e-14	62.8
MS.gene062978.t1	AT4G34750	46.875	64	33	1	24	87	36	98	1.77e-13	62.0
MS.gene062978.t1	AT4G34750	46.875	64	33	1	24	87	36	98	1.77e-13	62.0
MS.gene062978.t1	AT2G37030	40.580	69	40	1	24	92	48	115	2.17e-13	61.2
MS.gene062978.t1	AT2G46690	40.506	79	40	3	19	91	15	92	2.60e-13	60.8
MS.gene062978.t1	AT3G60690	43.056	72	37	2	19	87	82	152	3.97e-13	61.6
MS.gene062978.t1	AT3G09870	48.438	64	30	2	24	85	44	106	5.33e-13	60.1
MS.gene062978.t1	AT2G45210	40.845	71	38	2	20	87	74	143	1.25e-12	60.1
MS.gene062978.t1	AT1G56150	43.421	76	41	2	15	90	29	102	5.92e-12	57.4
MS.gene062978.t1	AT3G03847	42.105	76	41	3	8	82	54	127	8.86e-12	57.4
MS.gene062978.t1	AT4G09530	41.176	68	37	2	27	91	30	97	8.88e-12	56.6
MS.gene062978.t1	AT4G00880	44.928	69	35	2	24	90	27	94	9.22e-12	57.0
MS.gene062978.t1	AT4G31320	47.458	59	30	1	27	85	82	139	1.68e-11	57.8
MS.gene062978.t1	AT1G16510	43.939	66	36	1	25	90	54	118	2.03e-11	56.6
MS.gene062978.t1	AT2G24400	47.541	61	31	1	25	85	64	123	2.64e-11	57.0

Find 22 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATATAACTTCTTGCTTGAA+TGG	0.302470	4.2:-35433992	MS.gene062978:CDS
ATTTCAAGACTTGTTGAATC+AGG	0.333623	4.2:-35434086	MS.gene062978:CDS
AATCAGGCTGAAGAAGAGTT+TGG	0.367604	4.2:-35434070	MS.gene062978:CDS
CGTTTACACACTATTCTAAA+GGG	0.375968	4.2:-35434232	MS.gene062978:CDS
CCGTTTACACACTATTCTAA+AGG	0.405819	4.2:-35434233	MS.gene062978:CDS
ATATAACTTCTTGCTTGAAT+GGG	0.446395	4.2:-35433991	MS.gene062978:CDS
CCTTTAGAATAGTGTGTAAA+CGG	0.450829	4.2:+35434233	None:intergenic
AAAATCTGTAGAAGTGAGAA+AGG	0.468982	4.2:-35434182	MS.gene062978:CDS
TTCAACAAGTCTTGAAATGA+TGG	0.474940	4.2:+35434091	None:intergenic
GGTTGGTTCAAGTATGATAC+AGG	0.489755	4.2:+35434112	None:intergenic
ACAAGTCTTGAAATGATGGT+TGG	0.511297	4.2:+35434095	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.2:-35434052	MS.gene062978:CDS
GGCTATGTTGCAGTGTATGT+TGG	0.553556	4.2:-35434160	MS.gene062978:CDS
GACATCTTCGGTACACGGAA+TGG	0.562504	4.2:+35434021	None:intergenic
GTTTGGATATGATCATCCAA+TGG	0.573812	4.2:-35434053	MS.gene062978:CDS
GGAATGGTGAGGCCACCCAT+TGG	0.574683	4.2:+35434037	None:intergenic
AAATCTGTAGAAGTGAGAAA+GGG	0.579602	4.2:-35434181	MS.gene062978:CDS
TATATGTTGAAAGACATCTT+CGG	0.594082	4.2:+35434009	None:intergenic
TGAAAGACATCTTCGGTACA+CGG	0.612525	4.2:+35434016	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.648071	4.2:-35434049	MS.gene062978:CDS
CTTCGGTACACGGAATGGTG+AGG	0.664570	4.2:+35434026	None:intergenic
ATGTTGGAGAGAAACTGACG+CGG	0.811075	4.2:-35434144	MS.gene062978:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATATAACTTCTTGCTTGAAT+GGG	-	chr4.2:35434235-35434254	MS.gene062978:CDS	25.0%
!	TATATGTTGAAAGACATCTT+CGG	+	chr4.2:35434220-35434239	None:intergenic	25.0%
	AAAATCTGTAGAAGTGAGAA+AGG	-	chr4.2:35434044-35434063	MS.gene062978:CDS	30.0%
	AAATCTGTAGAAGTGAGAAA+GGG	-	chr4.2:35434045-35434064	MS.gene062978:CDS	30.0%
	CATATAACTTCTTGCTTGAA+TGG	-	chr4.2:35434234-35434253	MS.gene062978:CDS	30.0%
	CGTTTACACACTATTCTAAA+GGG	-	chr4.2:35433994-35434013	MS.gene062978:CDS	30.0%
	TTCAACAAGTCTTGAAATGA+TGG	+	chr4.2:35434138-35434157	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	-	chr4.2:35434174-35434193	MS.gene062978:CDS	30.0%
!!	ATTTCAAGACTTGTTGAATC+AGG	-	chr4.2:35434140-35434159	MS.gene062978:CDS	30.0%
!!	CCTTTAGAATAGTGTGTAAA+CGG	+	chr4.2:35433996-35434015	None:intergenic	30.0%
	ACAAGTCTTGAAATGATGGT+TGG	+	chr4.2:35434134-35434153	None:intergenic	35.0%
	CCGTTTACACACTATTCTAA+AGG	-	chr4.2:35433993-35434012	MS.gene062978:CDS	35.0%
	GTTTGGATATGATCATCCAA+TGG	-	chr4.2:35434173-35434192	MS.gene062978:CDS	35.0%
	AATCAGGCTGAAGAAGAGTT+TGG	-	chr4.2:35434156-35434175	MS.gene062978:CDS	40.0%
	TGAAAGACATCTTCGGTACA+CGG	+	chr4.2:35434213-35434232	None:intergenic	40.0%
!	GGTTGGTTCAAGTATGATAC+AGG	+	chr4.2:35434117-35434136	None:intergenic	40.0%
	ATGTTGGAGAGAAACTGACG+CGG	-	chr4.2:35434082-35434101	MS.gene062978:CDS	45.0%
	GGATATGATCATCCAATGGG+TGG	-	chr4.2:35434177-35434196	MS.gene062978:CDS	45.0%
	GGCTATGTTGCAGTGTATGT+TGG	-	chr4.2:35434066-35434085	MS.gene062978:CDS	45.0%
	GACATCTTCGGTACACGGAA+TGG	+	chr4.2:35434208-35434227	None:intergenic	50.0%
	CTTCGGTACACGGAATGGTG+AGG	+	chr4.2:35434203-35434222	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	+	chr4.2:35434192-35434211	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35433985	35434263	35433985	ID=MS.gene062978
chr4.2	mRNA	35433985	35434263	35433985	ID=MS.gene062978.t1;Parent=MS.gene062978
chr4.2	exon	35433985	35434263	35433985	ID=MS.gene062978.t1.exon1;Parent=MS.gene062978.t1
chr4.2	CDS	35433985	35434263	35433985	ID=cds.MS.gene062978.t1;Parent=MS.gene062978.t1

Gene Sequence	>MS.gene062978 ATGGGTTTCCGTTTACACACTATTCTAAAGGGTTCAGTAACTTCTAGTCAAGCAAAATCAAAATCTGTAGAAGTGAGAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACTGACGCGGTTTGTAGTTCCTGTATCATACTTGAACCAACCATCATTTCAAGACTTGTTGAATCAGGCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCGTGTACCGAAGATGTCTTTCAACATATAACTTCTTGCTTGAATGGGCCTTGA
Protein sequence	>MS.gene062978.t1 MGFRLHTILKGSVTSSQAKSKSVEVRKGYVAVYVGEKLTRFVVPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCTEDVFQHITSCLNGP