Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37562.t1 | XP_013444949.1 | 98.6 | 293 | 4 | 0 | 1 | 293 | 27 | 319 | 1.50E-170 | 608.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37562.t1 | Q9LEW8 | 79.3 | 294 | 60 | 1 | 1 | 293 | 33 | 326 | 7.4e-142 | 504.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37562.t1 | A0A072TNA5 | 98.6 | 293 | 4 | 0 | 1 | 293 | 27 | 319 | 1.1e-170 | 608.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene37562 | 0.853083 | 3.02E-61 | -1.69E-46 |
| MS.gene049171 | MS.gene37562 | 0.818535 | 1.86E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene37562 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene37562 | 0.850334 | 1.82E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene37562 | 0.833339 | 5.65E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene37562 | 0.829703 | 4.44E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene37562 | 0.817774 | 2.77E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene37562 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene37562 | 0.82502 | 5.88E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene37562 | 0.814027 | 1.90E-51 | -1.69E-46 |
| MS.gene04939 | MS.gene37562 | 0.829571 | 4.78E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene37562 | 0.84573 | 3.39E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene37562 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene37562 | 0.858918 | 5.92E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene37562 | 0.824702 | 7.00E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene37562 | 0.809687 | 1.67E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene37562 | 0.821594 | 3.72E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene37562 | 0.824269 | 8.84E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene37562 | 0.820393 | 7.02E-53 | -1.69E-46 |
| MS.gene050520 | MS.gene37562 | 0.840265 | 9.65E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene37562 | 0.817894 | 2.60E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene37562 | 0.800219 | 1.60E-48 | -1.69E-46 |
| MS.gene050675 | MS.gene37562 | 0.823499 | 1.34E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene37562 | 0.825741 | 3.97E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene37562 | 0.831569 | 1.55E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene37562 | 0.85443 | 1.24E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene37562 | 0.827628 | 1.41E-54 | -1.69E-46 |
| MS.gene05081 | MS.gene37562 | 0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene37562 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene37562 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene37562 | 0.810777 | 9.74E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene37562 | 0.814622 | 1.40E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene37562 | 0.834518 | 2.86E-56 | -1.69E-46 |
| MS.gene051167 | MS.gene37562 | -0.830561 | 2.74E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene37562 | 0.811418 | 7.07E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene37562 | 0.808283 | 3.34E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene37562 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene37562 | 0.821341 | 4.25E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene37562 | 0.806787 | 6.94E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene37562 | 0.822715 | 2.04E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene37562 | 0.834134 | 3.57E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene37562 | 0.824455 | 8.00E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene37562 | 0.836773 | 7.69E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene37562 | 0.811184 | 7.95E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene37562 | 0.820778 | 5.73E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene37562 | 0.847984 | 8.18E-60 | -1.69E-46 |
| MS.gene052484 | MS.gene37562 | 0.814331 | 1.63E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene37562 | 0.81256 | 3.99E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene37562 | 0.878586 | 2.49E-69 | -1.69E-46 |
| MS.gene052870 | MS.gene37562 | 0.803233 | 3.84E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene37562 | 0.808569 | 2.90E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene37562 | 0.816319 | 5.88E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene37562 | 0.812611 | 3.89E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene37562 | 0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene37562 | 0.877231 | 7.42E-69 | -1.69E-46 |
| MS.gene053209 | MS.gene37562 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene053213 | MS.gene37562 | 0.824416 | 8.17E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene37562 | 0.81447 | 1.52E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene37562 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene37562 | 0.834103 | 3.64E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene37562 | 0.804809 | 1.81E-49 | -1.69E-46 |
| MS.gene053626 | MS.gene37562 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene37562 | 0.898142 | 7.09E-77 | -1.69E-46 |
| MS.gene053813 | MS.gene37562 | 0.810675 | 1.02E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene37562 | 0.845387 | 4.19E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene37562 | 0.816441 | 5.52E-52 | -1.69E-46 |
| MS.gene053915 | MS.gene37562 | 0.843352 | 1.48E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene37562 | 0.867967 | 9.26E-66 | -1.69E-46 |
| MS.gene054595 | MS.gene37562 | 0.821865 | 3.22E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene37562 | 0.852111 | 5.72E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene37562 | 0.818367 | 2.03E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene37562 | 0.826582 | 2.51E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene37562 | 0.833752 | 4.45E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene37562 | 0.85264 | 4.04E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene37562 | 0.845163 | 4.82E-59 | -1.69E-46 |
| MS.gene055289 | MS.gene37562 | 0.812218 | 4.74E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene37562 | 0.825468 | 4.61E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene37562 | 0.806219 | 9.15E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene37562 | 0.830196 | 3.37E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene37562 | 0.839133 | 1.90E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene37562 | 0.828216 | 1.02E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene37562 | 0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene37562 | 0.841443 | 4.74E-58 | -1.69E-46 |
| MS.gene05602 | MS.gene37562 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene056409 | MS.gene37562 | 0.815552 | 8.72E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene37562 | 0.851572 | 8.13E-61 | -1.69E-46 |
| MS.gene056487 | MS.gene37562 | 0.832618 | 8.53E-56 | -1.69E-46 |
| MS.gene056609 | MS.gene37562 | 0.815612 | 8.45E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene37562 | 0.821625 | 3.66E-53 | -1.69E-46 |
| MS.gene057048 | MS.gene37562 | 0.823509 | 1.33E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene37562 | 0.842213 | 2.97E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene37562 | 0.830766 | 2.44E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene37562 | 0.837884 | 3.99E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene37562 | 0.805491 | 1.30E-49 | -1.69E-46 |
| MS.gene057289 | MS.gene37562 | 0.822677 | 2.08E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene37562 | 0.836411 | 9.50E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene37562 | 0.804921 | 1.71E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene37562 | 0.822086 | 2.86E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene37562 | 0.819378 | 1.20E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene37562 | 0.84141 | 4.83E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene37562 | 0.819517 | 1.11E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene37562 | 0.800248 | 1.58E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene37562 | 0.817033 | 4.07E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene37562 | 0.820567 | 6.41E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene37562 | 0.813531 | 2.44E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene37562 | 0.812831 | 3.48E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene37562 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene37562 | 0.806753 | 7.06E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene37562 | 0.806748 | 7.07E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene37562 | 0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene37562 | 0.827487 | 1.52E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene37562 | 0.819424 | 1.17E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene37562 | 0.817674 | 2.92E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene37562 | 0.840157 | 1.03E-57 | -1.69E-46 |
| MS.gene058948 | MS.gene37562 | 0.830784 | 2.42E-55 | -1.69E-46 |
| MS.gene058993 | MS.gene37562 | 0.824901 | 6.28E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene37562 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene37562 | 0.832622 | 8.51E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene37562 | 0.822247 | 2.62E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene37562 | 0.833351 | 5.61E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene37562 | 0.830712 | 2.52E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene37562 | 0.819777 | 9.72E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene37562 | 0.815045 | 1.13E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene37562 | 0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene37562 | 0.829582 | 4.75E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene37562 | 0.82128 | 4.39E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene37562 | 0.861264 | 1.16E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene37562 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene37562 | 0.814218 | 1.72E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene37562 | 0.817572 | 3.08E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene37562 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene37562 | 0.805549 | 1.27E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene37562 | 0.847113 | 1.42E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene37562 | 0.82237 | 2.46E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene37562 | 0.831787 | 1.37E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene37562 | 0.832373 | 9.81E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene37562 | 0.825369 | 4.87E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene37562 | 0.831936 | 1.26E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37562.t1 | MTR_8g032700 | 98.635 | 293 | 4 | 0 | 1 | 293 | 27 | 319 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37562.t1 | AT3G61080 | 79.252 | 294 | 60 | 1 | 1 | 293 | 33 | 326 | 1.02e-180 | 501 |
| MS.gene37562.t1 | AT3G61080 | 72.812 | 320 | 60 | 2 | 1 | 293 | 33 | 352 | 3.20e-175 | 488 |
Find 75 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGGAATTCATAGAATT+TGG | 0.175018 | 8.3:-61051947 | MS.gene37562:CDS |
| TGGTGGTTCTTTCATCATTA+TGG | 0.241705 | 8.3:-61051963 | MS.gene37562:CDS |
| CTTGCTTCCCAGTCTGTTCT+AGG | 0.246454 | 8.3:-61051850 | MS.gene37562:intron |
| GAGGCTGAGGCTCTTGGTTT+AGG | 0.263673 | 8.3:-61052330 | MS.gene37562:CDS |
| ATATAGTGACAGGACCATTT+TGG | 0.278148 | 8.3:-61051560 | MS.gene37562:CDS |
| TTCTCAAAGCCTGGCTGTTT+AGG | 0.296943 | 8.3:+61049631 | None:intergenic |
| TTAAATCATTACAATCTCTT+TGG | 0.303968 | 8.3:-61049577 | MS.gene37562:CDS |
| GGACACAATGAGGCAGAATT+TGG | 0.321866 | 8.3:-61049937 | MS.gene37562:CDS |
| ATGTCTTGGTGTGCTGGCTT+TGG | 0.369964 | 8.3:-61049913 | MS.gene37562:CDS |
| GGAAAATCTAGTAAAGGCTT+TGG | 0.375064 | 8.3:-61051799 | MS.gene37562:CDS |
| AAATGGAGAGCCTGTCATAT+TGG | 0.375682 | 8.3:-61050353 | MS.gene37562:CDS |
| TTTGGTATGTCTTGGTGTGC+TGG | 0.381004 | 8.3:-61049919 | MS.gene37562:CDS |
| AAATGGTCCTGTCACTATAT+TGG | 0.394002 | 8.3:+61051563 | None:intergenic |
| GCCTCAGCCTCAAACATTGA+TGG | 0.401168 | 8.3:+61052342 | None:intergenic |
| TCCATCAATGTTTGAGGCTG+AGG | 0.407876 | 8.3:-61052343 | MS.gene37562:CDS |
| CATTACAATCTCTTTGGCTC+TGG | 0.413408 | 8.3:-61049571 | MS.gene37562:CDS |
| TCTTGGTGTGCTGGCTTTGG+AGG | 0.425900 | 8.3:-61049910 | MS.gene37562:CDS |
| CTTGCGCAAATGCACAAATC+AGG | 0.431172 | 8.3:-61051820 | MS.gene37562:CDS |
| ATGTTTGAGGCTGAGGCTCT+TGG | 0.432655 | 8.3:-61052336 | MS.gene37562:CDS |
| TTGATACAACCACCACCAAC+TGG | 0.433145 | 8.3:+61052526 | None:intergenic |
| ATTAGTGTGCAGCATGAGTA+AGG | 0.434515 | 8.3:-61052608 | None:intergenic |
| TTAGGAGCTATGTATGAAAC+CGG | 0.444488 | 8.3:-61052312 | MS.gene37562:CDS |
| GGTCGAATGCCAGCTGCAAC+TGG | 0.448517 | 8.3:+61051584 | None:intergenic |
| CATTCTTTGTCAAAACAAAC+AGG | 0.455546 | 8.3:-61052471 | MS.gene37562:intron |
| TCTCTCCTCTTCTCAAAGCC+TGG | 0.466803 | 8.3:+61049622 | None:intergenic |
| AATAGTGATACAGCAGGTAT+AGG | 0.467243 | 8.3:+61049599 | None:intergenic |
| TAGGTTGGATCGCTACCGTC+TGG | 0.477825 | 8.3:-61051983 | MS.gene37562:CDS |
| GAGAGAATCCACTCACGAAC+CGG | 0.479292 | 8.3:+61052583 | None:intergenic |
| CTTGACTTACAATAACATGC+TGG | 0.482072 | 8.3:+61050328 | None:intergenic |
| GCTTGCTACATGGAGATCTC+TGG | 0.484204 | 8.3:-61050399 | MS.gene37562:CDS |
| TTCTACAGGGCAGAGATTGG+TGG | 0.485981 | 8.3:-61050464 | MS.gene37562:intron |
| AAACTCTATATCAGGAGTAT+TGG | 0.488540 | 8.3:-61052366 | MS.gene37562:intron |
| CTGAATCCAGTCTGAAGACC+AGG | 0.506368 | 8.3:+61051633 | None:intergenic |
| TAAATACCTGGTCTTCAGAC+TGG | 0.506390 | 8.3:-61051639 | MS.gene37562:CDS |
| TTGTTCTACAGGGCAGAGAT+TGG | 0.509329 | 8.3:-61050467 | MS.gene37562:intron |
| ATGGAATTCATAGAATTTGG+CGG | 0.510748 | 8.3:-61051944 | MS.gene37562:CDS |
| ATAACCAATGTTAGTCCAGT+TGG | 0.517703 | 8.3:-61052541 | MS.gene37562:CDS |
| ATTTGGCGGATCTAGAGATC+AGG | 0.518102 | 8.3:-61051930 | MS.gene37562:intron |
| TATTGGTCCATCAATGTTTG+AGG | 0.530105 | 8.3:-61052349 | MS.gene37562:CDS |
| GTGCAGCATGAGTAAGGATC+CGG | 0.532558 | 8.3:-61052602 | None:intergenic |
| CTTAGGCACACGGATGGTCC+CGG | 0.538613 | 8.3:+61052293 | None:intergenic |
| ACGTTGAAAACACCATTGGC+AGG | 0.540479 | 8.3:-61051771 | MS.gene37562:intron |
| ATTAGGTTACCAGTTGCAGC+TGG | 0.542187 | 8.3:-61051593 | MS.gene37562:CDS |
| CCGTGTGCCTAAGCCGTACA+AGG | 0.543019 | 8.3:-61052283 | MS.gene37562:intron |
| AACAGCCAGGCTTTGAGAAG+AGG | 0.543273 | 8.3:-61049627 | MS.gene37562:CDS |
| AATCGCTATGATACTGATGC+TGG | 0.547084 | 8.3:-61052496 | MS.gene37562:CDS |
| AAATCAGGAAAATCTAGTAA+AGG | 0.552473 | 8.3:-61051805 | MS.gene37562:CDS |
| CTTCCCAGTCTGTTCTAGGA+AGG | 0.552709 | 8.3:-61051846 | MS.gene37562:intron |
| ATAGAACCATGCTTGCTACA+TGG | 0.553025 | 8.3:-61050409 | MS.gene37562:CDS |
| CCTTGTACGGCTTAGGCACA+CGG | 0.555435 | 8.3:+61052283 | None:intergenic |
| TTCGACGTTGAAAACACCAT+TGG | 0.558330 | 8.3:-61051775 | MS.gene37562:CDS |
| TTTCTCACCTTGTACGGCTT+AGG | 0.559656 | 8.3:+61052276 | None:intergenic |
| CATGCTGGGTCCAATATGAC+AGG | 0.564436 | 8.3:+61050343 | None:intergenic |
| TACAATAACATACCTGCCAA+TGG | 0.575680 | 8.3:+61051759 | None:intergenic |
| ACCACCAACTGGACTAACAT+TGG | 0.576723 | 8.3:+61052537 | None:intergenic |
| ACCAATGTTAGTCCAGTTGG+TGG | 0.577161 | 8.3:-61052538 | MS.gene37562:CDS |
| AGGCAGAATTTGGTATGTCT+TGG | 0.577942 | 8.3:-61049927 | MS.gene37562:CDS |
| CATTCGACCAATATAGTGAC+AGG | 0.579217 | 8.3:-61051570 | MS.gene37562:CDS |
| AATGTTAGTCCAGTTGGTGG+TGG | 0.583417 | 8.3:-61052535 | MS.gene37562:CDS |
| AGATCTCCATGTAGCAAGCA+TGG | 0.585342 | 8.3:+61050403 | None:intergenic |
| CGTGAGTGGATTCTCTCTGA+AGG | 0.586932 | 8.3:-61052577 | MS.gene37562:CDS |
| GATTTAAATAGTGATACAGC+AGG | 0.595693 | 8.3:+61049593 | None:intergenic |
| GTAAGGATCCGGTTCGTGAG+TGG | 0.599596 | 8.3:-61052591 | MS.gene37562:CDS |
| TTGACTTACAATAACATGCT+GGG | 0.601426 | 8.3:+61050329 | None:intergenic |
| CAGGTAATACCTAAACAGCC+AGG | 0.608808 | 8.3:-61049640 | MS.gene37562:CDS |
| TTCAATAGATGGACACAATG+AGG | 0.613547 | 8.3:-61049947 | MS.gene37562:intron |
| TGCGCCGCTGTTTGACAATG+TGG | 0.631695 | 8.3:-61050434 | MS.gene37562:CDS |
| GTACGGCTTAGGCACACGGA+TGG | 0.632306 | 8.3:+61052287 | None:intergenic |
| GTTGGATCGCTACCGTCTGG+TGG | 0.633372 | 8.3:-61051980 | MS.gene37562:CDS |
| GAAGACCAGGTATTTATCTG+TGG | 0.641183 | 8.3:+61051646 | None:intergenic |
| CTACATGGAGATCTCTGGAG+TGG | 0.660267 | 8.3:-61050394 | MS.gene37562:CDS |
| ATCTCCACATTGTCAAACAG+CGG | 0.668969 | 8.3:+61050430 | None:intergenic |
| TAGGAGCTATGTATGAAACC+GGG | 0.680788 | 8.3:-61052311 | MS.gene37562:CDS |
| GCACACCACAGATAAATACC+TGG | 0.681671 | 8.3:-61051651 | MS.gene37562:CDS |
| ATGATGAAAGAACCACCAGA+CGG | 0.702040 | 8.3:+61051968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAATTTAGTAAAAATTG+TGG | - | chr8.3:61051236-61051255 | MS.gene37562:intron | 15.0% |
| !! | AACAATCATACAATCATATA+AGG | - | chr8.3:61052116-61052135 | MS.gene37562:intron | 20.0% |
| !! | ATTATGGAATTCATAGAATT+TGG | - | chr8.3:61050161-61050180 | MS.gene37562:intron | 20.0% |
| !! | GAGAAAATATCATAAACAAA+TGG | + | chr8.3:61051541-61051560 | None:intergenic | 20.0% |
| !! | GTATGTTATTGTAATTGTTA+TGG | - | chr8.3:61050359-61050378 | MS.gene37562:CDS | 20.0% |
| !! | TTAAATCATTACAATCTCTT+TGG | - | chr8.3:61052531-61052550 | MS.gene37562:CDS | 20.0% |
| !! | TTATAATGATATAAGTGTAC+TGG | - | chr8.3:61051577-61051596 | MS.gene37562:CDS | 20.0% |
| !! | TTGAAATTAACAACATGTAT+CGG | - | chr8.3:61049947-61049966 | MS.gene37562:intron | 20.0% |
| !! | TTTATATTGAATAAACTGAG+CGG | - | chr8.3:61050664-61050683 | MS.gene37562:intron | 20.0% |
| !!! | ATTCTATAACTCTTATTTTG+AGG | - | chr8.3:61052224-61052243 | MS.gene37562:intron | 20.0% |
| !!! | TAATTTTAAATAATCTCTCC+AGG | - | chr8.3:61052449-61052468 | MS.gene37562:intron | 20.0% |
| !!! | TCATTTTCTCACATTATTAT+CGG | + | chr8.3:61049922-61049941 | None:intergenic | 20.0% |
| !!! | TTCACTAAATCAGTTTTAAA+TGG | - | chr8.3:61050838-61050857 | MS.gene37562:intron | 20.0% |
| ! | AAATCAGGAAAATCTAGTAA+AGG | - | chr8.3:61050303-61050322 | MS.gene37562:intron | 25.0% |
| ! | AAATGGCCATTAATTTAGAT+CGG | - | chr8.3:61050855-61050874 | MS.gene37562:intron | 25.0% |
| ! | AAATGTCATACACTAAAATC+AGG | + | chr8.3:61050647-61050666 | None:intergenic | 25.0% |
| ! | AATATACTACCTTCAAATAG+AGG | - | chr8.3:61051074-61051093 | MS.gene37562:intron | 25.0% |
| ! | ATCACGATGTAAATTAATCA+CGG | - | chr8.3:61051161-61051180 | MS.gene37562:intron | 25.0% |
| ! | ATTACATCAAGTTTACAATC+CGG | - | chr8.3:61050730-61050749 | MS.gene37562:intron | 25.0% |
| ! | ATTGCAAAAAACGAATCAAA+CGG | + | chr8.3:61051922-61051941 | None:intergenic | 25.0% |
| ! | ATTTATAAGAAGCTGTTGTT+TGG | - | chr8.3:61051804-61051823 | MS.gene37562:CDS | 25.0% |
| ! | TGTCATATATCATTGTATGT+TGG | - | chr8.3:61049970-61049989 | MS.gene37562:intron | 25.0% |
| ! | TTATATTGAATAAACTGAGC+GGG | - | chr8.3:61050665-61050684 | MS.gene37562:intron | 25.0% |
| !! | AAAGTTACCTTTTTCCAAAA+TGG | + | chr8.3:61050565-61050584 | None:intergenic | 25.0% |
| !! | CAAGAGTATATGTAAAAACA+AGG | + | chr8.3:61051018-61051037 | None:intergenic | 25.0% |
| !! | GGTTTTTATCCATAAAAACA+GGG | - | chr8.3:61051257-61051276 | MS.gene37562:intron | 25.0% |
| !! | TAAAATTTTCTCACCTTGTA+CGG | + | chr8.3:61049841-61049860 | None:intergenic | 25.0% |
| !! | TGGTTTTTATCCATAAAAAC+AGG | - | chr8.3:61051256-61051275 | MS.gene37562:intron | 25.0% |
| !!! | AAATCGTAGAGTTTTATTGA+AGG | + | chr8.3:61051608-61051627 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTACATATACTCT+TGG | - | chr8.3:61051016-61051035 | MS.gene37562:intron | 25.0% |
| AAACCTTGATTAGATATTGC+AGG | - | chr8.3:61051454-61051473 | MS.gene37562:intron | 30.0% | |
| AAAGACTTTAACTGATATGC+AGG | - | chr8.3:61052019-61052038 | MS.gene37562:intron | 30.0% | |
| AACTTATTGCTAGGATTTGT+AGG | - | chr8.3:61050106-61050125 | MS.gene37562:intron | 30.0% | |
| AATTGGGATAACTTATTGCT+AGG | - | chr8.3:61050097-61050116 | MS.gene37562:intron | 30.0% | |
| ACTGTACGATCTTAAATCAA+TGG | + | chr8.3:61050806-61050825 | None:intergenic | 30.0% | |
| ATGGAATTCATAGAATTTGG+CGG | - | chr8.3:61050164-61050183 | MS.gene37562:intron | 30.0% | |
| CAACAATGTGACTATATGTT+GGG | - | chr8.3:61052339-61052358 | MS.gene37562:CDS | 30.0% | |
| CATTCTTTGTCAAAACAAAC+AGG | - | chr8.3:61049637-61049656 | MS.gene37562:CDS | 30.0% | |
| GAAAGTTGAAACTCTATATC+AGG | - | chr8.3:61049734-61049753 | MS.gene37562:intron | 30.0% | |
| GATTTAAATAGTGATACAGC+AGG | + | chr8.3:61052518-61052537 | None:intergenic | 30.0% | |
| GATTTAGTGAATGTGTAATC+TGG | + | chr8.3:61050829-61050848 | None:intergenic | 30.0% | |
| GTTTACTGCATAGTGAAAAT+AGG | - | chr8.3:61050933-61050952 | MS.gene37562:intron | 30.0% | |
| TAGTAGTACTGTCACTATAT+TGG | + | chr8.3:61050591-61050610 | None:intergenic | 30.0% | |
| TATCATTGTATGTTGGACAT+TGG | - | chr8.3:61049977-61049996 | MS.gene37562:intron | 30.0% | |
| TCAACAATGTGACTATATGT+TGG | - | chr8.3:61052338-61052357 | MS.gene37562:CDS | 30.0% | |
| TCACGATGTAAATTAATCAC+GGG | - | chr8.3:61051162-61051181 | MS.gene37562:intron | 30.0% | |
| TTGACTTACAATAACATGCT+GGG | + | chr8.3:61051782-61051801 | None:intergenic | 30.0% | |
| TTGTTCTAGTCTCACATATT+TGG | + | chr8.3:61052101-61052120 | None:intergenic | 30.0% | |
| TTTCACTATGCAGTAAACTT+GGG | + | chr8.3:61050931-61050950 | None:intergenic | 30.0% | |
| TTTGTGCACACAATTTCAAT+TGG | + | chr8.3:61050691-61050710 | None:intergenic | 30.0% | |
| ! | AAACTCTATATCAGGAGTAT+TGG | - | chr8.3:61049742-61049761 | MS.gene37562:intron | 30.0% |
| ! | AACATAAGCTCTGACAAAAA+TGG | - | chr8.3:61051738-61051757 | MS.gene37562:intron | 30.0% |
| ! | ATACTGTCATTTCAGATTGA+AGG | + | chr8.3:61050008-61050027 | None:intergenic | 30.0% |
| ! | GTTCTAATAAGAAGTACAAG+CGG | - | chr8.3:61050219-61050238 | MS.gene37562:intron | 30.0% |
| ! | TAACTGTGAGCTTTTATTAC+TGG | + | chr8.3:61050763-61050782 | None:intergenic | 30.0% |
| ! | TGAAGGTAGTATATTCCTTT+TGG | + | chr8.3:61051069-61051088 | None:intergenic | 30.0% |
| ! | TTTTATTACTGGAAGGAATC+CGG | + | chr8.3:61050752-61050771 | None:intergenic | 30.0% |
| ! | TTTTCACTATGCAGTAAACT+TGG | + | chr8.3:61050932-61050951 | None:intergenic | 30.0% |
| !! | TAGTTTGTTCGAAGGAAATT+GGG | - | chr8.3:61050081-61050100 | MS.gene37562:intron | 30.0% |
| !!! | GTTTTTACTAGTTTGTTCGA+AGG | - | chr8.3:61050073-61050092 | MS.gene37562:intron | 30.0% |
| !!! | TCAATGGTCGAGATTTTTTA+CGG | + | chr8.3:61050790-61050809 | None:intergenic | 30.0% |
| !!! | TTCTGCTGTTTTTCTTTTGA+TGG | - | chr8.3:61049683-61049702 | MS.gene37562:intron | 30.0% |
| AAATCAGCGAATGGAAAGAA+CGG | + | chr8.3:61050614-61050633 | None:intergenic | 35.0% | |
| AAATGGTCCTGTCACTATAT+TGG | + | chr8.3:61050548-61050567 | None:intergenic | 35.0% | |
| AACCCTCCGATCTAAATTAA+TGG | + | chr8.3:61050864-61050883 | None:intergenic | 35.0% | |
| AATAGTGATACAGCAGGTAT+AGG | + | chr8.3:61052512-61052531 | None:intergenic | 35.0% | |
| AGCTTGCAACTAATACTTCT+AGG | + | chr8.3:61052045-61052064 | None:intergenic | 35.0% | |
| ATAACCAATGTTAGTCCAGT+TGG | - | chr8.3:61049567-61049586 | MS.gene37562:CDS | 35.0% | |
| ATACACTAAAATCAGGTGCA+AGG | + | chr8.3:61050640-61050659 | None:intergenic | 35.0% | |
| CTTGACTTACAATAACATGC+TGG | + | chr8.3:61051783-61051802 | None:intergenic | 35.0% | |
| GGAAAATCTAGTAAAGGCTT+TGG | - | chr8.3:61050309-61050328 | MS.gene37562:intron | 35.0% | |
| GTCAAAACAAACAGGTAGTA+TGG | - | chr8.3:61049645-61049664 | MS.gene37562:intron | 35.0% | |
| TACAATAACATACCTGCCAA+TGG | + | chr8.3:61050352-61050371 | None:intergenic | 35.0% | |
| TACTGCATAGTGAAAATAGG+AGG | - | chr8.3:61050936-61050955 | MS.gene37562:intron | 35.0% | |
| TAGCCTGCAATATCTAATCA+AGG | + | chr8.3:61051460-61051479 | None:intergenic | 35.0% | |
| TAGTAAGTTGTGAAGGAATC+AGG | - | chr8.3:61050042-61050061 | MS.gene37562:intron | 35.0% | |
| TATGCAGTAAACTTGGGAAA+TGG | + | chr8.3:61050925-61050944 | None:intergenic | 35.0% | |
| TATTGCTAGGATTTGTAGGT+TGG | - | chr8.3:61050110-61050129 | MS.gene37562:intron | 35.0% | |
| TATTGGTCCATCAATGTTTG+AGG | - | chr8.3:61049759-61049778 | MS.gene37562:intron | 35.0% | |
| TGGTGGTTCTTTCATCATTA+TGG | - | chr8.3:61050145-61050164 | MS.gene37562:intron | 35.0% | |
| TGTCTCAGACACTTATTCAT+AGG | + | chr8.3:61051044-61051063 | None:intergenic | 35.0% | |
| TTAGCAGTAGTAAGTTGTGA+AGG | - | chr8.3:61050035-61050054 | MS.gene37562:intron | 35.0% | |
| TTAGGAGCTATGTATGAAAC+CGG | - | chr8.3:61049796-61049815 | MS.gene37562:intron | 35.0% | |
| TTCAATAGATGGACACAATG+AGG | - | chr8.3:61052161-61052180 | MS.gene37562:intron | 35.0% | |
| TTGTTTGGCAACCTATGTTT+GGG | - | chr8.3:61051819-61051838 | MS.gene37562:CDS | 35.0% | |
| ! | AGGAGGCTATTATTTTCTTG+AGG | - | chr8.3:61050953-61050972 | MS.gene37562:intron | 35.0% |
| ! | ATATAGTGACAGGACCATTT+TGG | - | chr8.3:61050548-61050567 | MS.gene37562:intron | 35.0% |
| ! | ATGCTGTCTTGTTCAATAGA+TGG | - | chr8.3:61052150-61052169 | MS.gene37562:intron | 35.0% |
| ! | CACAGTTGTTTCCATGATTT+CGG | - | chr8.3:61051349-61051368 | MS.gene37562:intron | 35.0% |
| ! | TCAGACTGGATTCAGTTTTA+CGG | - | chr8.3:61050483-61050502 | MS.gene37562:intron | 35.0% |
| ! | TGTGAGCTTTTATTACTGGA+AGG | + | chr8.3:61050759-61050778 | None:intergenic | 35.0% |
| ! | TTTGGGACTGGATTATCTTA+GGG | - | chr8.3:61051836-61051855 | MS.gene37562:CDS | 35.0% |
| !! | ATCTGATTGACTTGTTCTAC+AGG | - | chr8.3:61051630-61051649 | MS.gene37562:CDS | 35.0% |
| !! | CTAGTTTGTTCGAAGGAAAT+TGG | - | chr8.3:61050080-61050099 | MS.gene37562:intron | 35.0% |
| !! | TCTGATTGACTTGTTCTACA+GGG | - | chr8.3:61051631-61051650 | MS.gene37562:CDS | 35.0% |
| !!! | AGGGTTCTCAGTCTATTTTT+TGG | - | chr8.3:61051276-61051295 | MS.gene37562:intron | 35.0% |
| !!! | AGTCTATTTTTTGGGAACGT+TGG | - | chr8.3:61051285-61051304 | MS.gene37562:intron | 35.0% |
| !!! | GGGTTCTCAGTCTATTTTTT+GGG | - | chr8.3:61051277-61051296 | MS.gene37562:intron | 35.0% |
| !!! | GTAGAGTTTTATTGAAGGAG+AGG | + | chr8.3:61051603-61051622 | None:intergenic | 35.0% |
| !!! | TCAAACGGTCTCTTTTTTGT+TGG | + | chr8.3:61051907-61051926 | None:intergenic | 35.0% |
| !!! | TTCTTTCCATTCGCTGATTT+TGG | - | chr8.3:61050614-61050633 | MS.gene37562:intron | 35.0% |
| AAATGGAGAGCCTGTCATAT+TGG | - | chr8.3:61051755-61051774 | MS.gene37562:intron | 40.0% | |
| AATCGCTATGATACTGATGC+TGG | - | chr8.3:61049612-61049631 | MS.gene37562:CDS | 40.0% | |
| ACATCCTGTTACCGTGAAAA+CGG | + | chr8.3:61051428-61051447 | None:intergenic | 40.0% | |
| ACCATAGTGAACCGAAATCA+TGG | + | chr8.3:61051363-61051382 | None:intergenic | 40.0% | |
| AGGCAGAATTTGGTATGTCT+TGG | - | chr8.3:61052181-61052200 | MS.gene37562:intron | 40.0% | |
| ATCTCCACATTGTCAAACAG+CGG | + | chr8.3:61051681-61051700 | None:intergenic | 40.0% | |
| ATGATGAAAGAACCACCAGA+CGG | + | chr8.3:61050143-61050162 | None:intergenic | 40.0% | |
| CATTCGACCAATATAGTGAC+AGG | - | chr8.3:61050538-61050557 | MS.gene37562:intron | 40.0% | |
| CGAATTACAACCAAAGCTAG+AGG | + | chr8.3:61052072-61052091 | None:intergenic | 40.0% | |
| CGTTAAGGAACTTGCGATTT+CGG | - | chr8.3:61051106-61051125 | MS.gene37562:intron | 40.0% | |
| GAAGACCAGGTATTTATCTG+TGG | + | chr8.3:61050465-61050484 | None:intergenic | 40.0% | |
| GATAATCCAGTCCCAAACAT+AGG | + | chr8.3:61051833-61051852 | None:intergenic | 40.0% | |
| GGCCATTAATTTAGATCGGA+GGG | - | chr8.3:61050859-61050878 | MS.gene37562:intron | 40.0% | |
| GTCACATTGTTGAGCAAGAA+TGG | + | chr8.3:61052331-61052350 | None:intergenic | 40.0% | |
| GTTGTTTGGCAACCTATGTT+TGG | - | chr8.3:61051818-61051837 | MS.gene37562:CDS | 40.0% | |
| TAATTTAGATCGGAGGGTTG+AGG | - | chr8.3:61050865-61050884 | MS.gene37562:intron | 40.0% | |
| TAGGAGCTATGTATGAAACC+GGG | - | chr8.3:61049797-61049816 | MS.gene37562:intron | 40.0% | |
| TATCTTAGGGTGTAACGAGT+CGG | - | chr8.3:61051849-61051868 | MS.gene37562:intron | 40.0% | |
| TCCATGATTTCGGTTCACTA+TGG | - | chr8.3:61051359-61051378 | MS.gene37562:intron | 40.0% | |
| TGGCCATTAATTTAGATCGG+AGG | - | chr8.3:61050858-61050877 | MS.gene37562:intron | 40.0% | |
| TTCGACGTTGAAAACACCAT+TGG | - | chr8.3:61050333-61050352 | MS.gene37562:intron | 40.0% | |
| TTGTTTGATGCAGTTACTGC+AGG | - | chr8.3:61050895-61050914 | MS.gene37562:intron | 40.0% | |
| ! | AGTGTCTGAGACAAACCAAA+AGG | - | chr8.3:61051051-61051070 | MS.gene37562:intron | 40.0% |
| ! | ATAGAACCATGCTTGCTACA+TGG | - | chr8.3:61051699-61051718 | MS.gene37562:intron | 40.0% |
| ! | CATTACAATCTCTTTGGCTC+TGG | - | chr8.3:61052537-61052556 | MS.gene37562:CDS | 40.0% |
| ! | CTATCCATACCTTTTTGTCG+CGG | - | chr8.3:61051402-61051421 | MS.gene37562:intron | 40.0% |
| ! | GTTTGGGACTGGATTATCTT+AGG | - | chr8.3:61051835-61051854 | MS.gene37562:CDS | 40.0% |
| ! | TAAATACCTGGTCTTCAGAC+TGG | - | chr8.3:61050469-61050488 | MS.gene37562:intron | 40.0% |
| ! | TGATGGTGTGAGCTATTTGT+TGG | - | chr8.3:61049700-61049719 | MS.gene37562:intron | 40.0% |
| !! | GACAGGACCATTTTGGAAAA+AGG | - | chr8.3:61050555-61050574 | MS.gene37562:intron | 40.0% |
| !!! | CGGTCTCTTTTTTGTTGGTT+AGG | + | chr8.3:61051902-61051921 | None:intergenic | 40.0% |
| !!! | GACTGAGAACCCTGTTTTTA+TGG | + | chr8.3:61051269-61051288 | None:intergenic | 40.0% |
| AAGAGCCAAACCATGAAGAG+CGG | - | chr8.3:61051959-61051978 | MS.gene37562:CDS | 45.0% | |
| ACAAACACAGACACAGAAGC+TGG | - | chr8.3:61049874-61049893 | MS.gene37562:intron | 45.0% | |
| ACCAATGTTAGTCCAGTTGG+TGG | - | chr8.3:61049570-61049589 | MS.gene37562:CDS | 45.0% | |
| ACCACCAACTGGACTAACAT+TGG | + | chr8.3:61049574-61049593 | None:intergenic | 45.0% | |
| ACGTTGAAAACACCATTGGC+AGG | - | chr8.3:61050337-61050356 | MS.gene37562:intron | 45.0% | |
| ACTTGCGATTTCGGCTGTTA+CGG | - | chr8.3:61051115-61051134 | MS.gene37562:intron | 45.0% | |
| AGATCTCCATGTAGCAAGCA+TGG | + | chr8.3:61051708-61051727 | None:intergenic | 45.0% | |
| ATTAGGTTACCAGTTGCAGC+TGG | - | chr8.3:61050515-61050534 | MS.gene37562:intron | 45.0% | |
| CAGGTAATACCTAAACAGCC+AGG | - | chr8.3:61052468-61052487 | MS.gene37562:intron | 45.0% | |
| CGACTGTGACCTCTATTTGA+AGG | + | chr8.3:61051086-61051105 | None:intergenic | 45.0% | |
| CTGGCTGTTTAGGTATTACC+TGG | + | chr8.3:61052470-61052489 | None:intergenic | 45.0% | |
| CTGTTACGGATGTTGCGTTA+CGG | - | chr8.3:61051129-61051148 | MS.gene37562:intron | 45.0% | |
| CTTCCTTCCTAGAACAGACT+GGG | + | chr8.3:61050268-61050287 | None:intergenic | 45.0% | |
| CTTGCGCAAATGCACAAATC+AGG | - | chr8.3:61050288-61050307 | MS.gene37562:intron | 45.0% | |
| GCACACCACAGATAAATACC+TGG | - | chr8.3:61050457-61050476 | MS.gene37562:CDS | 45.0% | |
| GGACACAATGAGGCAGAATT+TGG | - | chr8.3:61052171-61052190 | MS.gene37562:intron | 45.0% | |
| TTCTCAAAGCCTGGCTGTTT+AGG | + | chr8.3:61052480-61052499 | None:intergenic | 45.0% | |
| TTGATACAACCACCACCAAC+TGG | + | chr8.3:61049585-61049604 | None:intergenic | 45.0% | |
| TTGTTCTACAGGGCAGAGAT+TGG | - | chr8.3:61051641-61051660 | MS.gene37562:CDS | 45.0% | |
| TTTCTCACCTTGTACGGCTT+AGG | + | chr8.3:61049835-61049854 | None:intergenic | 45.0% | |
| ! | ATTTGGCGGATCTAGAGATC+AGG | - | chr8.3:61050178-61050197 | MS.gene37562:intron | 45.0% |
| ! | CAAGCTAGAACCTCTAGCTT+TGG | - | chr8.3:61052059-61052078 | MS.gene37562:intron | 45.0% |
| ! | TCCATCAATGTTTGAGGCTG+AGG | - | chr8.3:61049765-61049784 | MS.gene37562:intron | 45.0% |
| ! | TTTGGTATGTCTTGGTGTGC+TGG | - | chr8.3:61052189-61052208 | MS.gene37562:intron | 45.0% |
| ! | TTTTACGGCGAGCACAGATT+AGG | - | chr8.3:61050498-61050517 | MS.gene37562:intron | 45.0% |
| !! | AATGTTAGTCCAGTTGGTGG+TGG | - | chr8.3:61049573-61049592 | MS.gene37562:CDS | 45.0% |
| AGAGCCAAACCATGAAGAGC+GGG | - | chr8.3:61051960-61051979 | MS.gene37562:CDS | 50.0% | |
| CATGCTGGGTCCAATATGAC+AGG | + | chr8.3:61051768-61051787 | None:intergenic | 50.0% | |
| CTGAATCCAGTCTGAAGACC+AGG | + | chr8.3:61050478-61050497 | None:intergenic | 50.0% | |
| CTTGCTTCCCAGTCTGTTCT+AGG | - | chr8.3:61050258-61050277 | MS.gene37562:intron | 50.0% | |
| GAGAGAATCCACTCACGAAC+CGG | + | chr8.3:61049528-61049547 | None:intergenic | 50.0% | |
| GCAAGGCCAAAATCAGCGAA+TGG | + | chr8.3:61050623-61050642 | None:intergenic | 50.0% | |
| GCCATAACAGGGTTTCGTCA+CGG | - | chr8.3:61051307-61051326 | MS.gene37562:intron | 50.0% | |
| GCCTCAGCCTCAAACATTGA+TGG | + | chr8.3:61049769-61049788 | None:intergenic | 50.0% | |
| GCTTCCTTCCTAGAACAGAC+TGG | + | chr8.3:61050269-61050288 | None:intergenic | 50.0% | |
| TAGAGGTCACAGTCGCGTTA+AGG | - | chr8.3:61051091-61051110 | MS.gene37562:intron | 50.0% | |
| TAGGGTGTAACGAGTCGGTT+TGG | - | chr8.3:61051854-61051873 | MS.gene37562:intron | 50.0% | |
| TCTCTCCTCTTCTCAAAGCC+TGG | + | chr8.3:61052489-61052508 | None:intergenic | 50.0% | |
| TGAAAACGGCCGCGACAAAA+AGG | + | chr8.3:61051414-61051433 | None:intergenic | 50.0% | |
| TGGGAACGTTGGCCATAACA+GGG | - | chr8.3:61051296-61051315 | MS.gene37562:intron | 50.0% | |
| TTAGATCGGAGGGTTGAGGT+CGG | - | chr8.3:61050869-61050888 | MS.gene37562:intron | 50.0% | |
| TTCTACAGGGCAGAGATTGG+TGG | - | chr8.3:61051644-61051663 | MS.gene37562:CDS | 50.0% | |
| TTGGGAACGTTGGCCATAAC+AGG | - | chr8.3:61051295-61051314 | MS.gene37562:intron | 50.0% | |
| ! | ATGTTTGAGGCTGAGGCTCT+TGG | - | chr8.3:61049772-61049791 | MS.gene37562:intron | 50.0% |
| ! | CGTGAGTGGATTCTCTCTGA+AGG | - | chr8.3:61049531-61049550 | MS.gene37562:CDS | 50.0% |
| ! | CTACATGGAGATCTCTGGAG+TGG | - | chr8.3:61051714-61051733 | MS.gene37562:intron | 50.0% |
| ! | GCTTGCTACATGGAGATCTC+TGG | - | chr8.3:61051709-61051728 | MS.gene37562:intron | 50.0% |
| ! | TGGCAACCTATGTTTGGGAC+TGG | - | chr8.3:61051824-61051843 | MS.gene37562:CDS | 50.0% |
| !! | AACAGCCAGGCTTTGAGAAG+AGG | - | chr8.3:61052481-61052500 | MS.gene37562:CDS | 50.0% |
| !! | AAGAGCGGGTTGGTTTGGTT+CGG | - | chr8.3:61051974-61051993 | MS.gene37562:CDS | 50.0% |
| !! | ATGTCTTGGTGTGCTGGCTT+TGG | - | chr8.3:61052195-61052214 | MS.gene37562:intron | 50.0% |
| !! | CTTCCCAGTCTGTTCTAGGA+AGG | - | chr8.3:61050262-61050281 | MS.gene37562:intron | 50.0% |
| !! | GCTCTTCATGGTTTGGCTCT+TGG | + | chr8.3:61051960-61051979 | None:intergenic | 50.0% |
| !! | GGTTGGTTTGGTTCGGATCA+AGG | - | chr8.3:61051981-61052000 | MS.gene37562:CDS | 50.0% |
| !! | TTTTGTCGCGGCCGTTTTCA+CGG | - | chr8.3:61051414-61051433 | MS.gene37562:intron | 50.0% |
| ACGGCCGCGACAAAAAGGTA+TGG | + | chr8.3:61051409-61051428 | None:intergenic | 55.0% | |
| CCAAACCAACCCGCTCTTCA+TGG | + | chr8.3:61051972-61051991 | None:intergenic | 55.0% | |
| CCAAACCATGAAGAGCGGGT+TGG | - | chr8.3:61051964-61051983 | MS.gene37562:CDS | 55.0% | |
| CCAACCCGCTCTTCATGGTT+TGG | + | chr8.3:61051967-61051986 | None:intergenic | 55.0% | |
| CCTTGTACGGCTTAGGCACA+CGG | + | chr8.3:61049828-61049847 | None:intergenic | 55.0% | |
| GAGGCTGAGGCTCTTGGTTT+AGG | - | chr8.3:61049778-61049797 | MS.gene37562:intron | 55.0% | |
| GCCGTGACGAAACCCTGTTA+TGG | + | chr8.3:61051311-61051330 | None:intergenic | 55.0% | |
| TGCGCCGCTGTTTGACAATG+TGG | - | chr8.3:61051674-61051693 | MS.gene37562:intron | 55.0% | |
| ! | GTAAGGATCCGGTTCGTGAG+TGG | - | chr8.3:61049517-61049536 | MS.gene37562:CDS | 55.0% |
| ! | TAGGTTGGATCGCTACCGTC+TGG | - | chr8.3:61050125-61050144 | MS.gene37562:intron | 55.0% |
| !! | CCATGAAGAGCGGGTTGGTT+TGG | - | chr8.3:61051969-61051988 | MS.gene37562:CDS | 55.0% |
| !! | TCTTGGTGTGCTGGCTTTGG+AGG | - | chr8.3:61052198-61052217 | MS.gene37562:intron | 55.0% |
| CCGTGTGCCTAAGCCGTACA+AGG | - | chr8.3:61049825-61049844 | MS.gene37562:intron | 60.0% | |
| CTTAGGCACACGGATGGTCC+CGG | + | chr8.3:61049818-61049837 | None:intergenic | 60.0% | |
| GGTCGAATGCCAGCTGCAAC+TGG | + | chr8.3:61050527-61050546 | None:intergenic | 60.0% | |
| GTACGGCTTAGGCACACGGA+TGG | + | chr8.3:61049824-61049843 | None:intergenic | 60.0% | |
| GTTGGATCGCTACCGTCTGG+TGG | - | chr8.3:61050128-61050147 | MS.gene37562:intron | 60.0% | |
| !! | GCGGCCGTTTTCACGGTAAC+AGG | - | chr8.3:61051421-61051440 | MS.gene37562:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 61049513 | 61052617 | 61049513 | ID=MS.gene37562 |
| chr8.3 | mRNA | 61049513 | 61052617 | 61049513 | ID=MS.gene37562.t1;Parent=MS.gene37562 |
| chr8.3 | exon | 61052472 | 61052617 | 61052472 | ID=MS.gene37562.t1.exon1;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61052472 | 61052617 | 61052472 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61052284 | 61052374 | 61052284 | ID=MS.gene37562.t1.exon2;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61052284 | 61052374 | 61052284 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61051931 | 61052002 | 61051931 | ID=MS.gene37562.t1.exon3;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61051931 | 61052002 | 61051931 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61051772 | 61051860 | 61051772 | ID=MS.gene37562.t1.exon4;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61051772 | 61051860 | 61051772 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61051554 | 61051672 | 61051554 | ID=MS.gene37562.t1.exon5;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61051554 | 61051672 | 61051554 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61050338 | 61050478 | 61050338 | ID=MS.gene37562.t1.exon6;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61050338 | 61050478 | 61050338 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61049885 | 61049961 | 61049885 | ID=MS.gene37562.t1.exon7;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61049885 | 61049961 | 61049885 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| chr8.3 | exon | 61049513 | 61049659 | 61049513 | ID=MS.gene37562.t1.exon8;Parent=MS.gene37562.t1 |
| chr8.3 | CDS | 61049513 | 61049659 | 61049513 | ID=cds.MS.gene37562.t1;Parent=MS.gene37562.t1 |
| Gene Sequence |
| Protein sequence |
