Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41187.t1 | XP_013456099.1 | 97.3 | 447 | 9 | 2 | 1 | 447 | 1 | 444 | 2.20E-237 | 831.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41187.t1 | Q9FY06 | 91.0 | 376 | 29 | 2 | 1 | 376 | 1 | 371 | 1.1e-192 | 674.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41187.t1 | A0A072UW90 | 97.3 | 447 | 9 | 2 | 1 | 447 | 1 | 444 | 1.6e-237 | 831.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene41187 | 0.83753 | 4.92E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene41187 | 0.811817 | 5.79E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene41187 | 0.815474 | 9.08E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene41187 | 0.853283 | 2.65E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene41187 | 0.851105 | 1.10E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene41187 | 0.84171 | 4.03E-58 | -1.69E-46 |
| MS.gene04939 | MS.gene41187 | 0.836792 | 7.60E-57 | -1.69E-46 |
| MS.gene049427 | MS.gene41187 | 0.833327 | 5.68E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene41187 | 0.821029 | 5.02E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene41187 | 0.892549 | 1.43E-74 | -1.69E-46 |
| MS.gene049805 | MS.gene41187 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene41187 | 0.866412 | 2.91E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene41187 | 0.864621 | 1.07E-64 | -1.69E-46 |
| MS.gene050170 | MS.gene41187 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene41187 | 0.82033 | 7.26E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene41187 | 0.823758 | 1.17E-53 | -1.69E-46 |
| MS.gene050338 | MS.gene41187 | -0.819994 | 8.67E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene41187 | 0.836182 | 1.09E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene41187 | 0.844676 | 6.52E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene41187 | 0.834897 | 2.30E-56 | -1.69E-46 |
| MS.gene050538 | MS.gene41187 | 0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene41187 | 0.851746 | 7.26E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene41187 | 0.866786 | 2.21E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene41187 | 0.832343 | 9.98E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene41187 | 0.848822 | 4.80E-60 | -1.69E-46 |
| MS.gene050747 | MS.gene41187 | 0.840448 | 8.64E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene41187 | 0.82962 | 4.65E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene41187 | 0.850926 | 1.24E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene41187 | 0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene41187 | 0.819903 | 9.10E-53 | -1.69E-46 |
| MS.gene050876 | MS.gene41187 | 0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene41187 | 0.818184 | 2.24E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene41187 | 0.851487 | 8.59E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene41187 | 0.840982 | 6.26E-58 | -1.69E-46 |
| MS.gene05100 | MS.gene41187 | 0.812511 | 4.09E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene41187 | 0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene41187 | 0.855733 | 5.17E-62 | -1.69E-46 |
| MS.gene051617 | MS.gene41187 | 0.84085 | 6.78E-58 | -1.69E-46 |
| MS.gene051651 | MS.gene41187 | -0.8008 | 1.22E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene41187 | 0.811163 | 8.03E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene41187 | 0.866603 | 2.53E-65 | -1.69E-46 |
| MS.gene051838 | MS.gene41187 | 0.843443 | 1.40E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene41187 | 0.806182 | 9.31E-50 | -1.69E-46 |
| MS.gene052129 | MS.gene41187 | -0.818339 | 2.06E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene41187 | 0.850694 | 1.44E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene41187 | 0.811987 | 5.32E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene41187 | 0.806063 | 9.86E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene41187 | 0.866369 | 3.00E-65 | -1.69E-46 |
| MS.gene052870 | MS.gene41187 | 0.831289 | 1.82E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene41187 | 0.850827 | 1.32E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene41187 | 0.802682 | 5.00E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene41187 | 0.810589 | 1.07E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene41187 | 0.84585 | 3.14E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene41187 | 0.824755 | 6.80E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene41187 | 0.831422 | 1.68E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene41187 | 0.830691 | 2.55E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene41187 | 0.813532 | 2.44E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene41187 | 0.810259 | 1.26E-50 | -1.69E-46 |
| MS.gene053579 | MS.gene41187 | 0.812194 | 4.79E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene41187 | 0.843132 | 1.69E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene41187 | 0.822518 | 2.27E-53 | -1.69E-46 |
| MS.gene053912 | MS.gene41187 | 0.804953 | 1.69E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene41187 | 0.84157 | 4.39E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene41187 | 0.8348 | 2.43E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene41187 | 0.848887 | 4.60E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene41187 | 0.870864 | 1.06E-66 | -1.69E-46 |
| MS.gene054884 | MS.gene41187 | -0.838684 | 2.48E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene41187 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene41187 | 0.809359 | 1.97E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene41187 | 0.827147 | 1.84E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene41187 | 0.817481 | 3.23E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene41187 | 0.848962 | 4.39E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene41187 | 0.846287 | 2.39E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene41187 | 0.81437 | 1.59E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene41187 | 0.862195 | 6.02E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene41187 | 0.832148 | 1.11E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene41187 | 0.859567 | 3.78E-63 | -1.69E-46 |
| MS.gene055776 | MS.gene41187 | 0.806655 | 7.40E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene41187 | 0.870284 | 1.64E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene41187 | 0.812332 | 4.47E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene41187 | 0.80627 | 8.92E-50 | -1.69E-46 |
| MS.gene056283 | MS.gene41187 | 0.852232 | 5.28E-61 | -1.69E-46 |
| MS.gene056387 | MS.gene41187 | 0.800015 | 1.76E-48 | -1.69E-46 |
| MS.gene056487 | MS.gene41187 | 0.803635 | 3.17E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene41187 | 0.842319 | 2.78E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene41187 | 0.843363 | 1.47E-58 | -1.69E-46 |
| MS.gene056549 | MS.gene41187 | 0.808244 | 3.41E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene41187 | 0.808034 | 3.78E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene41187 | 0.854005 | 1.64E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene41187 | 0.821196 | 4.59E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene41187 | -0.811222 | 7.80E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene41187 | 0.835966 | 1.23E-56 | -1.69E-46 |
| MS.gene056903 | MS.gene41187 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene41187 | 0.828643 | 8.02E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene41187 | 0.805309 | 1.42E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene41187 | 0.825948 | 3.55E-54 | -1.69E-46 |
| MS.gene057332 | MS.gene41187 | 0.800122 | 1.67E-48 | -1.69E-46 |
| MS.gene057658 | MS.gene41187 | 0.825177 | 5.40E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene41187 | 0.831774 | 1.38E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene41187 | 0.810152 | 1.33E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene41187 | -0.826543 | 2.56E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene41187 | 0.848183 | 7.21E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene41187 | 0.843185 | 1.64E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene41187 | 0.837264 | 5.76E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene41187 | 0.817585 | 3.05E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene41187 | 0.862749 | 4.06E-64 | -1.69E-46 |
| MS.gene05883 | MS.gene41187 | 0.805529 | 1.28E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene41187 | 0.833521 | 5.08E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene41187 | 0.850819 | 1.33E-60 | -1.69E-46 |
| MS.gene059079 | MS.gene41187 | 0.839332 | 1.69E-57 | -1.69E-46 |
| MS.gene059102 | MS.gene41187 | -0.804756 | 1.85E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene41187 | 0.840915 | 6.52E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene41187 | 0.808986 | 2.36E-50 | -1.69E-46 |
| MS.gene059526 | MS.gene41187 | -0.821687 | 3.54E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene41187 | 0.861266 | 1.16E-63 | -1.69E-46 |
| MS.gene059699 | MS.gene41187 | -0.801435 | 9.02E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene41187 | 0.856968 | 2.25E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene41187 | 0.821011 | 5.06E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene41187 | 0.853653 | 2.07E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene41187 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene41187 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene41187 | 0.884824 | 1.38E-71 | -1.69E-46 |
| MS.gene06077 | MS.gene41187 | 0.821648 | 3.61E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene41187 | 0.801264 | 9.77E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene41187 | 0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene41187 | 0.865632 | 5.13E-65 | -1.69E-46 |
| MS.gene06111 | MS.gene41187 | 0.811544 | 6.64E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene41187 | 0.853335 | 2.56E-61 | -1.69E-46 |
| MS.gene061231 | MS.gene41187 | 0.803585 | 3.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41187.t1 | MTR_4g063705 | 97.315 | 447 | 9 | 2 | 1 | 447 | 1 | 444 | 0.0 | 882 |
| MS.gene41187.t1 | MTR_3g086250 | 51.914 | 418 | 162 | 4 | 1 | 383 | 1 | 414 | 6.23e-139 | 409 |
| MS.gene41187.t1 | MTR_4g089105 | 26.316 | 285 | 161 | 11 | 74 | 342 | 91 | 342 | 3.31e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41187.t1 | AT2G28800 | 78.342 | 374 | 74 | 3 | 24 | 393 | 40 | 410 | 0.0 | 606 |
| MS.gene41187.t1 | AT2G28800 | 70.588 | 374 | 73 | 4 | 24 | 393 | 40 | 380 | 0.0 | 529 |
| MS.gene41187.t1 | AT2G28800 | 80.984 | 305 | 51 | 3 | 24 | 324 | 40 | 341 | 1.25e-180 | 508 |
| MS.gene41187.t1 | AT2G28800 | 80.984 | 305 | 51 | 3 | 24 | 324 | 40 | 341 | 1.65e-180 | 508 |
| MS.gene41187.t1 | AT1G24490 | 57.180 | 383 | 132 | 3 | 60 | 415 | 61 | 438 | 1.02e-146 | 427 |
| MS.gene41187.t1 | AT1G24490 | 49.086 | 383 | 126 | 4 | 60 | 415 | 61 | 401 | 7.32e-115 | 345 |
Find 122 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTTACTCAGATATTAA+AGG | 0.240430 | 4.1:+36866326 | MS.gene41187:intron |
| CAAATATGGTTGCGCAAATT+AGG | 0.245631 | 4.1:+36869647 | MS.gene41187:CDS |
| AGGATTGAATTGGTGGAATT+TGG | 0.254625 | 4.1:-36865394 | None:intergenic |
| CATCAGGACTAACAATTTAC+TGG | 0.275942 | 4.1:+36869155 | MS.gene41187:CDS |
| GCAGGATGGCCATCCACCTT+TGG | 0.301935 | 4.1:+36868883 | MS.gene41187:intron |
| TCGGCTTCTGTTTCCGATGA+TGG | 0.311599 | 4.1:+36869922 | MS.gene41187:CDS |
| TGCCATGGAGTTTGTTCTTA+AGG | 0.317066 | 4.1:+36865577 | MS.gene41187:CDS |
| TGTTAACAGAAGGTTTCTTA+TGG | 0.318050 | 4.1:+36867246 | MS.gene41187:CDS |
| AAACCTTCAACCTAAAATTA+AGG | 0.326230 | 4.1:+36866681 | MS.gene41187:CDS |
| CAGGATGGCCATCCACCTTT+GGG | 0.344722 | 4.1:+36868884 | MS.gene41187:intron |
| ATAGCAAATCCATACGAATA+AGG | 0.348748 | 4.1:-36866372 | None:intergenic |
| ACTCATTCTATTGATGTTAC+CGG | 0.363596 | 4.1:+36865419 | MS.gene41187:CDS |
| TTGAACCTCTTGGGGAACTT+TGG | 0.369203 | 4.1:-36870538 | None:intergenic |
| ATTGCTCACTCTTATTGTTA+AGG | 0.371624 | 4.1:+36866398 | MS.gene41187:CDS |
| TATATAGTCTGGTACGGTTA+GGG | 0.385089 | 4.1:-36865349 | None:intergenic |
| GTATATAGTCTGGTACGGTT+AGG | 0.386944 | 4.1:-36865350 | None:intergenic |
| TGAGAAAGAATAAGAAGAAC+AGG | 0.394821 | 4.1:-36868938 | None:intergenic |
| AGAAAGATATGCCGGTAATC+AGG | 0.396770 | 4.1:+36866711 | MS.gene41187:CDS |
| TGAGCACAGCTCAACAAATA+TGG | 0.403268 | 4.1:+36869633 | MS.gene41187:CDS |
| CAGAAGAACGGAGGTTGGTT+TGG | 0.403635 | 4.1:+36865542 | MS.gene41187:CDS |
| AACACCCCTCACCTGATTAC+CGG | 0.406242 | 4.1:-36866722 | None:intergenic |
| GAATGAGTTAAGGATTGAAT+TGG | 0.407264 | 4.1:-36865404 | None:intergenic |
| GAATACAACTTGAGACTTCA+AGG | 0.408158 | 4.1:+36866862 | MS.gene41187:CDS |
| GCTCGCCGATGCCGCCGTTA+CGG | 0.412973 | 4.1:+36865475 | MS.gene41187:CDS |
| ACCGGCATATCTTTCTTGAA+TGG | 0.419989 | 4.1:-36866704 | None:intergenic |
| AAAGTGGATCCGGAATTTCT+TGG | 0.421708 | 4.1:+36867309 | MS.gene41187:CDS |
| TCTTTCTCAATATGTTTCAA+TGG | 0.427391 | 4.1:+36868952 | MS.gene41187:CDS |
| TTCTGTTTCCGATGATGGCT+CGG | 0.429591 | 4.1:+36869927 | MS.gene41187:CDS |
| GCTACTATTCCCGTCTGGAT+TGG | 0.430547 | 4.1:+36867088 | MS.gene41187:CDS |
| ACTTCCTTTGACAAAGCAAC+AGG | 0.431867 | 4.1:+36866428 | MS.gene41187:CDS |
| CGCAGATGAAGTTCAACCTC+TGG | 0.433019 | 4.1:+36869897 | MS.gene41187:CDS |
| AAAGGATAACTTACCACAAA+TGG | 0.435903 | 4.1:-36867338 | None:intergenic |
| TATAGGTTGTTTACCGACTT+TGG | 0.435935 | 4.1:+36867066 | MS.gene41187:intron |
| TGAAGTTCAACCTCTGGCTT+CGG | 0.455794 | 4.1:+36869903 | MS.gene41187:CDS |
| TCAAGGCTATATACCCAAGC+TGG | 0.459348 | 4.1:+36866879 | MS.gene41187:CDS |
| TTTGGATGCATACGCCTCTT+CGG | 0.461858 | 4.1:-36870520 | None:intergenic |
| GTGAACTTTGGTATATAGTC+TGG | 0.466563 | 4.1:-36865360 | None:intergenic |
| ATCGGCCGTAACGGCGGCAT+CGG | 0.468950 | 4.1:-36865480 | None:intergenic |
| AACATCAATAGAATGAGTTA+AGG | 0.469067 | 4.1:-36865414 | None:intergenic |
| TTCTTATGGATCCCTTCTCT+CGG | 0.470607 | 4.1:+36867260 | MS.gene41187:CDS |
| CTTTGGCTACTATTCCCGTC+TGG | 0.472299 | 4.1:+36867083 | MS.gene41187:CDS |
| ATATTTGTTGAGCTGTGCTC+AGG | 0.473781 | 4.1:-36869631 | None:intergenic |
| CACAGCAACATCCGTGGAAG+TGG | 0.479567 | 4.1:-36865519 | None:intergenic |
| TTTATCTAATGTGGCAAATG+AGG | 0.481648 | 4.1:+36867123 | MS.gene41187:CDS |
| AGATGCTGGTGGAATTATTA+CGG | 0.484611 | 4.1:+36869694 | MS.gene41187:CDS |
| AAGTTGTTGCGGTGAAGTGA+AGG | 0.492325 | 4.1:-36865323 | None:intergenic |
| CAATGGGTTAACCCCAGCTT+GGG | 0.493653 | 4.1:-36866892 | None:intergenic |
| GTGGTCCGTTATCATACAAC+AGG | 0.494705 | 4.1:-36870603 | None:intergenic |
| TGAGTTAAGGATTGAATTGG+TGG | 0.495040 | 4.1:-36865401 | None:intergenic |
| TTCTCACTATCTGTGCCATC+AGG | 0.496768 | 4.1:+36869139 | MS.gene41187:CDS |
| CACTTCCACTTCCACTTCCA+CGG | 0.497958 | 4.1:+36865508 | MS.gene41187:CDS |
| TTGCCACATTAGATAAAGCT+TGG | 0.504430 | 4.1:-36867117 | None:intergenic |
| ATGGCCATCCACCTTTGGGT+TGG | 0.506568 | 4.1:+36868888 | MS.gene41187:CDS |
| ATTTCATCTCCATCGTTCCT+CGG | 0.507658 | 4.1:+36865290 | MS.gene41187:CDS |
| AACATCCGTGGAAGTGGAAG+TGG | 0.509079 | 4.1:-36865513 | None:intergenic |
| ATTGAATTGGTGGAATTTGG+TGG | 0.511544 | 4.1:-36865391 | None:intergenic |
| ATAAAGCAGTCCTTCAGCTC+TGG | 0.514606 | 4.1:-36865450 | None:intergenic |
| GCTGCTAGACAAAGTGGATC+CGG | 0.517710 | 4.1:+36867299 | MS.gene41187:CDS |
| CAGTAAATTGTTAGTCCTGA+TGG | 0.520024 | 4.1:-36869154 | None:intergenic |
| CTAACCTGTTGCTTTGTCAA+AGG | 0.522023 | 4.1:-36866432 | None:intergenic |
| AAATGATCTCTTAGCTCGTC+CGG | 0.523022 | 4.1:-36869717 | None:intergenic |
| AAGTTTCTTCCACTCATGAT+CGG | 0.524406 | 4.1:+36869112 | MS.gene41187:CDS |
| GTGGAAACTGAAGTGAACTT+TGG | 0.525784 | 4.1:-36865372 | None:intergenic |
| GCCATTCAAGAAAGATATGC+CGG | 0.528006 | 4.1:+36866703 | MS.gene41187:CDS |
| GTGCATGTGCCTTATTCGTA+TGG | 0.532237 | 4.1:+36866363 | MS.gene41187:CDS |
| TTGCGGTGAAGTGAAGGAAG+TGG | 0.533549 | 4.1:-36865317 | None:intergenic |
| GATATAAGTGTACCTGCCAA+TGG | 0.537731 | 4.1:-36866909 | None:intergenic |
| CCAAGCTGGGGTTAACCCAT+TGG | 0.540862 | 4.1:+36866893 | MS.gene41187:CDS |
| CCAGCATCTTCATTAACAGC+AGG | 0.540975 | 4.1:-36869680 | None:intergenic |
| CCAATGGGTTAACCCCAGCT+TGG | 0.541467 | 4.1:-36866893 | None:intergenic |
| AGAGGTTGAACTTCATCTGC+GGG | 0.544085 | 4.1:-36869895 | None:intergenic |
| ATATAAGTGTACCTGCCAAT+GGG | 0.553064 | 4.1:-36866908 | None:intergenic |
| GGTGTCTTCGCCAGAGCTGA+AGG | 0.553352 | 4.1:+36865440 | MS.gene41187:CDS |
| TTGAAGGGACTGTTAACAGA+AGG | 0.553996 | 4.1:+36867236 | MS.gene41187:intron |
| AGCATTGCTGCTAGACAAAG+TGG | 0.554199 | 4.1:+36867293 | MS.gene41187:CDS |
| GTACCAAGCTTTATCTAATG+TGG | 0.555358 | 4.1:+36867114 | MS.gene41187:CDS |
| CTTTGGTATATAGTCTGGTA+CGG | 0.556415 | 4.1:-36865355 | None:intergenic |
| CAAGGCTATATACCCAAGCT+GGG | 0.556897 | 4.1:+36866880 | MS.gene41187:CDS |
| CTAGTGGGACCACCGAGAGA+AGG | 0.560903 | 4.1:-36867272 | None:intergenic |
| GAGAAGTAGCCGATCATGAG+TGG | 0.561223 | 4.1:-36869121 | None:intergenic |
| GCTGGGGTTAACCCATTGGC+AGG | 0.563009 | 4.1:+36866897 | MS.gene41187:CDS |
| CTGTGCAGAAGAACGGAGGT+TGG | 0.565225 | 4.1:+36865537 | MS.gene41187:CDS |
| TAGTGGGACCACCGAGAGAA+GGG | 0.572027 | 4.1:-36867271 | None:intergenic |
| GTTTACGCAGTTAAAAGAAG+AGG | 0.578308 | 4.1:+36869843 | MS.gene41187:CDS |
| AGTGACTGCATCGGCCGTAA+CGG | 0.580459 | 4.1:-36865489 | None:intergenic |
| CCTGCTGTTAATGAAGATGC+TGG | 0.581288 | 4.1:+36869680 | MS.gene41187:CDS |
| GTTACTCAGATATTAAAGGA+TGG | 0.583255 | 4.1:+36866330 | MS.gene41187:intron |
| TTATGGATCCCTTCTCTCGG+TGG | 0.585688 | 4.1:+36867263 | MS.gene41187:CDS |
| GATGTTGCTGTGCAGAAGAA+CGG | 0.586401 | 4.1:+36865530 | MS.gene41187:CDS |
| CCTGACATGCTTACCTGAGG+TGG | 0.590658 | 4.1:-36868986 | None:intergenic |
| GGAAATCATGAAACCACCTC+AGG | 0.590966 | 4.1:+36868973 | MS.gene41187:CDS |
| AAGAACAAACTCCATGGCAT+CGG | 0.591393 | 4.1:-36865573 | None:intergenic |
| CATGCCAACCCAAAGGTGGA+TGG | 0.591741 | 4.1:-36868892 | None:intergenic |
| TTCAGCTCTGGCGAAGACAC+CGG | 0.593369 | 4.1:-36865438 | None:intergenic |
| TGTCTAGCAGCAATGCTAGT+GGG | 0.599990 | 4.1:-36867287 | None:intergenic |
| GCTGGTGGAATTATTACGGC+CGG | 0.602330 | 4.1:+36869698 | MS.gene41187:CDS |
| AGTGGAGTTCCGAGGAACGA+TGG | 0.603205 | 4.1:-36865299 | None:intergenic |
| GACTGCATCGGCCGTAACGG+CGG | 0.605216 | 4.1:-36865486 | None:intergenic |
| ATATGGTTGCGCAAATTAGG+AGG | 0.606383 | 4.1:+36869650 | MS.gene41187:CDS |
| TGAAATCAGTGTCTTCGCCA+TGG | 0.606830 | 4.1:-36865273 | None:intergenic |
| TTGTCTAGCAGCAATGCTAG+TGG | 0.618690 | 4.1:-36867288 | None:intergenic |
| TACCTTAAGAACAAACTCCA+TGG | 0.619240 | 4.1:-36865579 | None:intergenic |
| AGCCCGAAAAGGATGGTGAA+AGG | 0.621319 | 4.1:+36869744 | MS.gene41187:CDS |
| GGAAGTGGAAGTGACTGCAT+CGG | 0.629612 | 4.1:-36865498 | None:intergenic |
| CAGAGGTTGAACTTCATCTG+CGG | 0.640709 | 4.1:-36869896 | None:intergenic |
| GTGAAGGAAGTGGAGTTCCG+AGG | 0.644425 | 4.1:-36865307 | None:intergenic |
| GCTGTTAATGAAGATGCTGG+TGG | 0.645878 | 4.1:+36869683 | MS.gene41187:CDS |
| TGCATCCAAAGTTCCCCAAG+AGG | 0.646535 | 4.1:+36870533 | MS.gene41187:CDS |
| TGGTACAGACCAATCCAGAC+GGG | 0.646904 | 4.1:-36867097 | None:intergenic |
| ATATAGTCTGGTACGGTTAG+GGG | 0.652620 | 4.1:-36865348 | None:intergenic |
| GTGTCATGCCAACCCAAAGG+TGG | 0.654970 | 4.1:-36868896 | None:intergenic |
| CTTTGTCAAAGGAAGTGTAG+CGG | 0.665172 | 4.1:-36866421 | None:intergenic |
| TTGGTACAGACCAATCCAGA+CGG | 0.665545 | 4.1:-36867098 | None:intergenic |
| CTTCTGCACAGCAACATCCG+TGG | 0.668398 | 4.1:-36865525 | None:intergenic |
| GAAACAGAAGCCGAAGCCAG+AGG | 0.676371 | 4.1:-36869913 | None:intergenic |
| ACGGGAATAGTAGCCAAAGT+CGG | 0.680935 | 4.1:-36867079 | None:intergenic |
| GGTTAGGGGAGAAGTTGTTG+CGG | 0.683683 | 4.1:-36865334 | None:intergenic |
| GGAACAAGAAGTTACCGAAG+AGG | 0.686286 | 4.1:+36870506 | MS.gene41187:intron |
| ATACGAATAAGGCACATGCA+CGG | 0.688460 | 4.1:-36866361 | None:intergenic |
| GCAGTGTCATGCCAACCCAA+AGG | 0.709975 | 4.1:-36868899 | None:intergenic |
| AAGGCTATATACCCAAGCTG+GGG | 0.714930 | 4.1:+36866881 | MS.gene41187:CDS |
| GTTGCTGTGCAGAAGAACGG+AGG | 0.748792 | 4.1:+36865533 | MS.gene41187:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGTAAGTT+AGG | - | chr4.1:36869047-36869066 | None:intergenic | 10.0% |
| !! | AAACAATTTGTATAAAAAAA+AGG | - | chr4.1:36868206-36868225 | None:intergenic | 10.0% |
| !! | AACAATTTGTATAAAAAAAA+GGG | - | chr4.1:36868205-36868224 | None:intergenic | 10.0% |
| !! | TTCTATAAATAAATCAAATT+TGG | + | chr4.1:36869313-36869332 | MS.gene41187:intron | 10.0% |
| !! | TTTATTTATTTATATCAGTA+TGG | + | chr4.1:36868708-36868727 | MS.gene41187:intron | 10.0% |
| !!! | AAATAATTTTTTTGCATATT+TGG | + | chr4.1:36867372-36867391 | MS.gene41187:intron | 10.0% |
| !! | AAAATTGAAACTATTGTATA+AGG | + | chr4.1:36870125-36870144 | MS.gene41187:intron | 15.0% |
| !! | CAAAAAAAAAAAACCATAAA+TGG | + | chr4.1:36866556-36866575 | MS.gene41187:intron | 15.0% |
| !! | CTTAAATTACATTAAAATGA+CGG | - | chr4.1:36870425-36870444 | None:intergenic | 15.0% |
| !! | TTTATTTCATATACTTTCTT+TGG | - | chr4.1:36865688-36865707 | None:intergenic | 15.0% |
| !! | TTTCTCAAAAAAGTAAAAAT+AGG | - | chr4.1:36870394-36870413 | None:intergenic | 15.0% |
| !!! | AATTTTCTTCTACATTTTTT+TGG | + | chr4.1:36868662-36868681 | MS.gene41187:intron | 15.0% |
| !!! | ACAATAGTTTCAATTTTTAA+GGG | - | chr4.1:36870122-36870141 | None:intergenic | 15.0% |
| !!! | ATTGAAAACTTTTAATTTGA+AGG | + | chr4.1:36867220-36867239 | MS.gene41187:intron | 15.0% |
| !!! | ATTTTAATGTAATTTAAGGT+TGG | + | chr4.1:36870427-36870446 | MS.gene41187:intron | 15.0% |
| !!! | CATTTATGGTTTTTTTTTTT+TGG | - | chr4.1:36866558-36866577 | None:intergenic | 15.0% |
| !!! | GAAATTTGTATTTTCTTATA+TGG | - | chr4.1:36870223-36870242 | None:intergenic | 15.0% |
| !!! | TACAATAGTTTCAATTTTTA+AGG | - | chr4.1:36870123-36870142 | None:intergenic | 15.0% |
| !!! | TGTGTTTTTTTTTTGTTATA+TGG | + | chr4.1:36866100-36866119 | MS.gene41187:intron | 15.0% |
| !!! | TTAGTTTCTTTATAGTTTTA+AGG | + | chr4.1:36868485-36868504 | MS.gene41187:intron | 15.0% |
| !!! | TTGAAAACTTTTAATTTGAA+GGG | + | chr4.1:36867221-36867240 | MS.gene41187:intron | 15.0% |
| !! | AACAAAATCCTTATATAGTA+AGG | - | chr4.1:36865844-36865863 | None:intergenic | 20.0% |
| !! | AATCTTGTATAAAGATGAAA+TGG | + | chr4.1:36870182-36870201 | MS.gene41187:intron | 20.0% |
| !! | AGATAGAAAGAAGTAATTAA+AGG | + | chr4.1:36870029-36870048 | MS.gene41187:intron | 20.0% |
| !! | ATTTCATCTTTATACAAGAT+TGG | - | chr4.1:36870183-36870202 | None:intergenic | 20.0% |
| !! | CATTAAAAACAAACCATAAA+TGG | + | chr4.1:36866523-36866542 | MS.gene41187:intron | 20.0% |
| !! | TAAAATAATAAGGAAAGAGA+AGG | - | chr4.1:36869015-36869034 | None:intergenic | 20.0% |
| !! | TATAAAGAAACTAATTGATG+TGG | - | chr4.1:36868479-36868498 | None:intergenic | 20.0% |
| !! | TATTTCACAAACTATATCAA+TGG | + | chr4.1:36869182-36869201 | MS.gene41187:intron | 20.0% |
| !! | TCATGAAATTTGTATTATTG+AGG | + | chr4.1:36865874-36865893 | MS.gene41187:intron | 20.0% |
| !! | TGGAAATGTATACATATAAA+TGG | + | chr4.1:36866120-36866139 | MS.gene41187:intron | 20.0% |
| !!! | AAAACATAATTTTGTTTTCC+CGG | - | chr4.1:36868579-36868598 | None:intergenic | 20.0% |
| !!! | AAAGAAAAAGGTGTATTATA+TGG | - | chr4.1:36869361-36869380 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTTATGTGATCTT+TGG | + | chr4.1:36865759-36865778 | MS.gene41187:intron | 20.0% |
| !!! | CGTCATTTTAATGTAATTTA+AGG | + | chr4.1:36870423-36870442 | MS.gene41187:intron | 20.0% |
| !!! | GCAATTTTATCATTTTGTAT+AGG | + | chr4.1:36867049-36867068 | MS.gene41187:intron | 20.0% |
| !!! | TAGTTTTGTTTTCCTTTTTA+TGG | - | chr4.1:36866238-36866257 | None:intergenic | 20.0% |
| !!! | TGACTTTATTTAATACATGT+AGG | + | chr4.1:36866636-36866655 | MS.gene41187:intron | 20.0% |
| ! | AAAAAGAAAGTGAGAAAAGA+GGG | - | chr4.1:36868633-36868652 | None:intergenic | 25.0% |
| ! | AAAAAGCAAAATGCTTTACT+AGG | - | chr4.1:36868443-36868462 | None:intergenic | 25.0% |
| ! | AAAAGCAAAATGCTTTACTA+GGG | - | chr4.1:36868442-36868461 | None:intergenic | 25.0% |
| ! | AAAATAAGCTGAAAACAGTT+TGG | + | chr4.1:36865725-36865744 | MS.gene41187:intron | 25.0% |
| ! | AAACATGACCTTACTATATA+AGG | + | chr4.1:36865833-36865852 | MS.gene41187:intron | 25.0% |
| ! | AAACCTTCAACCTAAAATTA+AGG | + | chr4.1:36866681-36866700 | MS.gene41187:CDS | 25.0% |
| ! | AAATAAGCTGAAAACAGTTT+GGG | + | chr4.1:36865726-36865745 | MS.gene41187:intron | 25.0% |
| ! | AACATCAATAGAATGAGTTA+AGG | - | chr4.1:36865417-36865436 | None:intergenic | 25.0% |
| ! | AACATTTGCAATATCATAAC+TGG | + | chr4.1:36867010-36867029 | MS.gene41187:intron | 25.0% |
| ! | AATTTGCCATAAGTATATGA+TGG | - | chr4.1:36869811-36869830 | None:intergenic | 25.0% |
| ! | ACATTTGCAATATCATAACT+GGG | + | chr4.1:36867011-36867030 | MS.gene41187:intron | 25.0% |
| ! | ACTTTAGTATTTCTTCTCTT+TGG | + | chr4.1:36868603-36868622 | MS.gene41187:intron | 25.0% |
| ! | AGTTGAGAAGAAAATGATAA+AGG | - | chr4.1:36866944-36866963 | None:intergenic | 25.0% |
| ! | ATCATATACTTATGGCAAAT+TGG | + | chr4.1:36869810-36869829 | MS.gene41187:intron | 25.0% |
| ! | ATTGTATACAATTTGTGACT+AGG | - | chr4.1:36869994-36870013 | None:intergenic | 25.0% |
| ! | CAAATTACAGCAATTTCTAT+AGG | + | chr4.1:36866457-36866476 | MS.gene41187:intron | 25.0% |
| ! | CATGTAAAATAGCCATAAAA+AGG | + | chr4.1:36866223-36866242 | MS.gene41187:intron | 25.0% |
| ! | CTGAAAGAAAAATCCATTTA+TGG | - | chr4.1:36866572-36866591 | None:intergenic | 25.0% |
| ! | GTCTGCTTTGTAAAATAATA+AGG | - | chr4.1:36869025-36869044 | None:intergenic | 25.0% |
| ! | TAAAAAGAAAGTGAGAAAAG+AGG | - | chr4.1:36868634-36868653 | None:intergenic | 25.0% |
| ! | TAAGAAAATACAAATTTCCC+AGG | + | chr4.1:36870225-36870244 | MS.gene41187:intron | 25.0% |
| ! | TACAAATTTCATGAATCTCA+AGG | - | chr4.1:36865868-36865887 | None:intergenic | 25.0% |
| ! | TATACAAGATTGGAAATAGA+TGG | - | chr4.1:36870173-36870192 | None:intergenic | 25.0% |
| ! | TATGCACAACTTATAAAAAG+TGG | - | chr4.1:36867619-36867638 | None:intergenic | 25.0% |
| ! | TCTTTCTCAATATGTTTCAA+TGG | + | chr4.1:36868952-36868971 | MS.gene41187:CDS | 25.0% |
| ! | TGATTCTGTATAATAATGCT+TGG | + | chr4.1:36866965-36866984 | MS.gene41187:intron | 25.0% |
| ! | TGTTGTTACTCAGATATTAA+AGG | + | chr4.1:36866326-36866345 | MS.gene41187:intron | 25.0% |
| ! | TTATATAGTAAGGTCATGTT+TGG | - | chr4.1:36865834-36865853 | None:intergenic | 25.0% |
| ! | TTCAATCCATCATATACTTA+TGG | + | chr4.1:36869802-36869821 | MS.gene41187:intron | 25.0% |
| ! | TTCTATGCAATATGAAATCA+TGG | - | chr4.1:36870098-36870117 | None:intergenic | 25.0% |
| ! | TTTAAATGAGAACGATGTTA+AGG | + | chr4.1:36865986-36866005 | MS.gene41187:intron | 25.0% |
| !! | AAAGGTGTATTATATGGATA+CGG | - | chr4.1:36869355-36869374 | None:intergenic | 25.0% |
| !! | AAATGGTTTCTGAAAGAAAA+AGG | - | chr4.1:36869373-36869392 | None:intergenic | 25.0% |
| !! | ACTAAGGAATTTAGCATTTT+GGG | + | chr4.1:36867840-36867859 | MS.gene41187:intron | 25.0% |
| !! | AGTTAGGAATTTAGCATTTT+GGG | + | chr4.1:36867764-36867783 | MS.gene41187:intron | 25.0% |
| !! | GTGTTTATAAGAGTGTATTT+AGG | - | chr4.1:36868418-36868437 | None:intergenic | 25.0% |
| !! | TAGTTAGGAATTTAGCATTT+TGG | + | chr4.1:36867763-36867782 | MS.gene41187:intron | 25.0% |
| !! | TTTCATAAGCTTTTATGGAT+AGG | - | chr4.1:36868311-36868330 | None:intergenic | 25.0% |
| !! | TTTCTCACTTTCTTTTTACA+AGG | + | chr4.1:36868636-36868655 | MS.gene41187:intron | 25.0% |
| !!! | AAGAAGTAATTAAAGGTGTT+CGG | + | chr4.1:36870036-36870055 | MS.gene41187:intron | 25.0% |
| !!! | AAGCATTTTGCTTTTTACAA+TGG | + | chr4.1:36868447-36868466 | MS.gene41187:intron | 25.0% |
| !!! | AGATTTTTTTTCCTTTTGCT+AGG | + | chr4.1:36869594-36869613 | MS.gene41187:intron | 25.0% |
| !!! | ATACAAATTGTTTCTACCAA+GGG | + | chr4.1:36867987-36868006 | MS.gene41187:intron | 25.0% |
| !!! | ATGATAACTCTAAAGCAAAA+GGG | - | chr4.1:36866206-36866225 | None:intergenic | 25.0% |
| !!! | ATGGTTTTTTTTTTTTGGAC+TGG | - | chr4.1:36866553-36866572 | None:intergenic | 25.0% |
| !!! | CTTGTTTTCATAAGCTTTTA+TGG | - | chr4.1:36868316-36868335 | None:intergenic | 25.0% |
| !!! | TATACAAATTGTTTCTACCA+AGG | + | chr4.1:36867986-36868005 | MS.gene41187:intron | 25.0% |
| !!! | TCAGCTTATTTTCATAAGTT+CGG | - | chr4.1:36865717-36865736 | None:intergenic | 25.0% |
| !!! | TGTTTTTAATGTTTCAAACG+AGG | - | chr4.1:36866514-36866533 | None:intergenic | 25.0% |
| AAAGCAAAATGCTTTACTAG+GGG | - | chr4.1:36868441-36868460 | None:intergenic | 30.0% | |
| AAAGGATAACTTACCACAAA+TGG | - | chr4.1:36867341-36867360 | None:intergenic | 30.0% | |
| AATAGATGGTAGTTGGAATT+CGG | - | chr4.1:36870159-36870178 | None:intergenic | 30.0% | |
| ACGAGGTTATCATAATTTCA+TGG | - | chr4.1:36866497-36866516 | None:intergenic | 30.0% | |
| ACTCATTCTATTGATGTTAC+CGG | + | chr4.1:36865419-36865438 | MS.gene41187:CDS | 30.0% | |
| ACTTAGATACTTCTTTCTGA+AGG | + | chr4.1:36869451-36869470 | MS.gene41187:intron | 30.0% | |
| AGAAAAACTTTGAACCTCTT+GGG | - | chr4.1:36870550-36870569 | None:intergenic | 30.0% | |
| AGCCTCTTGTGTAAAAATAA+GGG | + | chr4.1:36868078-36868097 | MS.gene41187:intron | 30.0% | |
| ATACTTGTGTTTCACACATT+AGG | - | chr4.1:36869410-36869429 | None:intergenic | 30.0% | |
| ATAGCAAATCCATACGAATA+AGG | - | chr4.1:36866375-36866394 | None:intergenic | 30.0% | |
| ATCCTGAAATTATATGTTGC+AGG | + | chr4.1:36866014-36866033 | MS.gene41187:intron | 30.0% | |
| ATGCTAAACCAACTTTATAC+AGG | + | chr4.1:36870485-36870504 | MS.gene41187:intron | 30.0% | |
| ATTATTTCGCTTATGAGCAA+AGG | - | chr4.1:36867359-36867378 | None:intergenic | 30.0% | |
| ATTGCTCACTCTTATTGTTA+AGG | + | chr4.1:36866398-36866417 | MS.gene41187:CDS | 30.0% | |
| GAAGAAGAAAAAGTTAAGCA+AGG | + | chr4.1:36869867-36869886 | MS.gene41187:CDS | 30.0% | |
| GAATGAGTTAAGGATTGAAT+TGG | - | chr4.1:36865407-36865426 | None:intergenic | 30.0% | |
| GCTAAATTCCTAACTACTAA+AGG | - | chr4.1:36867759-36867778 | None:intergenic | 30.0% | |
| GTATTCTTTCCTTGAAATGA+GGG | - | chr4.1:36866848-36866867 | None:intergenic | 30.0% | |
| GTTACTCAGATATTAAAGGA+TGG | + | chr4.1:36866330-36866349 | MS.gene41187:intron | 30.0% | |
| TAAAGTACGTTCAAAACCAA+CGG | - | chr4.1:36865970-36865989 | None:intergenic | 30.0% | |
| TAAATTCCTTAGTCCCTATT+TGG | - | chr4.1:36867833-36867852 | None:intergenic | 30.0% | |
| TAGAAAAACTTTGAACCTCT+TGG | - | chr4.1:36870551-36870570 | None:intergenic | 30.0% | |
| TAGGAACTTAATAACTAGAG+AGG | - | chr4.1:36869211-36869230 | None:intergenic | 30.0% | |
| TATCTAAGTTCTTGAGCATA+TGG | - | chr4.1:36869440-36869459 | None:intergenic | 30.0% | |
| TCCTGAAATTATATGTTGCA+GGG | + | chr4.1:36866015-36866034 | MS.gene41187:intron | 30.0% | |
| TCTAAGAAAAAACTCAACGA+CGG | - | chr4.1:36865939-36865958 | None:intergenic | 30.0% | |
| TGAGAAAGAATAAGAAGAAC+AGG | - | chr4.1:36868941-36868960 | None:intergenic | 30.0% | |
| TGCTTGTGAAAATATATGCA+AGG | + | chr4.1:36867591-36867610 | MS.gene41187:intron | 30.0% | |
| TGTACCTTAAAATGATAGCA+TGG | + | chr4.1:36866797-36866816 | MS.gene41187:intron | 30.0% | |
| TGTATTCTTTCCTTGAAATG+AGG | - | chr4.1:36866849-36866868 | None:intergenic | 30.0% | |
| TGTTAACAGAAGGTTTCTTA+TGG | + | chr4.1:36867246-36867265 | MS.gene41187:CDS | 30.0% | |
| TTATTCGTAAACCTAGCAAA+AGG | - | chr4.1:36869608-36869627 | None:intergenic | 30.0% | |
| TTCTTGTTCCTGTATAAAGT+TGG | - | chr4.1:36870496-36870515 | None:intergenic | 30.0% | |
| TTTATCTAATGTGGCAAATG+AGG | + | chr4.1:36867123-36867142 | MS.gene41187:CDS | 30.0% | |
| ! | AAGAGGTTCAAAGTTTTTCT+AGG | + | chr4.1:36870550-36870569 | MS.gene41187:CDS | 30.0% |
| ! | ACAACCATGCTATCATTTTA+AGG | - | chr4.1:36866804-36866823 | None:intergenic | 30.0% |
| ! | ACTGAAATCTAAGACTAACT+GGG | - | chr4.1:36867653-36867672 | None:intergenic | 30.0% |
| ! | AGAGGTTCAAAGTTTTTCTA+GGG | + | chr4.1:36870551-36870570 | MS.gene41187:CDS | 30.0% |
| ! | AGGTCAGTATTTTATGATAC+AGG | + | chr4.1:36869764-36869783 | MS.gene41187:intron | 30.0% |
| ! | ATTGAGCTTTTCTTTTTGTC+CGG | - | chr4.1:36870071-36870090 | None:intergenic | 30.0% |
| ! | CAATCCTCCAATTTTATTAC+AGG | - | chr4.1:36866280-36866299 | None:intergenic | 30.0% |
| ! | CTAAGGAATTTAGCATTTTG+GGG | + | chr4.1:36867841-36867860 | MS.gene41187:intron | 30.0% |
| ! | CTCTTGACAATCATTTTCTT+TGG | + | chr4.1:36867460-36867479 | MS.gene41187:intron | 30.0% |
| ! | GACTAAGGAATTTAGCATTT+TGG | + | chr4.1:36867839-36867858 | MS.gene41187:intron | 30.0% |
| ! | GTAATGCTATTTGTTTCGAA+AGG | + | chr4.1:36866148-36866167 | MS.gene41187:intron | 30.0% |
| ! | GTATAAAGTTGGTTTAGCAT+GGG | - | chr4.1:36870485-36870504 | None:intergenic | 30.0% |
| ! | GTTAGGAATTTAGCATTTTG+GGG | + | chr4.1:36867765-36867784 | MS.gene41187:intron | 30.0% |
| ! | TAAGGAATTTAGCATTTTGG+GGG | + | chr4.1:36867842-36867861 | MS.gene41187:intron | 30.0% |
| ! | TACTGAAATCTAAGACTAAC+TGG | - | chr4.1:36867654-36867673 | None:intergenic | 30.0% |
| ! | TATAAAGTTGGTTTAGCATG+GGG | - | chr4.1:36870484-36870503 | None:intergenic | 30.0% |
| ! | TGTATAAAGTTGGTTTAGCA+TGG | - | chr4.1:36870486-36870505 | None:intergenic | 30.0% |
| ! | TTAGGAATTTAGCATTTTGG+GGG | + | chr4.1:36867766-36867785 | MS.gene41187:intron | 30.0% |
| ! | TTTATTGGTTGTGTTGTTGT+AGG | + | chr4.1:36868517-36868536 | MS.gene41187:intron | 30.0% |
| !! | AATTGTTTCTACCATCAAAG+AGG | + | chr4.1:36868218-36868237 | MS.gene41187:intron | 30.0% |
| !! | AGAAGTGTATTCTTTTGAGT+AGG | - | chr4.1:36869085-36869104 | None:intergenic | 30.0% |
| !! | CATGATAACTCTAAAGCAAA+AGG | - | chr4.1:36866207-36866226 | None:intergenic | 30.0% |
| !! | TCTTGAATGGCCTTAATTTT+AGG | - | chr4.1:36866694-36866713 | None:intergenic | 30.0% |
| !!! | CTTCTACATTTTTTTGGTTG+TGG | + | chr4.1:36868668-36868687 | MS.gene41187:intron | 30.0% |
| !!! | CTTTATAGTTTTAAGGAGCT+CGG | + | chr4.1:36868492-36868511 | MS.gene41187:intron | 30.0% |
| AACTCTCATTTCCTCTTTGA+TGG | - | chr4.1:36868232-36868251 | None:intergenic | 35.0% | |
| AAGCAAAATGCTTTACTAGG+GGG | - | chr4.1:36868440-36868459 | None:intergenic | 35.0% | |
| AAGTTTCTTCCACTCATGAT+CGG | + | chr4.1:36869112-36869131 | MS.gene41187:CDS | 35.0% | |
| AATTTCCCAGGAAATTCAAG+AGG | + | chr4.1:36870237-36870256 | MS.gene41187:intron | 35.0% | |
| ACGTCTGTTAATTGTTATGC+AGG | + | chr4.1:36868865-36868884 | MS.gene41187:intron | 35.0% | |
| AGATGCTGGTGGAATTATTA+CGG | + | chr4.1:36869694-36869713 | MS.gene41187:CDS | 35.0% | |
| AGGATTGAATTGGTGGAATT+TGG | - | chr4.1:36865397-36865416 | None:intergenic | 35.0% | |
| AGTAATGTAGCAATTTGCGT+AGG | + | chr4.1:36867565-36867584 | MS.gene41187:intron | 35.0% | |
| ATATAAGTGTACCTGCCAAT+GGG | - | chr4.1:36866911-36866930 | None:intergenic | 35.0% | |
| ATGCTCATTTAGTCCCTATT+TGG | - | chr4.1:36867909-36867928 | None:intergenic | 35.0% | |
| ATTGAATTGGTGGAATTTGG+TGG | - | chr4.1:36865394-36865413 | None:intergenic | 35.0% | |
| ATTGTTTCAAGAACCATGAC+TGG | - | chr4.1:36867495-36867514 | None:intergenic | 35.0% | |
| ATTTCATTGCCCTCATTTCA+AGG | + | chr4.1:36866836-36866855 | MS.gene41187:intron | 35.0% | |
| CAAATATGGTTGCGCAAATT+AGG | + | chr4.1:36869647-36869666 | MS.gene41187:CDS | 35.0% | |
| CAGCCTCTTGTGTAAAAATA+AGG | + | chr4.1:36868077-36868096 | MS.gene41187:intron | 35.0% | |
| CAGTAAATTGTTAGTCCTGA+TGG | - | chr4.1:36869157-36869176 | None:intergenic | 35.0% | |
| CATCAGGACTAACAATTTAC+TGG | + | chr4.1:36869155-36869174 | MS.gene41187:CDS | 35.0% | |
| CCACGTTCCTGTAATAAAAT+TGG | + | chr4.1:36866270-36866289 | MS.gene41187:intron | 35.0% | |
| CGTTCCTGTAATAAAATTGG+AGG | + | chr4.1:36866273-36866292 | MS.gene41187:intron | 35.0% | |
| CTGTTAATTGTTATGCAGGA+TGG | + | chr4.1:36868869-36868888 | MS.gene41187:intron | 35.0% | |
| CTTTGGTATATAGTCTGGTA+CGG | - | chr4.1:36865358-36865377 | None:intergenic | 35.0% | |
| GAAAAACTTTGAACCTCTTG+GGG | - | chr4.1:36870549-36870568 | None:intergenic | 35.0% | |
| GAATACAACTTGAGACTTCA+AGG | + | chr4.1:36866862-36866881 | MS.gene41187:CDS | 35.0% | |
| GATTGGAAATAGATGGTAGT+TGG | - | chr4.1:36870166-36870185 | None:intergenic | 35.0% | |
| GCCTCTTGTGTAAAAATAAG+GGG | + | chr4.1:36868079-36868098 | MS.gene41187:intron | 35.0% | |
| GGTAAATGTAACTAGGAAGT+AGG | + | chr4.1:36868551-36868570 | MS.gene41187:intron | 35.0% | |
| GTATAAAAAAAAGGGCAGCT+CGG | - | chr4.1:36868197-36868216 | None:intergenic | 35.0% | |
| GTCTTGTGGTAAATGTAACT+AGG | + | chr4.1:36868544-36868563 | MS.gene41187:intron | 35.0% | |
| GTGAACTTTGGTATATAGTC+TGG | - | chr4.1:36865363-36865382 | None:intergenic | 35.0% | |
| GTGGCAAATGAGGTAATTAA+TGG | + | chr4.1:36867133-36867152 | MS.gene41187:intron | 35.0% | |
| GTTTACGCAGTTAAAAGAAG+AGG | + | chr4.1:36869843-36869862 | MS.gene41187:CDS | 35.0% | |
| TAAACATTTGTGCAAGTGCT+TGG | - | chr4.1:36868383-36868402 | None:intergenic | 35.0% | |
| TACACACACACTATTAGATG+TGG | + | chr4.1:36869512-36869531 | MS.gene41187:intron | 35.0% | |
| TACCTTAAGAACAAACTCCA+TGG | - | chr4.1:36865582-36865601 | None:intergenic | 35.0% | |
| TAGGGACTAAATGAGCATTT+AGG | + | chr4.1:36867911-36867930 | MS.gene41187:intron | 35.0% | |
| TATATAGTCTGGTACGGTTA+GGG | - | chr4.1:36865352-36865371 | None:intergenic | 35.0% | |
| TCCCTGCAACATATAATTTC+AGG | - | chr4.1:36866019-36866038 | None:intergenic | 35.0% | |
| TCTTGATAAATGACTGCAGT+AGG | - | chr4.1:36868768-36868787 | None:intergenic | 35.0% | |
| TGAGTTAAGGATTGAATTGG+TGG | - | chr4.1:36865404-36865423 | None:intergenic | 35.0% | |
| TGCAGATTCCTTTAGTAGTT+AGG | + | chr4.1:36867748-36867767 | MS.gene41187:intron | 35.0% | |
| TGGAAAAAGCCAAGAAATTC+CGG | - | chr4.1:36867321-36867340 | None:intergenic | 35.0% | |
| TTCTTAGAAGATTGAACCGT+TGG | + | chr4.1:36865951-36865970 | MS.gene41187:intron | 35.0% | |
| TTGCCACATTAGATAAAGCT+TGG | - | chr4.1:36867120-36867139 | None:intergenic | 35.0% | |
| TTGTTTCAAGAACCATGACT+GGG | - | chr4.1:36867494-36867513 | None:intergenic | 35.0% | |
| ! | AGACATGTTTTATGCAGCAT+AGG | + | chr4.1:36867680-36867699 | MS.gene41187:intron | 35.0% |
| ! | ATCATTTTCTAAGCCCGAAA+AGG | + | chr4.1:36869733-36869752 | MS.gene41187:CDS | 35.0% |
| ! | ATGGCAAATTGGTGATTTAC+AGG | + | chr4.1:36869821-36869840 | MS.gene41187:intron | 35.0% |
| ! | CAACATCTTTTCCATAGCAT+GGG | - | chr4.1:36870361-36870380 | None:intergenic | 35.0% |
| ! | CCAATTTTATTACAGGAACG+TGG | - | chr4.1:36866273-36866292 | None:intergenic | 35.0% |
| ! | GTACCAAGCTTTATCTAATG+TGG | + | chr4.1:36867114-36867133 | MS.gene41187:CDS | 35.0% |
| ! | TCAACATCTTTTCCATAGCA+TGG | - | chr4.1:36870362-36870381 | None:intergenic | 35.0% |
| ! | TTTTCTTTTTGTCCGGAGTT+GGG | - | chr4.1:36870064-36870083 | None:intergenic | 35.0% |
| !! | AACTCTAAAGCAAAAGGGTA+AGG | - | chr4.1:36866201-36866220 | None:intergenic | 35.0% |
| !! | ACTCTAAAGCAAAAGGGTAA+GGG | - | chr4.1:36866200-36866219 | None:intergenic | 35.0% |
| !! | TATAGGTTGTTTACCGACTT+TGG | + | chr4.1:36867066-36867085 | MS.gene41187:intron | 35.0% |
| !! | TTCTTGGCTTTTTCCATTTG+TGG | + | chr4.1:36867325-36867344 | MS.gene41187:CDS | 35.0% |
| !!! | GGAGGATTGCATTTTTTAAC+AGG | + | chr4.1:36866291-36866310 | MS.gene41187:intron | 35.0% |
| !!! | TCCCCTTATTTTTACACAAG+AGG | - | chr4.1:36868083-36868102 | None:intergenic | 35.0% |
| !!! | TGGCCTTAATTTTAGGTTGA+AGG | - | chr4.1:36866687-36866706 | None:intergenic | 35.0% |
| AAAGTGGATCCGGAATTTCT+TGG | + | chr4.1:36867309-36867328 | MS.gene41187:CDS | 40.0% | |
| AAATGATCTCTTAGCTCGTC+CGG | - | chr4.1:36869720-36869739 | None:intergenic | 40.0% | |
| AACTGGGCTGTACTTATAGA+AGG | + | chr4.1:36867027-36867046 | MS.gene41187:intron | 40.0% | |
| AAGAACAAACTCCATGGCAT+CGG | - | chr4.1:36865576-36865595 | None:intergenic | 40.0% | |
| AATAGGATGGTCAGATGGTT+AGG | - | chr4.1:36870329-36870348 | None:intergenic | 40.0% | |
| AATGTGCCAAATAGGGACTA+AGG | + | chr4.1:36867824-36867843 | MS.gene41187:intron | 40.0% | |
| ACCACAGAATGTGCCAAATA+GGG | + | chr4.1:36867817-36867836 | MS.gene41187:intron | 40.0% | |
| ACCGGCATATCTTTCTTGAA+TGG | - | chr4.1:36866707-36866726 | None:intergenic | 40.0% | |
| ACTTCCTTTGACAAAGCAAC+AGG | + | chr4.1:36866428-36866447 | MS.gene41187:CDS | 40.0% | |
| AGAAAGATATGCCGGTAATC+AGG | + | chr4.1:36866711-36866730 | MS.gene41187:CDS | 40.0% | |
| AGAGAGAATCAGGAAAGAAG+TGG | - | chr4.1:36870280-36870299 | None:intergenic | 40.0% | |
| AGCATGGGAAAATCAGGAAT+AGG | - | chr4.1:36870346-36870365 | None:intergenic | 40.0% | |
| AGGCAGTCATATCAAGGAAA+TGG | - | chr4.1:36869390-36869409 | None:intergenic | 40.0% | |
| ATACGAATAAGGCACATGCA+CGG | - | chr4.1:36866364-36866383 | None:intergenic | 40.0% | |
| ATATAGTCTGGTACGGTTAG+GGG | - | chr4.1:36865351-36865370 | None:intergenic | 40.0% | |
| ATATGGTTGCGCAAATTAGG+AGG | + | chr4.1:36869650-36869669 | MS.gene41187:CDS | 40.0% | |
| ATTTCATCTCCATCGTTCCT+CGG | + | chr4.1:36865290-36865309 | MS.gene41187:CDS | 40.0% | |
| CACATTAGGCAGTCATATCA+AGG | - | chr4.1:36869396-36869415 | None:intergenic | 40.0% | |
| CTCGGATGTAAAAAACGAGA+AGG | + | chr4.1:36869945-36869964 | MS.gene41187:CDS | 40.0% | |
| GAGAGAATCAGGAAAGAAGT+GGG | - | chr4.1:36870279-36870298 | None:intergenic | 40.0% | |
| GATATAAGTGTACCTGCCAA+TGG | - | chr4.1:36866912-36866931 | None:intergenic | 40.0% | |
| GCCATTCAAGAAAGATATGC+CGG | + | chr4.1:36866703-36866722 | MS.gene41187:CDS | 40.0% | |
| GTAGGATACACCAAAATGGT+GGG | + | chr4.1:36868110-36868129 | MS.gene41187:intron | 40.0% | |
| GTATATAGTCTGGTACGGTT+AGG | - | chr4.1:36865353-36865372 | None:intergenic | 40.0% | |
| GTGGAAACTGAAGTGAACTT+TGG | - | chr4.1:36865375-36865394 | None:intergenic | 40.0% | |
| TCAAGATGTAGTAGCCTAGT+AGG | + | chr4.1:36868782-36868801 | MS.gene41187:intron | 40.0% | |
| TCCACCAGTTTCAATGTACT+TGG | + | chr4.1:36866174-36866193 | MS.gene41187:intron | 40.0% | |
| TGACAGACTCACAAAGTACA+AGG | - | chr4.1:36867410-36867429 | None:intergenic | 40.0% | |
| TGAGCACAGCTCAACAAATA+TGG | + | chr4.1:36869633-36869652 | MS.gene41187:CDS | 40.0% | |
| TGGGAAAATCAGGAATAGGA+TGG | - | chr4.1:36870342-36870361 | None:intergenic | 40.0% | |
| TGTAACTAGGAAGTAGGAAC+CGG | + | chr4.1:36868557-36868576 | MS.gene41187:intron | 40.0% | |
| TTCCATAGCATGGGAAAATC+AGG | - | chr4.1:36870352-36870371 | None:intergenic | 40.0% | |
| TTCTTATGGATCCCTTCTCT+CGG | + | chr4.1:36867260-36867279 | MS.gene41187:CDS | 40.0% | |
| TTGAAGGGACTGTTAACAGA+AGG | + | chr4.1:36867236-36867255 | MS.gene41187:intron | 40.0% | |
| ! | AAAAAAGTGTACCGCCTACT+AGG | - | chr4.1:36868799-36868818 | None:intergenic | 40.0% |
| ! | ATATTTGTTGAGCTGTGCTC+AGG | - | chr4.1:36869634-36869653 | None:intergenic | 40.0% |
| ! | CTTTGTCAAAGGAAGTGTAG+CGG | - | chr4.1:36866424-36866443 | None:intergenic | 40.0% |
| ! | CTTTTCTTTTTGTCCGGAGT+TGG | - | chr4.1:36870065-36870084 | None:intergenic | 40.0% |
| ! | TGACCTTTCACCATCCTTTT+CGG | - | chr4.1:36869750-36869769 | None:intergenic | 40.0% |
| ! | TGCCATGGAGTTTGTTCTTA+AGG | + | chr4.1:36865577-36865596 | MS.gene41187:CDS | 40.0% |
| ! | TTCCTGATTTTCCCATGCTA+TGG | + | chr4.1:36870347-36870366 | MS.gene41187:intron | 40.0% |
| ! | TTGTTGTAGGTTGAGTCTTG+TGG | + | chr4.1:36868530-36868549 | MS.gene41187:intron | 40.0% |
| ! | TTTTACATCCGAGCCATCAT+CGG | - | chr4.1:36869938-36869957 | None:intergenic | 40.0% |
| ! | TTTTCTAAGCCCGAAAAGGA+TGG | + | chr4.1:36869737-36869756 | MS.gene41187:CDS | 40.0% |
| !! | AATTTAGCATTTTGGGGGTG+GGG | + | chr4.1:36867771-36867790 | MS.gene41187:intron | 40.0% |
| !! | CTAACCTGTTGCTTTGTCAA+AGG | - | chr4.1:36866435-36866454 | None:intergenic | 40.0% |
| !! | GAATTTAGCATTTTGGGGGT+GGG | + | chr4.1:36867770-36867789 | MS.gene41187:intron | 40.0% |
| !! | TATGATGGATTGAAAGACCG+AGG | - | chr4.1:36869796-36869815 | None:intergenic | 40.0% |
| !! | TTAAGGAGCTCGGTGTTTAT+TGG | + | chr4.1:36868502-36868521 | MS.gene41187:intron | 40.0% |
| !! | TTGGACTGGCAATCCATTTA+TGG | - | chr4.1:36866539-36866558 | None:intergenic | 40.0% |
| !!! | GGGGTTTTTTGGTAGAAGAA+TGG | - | chr4.1:36870465-36870484 | None:intergenic | 40.0% |
| !!! | TGGTTTAGCATGGGGTTTTT+TGG | - | chr4.1:36870476-36870495 | None:intergenic | 40.0% |
| AAATAAGGGGAAGACTGCGT+AGG | + | chr4.1:36868092-36868111 | MS.gene41187:intron | 45.0% | |
| AAGGCTATATACCCAAGCTG+GGG | + | chr4.1:36866881-36866900 | MS.gene41187:CDS | 45.0% | |
| AAGTTGTTGCGGTGAAGTGA+AGG | - | chr4.1:36865326-36865345 | None:intergenic | 45.0% | |
| ACGGGAATAGTAGCCAAAGT+CGG | - | chr4.1:36867082-36867101 | None:intergenic | 45.0% | |
| ACTAAAGCTCCCACATACAC+AGG | - | chr4.1:36868171-36868190 | None:intergenic | 45.0% | |
| AGAGGTTGAACTTCATCTGC+GGG | - | chr4.1:36869898-36869917 | None:intergenic | 45.0% | |
| AGATGTAGTAGCCTAGTAGG+CGG | + | chr4.1:36868785-36868804 | MS.gene41187:intron | 45.0% | |
| AGCATTGCTGCTAGACAAAG+TGG | + | chr4.1:36867293-36867312 | MS.gene41187:CDS | 45.0% | |
| AGGGCCAAGTACATTGAAAC+TGG | - | chr4.1:36866181-36866200 | None:intergenic | 45.0% | |
| ATAAAGCAGTCCTTCAGCTC+TGG | - | chr4.1:36865453-36865472 | None:intergenic | 45.0% | |
| ATACCTGACATGCTTACCTG+AGG | - | chr4.1:36868992-36869011 | None:intergenic | 45.0% | |
| ATATGCCGGTAATCAGGTGA+GGG | + | chr4.1:36866717-36866736 | MS.gene41187:intron | 45.0% | |
| CAAGGCTATATACCCAAGCT+GGG | + | chr4.1:36866880-36866899 | MS.gene41187:CDS | 45.0% | |
| CACCACAGAATGTGCCAAAT+AGG | + | chr4.1:36867816-36867835 | MS.gene41187:intron | 45.0% | |
| CAGAGGTTGAACTTCATCTG+CGG | - | chr4.1:36869899-36869918 | None:intergenic | 45.0% | |
| CAGGAACGTGGAACATTTGT+AGG | - | chr4.1:36866261-36866280 | None:intergenic | 45.0% | |
| CCAGCATCTTCATTAACAGC+AGG | - | chr4.1:36869683-36869702 | None:intergenic | 45.0% | |
| CCTGCTGTTAATGAAGATGC+TGG | + | chr4.1:36869680-36869699 | MS.gene41187:CDS | 45.0% | |
| CGTAGGATACACCAAAATGG+TGG | + | chr4.1:36868109-36868128 | MS.gene41187:intron | 45.0% | |
| CTGCGTAGGATACACCAAAA+TGG | + | chr4.1:36868106-36868125 | MS.gene41187:intron | 45.0% | |
| GATGTTGCTGTGCAGAAGAA+CGG | + | chr4.1:36865530-36865549 | MS.gene41187:CDS | 45.0% | |
| GCCAAGTACATTGAAACTGG+TGG | - | chr4.1:36866178-36866197 | None:intergenic | 45.0% | |
| GCTGTTAATGAAGATGCTGG+TGG | + | chr4.1:36869683-36869702 | MS.gene41187:CDS | 45.0% | |
| GGAAATCATGAAACCACCTC+AGG | + | chr4.1:36868973-36868992 | MS.gene41187:CDS | 45.0% | |
| GGAACAAGAAGTTACCGAAG+AGG | + | chr4.1:36870506-36870525 | MS.gene41187:intron | 45.0% | |
| GTAACTAGGAAGTAGGAACC+GGG | + | chr4.1:36868558-36868577 | MS.gene41187:intron | 45.0% | |
| GTTGTTGTCACGTGACTGAA+AGG | + | chr4.1:36868032-36868051 | MS.gene41187:intron | 45.0% | |
| TATGATACAGGTTGCAGCCT+CGG | + | chr4.1:36869776-36869795 | MS.gene41187:intron | 45.0% | |
| TATGCAGCATAGGTGCAAGT+TGG | + | chr4.1:36867690-36867709 | MS.gene41187:intron | 45.0% | |
| TCAAGGCTATATACCCAAGC+TGG | + | chr4.1:36866879-36866898 | MS.gene41187:CDS | 45.0% | |
| TCAGGAATAGGATGGTCAGA+TGG | - | chr4.1:36870334-36870353 | None:intergenic | 45.0% | |
| TCCCTATTTGGCACATTCTG+TGG | - | chr4.1:36867821-36867840 | None:intergenic | 45.0% | |
| TGTCTAGCAGCAATGCTAGT+GGG | - | chr4.1:36867290-36867309 | None:intergenic | 45.0% | |
| TTCTCACTATCTGTGCCATC+AGG | + | chr4.1:36869139-36869158 | MS.gene41187:CDS | 45.0% | |
| TTGAACCTCTTGGGGAACTT+TGG | - | chr4.1:36870541-36870560 | None:intergenic | 45.0% | |
| TTGGAGCTTATTCCCAGTCA+TGG | + | chr4.1:36867479-36867498 | MS.gene41187:intron | 45.0% | |
| TTGGTACAGACCAATCCAGA+CGG | - | chr4.1:36867101-36867120 | None:intergenic | 45.0% | |
| TTGTCTAGCAGCAATGCTAG+TGG | - | chr4.1:36867291-36867310 | None:intergenic | 45.0% | |
| TTTGGATGCATACGCCTCTT+CGG | - | chr4.1:36870523-36870542 | None:intergenic | 45.0% | |
| ! | GACCTTTCACCATCCTTTTC+GGG | - | chr4.1:36869749-36869768 | None:intergenic | 45.0% |
| ! | GTGCATGTGCCTTATTCGTA+TGG | + | chr4.1:36866363-36866382 | MS.gene41187:CDS | 45.0% |
| ! | TGAAGTTCAACCTCTGGCTT+CGG | + | chr4.1:36869903-36869922 | MS.gene41187:CDS | 45.0% |
| ! | TTCTGTTTCCGATGATGGCT+CGG | + | chr4.1:36869927-36869946 | MS.gene41187:CDS | 45.0% |
| !! | ATTTAGCATTTTGGGGGTGG+AGG | + | chr4.1:36867772-36867791 | MS.gene41187:intron | 45.0% |
| !! | ATTTAGCATTTTGGGGGTGG+GGG | + | chr4.1:36867772-36867791 | MS.gene41187:intron | 45.0% |
| !! | GGAATTTAGCATTTTGGGGG+TGG | + | chr4.1:36867769-36867788 | MS.gene41187:intron | 45.0% |
| !! | TTTAGCATTTTGGGGGTGGA+GGG | + | chr4.1:36867773-36867792 | MS.gene41187:intron | 45.0% |
| !!! | TGGTTTTATCTCCGATGCCA+TGG | + | chr4.1:36865562-36865581 | MS.gene41187:CDS | 45.0% |
| !! | AAATTTGAAAATTAAAAAAT+AGG | - | chr4.1:36869230-36869249 | None:intergenic | 5.0% |
| AACACCCCTCACCTGATTAC+CGG | - | chr4.1:36866725-36866744 | None:intergenic | 50.0% | |
| AACATCCGTGGAAGTGGAAG+TGG | - | chr4.1:36865516-36865535 | None:intergenic | 50.0% | |
| ACAACTTTACCGTTGCGCCA+AGG | - | chr4.1:36868017-36868036 | None:intergenic | 50.0% | |
| ACATACACAGGTCCAGGAAG+GGG | - | chr4.1:36868159-36868178 | None:intergenic | 50.0% | |
| ACCAGGCCTCTTGAATTTCC+TGG | - | chr4.1:36870246-36870265 | None:intergenic | 50.0% | |
| AGCCCGAAAAGGATGGTGAA+AGG | + | chr4.1:36869744-36869763 | MS.gene41187:CDS | 50.0% | |
| AGGATGGTCAGATGGTTAGG+AGG | - | chr4.1:36870326-36870345 | None:intergenic | 50.0% | |
| AGTAGGCGGAAGAGAGAATC+AGG | - | chr4.1:36870290-36870309 | None:intergenic | 50.0% | |
| CACATACACAGGTCCAGGAA+GGG | - | chr4.1:36868160-36868179 | None:intergenic | 50.0% | |
| CACTTCCACTTCCACTTCCA+CGG | + | chr4.1:36865508-36865527 | MS.gene41187:CDS | 50.0% | |
| CCAGGCCTCTTGAATTTCCT+GGG | - | chr4.1:36870245-36870264 | None:intergenic | 50.0% | |
| CGCAGATGAAGTTCAACCTC+TGG | + | chr4.1:36869897-36869916 | MS.gene41187:CDS | 50.0% | |
| CTGTGGTGAACAGACCATAC+CGG | - | chr4.1:36867804-36867823 | None:intergenic | 50.0% | |
| CTTCCTGGACCTGTGTATGT+GGG | + | chr4.1:36868159-36868178 | MS.gene41187:intron | 50.0% | |
| CTTTGGCTACTATTCCCGTC+TGG | + | chr4.1:36867083-36867102 | MS.gene41187:CDS | 50.0% | |
| GAGAAGTAGCCGATCATGAG+TGG | - | chr4.1:36869124-36869143 | None:intergenic | 50.0% | |
| GAGGGAAGGGGAAACAAAGT+AGG | - | chr4.1:36870307-36870326 | None:intergenic | 50.0% | |
| GATATGCCGGTAATCAGGTG+AGG | + | chr4.1:36866716-36866735 | MS.gene41187:intron | 50.0% | |
| GCTACTATTCCCGTCTGGAT+TGG | + | chr4.1:36867088-36867107 | MS.gene41187:CDS | 50.0% | |
| GCTGCTAGACAAAGTGGATC+CGG | + | chr4.1:36867299-36867318 | MS.gene41187:CDS | 50.0% | |
| GCTGGTGGAATTATTACGGC+CGG | + | chr4.1:36869698-36869717 | MS.gene41187:CDS | 50.0% | |
| GGAAGGGGAAACAAAGTAGG+CGG | - | chr4.1:36870304-36870323 | None:intergenic | 50.0% | |
| GGAAGTGGAAGTGACTGCAT+CGG | - | chr4.1:36865501-36865520 | None:intergenic | 50.0% | |
| GGATGGTCAGATGGTTAGGA+GGG | - | chr4.1:36870325-36870344 | None:intergenic | 50.0% | |
| GGTTAGGGGAGAAGTTGTTG+CGG | - | chr4.1:36865337-36865356 | None:intergenic | 50.0% | |
| GTCACGTGACTGAAAGGTCA+CGG | + | chr4.1:36868038-36868057 | MS.gene41187:intron | 50.0% | |
| GTCAGATGGTTAGGAGGGAA+GGG | - | chr4.1:36870320-36870339 | None:intergenic | 50.0% | |
| TATGCCGGTAATCAGGTGAG+GGG | + | chr4.1:36866718-36866737 | MS.gene41187:intron | 50.0% | |
| TCACGTGACTGAAAGGTCAC+GGG | + | chr4.1:36868039-36868058 | MS.gene41187:intron | 50.0% | |
| TCAGATGGTTAGGAGGGAAG+GGG | - | chr4.1:36870319-36870338 | None:intergenic | 50.0% | |
| TCGGCTTCTGTTTCCGATGA+TGG | + | chr4.1:36869922-36869941 | MS.gene41187:CDS | 50.0% | |
| TGCATCCAAAGTTCCCCAAG+AGG | + | chr4.1:36870533-36870552 | MS.gene41187:CDS | 50.0% | |
| TGGTACAGACCAATCCAGAC+GGG | - | chr4.1:36867100-36867119 | None:intergenic | 50.0% | |
| TTATGGATCCCTTCTCTCGG+TGG | + | chr4.1:36867263-36867282 | MS.gene41187:CDS | 50.0% | |
| TTGCGGTGAAGTGAAGGAAG+TGG | - | chr4.1:36865320-36865339 | None:intergenic | 50.0% | |
| TTTCTACCAAGGGAGAGCCT+TGG | + | chr4.1:36867997-36868016 | MS.gene41187:intron | 50.0% | |
| ! | CAGAAGAACGGAGGTTGGTT+TGG | + | chr4.1:36865542-36865561 | MS.gene41187:CDS | 50.0% |
| !! | AAGTGGGTTGAGACAGAACC+AGG | - | chr4.1:36870263-36870282 | None:intergenic | 50.0% |
| !! | CAATGGGTTAACCCCAGCTT+GGG | - | chr4.1:36866895-36866914 | None:intergenic | 50.0% |
| !! | TTAGCATTTTGGGGGTGGAG+GGG | + | chr4.1:36867774-36867793 | MS.gene41187:intron | 50.0% |
| !! | TTTAGCATTTTGGGGGTGGG+GGG | + | chr4.1:36867849-36867868 | MS.gene41187:intron | 50.0% |
| AGGTGTTCGGATCCCAACTC+CGG | + | chr4.1:36870049-36870068 | MS.gene41187:intron | 55.0% | |
| AGTGGAGTTCCGAGGAACGA+TGG | - | chr4.1:36865302-36865321 | None:intergenic | 55.0% | |
| ATGGCCATCCACCTTTGGGT+TGG | + | chr4.1:36868888-36868907 | MS.gene41187:CDS | 55.0% | |
| CACAGCAACATCCGTGGAAG+TGG | - | chr4.1:36865522-36865541 | None:intergenic | 55.0% | |
| CAGGATGGCCATCCACCTTT+GGG | + | chr4.1:36868884-36868903 | MS.gene41187:intron | 55.0% | |
| CATGCCAACCCAAAGGTGGA+TGG | - | chr4.1:36868895-36868914 | None:intergenic | 55.0% | |
| CCAAGCTGGGGTTAACCCAT+TGG | + | chr4.1:36866893-36866912 | MS.gene41187:CDS | 55.0% | |
| CCACATACACAGGTCCAGGA+AGG | - | chr4.1:36868161-36868180 | None:intergenic | 55.0% | |
| CCACCTCAGGTAAGCATGTC+AGG | + | chr4.1:36868986-36869005 | MS.gene41187:intron | 55.0% | |
| CCCAGGAAATTCAAGAGGCC+TGG | + | chr4.1:36870242-36870261 | MS.gene41187:intron | 55.0% | |
| CCTGACATGCTTACCTGAGG+TGG | - | chr4.1:36868989-36869008 | None:intergenic | 55.0% | |
| CCTTCCTGGACCTGTGTATG+TGG | + | chr4.1:36868158-36868177 | MS.gene41187:intron | 55.0% | |
| CTGTGCAGAAGAACGGAGGT+TGG | + | chr4.1:36865537-36865556 | MS.gene41187:CDS | 55.0% | |
| CTTCTGCACAGCAACATCCG+TGG | - | chr4.1:36865528-36865547 | None:intergenic | 55.0% | |
| GAAACAGAAGCCGAAGCCAG+AGG | - | chr4.1:36869916-36869935 | None:intergenic | 55.0% | |
| GCAGTGTCATGCCAACCCAA+AGG | - | chr4.1:36868902-36868921 | None:intergenic | 55.0% | |
| GGTCAGATGGTTAGGAGGGA+AGG | - | chr4.1:36870321-36870340 | None:intergenic | 55.0% | |
| GTGAAGGAAGTGGAGTTCCG+AGG | - | chr4.1:36865310-36865329 | None:intergenic | 55.0% | |
| GTGTCATGCCAACCCAAAGG+TGG | - | chr4.1:36868899-36868918 | None:intergenic | 55.0% | |
| GTTGCTGTGCAGAAGAACGG+AGG | + | chr4.1:36865533-36865552 | MS.gene41187:CDS | 55.0% | |
| TAGTGGGACCACCGAGAGAA+GGG | - | chr4.1:36867274-36867293 | None:intergenic | 55.0% | |
| ! | AAAATGGTGGGACCCCTTCC+TGG | + | chr4.1:36868122-36868141 | MS.gene41187:intron | 55.0% |
| ! | AGGAAGGGGTCCCACCATTT+TGG | - | chr4.1:36868123-36868142 | None:intergenic | 55.0% |
| ! | AGTGACTGCATCGGCCGTAA+CGG | - | chr4.1:36865492-36865511 | None:intergenic | 55.0% |
| ! | TTCAGCTCTGGCGAAGACAC+CGG | - | chr4.1:36865441-36865460 | None:intergenic | 55.0% |
| !! | CCAATGGGTTAACCCCAGCT+TGG | - | chr4.1:36866896-36866915 | None:intergenic | 55.0% |
| !! | TTAGCATTTTGGGGGTGGGG+GGG | + | chr4.1:36867850-36867869 | MS.gene41187:intron | 55.0% |
| AAGGGAGAGCCTTGGCGCAA+CGG | + | chr4.1:36868005-36868024 | MS.gene41187:intron | 60.0% | |
| CTAGTGGGACCACCGAGAGA+AGG | - | chr4.1:36867275-36867294 | None:intergenic | 60.0% | |
| GCAGGATGGCCATCCACCTT+TGG | + | chr4.1:36868883-36868902 | MS.gene41187:intron | 60.0% | |
| GCTCCCACATACACAGGTCC+AGG | - | chr4.1:36868165-36868184 | None:intergenic | 60.0% | |
| GCTGGGGTTAACCCATTGGC+AGG | + | chr4.1:36866897-36866916 | MS.gene41187:CDS | 60.0% | |
| GGTGTCTTCGCCAGAGCTGA+AGG | + | chr4.1:36865440-36865459 | MS.gene41187:CDS | 60.0% | |
| ATCGGCCGTAACGGCGGCAT+CGG | - | chr4.1:36865483-36865502 | None:intergenic | 65.0% | |
| GACCCCTTCCTGGACCTGGT+GGG | + | chr4.1:36868132-36868151 | MS.gene41187:intron | 65.0% | |
| GGTCCCACCAGGTCCAGGAA+GGG | - | chr4.1:36868138-36868157 | None:intergenic | 65.0% | |
| GTCCCACCAGGTCCAGGAAG+GGG | - | chr4.1:36868137-36868156 | None:intergenic | 65.0% | |
| GTTGCGCCAAGGCTCTCCCT+TGG | - | chr4.1:36868006-36868025 | None:intergenic | 65.0% | |
| ! | GACTGCATCGGCCGTAACGG+CGG | - | chr4.1:36865489-36865508 | None:intergenic | 65.0% |
| ! | GGTGGAGGGGTATGCCGGTA+TGG | + | chr4.1:36867787-36867806 | MS.gene41187:intron | 65.0% |
| ! | TTGGGGGTGGAGGGGTATGC+CGG | + | chr4.1:36867782-36867801 | MS.gene41187:intron | 65.0% |
| GAAGGGGTCCCACCAGGTCC+AGG | - | chr4.1:36868143-36868162 | None:intergenic | 70.0% | |
| GACCTGGTGGGACCCCTTCC+TGG | + | chr4.1:36868144-36868163 | MS.gene41187:intron | 70.0% | |
| GCTCGCCGATGCCGCCGTTA+CGG | + | chr4.1:36865475-36865494 | MS.gene41187:CDS | 70.0% | |
| GGACCCCTTCCTGGACCTGG+TGG | + | chr4.1:36868131-36868150 | MS.gene41187:intron | 70.0% | |
| GGGTCCCACCAGGTCCAGGA+AGG | - | chr4.1:36868139-36868158 | None:intergenic | 70.0% | |
| GTCCAGGAAGGGGTCCCACC+AGG | - | chr4.1:36868127-36868146 | None:intergenic | 70.0% | |
| GTGGGACCCCTTCCTGGACC+TGG | + | chr4.1:36868128-36868147 | MS.gene41187:intron | 70.0% | |
| ! | GGTGGGGGGGTATGCCGGTA+TGG | + | chr4.1:36867863-36867882 | MS.gene41187:intron | 70.0% |
| ! | TTGGGGGTGGGGGGGTATGC+CGG | + | chr4.1:36867858-36867877 | MS.gene41187:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 36865275 | 36870614 | 36865275 | ID=MS.gene41187 |
| chr4.1 | mRNA | 36865275 | 36870614 | 36865275 | ID=MS.gene41187.t1;Parent=MS.gene41187 |
| chr4.1 | exon | 36865275 | 36865598 | 36865275 | ID=MS.gene41187.t1.exon1;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36865275 | 36865598 | 36865275 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36866339 | 36866449 | 36866339 | ID=MS.gene41187.t1.exon2;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36866339 | 36866449 | 36866339 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36866658 | 36866732 | 36866658 | ID=MS.gene41187.t1.exon3;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36866658 | 36866732 | 36866658 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36866858 | 36866918 | 36866858 | ID=MS.gene41187.t1.exon4;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36866858 | 36866918 | 36866858 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36867071 | 36867144 | 36867071 | ID=MS.gene41187.t1.exon5;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36867071 | 36867144 | 36867071 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36867242 | 36867346 | 36867242 | ID=MS.gene41187.t1.exon6;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36867242 | 36867346 | 36867242 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36868887 | 36868994 | 36868887 | ID=MS.gene41187.t1.exon7;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36868887 | 36868994 | 36868887 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36869073 | 36869176 | 36869073 | ID=MS.gene41187.t1.exon8;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36869073 | 36869176 | 36869073 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36869616 | 36869765 | 36869616 | ID=MS.gene41187.t1.exon9;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36869616 | 36869765 | 36869616 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36869843 | 36869966 | 36869843 | ID=MS.gene41187.t1.exon10;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36869843 | 36869966 | 36869843 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| chr4.1 | exon | 36870507 | 36870614 | 36870507 | ID=MS.gene41187.t1.exon11;Parent=MS.gene41187.t1 |
| chr4.1 | CDS | 36870507 | 36870614 | 36870507 | ID=cds.MS.gene41187.t1;Parent=MS.gene41187.t1 |
| Gene Sequence |
| Protein sequence |
