AlfalfaGEDB | MS.gene59353

M. sativa cultivar XinJiangDaYe / MS.gene59353

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59353.t1	XP_003611973.1	98.4	126	2	0	1	126	43	168	4.90E-33	150.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59353.t1	G7ZW21	98.4	126	2	0	1	126	43	168	3.5e-33	150.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene59353	0.872588	2.83E-67	-1.69E-46
MS.gene049217	MS.gene59353	0.835924	1.26E-56	-1.69E-46
MS.gene049285	MS.gene59353	0.810376	1.19E-50	-1.69E-46
MS.gene049320	MS.gene59353	0.815041	1.13E-51	-1.69E-46
MS.gene049351	MS.gene59353	0.821736	3.45E-53	-1.69E-46
MS.gene049427	MS.gene59353	0.841141	5.69E-58	-1.69E-46
MS.gene049609	MS.gene59353	0.850894	1.26E-60	-1.69E-46
MS.gene049661	MS.gene59353	0.864999	8.11E-65	-1.69E-46
MS.gene049662	MS.gene59353	0.85255	4.29E-61	-1.69E-46
MS.gene049760	MS.gene59353	0.816259	6.07E-52	-1.69E-46
MS.gene049805	MS.gene59353	0.860577	1.87E-63	-1.69E-46
MS.gene050076	MS.gene59353	0.88719	1.77E-72	-1.69E-46
MS.gene050163	MS.gene59353	0.829935	3.90E-55	-1.69E-46
MS.gene050397	MS.gene59353	0.822175	2.73E-53	-1.69E-46
MS.gene050404	MS.gene59353	0.808282	3.34E-50	-1.69E-46
MS.gene050406	MS.gene59353	0.822683	2.08E-53	-1.69E-46
MS.gene050432	MS.gene59353	0.837474	5.09E-57	-1.69E-46
MS.gene050464	MS.gene59353	0.804969	1.67E-49	-1.69E-46
MS.gene050475	MS.gene59353	-0.80527	1.45E-49	-1.69E-46
MS.gene050529	MS.gene59353	0.823179	1.59E-53	-1.69E-46
MS.gene050541	MS.gene59353	-0.80542	1.35E-49	-1.69E-46
MS.gene050593	MS.gene59353	0.823282	1.51E-53	-1.69E-46
MS.gene050670	MS.gene59353	0.831052	2.08E-55	-1.69E-46
MS.gene050699	MS.gene59353	0.815167	1.06E-51	-1.69E-46
MS.gene050767	MS.gene59353	0.868285	7.31E-66	-1.69E-46
MS.gene050770	MS.gene59353	0.870911	1.02E-66	-1.69E-46
MS.gene050772	MS.gene59353	0.840457	8.59E-58	-1.69E-46
MS.gene050781	MS.gene59353	0.812313	4.51E-51	-1.69E-46
MS.gene050783	MS.gene59353	0.837585	4.76E-57	-1.69E-46
MS.gene05100	MS.gene59353	0.828634	8.06E-55	-1.69E-46
MS.gene05101	MS.gene59353	0.854984	8.55E-62	-1.69E-46
MS.gene05105	MS.gene59353	0.86705	1.82E-65	-1.69E-46
MS.gene051228	MS.gene59353	0.801187	1.01E-48	-1.69E-46
MS.gene051387	MS.gene59353	0.8111	8.29E-51	-1.69E-46
MS.gene051471	MS.gene59353	0.81851	1.89E-52	-1.69E-46
MS.gene051582	MS.gene59353	0.81825	2.16E-52	-1.69E-46
MS.gene051666	MS.gene59353	0.84717	1.37E-59	-1.69E-46
MS.gene051692	MS.gene59353	0.813784	2.15E-51	-1.69E-46
MS.gene051694	MS.gene59353	0.804944	1.69E-49	-1.69E-46
MS.gene051810	MS.gene59353	0.81776	2.79E-52	-1.69E-46
MS.gene051858	MS.gene59353	0.821439	4.04E-53	-1.69E-46
MS.gene051877	MS.gene59353	0.843349	1.48E-58	-1.69E-46
MS.gene052078	MS.gene59353	0.849547	3.02E-60	-1.69E-46
MS.gene052253	MS.gene59353	0.806798	6.91E-50	-1.69E-46
MS.gene052271	MS.gene59353	0.839286	1.74E-57	-1.69E-46
MS.gene052290	MS.gene59353	0.846543	2.03E-59	-1.69E-46
MS.gene052310	MS.gene59353	0.852982	3.23E-61	-1.69E-46
MS.gene052322	MS.gene59353	0.848954	4.41E-60	-1.69E-46
MS.gene052326	MS.gene59353	0.823766	1.16E-53	-1.69E-46
MS.gene052379	MS.gene59353	0.834131	3.58E-56	-1.69E-46
MS.gene052421	MS.gene59353	0.849806	2.55E-60	-1.69E-46
MS.gene052481	MS.gene59353	0.83214	1.12E-55	-1.69E-46
MS.gene052484	MS.gene59353	0.825343	4.94E-54	-1.69E-46
MS.gene052485	MS.gene59353	0.80353	3.34E-49	-1.69E-46
MS.gene052501	MS.gene59353	0.822314	2.53E-53	-1.69E-46
MS.gene052505	MS.gene59353	0.824439	8.07E-54	-1.69E-46
MS.gene052615	MS.gene59353	0.828584	8.29E-55	-1.69E-46
MS.gene052982	MS.gene59353	0.80261	5.17E-49	-1.69E-46
MS.gene053009	MS.gene59353	0.83646	9.24E-57	-1.69E-46
MS.gene053103	MS.gene59353	0.839983	1.14E-57	-1.69E-46
MS.gene053104	MS.gene59353	0.831176	1.94E-55	-1.69E-46
MS.gene053207	MS.gene59353	0.829613	4.67E-55	-1.69E-46
MS.gene053209	MS.gene59353	0.818962	1.49E-52	-1.69E-46
MS.gene053213	MS.gene59353	0.846471	2.13E-59	-1.69E-46
MS.gene053286	MS.gene59353	0.832191	1.09E-55	-1.69E-46
MS.gene053322	MS.gene59353	0.874433	6.78E-68	-1.69E-46
MS.gene053574	MS.gene59353	0.803009	4.28E-49	-1.69E-46
MS.gene053632	MS.gene59353	0.868248	7.52E-66	-1.69E-46
MS.gene053915	MS.gene59353	0.853362	2.51E-61	-1.69E-46
MS.gene053916	MS.gene59353	0.806631	7.49E-50	-1.69E-46
MS.gene054376	MS.gene59353	0.878165	3.50E-69	-1.69E-46
MS.gene054600	MS.gene59353	0.806575	7.69E-50	-1.69E-46
MS.gene054642	MS.gene59353	0.836374	9.71E-57	-1.69E-46
MS.gene054802	MS.gene59353	0.874417	6.86E-68	-1.69E-46
MS.gene054803	MS.gene59353	0.872382	3.32E-67	-1.69E-46
MS.gene054804	MS.gene59353	0.877932	4.23E-69	-1.69E-46
MS.gene054927	MS.gene59353	0.831412	1.69E-55	-1.69E-46
MS.gene05505	MS.gene59353	0.841647	4.18E-58	-1.69E-46
MS.gene055116	MS.gene59353	0.850158	2.03E-60	-1.69E-46
MS.gene055206	MS.gene59353	0.82224	2.63E-53	-1.69E-46
MS.gene055254	MS.gene59353	0.860531	1.94E-63	-1.69E-46
MS.gene055277	MS.gene59353	0.838367	3.00E-57	-1.69E-46
MS.gene055289	MS.gene59353	0.829058	6.36E-55	-1.69E-46
MS.gene055362	MS.gene59353	0.817734	2.83E-52	-1.69E-46
MS.gene055397	MS.gene59353	0.851549	8.25E-61	-1.69E-46
MS.gene055412	MS.gene59353	0.805523	1.28E-49	-1.69E-46
MS.gene055422	MS.gene59353	0.804248	2.37E-49	-1.69E-46
MS.gene055428	MS.gene59353	0.831359	1.75E-55	-1.69E-46
MS.gene055499	MS.gene59353	0.890907	6.44E-74	-1.69E-46
MS.gene055502	MS.gene59353	0.808807	2.58E-50	-1.69E-46
MS.gene055647	MS.gene59353	0.824604	7.38E-54	-1.69E-46
MS.gene055722	MS.gene59353	0.80562	1.22E-49	-1.69E-46
MS.gene05592	MS.gene59353	0.847765	9.40E-60	-1.69E-46
MS.gene05602	MS.gene59353	0.808963	2.39E-50	-1.69E-46
MS.gene056083	MS.gene59353	0.832217	1.07E-55	-1.69E-46
MS.gene056191	MS.gene59353	0.830192	3.37E-55	-1.69E-46
MS.gene056374	MS.gene59353	0.804189	2.43E-49	-1.69E-46
MS.gene056407	MS.gene59353	0.829126	6.13E-55	-1.69E-46
MS.gene056497	MS.gene59353	0.825037	5.83E-54	-1.69E-46
MS.gene056609	MS.gene59353	0.811312	7.46E-51	-1.69E-46
MS.gene056657	MS.gene59353	0.816583	5.13E-52	-1.69E-46
MS.gene056796	MS.gene59353	0.809234	2.09E-50	-1.69E-46
MS.gene057011	MS.gene59353	0.822835	1.91E-53	-1.69E-46
MS.gene05702	MS.gene59353	0.859478	4.02E-63	-1.69E-46
MS.gene057048	MS.gene59353	0.827112	1.87E-54	-1.69E-46
MS.gene057123	MS.gene59353	0.855856	4.76E-62	-1.69E-46
MS.gene057124	MS.gene59353	0.803471	3.43E-49	-1.69E-46
MS.gene057129	MS.gene59353	0.89012	1.31E-73	-1.69E-46
MS.gene057146	MS.gene59353	0.860856	1.54E-63	-1.69E-46
MS.gene057196	MS.gene59353	0.819615	1.06E-52	-1.69E-46
MS.gene057295	MS.gene59353	0.855365	6.63E-62	-1.69E-46
MS.gene057310	MS.gene59353	0.803034	4.23E-49	-1.69E-46
MS.gene05733	MS.gene59353	0.800979	1.12E-48	-1.69E-46
MS.gene057416	MS.gene59353	0.872199	3.82E-67	-1.69E-46
MS.gene057749	MS.gene59353	0.821566	3.77E-53	-1.69E-46
MS.gene057823	MS.gene59353	0.81886	1.57E-52	-1.69E-46
MS.gene058006	MS.gene59353	0.813005	3.19E-51	-1.69E-46
MS.gene058019	MS.gene59353	0.877724	5.00E-69	-1.69E-46
MS.gene058082	MS.gene59353	0.811237	7.74E-51	-1.69E-46
MS.gene058233	MS.gene59353	0.871012	9.45E-67	-1.69E-46
MS.gene058293	MS.gene59353	0.84163	4.23E-58	-1.69E-46
MS.gene058323	MS.gene59353	0.800823	1.20E-48	-1.69E-46
MS.gene058419	MS.gene59353	0.848621	5.45E-60	-1.69E-46
MS.gene058544	MS.gene59353	0.822206	2.68E-53	-1.69E-46
MS.gene058660	MS.gene59353	0.876625	1.20E-68	-1.69E-46
MS.gene058723	MS.gene59353	0.82779	1.29E-54	-1.69E-46
MS.gene058787	MS.gene59353	0.803844	2.87E-49	-1.69E-46
MS.gene05883	MS.gene59353	0.81689	4.38E-52	-1.69E-46
MS.gene058928	MS.gene59353	0.803368	3.60E-49	-1.69E-46
MS.gene059029	MS.gene59353	0.805235	1.47E-49	-1.69E-46
MS.gene059141	MS.gene59353	0.800722	1.26E-48	-1.69E-46
MS.gene05934	MS.gene59353	0.819375	1.20E-52	-1.69E-46
MS.gene059536	MS.gene59353	0.862479	4.92E-64	-1.69E-46
MS.gene059597	MS.gene59353	0.811561	6.58E-51	-1.69E-46
MS.gene059676	MS.gene59353	0.811641	6.32E-51	-1.69E-46
MS.gene059677	MS.gene59353	0.832593	8.65E-56	-1.69E-46
MS.gene059688	MS.gene59353	0.857679	1.38E-62	-1.69E-46
MS.gene059692	MS.gene59353	0.86187	7.57E-64	-1.69E-46
MS.gene059695	MS.gene59353	0.866529	2.67E-65	-1.69E-46
MS.gene059718	MS.gene59353	0.824035	1.00E-53	-1.69E-46
MS.gene059902	MS.gene59353	0.826586	2.50E-54	-1.69E-46
MS.gene059960	MS.gene59353	0.866329	3.09E-65	-1.69E-46
MS.gene06037	MS.gene59353	0.810197	1.30E-50	-1.69E-46
MS.gene060403	MS.gene59353	0.830883	2.29E-55	-1.69E-46
MS.gene060804	MS.gene59353	0.843905	1.05E-58	-1.69E-46
MS.gene060818	MS.gene59353	0.803618	3.20E-49	-1.69E-46
MS.gene060835	MS.gene59353	0.810639	1.04E-50	-1.69E-46
MS.gene06092	MS.gene59353	0.825759	3.93E-54	-1.69E-46
MS.gene061041	MS.gene59353	0.828697	7.78E-55	-1.69E-46
MS.gene061049	MS.gene59353	0.844865	5.80E-59	-1.69E-46
MS.gene061150	MS.gene59353	0.830836	2.35E-55	-1.69E-46
MS.gene061200	MS.gene59353	0.866565	2.60E-65	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59353.t1	MTR_5g019920	96.825	126	4	0	1	126	43	168	1.86e-83	241

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59353.t1	AT3G50685	77.600	125	27	1	2	126	35	158	3.32e-63	190

Find 38 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAATCTCAATTCCTGTTAT+AGG	0.193029	5.4:+12107447	MS.gene59353:CDS
CTCCCTGCTGATCAGTGTTT+TGG	0.233472	5.4:+12107738	MS.gene59353:CDS
GGTCTTCCTAATGGTCCTTT+TGG	0.235150	5.4:+12107615	MS.gene59353:CDS
TGTTGAAGGGTTGTCATATT+TGG	0.326036	5.4:+12107650	MS.gene59353:CDS
TTTCAACAAGGTTACATTCC+TGG	0.368209	5.4:+12107711	MS.gene59353:CDS
GGGTTATTAGGTGCTGTTGA+AGG	0.373371	5.4:+12107636	MS.gene59353:CDS
GCTATTGCTGCTATCTCTGT+TGG	0.385488	5.4:-12107417	None:intergenic
TGCTGCTATCTCTGTTGGGC+TGG	0.397920	5.4:-12107412	None:intergenic
ACTGGTTCTGGTCTTCCTAA+TGG	0.397978	5.4:+12107606	MS.gene59353:CDS
CCAGGACCAGGTGGATCAAT+TGG	0.412152	5.4:+12107513	MS.gene59353:CDS
CTCTACACTCTCAAAACAAC+TGG	0.418846	5.4:+12107477	MS.gene59353:CDS
AATAACCCAAAAGGACCATT+AGG	0.423242	5.4:-12107621	None:intergenic
TAGAGAGACCAACCTATAAC+AGG	0.435409	5.4:-12107459	None:intergenic
GGATCAATTGGTGCATTAGA+AGG	0.445690	5.4:+12107525	MS.gene59353:CDS
TATCCAAAACACTGATCAGC+AGG	0.446026	5.4:-12107741	None:intergenic
CTATTGCTGCTATCTCTGTT+GGG	0.455946	5.4:-12107416	None:intergenic
TGTAAGTTATCTTGTAGTTG+TGG	0.468651	5.4:+12107548	MS.gene59353:CDS
GTAAGTTATCTTGTAGTTGT+GGG	0.479034	5.4:+12107549	MS.gene59353:CDS
TAGTTGTGGGAATTGTTGCT+TGG	0.495156	5.4:+12107562	MS.gene59353:CDS
CCAATTGATCCACCTGGTCC+TGG	0.509784	5.4:-12107513	None:intergenic
GGTTATTAGGTGCTGTTGAA+GGG	0.510819	5.4:+12107637	MS.gene59353:CDS
TGTGGTCTTCCACCAGGACC+AGG	0.516068	5.4:+12107501	MS.gene59353:CDS
AGGGTTGTCATATTTGGCAT+TGG	0.526933	5.4:+12107656	MS.gene59353:CDS
TCTCAATTCCTGTTATAGGT+TGG	0.527179	5.4:+12107451	MS.gene59353:CDS
TGATCAGCAGGGAGAGGACC+AGG	0.529852	5.4:-12107729	None:intergenic
ACAGAGATAGCAGCAATAGC+AGG	0.544713	5.4:+12107420	MS.gene59353:CDS
ACAGCACCTAATAACCCAAA+AGG	0.547610	5.4:-12107630	None:intergenic
GAGATAGCAGCAATAGCAGG+TGG	0.565377	5.4:+12107423	MS.gene59353:CDS
AAACACTGATCAGCAGGGAG+AGG	0.597184	5.4:-12107735	None:intergenic
ACTCTCAAAACAACTGGTTG+TGG	0.598063	5.4:+12107483	MS.gene59353:CDS
ATAACAAACATGGCAAAGGA+AGG	0.600615	5.4:+12107375	None:intergenic
ACTGGTTGTGGTCTTCCACC+AGG	0.608557	5.4:+12107495	MS.gene59353:CDS
CAAGATAACAAACATGGCAA+AGG	0.614035	5.4:+12107371	None:intergenic
ATTGATCCACCTGGTCCTGG+TGG	0.622088	5.4:-12107510	None:intergenic
GGTCTTCCACCAGGACCAGG+TGG	0.646487	5.4:+12107504	MS.gene59353:CDS
AATGCACCAATTGATCCACC+TGG	0.654079	5.4:-12107519	None:intergenic
AGATAGCAGCAATAGCAGGT+GGG	0.659143	5.4:+12107424	MS.gene59353:CDS
ATCCAAAACACTGATCAGCA+GGG	0.675935	5.4:-12107740	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATATACCAAAAATAAAAC+TGG	+	chr5.4:12107588-12107607	MS.gene59353:CDS	15.0%
!	TTAATCTCAATTCCTGTTAT+AGG	+	chr5.4:12107447-12107466	MS.gene59353:CDS	25.0%
	GTAAGTTATCTTGTAGTTGT+GGG	+	chr5.4:12107549-12107568	MS.gene59353:CDS	30.0%
	TGTAAGTTATCTTGTAGTTG+TGG	+	chr5.4:12107548-12107567	MS.gene59353:CDS	30.0%
!	ACCAAAAATAAAACTGGTTC+TGG	+	chr5.4:12107594-12107613	MS.gene59353:CDS	30.0%
!!!	ACCAGAACCAGTTTTATTTT+TGG	-	chr5.4:12107598-12107617	None:intergenic	30.0%
!!!	GTTGCTATTGTTGTTGTTTT+TGG	+	chr5.4:12107678-12107697	MS.gene59353:CDS	30.0%
	AATAACCCAAAAGGACCATT+AGG	-	chr5.4:12107624-12107643	None:intergenic	35.0%
	TCTCAATTCCTGTTATAGGT+TGG	+	chr5.4:12107451-12107470	MS.gene59353:CDS	35.0%
	TGTTGAAGGGTTGTCATATT+TGG	+	chr5.4:12107650-12107669	MS.gene59353:CDS	35.0%
	TTTCAACAAGGTTACATTCC+TGG	+	chr5.4:12107711-12107730	MS.gene59353:CDS	35.0%
!	GGTTTGCAGTATTTTCAACA+AGG	+	chr5.4:12107699-12107718	MS.gene59353:CDS	35.0%
!!!	AATGGTCCTTTTGGGTTATT+AGG	+	chr5.4:12107624-12107643	MS.gene59353:CDS	35.0%
	ACAGCACCTAATAACCCAAA+AGG	-	chr5.4:12107633-12107652	None:intergenic	40.0%
	ACTCTCAAAACAACTGGTTG+TGG	+	chr5.4:12107483-12107502	MS.gene59353:CDS	40.0%
	AGGGTTGTCATATTTGGCAT+TGG	+	chr5.4:12107656-12107675	MS.gene59353:CDS	40.0%
	ATCCAAAACACTGATCAGCA+GGG	-	chr5.4:12107743-12107762	None:intergenic	40.0%
	CTATTGCTGCTATCTCTGTT+GGG	-	chr5.4:12107419-12107438	None:intergenic	40.0%
	CTCTACACTCTCAAAACAAC+TGG	+	chr5.4:12107477-12107496	MS.gene59353:CDS	40.0%
	GGATCAATTGGTGCATTAGA+AGG	+	chr5.4:12107525-12107544	MS.gene59353:CDS	40.0%
	TAGAGAGACCAACCTATAAC+AGG	-	chr5.4:12107462-12107481	None:intergenic	40.0%
	TAGTTGTGGGAATTGTTGCT+TGG	+	chr5.4:12107562-12107581	MS.gene59353:CDS	40.0%
	TATCCAAAACACTGATCAGC+AGG	-	chr5.4:12107744-12107763	None:intergenic	40.0%
!	GTCTTCCTAATGGTCCTTTT+GGG	+	chr5.4:12107616-12107635	MS.gene59353:CDS	40.0%
!!	GGTTATTAGGTGCTGTTGAA+GGG	+	chr5.4:12107637-12107656	MS.gene59353:CDS	40.0%
	AATGCACCAATTGATCCACC+TGG	-	chr5.4:12107522-12107541	None:intergenic	45.0%
	ACAGAGATAGCAGCAATAGC+AGG	+	chr5.4:12107420-12107439	MS.gene59353:CDS	45.0%
	AGATAGCAGCAATAGCAGGT+GGG	+	chr5.4:12107424-12107443	MS.gene59353:CDS	45.0%
	GCTATTGCTGCTATCTCTGT+TGG	-	chr5.4:12107420-12107439	None:intergenic	45.0%
!	GGTCTTCCTAATGGTCCTTT+TGG	+	chr5.4:12107615-12107634	MS.gene59353:CDS	45.0%
!!	ACTGGTTCTGGTCTTCCTAA+TGG	+	chr5.4:12107606-12107625	MS.gene59353:CDS	45.0%
!!	GGGTTATTAGGTGCTGTTGA+AGG	+	chr5.4:12107636-12107655	MS.gene59353:CDS	45.0%
	AAACACTGATCAGCAGGGAG+AGG	-	chr5.4:12107738-12107757	None:intergenic	50.0%
	GAGATAGCAGCAATAGCAGG+TGG	+	chr5.4:12107423-12107442	MS.gene59353:CDS	50.0%
!	CTCCCTGCTGATCAGTGTTT+TGG	+	chr5.4:12107738-12107757	MS.gene59353:CDS	50.0%
	ACTGGTTGTGGTCTTCCACC+AGG	+	chr5.4:12107495-12107514	MS.gene59353:CDS	55.0%
	ATTGATCCACCTGGTCCTGG+TGG	-	chr5.4:12107513-12107532	None:intergenic	55.0%
	CCAATTGATCCACCTGGTCC+TGG	-	chr5.4:12107516-12107535	None:intergenic	55.0%
	CCAGGACCAGGTGGATCAAT+TGG	+	chr5.4:12107513-12107532	MS.gene59353:CDS	55.0%
	TGCTGCTATCTCTGTTGGGC+TGG	-	chr5.4:12107415-12107434	None:intergenic	55.0%
	TGATCAGCAGGGAGAGGACC+AGG	-	chr5.4:12107732-12107751	None:intergenic	60.0%
	TGTGGTCTTCCACCAGGACC+AGG	+	chr5.4:12107501-12107520	MS.gene59353:CDS	60.0%
	GGTCTTCCACCAGGACCAGG+TGG	+	chr5.4:12107504-12107523	MS.gene59353:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	12107384	12107764	12107384	ID=MS.gene59353
chr5.4	mRNA	12107384	12107764	12107384	ID=MS.gene59353.t1;Parent=MS.gene59353
chr5.4	exon	12107384	12107764	12107384	ID=MS.gene59353.t1.exon1;Parent=MS.gene59353.t1
chr5.4	CDS	12107384	12107764	12107384	ID=cds.MS.gene59353.t1;Parent=MS.gene59353.t1

Gene Sequence

>MS.gene59353

ATGGCAAAGGAAGGAAGCGACACTAACACCAGCCCAACAGAGATAGCAGCAATAGCAGGTGGGTTAATCTCAATTCCTGTTATAGGTTGGTCTCTCTACACTCTCAAAACAACTGGTTGTGGTCTTCCACCAGGACCAGGTGGATCAATTGGTGCATTAGAAGGTGTAAGTTATCTTGTAGTTGTGGGAATTGTTGCTTGGTCTTTATATACCAAAAATAAAACTGGTTCTGGTCTTCCTAATGGTCCTTTTGGGTTATTAGGTGCTGTTGAAGGGTTGTCATATTTGGCATTGGTTGCTATTGTTGTTGTTTTTGGTTTGCAGTATTTTCAACAAGGTTACATTCCTGGTCCTCTCCCTGCTGATCAGTGTTTTGGATAG

Protein sequence

>MS.gene59353.t1

MAKEGSDTNTSPTEIAAIAGGLISIPVIGWSLYTLKTTGCGLPPGPGGSIGALEGVSYLVVVGIVAWSLYTKNKTGSGLPNGPFGLLGAVEGLSYLALVAIVVVFGLQYFQQGYIPGPLPADQCFG