Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57061.t1 | KEH41049.1 | 91.8 | 122 | 10 | 0 | 1 | 122 | 101 | 222 | 4.70E-58 | 234.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57061.t1 | O22795 | 75.2 | 125 | 23 | 2 | 111 | 230 | 19 | 140 | 6.9e-42 | 172.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57061.t1 | A0A072VG90 | 91.8 | 122 | 10 | 0 | 1 | 122 | 101 | 222 | 3.4e-58 | 234.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57061 | 0.881029 | 3.37E-70 | -1.69E-46 |
| MS.gene049173 | MS.gene57061 | 0.888226 | 7.13E-73 | -1.69E-46 |
| MS.gene049217 | MS.gene57061 | 0.862367 | 5.33E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene57061 | 0.852741 | 3.78E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene57061 | 0.800395 | 1.47E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene57061 | 0.891078 | 5.51E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene57061 | 0.866257 | 3.25E-65 | -1.69E-46 |
| MS.gene04939 | MS.gene57061 | 0.838791 | 2.33E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene57061 | 0.819836 | 9.42E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene57061 | 0.8195 | 1.12E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene57061 | 0.818269 | 2.14E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene57061 | 0.810791 | 9.67E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene57061 | 0.806643 | 7.45E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene57061 | 0.904421 | 1.25E-79 | -1.69E-46 |
| MS.gene050165 | MS.gene57061 | 0.900895 | 4.63E-78 | -1.69E-46 |
| MS.gene050333 | MS.gene57061 | 0.904504 | 1.15E-79 | -1.69E-46 |
| MS.gene050444 | MS.gene57061 | 0.862475 | 4.94E-64 | -1.69E-46 |
| MS.gene050475 | MS.gene57061 | -0.847093 | 1.44E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene57061 | 0.870098 | 1.89E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene57061 | 0.849652 | 2.82E-60 | -1.69E-46 |
| MS.gene050541 | MS.gene57061 | -0.840742 | 7.24E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene57061 | 0.861612 | 9.08E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene57061 | 0.863991 | 1.68E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene57061 | 0.855622 | 5.58E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene57061 | 0.828404 | 9.16E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene57061 | 0.830343 | 3.10E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene57061 | 0.854667 | 1.06E-61 | -1.69E-46 |
| MS.gene05079 | MS.gene57061 | -0.809891 | 1.51E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene57061 | 0.808998 | 2.35E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene57061 | 0.816768 | 4.66E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene57061 | 0.84961 | 2.90E-60 | -1.69E-46 |
| MS.gene05100 | MS.gene57061 | 0.888721 | 4.59E-73 | -1.69E-46 |
| MS.gene051228 | MS.gene57061 | 0.85079 | 1.35E-60 | -1.69E-46 |
| MS.gene051434 | MS.gene57061 | 0.802444 | 5.59E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene57061 | 0.832691 | 8.18E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene57061 | 0.810515 | 1.11E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene57061 | 0.806265 | 8.95E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene57061 | 0.85367 | 2.05E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene57061 | 0.83741 | 5.28E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene57061 | 0.888061 | 8.24E-73 | -1.69E-46 |
| MS.gene052164 | MS.gene57061 | 0.806728 | 7.15E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene57061 | 0.864215 | 1.43E-64 | -1.69E-46 |
| MS.gene052290 | MS.gene57061 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene57061 | 0.845458 | 4.01E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene57061 | 0.805437 | 1.34E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene57061 | 0.811595 | 6.47E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene57061 | 0.81403 | 1.90E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene57061 | 0.825781 | 3.89E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene57061 | 0.811209 | 7.85E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene57061 | 0.863422 | 2.52E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene57061 | 0.80093 | 1.14E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene57061 | 0.803125 | 4.05E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene57061 | 0.839422 | 1.60E-57 | -1.69E-46 |
| MS.gene053284 | MS.gene57061 | 0.828927 | 6.85E-55 | -1.69E-46 |
| MS.gene053285 | MS.gene57061 | 0.829555 | 4.82E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene57061 | 0.834621 | 2.70E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene57061 | 0.832423 | 9.53E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene57061 | 0.862427 | 5.11E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene57061 | 0.820574 | 6.38E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene57061 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene57061 | 0.806988 | 6.30E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene57061 | 0.843681 | 1.21E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene57061 | 0.871686 | 5.66E-67 | -1.69E-46 |
| MS.gene05470 | MS.gene57061 | 0.816721 | 4.78E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene57061 | 0.871779 | 5.27E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene57061 | 0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene57061 | 0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene055254 | MS.gene57061 | 0.818412 | 1.99E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene57061 | 0.876649 | 1.18E-68 | -1.69E-46 |
| MS.gene055397 | MS.gene57061 | 0.843991 | 9.97E-59 | -1.69E-46 |
| MS.gene055499 | MS.gene57061 | 0.841325 | 5.09E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene57061 | 0.859537 | 3.86E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene57061 | 0.824434 | 8.09E-54 | -1.69E-46 |
| MS.gene055634 | MS.gene57061 | 0.811456 | 6.94E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene57061 | 0.85122 | 1.02E-60 | -1.69E-46 |
| MS.gene055638 | MS.gene57061 | 0.853411 | 2.43E-61 | -1.69E-46 |
| MS.gene055647 | MS.gene57061 | 0.833024 | 6.76E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene57061 | 0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene57061 | 0.825985 | 3.48E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene57061 | 0.828311 | 9.65E-55 | -1.69E-46 |
| MS.gene055776 | MS.gene57061 | 0.827982 | 1.16E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene57061 | 0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene57061 | 0.826072 | 3.32E-54 | -1.69E-46 |
| MS.gene055956 | MS.gene57061 | -0.826545 | 2.56E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene57061 | 0.860067 | 2.67E-63 | -1.69E-46 |
| MS.gene056374 | MS.gene57061 | 0.841946 | 3.49E-58 | -1.69E-46 |
| MS.gene056449 | MS.gene57061 | 0.808746 | 2.66E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene57061 | 0.818704 | 1.71E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene57061 | 0.838412 | 2.92E-57 | -1.69E-46 |
| MS.gene056549 | MS.gene57061 | 0.821502 | 3.90E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene57061 | 0.872217 | 3.77E-67 | -1.69E-46 |
| MS.gene056692 | MS.gene57061 | 0.816512 | 5.32E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene57061 | 0.864694 | 1.01E-64 | -1.69E-46 |
| MS.gene057246 | MS.gene57061 | 0.809658 | 1.70E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene57061 | 0.825015 | 5.90E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene57061 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene57061 | 0.849286 | 3.56E-60 | -1.69E-46 |
| MS.gene057831 | MS.gene57061 | 0.822833 | 1.92E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene57061 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene57061 | 0.876202 | 1.68E-68 | -1.69E-46 |
| MS.gene058544 | MS.gene57061 | 0.835274 | 1.85E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene57061 | 0.85618 | 3.83E-62 | -1.69E-46 |
| MS.gene058773 | MS.gene57061 | 0.892755 | 1.18E-74 | -1.69E-46 |
| MS.gene058838 | MS.gene57061 | 0.824055 | 9.93E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene57061 | 0.890719 | 7.64E-74 | -1.69E-46 |
| MS.gene059023 | MS.gene57061 | 0.836193 | 1.08E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene57061 | 0.843413 | 1.42E-58 | -1.69E-46 |
| MS.gene05912 | MS.gene57061 | 0.819856 | 9.32E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene57061 | 0.828386 | 9.25E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene57061 | 0.802723 | 4.90E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene57061 | 0.81309 | 3.05E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene57061 | 0.902323 | 1.09E-78 | -1.69E-46 |
| MS.gene059718 | MS.gene57061 | 0.863651 | 2.14E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene57061 | 0.841129 | 5.73E-58 | -1.69E-46 |
| MS.gene059858 | MS.gene57061 | 0.818666 | 1.74E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene57061 | 0.831671 | 1.46E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene57061 | 0.835999 | 1.21E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene57061 | 0.83419 | 3.46E-56 | -1.69E-46 |
| MS.gene060336 | MS.gene57061 | -0.806808 | 6.87E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene57061 | -0.826918 | 2.08E-54 | -1.69E-46 |
| MS.gene060341 | MS.gene57061 | 0.827032 | 1.96E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene57061 | 0.837316 | 5.59E-57 | -1.69E-46 |
| MS.gene060727 | MS.gene57061 | 0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene57061 | 0.858693 | 6.92E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene57061 | 0.815144 | 1.07E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene57061 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene57061 | 0.879864 | 8.79E-70 | -1.69E-46 |
| MS.gene061171 | MS.gene57061 | 0.816997 | 4.14E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene57061 | 0.853592 | 2.16E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57061.t1 | MTR_1g041315 | 91.803 | 122 | 10 | 0 | 1 | 122 | 101 | 222 | 4.47e-76 | 238 |
| MS.gene57061.t1 | MTR_1g041320 | 86.066 | 122 | 17 | 0 | 109 | 230 | 22 | 143 | 2.63e-72 | 217 |
| MS.gene57061.t1 | MTR_7g066350 | 59.375 | 128 | 48 | 3 | 1 | 126 | 96 | 221 | 1.36e-37 | 136 |
| MS.gene57061.t1 | MTR_7g066280 | 59.322 | 118 | 42 | 3 | 2 | 116 | 10 | 124 | 3.93e-35 | 129 |
| MS.gene57061.t1 | MTR_7g066340 | 55.039 | 129 | 48 | 6 | 4 | 126 | 102 | 226 | 1.18e-30 | 118 |
| MS.gene57061.t1 | MTR_7g066400 | 47.541 | 122 | 48 | 2 | 1 | 122 | 83 | 188 | 4.50e-27 | 107 |
| MS.gene57061.t1 | MTR_7g066260 | 45.736 | 129 | 66 | 4 | 1 | 126 | 102 | 229 | 4.09e-25 | 102 |
| MS.gene57061.t1 | MTR_7g066570 | 47.748 | 111 | 55 | 2 | 1 | 110 | 101 | 209 | 4.59e-23 | 97.4 |
| MS.gene57061.t1 | MTR_1g014060 | 41.600 | 125 | 68 | 4 | 3 | 125 | 89 | 210 | 3.76e-21 | 90.9 |
| MS.gene57061.t1 | MTR_7g058710 | 40.909 | 132 | 70 | 4 | 1 | 126 | 87 | 216 | 1.06e-20 | 90.1 |
| MS.gene57061.t1 | MTR_7g066360 | 42.735 | 117 | 65 | 2 | 1 | 117 | 101 | 215 | 1.79e-20 | 89.7 |
| MS.gene57061.t1 | MTR_7g066310 | 43.697 | 119 | 33 | 4 | 2 | 117 | 95 | 182 | 6.32e-20 | 87.8 |
| MS.gene57061.t1 | MTR_7g058700 | 38.400 | 125 | 70 | 3 | 1 | 120 | 592 | 714 | 3.35e-18 | 83.6 |
| MS.gene57061.t1 | MTR_7g066290 | 36.522 | 115 | 70 | 3 | 6 | 118 | 107 | 220 | 2.95e-16 | 77.4 |
| MS.gene57061.t1 | MTR_7g066410 | 34.752 | 141 | 81 | 5 | 1 | 134 | 97 | 233 | 2.56e-14 | 72.0 |
| MS.gene57061.t1 | MTR_7g012680 | 42.268 | 97 | 52 | 3 | 1 | 96 | 101 | 194 | 4.47e-13 | 68.2 |
| MS.gene57061.t1 | MTR_7g063900 | 34.014 | 147 | 84 | 7 | 4 | 144 | 100 | 239 | 3.59e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57061.t1 | AT2G33450 | 81.034 | 116 | 12 | 3 | 121 | 230 | 29 | 140 | 3.80e-58 | 181 |
Find 46 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTTTCTTCAATTCCTTTA+AGG | 0.026457 | 1.1:-25125002 | None:intergenic |
| CGATATTCAATTTGAGTTTC+CGG | 0.178358 | 1.1:-25124843 | None:intergenic |
| GGCCCTGTTTGATTTCTTTC+CGG | 0.253338 | 1.1:-25128770 | None:intergenic |
| ACTGCAATTTCTTTGTCTTA+TGG | 0.260657 | 1.1:-25128813 | None:intergenic |
| AGTTTCATAAATTCCCTTAA+AGG | 0.269557 | 1.1:+25124988 | MS.gene57061:CDS |
| ATCAAGTCCATTCTTCTCTA+TGG | 0.282588 | 1.1:-25128920 | None:intergenic |
| AGGTATTGTGTGAGCTTCTT+CGG | 0.299011 | 1.1:+25124925 | MS.gene57061:CDS |
| CTCTTTCTTGCTGATATTAA+CGG | 0.315978 | 1.1:-25125154 | None:intergenic |
| AGACTTGCAAAATTGAAAAT+AGG | 0.330828 | 1.1:+25124905 | MS.gene57061:CDS |
| GCTTTCTTCAATTCCTTTAA+GGG | 0.331002 | 1.1:-25125001 | None:intergenic |
| TTCCCATGGGACTTTATTAC+CGG | 0.373754 | 1.1:+25124824 | None:intergenic |
| GGTATTGTGTGAGCTTCTTC+GGG | 0.386622 | 1.1:+25124926 | MS.gene57061:CDS |
| TTCTGACGATCTTTATGTCT+TGG | 0.393766 | 1.1:+25125056 | MS.gene57061:CDS |
| AAGAGAGTTTGGTGGGAAGC+TGG | 0.407615 | 1.1:+25128853 | MS.gene57061:CDS |
| ACCTCCAGTACAAGAGAGTT+TGG | 0.413996 | 1.1:+25128842 | MS.gene57061:CDS |
| CTAGCAACAATTGGTTGAAA+AGG | 0.417846 | 1.1:-25127233 | None:intergenic |
| CTTTGTCTTATGGTTTGAAA+AGG | 0.427226 | 1.1:-25128803 | None:intergenic |
| GTTTGAAAAGGATACTTTGT+TGG | 0.430284 | 1.1:-25128791 | None:intergenic |
| AATAACTTACTAGCAACAAT+TGG | 0.433902 | 1.1:-25127242 | None:intergenic |
| GTTTGATTTCTTTCCGGTGA+AGG | 0.440508 | 1.1:-25128764 | None:intergenic |
| TATGTCTTGGCGAATGAAGT+TGG | 0.447005 | 1.1:+25125069 | MS.gene57061:CDS |
| TCACCGGAAAGAAATCAAAC+AGG | 0.457839 | 1.1:+25128767 | MS.gene57061:CDS |
| AAAGCTTCGTTTGTCAACTA+AGG | 0.463346 | 1.1:+25128888 | MS.gene57061:CDS |
| TTCTTGAGTTCTCAGTTAAG+TGG | 0.484465 | 1.1:+25127155 | MS.gene57061:CDS |
| CCCACCAAACTCTCTTGTAC+TGG | 0.486040 | 1.1:-25128846 | None:intergenic |
| TGAAAAGGAGAAGCAACAAT+TGG | 0.492986 | 1.1:-25127218 | None:intergenic |
| TTTGATTTCTTTCCGGTGAA+GGG | 0.493506 | 1.1:-25128763 | None:intergenic |
| CGTTAATATCAGCAAGAAAG+AGG | 0.508201 | 1.1:+25125155 | MS.gene57061:CDS |
| AGAGAGTTTGGTGGGAAGCT+GGG | 0.527154 | 1.1:+25128854 | MS.gene57061:CDS |
| TTGAAAACCATAGAGAAGAA+TGG | 0.536514 | 1.1:+25128913 | MS.gene57061:CDS |
| GAGAGAGTGTGTCCCTTCAC+CGG | 0.545165 | 1.1:+25128751 | MS.gene57061:intron |
| TTAAATCTTTGTCAGAAGCA+TGG | 0.555180 | 1.1:+25125099 | MS.gene57061:CDS |
| TGCAAGTCTTGTCCTTGCAG+TGG | 0.555411 | 1.1:-25124891 | None:intergenic |
| CTTAAAGGAATTGAAGAAAG+CGG | 0.567851 | 1.1:+25125003 | MS.gene57061:CDS |
| CCAGTACAAGAGAGTTTGGT+GGG | 0.583767 | 1.1:+25128846 | MS.gene57061:CDS |
| ACCAAACTCTCTTGTACTGG+AGG | 0.590235 | 1.1:-25128843 | None:intergenic |
| TTTCCGGTAATAAAGTCCCA+TGG | 0.599022 | 1.1:-25124827 | None:intergenic |
| GGAGAAGCAACAATTGGTGA+GGG | 0.617414 | 1.1:-25127212 | None:intergenic |
| TTCCGGTAATAAAGTCCCAT+GGG | 0.623389 | 1.1:-25124826 | None:intergenic |
| GTGGTCTCAGAATCTCGTCT+CGG | 0.624527 | 1.1:+25127174 | MS.gene57061:CDS |
| AGGAGAAGCAACAATTGGTG+AGG | 0.627644 | 1.1:-25127213 | None:intergenic |
| TTGCAGTGGTAGTACCTCAA+CGG | 0.633931 | 1.1:-25124877 | None:intergenic |
| TCCAGTACAAGAGAGTTTGG+TGG | 0.651100 | 1.1:+25128845 | MS.gene57061:CDS |
| CACCGGAAAGAAATCAAACA+GGG | 0.654830 | 1.1:+25128768 | MS.gene57061:CDS |
| TCGATGAATCAGAGCCGTTG+AGG | 0.674772 | 1.1:+25124863 | MS.gene57061:CDS |
| GTTGAGGTACTACCACTGCA+AGG | 0.716243 | 1.1:+25124879 | MS.gene57061:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATCATAAAGTTAA+TGG | - | chr1.1:25126786-25126805 | None:intergenic | 10.0% |
| !! | AATATTTACTATTAACTTTA+GGG | + | chr1.1:25126487-25126506 | MS.gene57061:intron | 10.0% |
| !! | AATTATATCATAAAGTTAAT+GGG | - | chr1.1:25126785-25126804 | None:intergenic | 10.0% |
| !! | ACAATAAAAATAAAAAAGAA+CGG | - | chr1.1:25127363-25127382 | None:intergenic | 10.0% |
| !! | ATTTACAATAATAATAATCA+GGG | - | chr1.1:25128695-25128714 | None:intergenic | 10.0% |
| !! | TAAAGAAAATAATATTTGAA+GGG | + | chr1.1:25126841-25126860 | MS.gene57061:intron | 10.0% |
| !! | TAATATTTACTATTAACTTT+AGG | + | chr1.1:25126486-25126505 | MS.gene57061:intron | 10.0% |
| !! | TTAAAGAAAATAATATTTGA+AGG | + | chr1.1:25126840-25126859 | MS.gene57061:intron | 10.0% |
| !!! | ATTTATTGAAGTTATTTTAA+TGG | + | chr1.1:25127777-25127796 | MS.gene57061:intron | 10.0% |
| !!! | TTATTTTTATTGTCATATTT+TGG | + | chr1.1:25127370-25127389 | MS.gene57061:intron | 10.0% |
| !! | AAGAAATGTTACAATAATTA+AGG | + | chr1.1:25127932-25127951 | MS.gene57061:intron | 15.0% |
| !! | ATATTTACTATTAACTTTAG+GGG | + | chr1.1:25126488-25126507 | MS.gene57061:intron | 15.0% |
| !! | ATTATATCATAAAGTTAATG+GGG | - | chr1.1:25126784-25126803 | None:intergenic | 15.0% |
| !! | CAAAAAAGAATTATTACTAT+AGG | - | chr1.1:25128320-25128339 | None:intergenic | 15.0% |
| !! | CAATTTATATAGAATAAAGA+CGG | - | chr1.1:25126367-25126386 | None:intergenic | 15.0% |
| !! | GATTTACAATAATAATAATC+AGG | - | chr1.1:25128696-25128715 | None:intergenic | 15.0% |
| !! | TATTGTAAATCAATTTAACT+TGG | + | chr1.1:25128705-25128724 | MS.gene57061:intron | 15.0% |
| !! | TGTATAATAATCCTTATATT+TGG | - | chr1.1:25125699-25125718 | None:intergenic | 15.0% |
| !!! | AAAAAATAACATATTTCTGT+TGG | + | chr1.1:25128183-25128202 | MS.gene57061:intron | 15.0% |
| !!! | CTTTTATTTTCATAACAATA+GGG | + | chr1.1:25127957-25127976 | MS.gene57061:intron | 15.0% |
| !!! | GTGTTTAAGATTTTAAATTT+TGG | + | chr1.1:25126275-25126294 | MS.gene57061:intron | 15.0% |
| !!! | TATTTTTTCGTATTTTATTG+CGG | + | chr1.1:25128214-25128233 | MS.gene57061:intron | 15.0% |
| !!! | TCCATTAAATAATAAGTTTT+TGG | + | chr1.1:25128565-25128584 | MS.gene57061:intron | 15.0% |
| !!! | TTGCTCTAATTTTAATAAAA+TGG | + | chr1.1:25127622-25127641 | MS.gene57061:intron | 15.0% |
| !!! | TTTTCAAAAACAAAACAAAA+TGG | + | chr1.1:25126446-25126465 | MS.gene57061:intron | 15.0% |
| !! | AACATATGTTCTATACAAAT+AGG | - | chr1.1:25128446-25128465 | None:intergenic | 20.0% |
| !! | AACATTCAACTATGAAATAA+AGG | - | chr1.1:25126337-25126356 | None:intergenic | 20.0% |
| !! | ATTTGTATAGAACATATGTT+GGG | + | chr1.1:25128446-25128465 | MS.gene57061:intron | 20.0% |
| !! | CAATCACATTTAATAATACT+AGG | - | chr1.1:25125934-25125953 | None:intergenic | 20.0% |
| !! | CCTATTGTTATGAAAATAAA+AGG | - | chr1.1:25127959-25127978 | None:intergenic | 20.0% |
| !! | CGTCTTTATTCTATATAAAT+TGG | + | chr1.1:25126365-25126384 | MS.gene57061:intron | 20.0% |
| !! | GCCAAAAACTTATTATTTAA+TGG | - | chr1.1:25128569-25128588 | None:intergenic | 20.0% |
| !! | GTTTAACACTTATCATTTAA+GGG | - | chr1.1:25128482-25128501 | None:intergenic | 20.0% |
| !! | TAAAAAAATTAACAAATGGG+TGG | + | chr1.1:25126005-25126024 | MS.gene57061:intron | 20.0% |
| !! | TATTTGTATAGAACATATGT+TGG | + | chr1.1:25128445-25128464 | MS.gene57061:intron | 20.0% |
| !! | TGTTTAACACTTATCATTTA+AGG | - | chr1.1:25128483-25128502 | None:intergenic | 20.0% |
| !!! | AACCAAATGTGTTTTTTTTT+TGG | - | chr1.1:25128619-25128638 | None:intergenic | 20.0% |
| !!! | ACCAAATGTGTTTTTTTTTT+GGG | - | chr1.1:25128618-25128637 | None:intergenic | 20.0% |
| !!! | AGTAGAATACGTTTTTATTT+TGG | + | chr1.1:25126143-25126162 | MS.gene57061:intron | 20.0% |
| !!! | ATTTTTGTGATTTCAGAATT+AGG | + | chr1.1:25127131-25127150 | MS.gene57061:intron | 20.0% |
| !!! | CCTTTTATTTTCATAACAAT+AGG | + | chr1.1:25127956-25127975 | MS.gene57061:intron | 20.0% |
| !!! | GTAAACACTAGTAATAATTT+TGG | + | chr1.1:25127510-25127529 | MS.gene57061:intron | 20.0% |
| !!! | TGATATTCTAAAGTTATCTT+TGG | + | chr1.1:25125271-25125290 | MS.gene57061:intron | 20.0% |
| !!! | TTTTTGTGATTTCAGAATTA+GGG | + | chr1.1:25127132-25127151 | MS.gene57061:intron | 20.0% |
| ! | AAGGAATTATTGCATAAAGA+CGG | - | chr1.1:25127836-25127855 | None:intergenic | 25.0% |
| ! | AATAACTTACTAGCAACAAT+TGG | - | chr1.1:25127245-25127264 | None:intergenic | 25.0% |
| ! | ACCCAAAAAAAAAACACATT+TGG | + | chr1.1:25128614-25128633 | MS.gene57061:intron | 25.0% |
| ! | AGACTTGCAAAATTGAAAAT+AGG | + | chr1.1:25124905-25124924 | MS.gene57061:CDS | 25.0% |
| ! | AGTTTCATAAATTCCCTTAA+AGG | + | chr1.1:25124988-25125007 | MS.gene57061:CDS | 25.0% |
| ! | ATAAGAAGAAGAAAGAACAA+TGG | + | chr1.1:25126917-25126936 | MS.gene57061:intron | 25.0% |
| ! | CAATAACATAATTTGAGAAG+AGG | + | chr1.1:25126875-25126894 | MS.gene57061:intron | 25.0% |
| ! | CTATTAGTTAGAGATATCAT+GGG | + | chr1.1:25128588-25128607 | MS.gene57061:intron | 25.0% |
| ! | GTTAGTTAGTTAGTTAGTTA+CGG | - | chr1.1:25127037-25127056 | None:intergenic | 25.0% |
| ! | TAACACATCTACAAAAAACA+AGG | - | chr1.1:25127855-25127874 | None:intergenic | 25.0% |
| ! | TAATCGCAAACAAAACATAT+CGG | - | chr1.1:25126193-25126212 | None:intergenic | 25.0% |
| ! | TACTAAATCATGATATACAG+TGG | - | chr1.1:25126127-25126146 | None:intergenic | 25.0% |
| ! | TCAAAAACAAAACAAAATGG+TGG | + | chr1.1:25126449-25126468 | MS.gene57061:intron | 25.0% |
| ! | TCCTTATATTTGGTATCTAT+CGG | - | chr1.1:25125689-25125708 | None:intergenic | 25.0% |
| ! | TCTCAATCTTTCATATCAAA+AGG | + | chr1.1:25126216-25126235 | MS.gene57061:intron | 25.0% |
| ! | TGAAGAAATTAATGACAAGA+TGG | + | chr1.1:25125403-25125422 | MS.gene57061:intron | 25.0% |
| ! | TGCTTAAGAAACTCAATTAT+AGG | - | chr1.1:25128391-25128410 | None:intergenic | 25.0% |
| ! | TTAAAGATAAAGTCTGTCAA+AGG | - | chr1.1:25125308-25125327 | None:intergenic | 25.0% |
| ! | TTAGTTAGTTAGTTAGTTAC+GGG | - | chr1.1:25127036-25127055 | None:intergenic | 25.0% |
| ! | TTTAAAAAGGAACAGTTTGT+TGG | + | chr1.1:25125323-25125342 | MS.gene57061:intron | 25.0% |
| !! | ATTTTCATAACAATAGGGAT+AGG | + | chr1.1:25127962-25127981 | MS.gene57061:intron | 25.0% |
| !! | GACAGACTTTATCTTTAAAA+AGG | + | chr1.1:25125310-25125329 | MS.gene57061:intron | 25.0% |
| !! | TGATTTTGTCAAGTTATTAG+TGG | - | chr1.1:25128061-25128080 | None:intergenic | 25.0% |
| !! | TTCAATCTGAAGTATATTAG+AGG | + | chr1.1:25127903-25127922 | MS.gene57061:intron | 25.0% |
| !!! | TGATTGTTTTTCTACCAATA+GGG | + | chr1.1:25125948-25125967 | MS.gene57061:intron | 25.0% |
| AAATAATATTTGAAGGGTCG+TGG | + | chr1.1:25126847-25126866 | MS.gene57061:intron | 30.0% | |
| AACTACATCATTAGTGTCTA+AGG | + | chr1.1:25128656-25128675 | MS.gene57061:intron | 30.0% | |
| AAGTGTTAAACATGCTGTTA+GGG | + | chr1.1:25128491-25128510 | MS.gene57061:intron | 30.0% | |
| AATAATATTTGAAGGGTCGT+GGG | + | chr1.1:25126848-25126867 | MS.gene57061:intron | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr1.1:25126590-25126609 | None:intergenic | 30.0% | |
| ACTATAGGCAAACATAAACT+AGG | - | chr1.1:25128305-25128324 | None:intergenic | 30.0% | |
| AGAAGAGGCAAATAAGATTT+GGG | + | chr1.1:25126890-25126909 | MS.gene57061:intron | 30.0% | |
| AGTTCAAATTGCATAGGAAT+CGG | - | chr1.1:25125650-25125669 | None:intergenic | 30.0% | |
| ATAAGAGAACATGCATAACA+TGG | + | chr1.1:25128351-25128370 | MS.gene57061:intron | 30.0% | |
| ATATGTCCTTCAGTAAAAAC+AGG | - | chr1.1:25128530-25128549 | None:intergenic | 30.0% | |
| CTCTTTCTTGCTGATATTAA+CGG | - | chr1.1:25125157-25125176 | None:intergenic | 30.0% | |
| CTTAAAGGAATTGAAGAAAG+CGG | + | chr1.1:25125003-25125022 | MS.gene57061:CDS | 30.0% | |
| CTTTGTCTTATGGTTTGAAA+AGG | - | chr1.1:25128806-25128825 | None:intergenic | 30.0% | |
| GATGTTTGTGATTCAAATCT+TGG | + | chr1.1:25126101-25126120 | MS.gene57061:intron | 30.0% | |
| GCTATTAGTTAGAGATATCA+TGG | + | chr1.1:25128587-25128606 | MS.gene57061:intron | 30.0% | |
| GCTTTCTTCAATTCCTTTAA+GGG | - | chr1.1:25125004-25125023 | None:intergenic | 30.0% | |
| GTTTGAAAAGGATACTTTGT+TGG | - | chr1.1:25128794-25128813 | None:intergenic | 30.0% | |
| TAAGTGTTAAACATGCTGTT+AGG | + | chr1.1:25128490-25128509 | MS.gene57061:intron | 30.0% | |
| TAGACACTAATGATGTAGTT+TGG | - | chr1.1:25128656-25128675 | None:intergenic | 30.0% | |
| TAGTTAGTTAGTTAGTTACG+GGG | - | chr1.1:25127035-25127054 | None:intergenic | 30.0% | |
| TCAGAGACTAAATTGACTAA+CGG | - | chr1.1:25126637-25126656 | None:intergenic | 30.0% | |
| TCTTTCTAGATACGAAACAA+CGG | - | chr1.1:25125831-25125850 | None:intergenic | 30.0% | |
| TTAAATCTTTGTCAGAAGCA+TGG | + | chr1.1:25125099-25125118 | MS.gene57061:CDS | 30.0% | |
| TTCATGAGTTCAAATTGCAT+AGG | - | chr1.1:25125656-25125675 | None:intergenic | 30.0% | |
| TTCGTATCTAGAAAGAATGA+AGG | + | chr1.1:25125835-25125854 | MS.gene57061:intron | 30.0% | |
| TTGAAAACCATAGAGAAGAA+TGG | + | chr1.1:25128913-25128932 | MS.gene57061:CDS | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr1.1:25126561-25126580 | None:intergenic | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr1.1:25126711-25126730 | MS.gene57061:intron | 30.0% | |
| TTGTATATCGCAATCAGATA+AGG | - | chr1.1:25127407-25127426 | None:intergenic | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr1.1:25126562-25126581 | None:intergenic | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr1.1:25126710-25126729 | MS.gene57061:intron | 30.0% | |
| ! | CGATATTCAATTTGAGTTTC+CGG | - | chr1.1:25124846-25124865 | None:intergenic | 30.0% |
| ! | TCAGAGTGAATATCGATTAT+TGG | - | chr1.1:25127272-25127291 | None:intergenic | 30.0% |
| ! | TCTGAAGTATATTAGAGGAT+AGG | + | chr1.1:25127908-25127927 | MS.gene57061:intron | 30.0% |
| ! | TGAACAAATTCTGTTTCTTG+AGG | + | chr1.1:25125454-25125473 | MS.gene57061:intron | 30.0% |
| !! | CAATTTAACTTGGTGTACTT+TGG | + | chr1.1:25128715-25128734 | MS.gene57061:intron | 30.0% |
| !! | GTGATTGTTTTTCTACCAAT+AGG | + | chr1.1:25125947-25125966 | MS.gene57061:intron | 30.0% |
| !!! | AGGAAAGAGTTTTAACTATG+AGG | + | chr1.1:25126236-25126255 | MS.gene57061:intron | 30.0% |
| !!! | ATAAGACCTGTTTTTACTGA+AGG | + | chr1.1:25128521-25128540 | MS.gene57061:intron | 30.0% |
| AAAGCTTCGTTTGTCAACTA+AGG | + | chr1.1:25128888-25128907 | MS.gene57061:CDS | 35.0% | |
| ACTTGATGCAGTTGCAAAAA+AGG | + | chr1.1:25128936-25128955 | MS.gene57061:CDS | 35.0% | |
| AGAAGAAGAAAGAACAATGG+CGG | + | chr1.1:25126920-25126939 | MS.gene57061:intron | 35.0% | |
| AGGCAAACATAAACTAGGAA+GGG | - | chr1.1:25128300-25128319 | None:intergenic | 35.0% | |
| ATCAAGTCCATTCTTCTCTA+TGG | - | chr1.1:25128923-25128942 | None:intergenic | 35.0% | |
| ATGCTTCACTATTCACTTAC+AGG | - | chr1.1:25128001-25128020 | None:intergenic | 35.0% | |
| CATAACAATAGGGATAGGAA+AGG | + | chr1.1:25127967-25127986 | MS.gene57061:intron | 35.0% | |
| CCATAGTAAGCTATTAAGCA+CGG | - | chr1.1:25128142-25128161 | None:intergenic | 35.0% | |
| CGCTTTCTTCAATTCCTTTA+AGG | - | chr1.1:25125005-25125024 | None:intergenic | 35.0% | |
| CGTTAATATCAGCAAGAAAG+AGG | + | chr1.1:25125155-25125174 | MS.gene57061:CDS | 35.0% | |
| CTAGCAACAATTGGTTGAAA+AGG | - | chr1.1:25127236-25127255 | None:intergenic | 35.0% | |
| CTTTAATGATGTGGAGGAAA+GGG | + | chr1.1:25125862-25125881 | MS.gene57061:intron | 35.0% | |
| CTTTCCTCCACATCATTAAA+GGG | - | chr1.1:25125863-25125882 | None:intergenic | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | chr1.1:25126591-25126610 | None:intergenic | 35.0% | |
| GAGAAGAGGCAAATAAGATT+TGG | + | chr1.1:25126889-25126908 | MS.gene57061:intron | 35.0% | |
| GAGACAGAGAGAATAATCAA+CGG | - | chr1.1:25125217-25125236 | None:intergenic | 35.0% | |
| GCCGATAGATACCAAATATA+AGG | + | chr1.1:25125685-25125704 | MS.gene57061:intron | 35.0% | |
| GTAATTTAGACCCAAGAAAC+CGG | + | chr1.1:25125345-25125364 | MS.gene57061:intron | 35.0% | |
| TAGGCAAACATAAACTAGGA+AGG | - | chr1.1:25128301-25128320 | None:intergenic | 35.0% | |
| TGAAAAGGAGAAGCAACAAT+TGG | - | chr1.1:25127221-25127240 | None:intergenic | 35.0% | |
| TGACATATCCTCCAGAAATA+GGG | - | chr1.1:25125748-25125767 | None:intergenic | 35.0% | |
| TGGTATCTATCGGCAATATT+TGG | - | chr1.1:25125679-25125698 | None:intergenic | 35.0% | |
| TGTAAGTGAATAGTGAAGCA+TGG | + | chr1.1:25128000-25128019 | MS.gene57061:intron | 35.0% | |
| TGTCAAGTTATTAGTGGTGT+CGG | - | chr1.1:25128055-25128074 | None:intergenic | 35.0% | |
| TTCTGACGATCTTTATGTCT+TGG | + | chr1.1:25125056-25125075 | MS.gene57061:CDS | 35.0% | |
| TTCTTGAGTTCTCAGTTAAG+TGG | + | chr1.1:25127155-25127174 | MS.gene57061:CDS | 35.0% | |
| TTGACATATCCTCCAGAAAT+AGG | - | chr1.1:25125749-25125768 | None:intergenic | 35.0% | |
| TTTCCTCCACATCATTAAAG+GGG | - | chr1.1:25125862-25125881 | None:intergenic | 35.0% | |
| ! | ATTTCTGGAGGATATGTCAA+AGG | + | chr1.1:25125749-25125768 | MS.gene57061:intron | 35.0% |
| ! | CTACATACTTTGTTTCTTGC+AGG | + | chr1.1:25127734-25127753 | MS.gene57061:intron | 35.0% |
| ! | TTTGATTTCTTTCCGGTGAA+GGG | - | chr1.1:25128766-25128785 | None:intergenic | 35.0% |
| !! | TTGTTTTTCTACCAATAGGG+TGG | + | chr1.1:25125951-25125970 | MS.gene57061:intron | 35.0% |
| !!! | GTTTTAACTATGAGGTGTTG+TGG | + | chr1.1:25126244-25126263 | MS.gene57061:intron | 35.0% |
| AAAGGGTCATCAGAATTGGT+AGG | + | chr1.1:25125879-25125898 | MS.gene57061:intron | 40.0% | |
| AATTATATGTGTCCGACACC+GGG | + | chr1.1:25128094-25128113 | MS.gene57061:intron | 40.0% | |
| ACAACGGCAATAGATGACAA+TGG | - | chr1.1:25125815-25125834 | None:intergenic | 40.0% | |
| AGAACATGCATAACATGGTG+TGG | + | chr1.1:25128356-25128375 | MS.gene57061:intron | 40.0% | |
| ATATACAACACTCCTCCCAA+GGG | - | chr1.1:25125524-25125543 | None:intergenic | 40.0% | |
| CAATTATATGTGTCCGACAC+CGG | + | chr1.1:25128093-25128112 | MS.gene57061:intron | 40.0% | |
| CACCGGAAAGAAATCAAACA+GGG | + | chr1.1:25128768-25128787 | MS.gene57061:CDS | 40.0% | |
| CATCAGAATTGGTAGGAAAG+AGG | + | chr1.1:25125886-25125905 | MS.gene57061:intron | 40.0% | |
| CATGTCATTGTCAGTTACCA+TGG | - | chr1.1:25127491-25127510 | None:intergenic | 40.0% | |
| CCGTGCTTAATAGCTTACTA+TGG | + | chr1.1:25128139-25128158 | MS.gene57061:intron | 40.0% | |
| CCTTTAATGATGTGGAGGAA+AGG | + | chr1.1:25125861-25125880 | MS.gene57061:intron | 40.0% | |
| CCTTTCCTCCACATCATTAA+AGG | - | chr1.1:25125864-25125883 | None:intergenic | 40.0% | |
| CTGATACGTGTTAGAGACAA+CGG | + | chr1.1:25127684-25127703 | MS.gene57061:intron | 40.0% | |
| GAAGAAGAAAGAACAATGGC+GGG | + | chr1.1:25126921-25126940 | MS.gene57061:intron | 40.0% | |
| GAATTGGTAGGAAAGAGGTA+AGG | + | chr1.1:25125891-25125910 | MS.gene57061:intron | 40.0% | |
| GACATATCCTCCAGAAATAG+GGG | - | chr1.1:25125747-25125766 | None:intergenic | 40.0% | |
| GAGGCAAATAAGATTTGGGT+TGG | + | chr1.1:25126894-25126913 | MS.gene57061:intron | 40.0% | |
| GATCCTAAATCCCCTATTTC+TGG | + | chr1.1:25125734-25125753 | MS.gene57061:intron | 40.0% | |
| TATGTCTTGGCGAATGAAGT+TGG | + | chr1.1:25125069-25125088 | MS.gene57061:CDS | 40.0% | |
| TCAAATTGCATAGGAATCGG+TGG | - | chr1.1:25125647-25125666 | None:intergenic | 40.0% | |
| TCACCGGAAAGAAATCAAAC+AGG | + | chr1.1:25128767-25128786 | MS.gene57061:CDS | 40.0% | |
| TCTGTCACGATGAAGGTTAT+CGG | - | chr1.1:25125776-25125795 | None:intergenic | 40.0% | |
| TGATACGTGTTAGAGACAAC+GGG | + | chr1.1:25127685-25127704 | MS.gene57061:intron | 40.0% | |
| ! | AAAATTCCGACCGGTTTCTT+GGG | - | chr1.1:25125358-25125377 | None:intergenic | 40.0% |
| ! | AAGCATGACTGAGTTGAGTT+CGG | + | chr1.1:25125589-25125608 | MS.gene57061:intron | 40.0% |
| ! | AGGTATTGTGTGAGCTTCTT+CGG | + | chr1.1:25124925-25124944 | MS.gene57061:CDS | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr1.1:25126515-25126534 | MS.gene57061:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr1.1:25126534-25126515 | None:intergenic | 40.0% |
| ! | AGTTTTCTAACCTTCCCCTT+GGG | + | chr1.1:25125506-25125525 | MS.gene57061:intron | 40.0% |
| ! | GTTTGATTTCTTTCCGGTGA+AGG | - | chr1.1:25128767-25128786 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr1.1:25126514-25126533 | MS.gene57061:intron | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr1.1:25126533-25126514 | None:intergenic | 40.0% |
| ! | TAGTTTTCTAACCTTCCCCT+TGG | + | chr1.1:25125505-25125524 | MS.gene57061:intron | 40.0% |
| ! | TCGTATTTTATTGCGGACAG+AGG | + | chr1.1:25128221-25128240 | MS.gene57061:intron | 40.0% |
| ! | TTTTCTACCAATAGGGTGGT+TGG | + | chr1.1:25125955-25125974 | MS.gene57061:intron | 40.0% |
| !! | GGAGTGTTGTATATGCTTCA+AGG | + | chr1.1:25125530-25125549 | MS.gene57061:intron | 40.0% |
| AAGTGTTCCAACCACCCTAT+TGG | - | chr1.1:25125965-25125984 | None:intergenic | 45.0% | |
| AATATTTGAAGGGTCGTGGG+TGG | + | chr1.1:25126851-25126870 | MS.gene57061:intron | 45.0% | |
| ACCAAACTCTCTTGTACTGG+AGG | - | chr1.1:25128846-25128865 | None:intergenic | 45.0% | |
| ACCTCCAGTACAAGAGAGTT+TGG | + | chr1.1:25128842-25128861 | MS.gene57061:CDS | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr1.1:25126622-25126641 | None:intergenic | 45.0% | |
| AGGAGAAGCAACAATTGGTG+AGG | - | chr1.1:25127216-25127235 | None:intergenic | 45.0% | |
| CACAAGTCAGTGTCAAACAC+AGG | - | chr1.1:25127571-25127590 | None:intergenic | 45.0% | |
| CATATACAACACTCCTCCCA+AGG | - | chr1.1:25125525-25125544 | None:intergenic | 45.0% | |
| CCAGTACAAGAGAGTTTGGT+GGG | + | chr1.1:25128846-25128865 | MS.gene57061:CDS | 45.0% | |
| CCTCCAGAAATAGGGGATTT+AGG | - | chr1.1:25125740-25125759 | None:intergenic | 45.0% | |
| CTCGAATCCAAAATTCCGAC+CGG | - | chr1.1:25125367-25125386 | None:intergenic | 45.0% | |
| GAAGGTCCCCTTTAATGATG+TGG | + | chr1.1:25125853-25125872 | MS.gene57061:intron | 45.0% | |
| GAATAGTGAAGCATGGACAC+CGG | + | chr1.1:25128007-25128026 | MS.gene57061:intron | 45.0% | |
| GACAAATCGTTCCCCATTCA+GGG | + | chr1.1:25126742-25126761 | MS.gene57061:intron | 45.0% | |
| GAGGAAAGGGTCATCAGAAT+TGG | + | chr1.1:25125875-25125894 | MS.gene57061:intron | 45.0% | |
| GATGAATCGTTCCCCATTCA+GGG | - | chr1.1:25126530-25126549 | None:intergenic | 45.0% | |
| GATGCAGTTGCAAAAAAGGC+TGG | + | chr1.1:25128940-25128959 | MS.gene57061:CDS | 45.0% | |
| GGAGAAGCAACAATTGGTGA+GGG | - | chr1.1:25127215-25127234 | None:intergenic | 45.0% | |
| GGTATTGTGTGAGCTTCTTC+GGG | + | chr1.1:25124926-25124945 | MS.gene57061:CDS | 45.0% | |
| GTCACTCAAACGATGAAAGC+TGG | - | chr1.1:25128268-25128287 | None:intergenic | 45.0% | |
| TATACAACACTCCTCCCAAG+GGG | - | chr1.1:25125523-25125542 | None:intergenic | 45.0% | |
| TATGCAAAACAGTCCCTGCA+TGG | - | chr1.1:25126698-25126717 | None:intergenic | 45.0% | |
| TATTAAGCACGGACACTCCT+AGG | - | chr1.1:25128131-25128150 | None:intergenic | 45.0% | |
| TCCAGTACAAGAGAGTTTGG+TGG | + | chr1.1:25128845-25128864 | MS.gene57061:CDS | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr1.1:25126682-25126701 | MS.gene57061:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr1.1:25126686-25126705 | None:intergenic | 45.0% | |
| TGAAGAGGGTTTGTGAGAGT+TGG | - | chr1.1:25127006-25127025 | None:intergenic | 45.0% | |
| TGACAAATCGTTCCCCATTC+AGG | + | chr1.1:25126741-25126760 | MS.gene57061:intron | 45.0% | |
| TGATGAATCGTTCCCCATTC+AGG | - | chr1.1:25126531-25126550 | None:intergenic | 45.0% | |
| TTACGGGGTGAGAATGAAGA+GGG | - | chr1.1:25127020-25127039 | None:intergenic | 45.0% | |
| TTGCAGTGGTAGTACCTCAA+CGG | - | chr1.1:25124880-25124899 | None:intergenic | 45.0% | |
| TTTAGACCCAAGAAACCGGT+CGG | + | chr1.1:25125349-25125368 | MS.gene57061:intron | 45.0% | |
| ! | CAAAATTCCGACCGGTTTCT+TGG | - | chr1.1:25125359-25125378 | None:intergenic | 45.0% |
| ! | CAAGAAACCGGTCGGAATTT+TGG | + | chr1.1:25125357-25125376 | MS.gene57061:intron | 45.0% |
| ! | CTGTTGCTAGTTTACGTCCA+TGG | + | chr1.1:25127471-25127490 | MS.gene57061:intron | 45.0% |
| ! | GGCCCTGTTTGATTTCTTTC+CGG | - | chr1.1:25128773-25128792 | None:intergenic | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr1.1:25126516-25126535 | MS.gene57061:intron | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+GGG | - | chr1.1:25126535-25126516 | None:intergenic | 45.0% |
| ! | GTCGGAATTTTGGATTCGAG+AGG | + | chr1.1:25125367-25125386 | MS.gene57061:intron | 45.0% |
| !! | AGATGGTCGTGAAAGTACTG+AGG | + | chr1.1:25125420-25125439 | MS.gene57061:intron | 45.0% |
| !! | CCTAAATCCCCTATTTCTGG+AGG | + | chr1.1:25125737-25125756 | MS.gene57061:intron | 45.0% |
| !! | TATTAAAAAAATTAACAAAT+GGG | + | chr1.1:25126002-25126021 | MS.gene57061:intron | 5.0% |
| !! | TTATTAAAAAAATTAACAAA+TGG | + | chr1.1:25126001-25126020 | MS.gene57061:intron | 5.0% |
| !!! | AATTTTTTTAATAAATTCAA+TGG | - | chr1.1:25125995-25126014 | None:intergenic | 5.0% |
| !!! | TTAATTTTTTTTATTTTTTG+AGG | - | chr1.1:25126824-25126843 | None:intergenic | 5.0% |
| CATGTCGTCTGTCACGATGA+AGG | - | chr1.1:25125783-25125802 | None:intergenic | 50.0% | |
| CCCACCAAACTCTCTTGTAC+TGG | - | chr1.1:25128849-25128868 | None:intergenic | 50.0% | |
| CTTCATCGTGACAGACGACA+TGG | + | chr1.1:25125781-25125800 | MS.gene57061:intron | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr1.1:25126623-25126642 | None:intergenic | 50.0% | |
| GGTCCCCTTTAATGATGTGG+AGG | + | chr1.1:25125856-25125875 | MS.gene57061:intron | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr1.1:25126681-25126700 | MS.gene57061:intron | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr1.1:25126687-25126706 | None:intergenic | 50.0% | |
| GTGGTCTCAGAATCTCGTCT+CGG | + | chr1.1:25127174-25127193 | MS.gene57061:CDS | 50.0% | |
| GTTACGGGGTGAGAATGAAG+AGG | - | chr1.1:25127021-25127040 | None:intergenic | 50.0% | |
| TCGATGAATCAGAGCCGTTG+AGG | + | chr1.1:25124863-25124882 | MS.gene57061:CDS | 50.0% | |
| TTTCTAACCTTCCCCTTGGG+AGG | + | chr1.1:25125509-25125528 | MS.gene57061:intron | 50.0% | |
| ! | AAGAGAGTTTGGTGGGAAGC+TGG | + | chr1.1:25128853-25128872 | MS.gene57061:CDS | 50.0% |
| ! | AGAGAGTTTGGTGGGAAGCT+GGG | + | chr1.1:25128854-25128873 | MS.gene57061:CDS | 50.0% |
| ! | GTTGAGGTACTACCACTGCA+AGG | + | chr1.1:25124879-25124898 | MS.gene57061:CDS | 50.0% |
| ! | TGCAAGTCTTGTCCTTGCAG+TGG | - | chr1.1:25124894-25124913 | None:intergenic | 50.0% |
| GCACGGACACTCCTAGGATT+AGG | - | chr1.1:25128125-25128144 | None:intergenic | 55.0% | |
| GCGCATAGAAGCGAAGACGA+AGG | - | chr1.1:25126970-25126989 | None:intergenic | 55.0% | |
| GCGGGTTCTGCAGTATCACT+TGG | + | chr1.1:25126939-25126958 | MS.gene57061:intron | 55.0% | |
| GTTAGTGTCCGTGTCGTGTC+CGG | - | chr1.1:25128029-25128048 | None:intergenic | 55.0% | |
| TCCTAGGATTAGGCGTGTCC+CGG | - | chr1.1:25128115-25128134 | None:intergenic | 55.0% | |
| ! | GAGAGAGTGTGTCCCTTCAC+CGG | + | chr1.1:25128751-25128770 | MS.gene57061:intron | 55.0% |
| ACCGGGACACGCCTAATCCT+AGG | + | chr1.1:25128111-25128130 | MS.gene57061:intron | 60.0% | |
| CAACACTCCTCCCAAGGGGA+AGG | - | chr1.1:25125519-25125538 | None:intergenic | 60.0% | |
| CATGGACACCGGACACGACA+CGG | + | chr1.1:25128018-25128037 | MS.gene57061:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr1.1:25128109-25128128 | None:intergenic | 60.0% | |
| GCTTTGACGCGCAGGCTGTG+TGG | + | chr1.1:25127439-25127458 | MS.gene57061:intron | 65.0% | |
| CGCGCAGGCTGTGTGGAGCA+CGG | + | chr1.1:25127446-25127465 | MS.gene57061:intron | 70.0% | |
| CTGTGCGCGCTTTGACGCGC+AGG | + | chr1.1:25127431-25127450 | MS.gene57061:intron | 70.0% | |
| GCGCAGGCTGTGTGGAGCAC+GGG | + | chr1.1:25127447-25127466 | MS.gene57061:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 25124829 | 25128973 | 25124829 | ID=MS.gene57061 |
| chr1.1 | mRNA | 25124829 | 25128973 | 25124829 | ID=MS.gene57061.t1;Parent=MS.gene57061 |
| chr1.1 | exon | 25124829 | 25125189 | 25124829 | ID=MS.gene57061.t1.exon1;Parent=MS.gene57061.t1 |
| chr1.1 | CDS | 25124829 | 25125189 | 25124829 | ID=cds.MS.gene57061.t1;Parent=MS.gene57061.t1 |
| chr1.1 | exon | 25127147 | 25127254 | 25127147 | ID=MS.gene57061.t1.exon2;Parent=MS.gene57061.t1 |
| chr1.1 | CDS | 25127147 | 25127254 | 25127147 | ID=cds.MS.gene57061.t1;Parent=MS.gene57061.t1 |
| chr1.1 | exon | 25128752 | 25128973 | 25128752 | ID=MS.gene57061.t1.exon3;Parent=MS.gene57061.t1 |
| chr1.1 | CDS | 25128752 | 25128973 | 25128752 | ID=cds.MS.gene57061.t1;Parent=MS.gene57061.t1 |
| Gene Sequence |
| Protein sequence |
