Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71871.t1 | XP_013464645.1 | 90.5 | 472 | 42 | 2 | 188 | 658 | 186 | 655 | 5.70E-226 | 793.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71871.t1 | A0A072VKJ8 | 90.5 | 472 | 42 | 2 | 188 | 658 | 186 | 655 | 4.1e-226 | 793.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene71871 | 0.845694 | 3.46E-59 | -1.69E-46 |
| MS.gene049230 | MS.gene71871 | 0.816683 | 4.87E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene71871 | 0.859359 | 4.37E-63 | -1.69E-46 |
| MS.gene049382 | MS.gene71871 | 0.802796 | 4.73E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene71871 | 0.823296 | 1.50E-53 | -1.69E-46 |
| MS.gene050105 | MS.gene71871 | 0.814948 | 1.19E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene71871 | 0.841633 | 4.22E-58 | -1.69E-46 |
| MS.gene050227 | MS.gene71871 | 0.841158 | 5.63E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene71871 | 0.844635 | 6.69E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene71871 | 0.86535 | 6.29E-65 | -1.69E-46 |
| MS.gene050605 | MS.gene71871 | 0.817417 | 3.33E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene71871 | -0.841998 | 3.38E-58 | -1.69E-46 |
| MS.gene050629 | MS.gene71871 | -0.819565 | 1.09E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene71871 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene050680 | MS.gene71871 | 0.817257 | 3.62E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene71871 | 0.812147 | 4.91E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene71871 | 0.815388 | 9.49E-52 | -1.69E-46 |
| MS.gene050724 | MS.gene71871 | 0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene71871 | 0.815807 | 7.65E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene71871 | 0.806045 | 9.95E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene71871 | 0.807172 | 5.75E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene71871 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene71871 | 0.811324 | 7.41E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene71871 | 0.806333 | 8.66E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene71871 | 0.820408 | 6.97E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene71871 | 0.825476 | 4.59E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene71871 | 0.807179 | 5.73E-50 | -1.69E-46 |
| MS.gene051349 | MS.gene71871 | 0.801257 | 9.80E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene71871 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene051370 | MS.gene71871 | 0.805151 | 1.53E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene71871 | 0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene71871 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene71871 | 0.800394 | 1.47E-48 | -1.69E-46 |
| MS.gene051935 | MS.gene71871 | 0.818189 | 2.23E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene71871 | 0.818183 | 2.24E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene71871 | 0.805438 | 1.33E-49 | -1.69E-46 |
| MS.gene052042 | MS.gene71871 | 0.801022 | 1.10E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene71871 | 0.82605 | 3.36E-54 | -1.69E-46 |
| MS.gene052190 | MS.gene71871 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene71871 | 0.807924 | 3.98E-50 | -1.69E-46 |
| MS.gene052384 | MS.gene71871 | 0.802329 | 5.91E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene71871 | 0.803007 | 4.28E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene71871 | 0.846282 | 2.40E-59 | -1.69E-46 |
| MS.gene052464 | MS.gene71871 | 0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene71871 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene71871 | 0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene052677 | MS.gene71871 | 0.807545 | 4.80E-50 | -1.69E-46 |
| MS.gene052858 | MS.gene71871 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene71871 | 0.825306 | 5.04E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene71871 | 0.839922 | 1.19E-57 | -1.69E-46 |
| MS.gene05288 | MS.gene71871 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene71871 | 0.831123 | 1.99E-55 | -1.69E-46 |
| MS.gene053006 | MS.gene71871 | 0.800389 | 1.47E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene71871 | 0.85215 | 5.58E-61 | -1.69E-46 |
| MS.gene053166 | MS.gene71871 | 0.815363 | 9.61E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene71871 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene71871 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene053584 | MS.gene71871 | 0.812255 | 4.65E-51 | -1.69E-46 |
| MS.gene054083 | MS.gene71871 | 0.809311 | 2.01E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene71871 | 0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene71871 | 0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene05417 | MS.gene71871 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene71871 | 0.818792 | 1.63E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene71871 | 0.819477 | 1.14E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene71871 | 0.825943 | 3.56E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene71871 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene71871 | 0.82388 | 1.09E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene71871 | 0.829891 | 3.99E-55 | -1.69E-46 |
| MS.gene054657 | MS.gene71871 | 0.8066 | 7.60E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene71871 | 0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene71871 | 0.846152 | 2.60E-59 | -1.69E-46 |
| MS.gene054994 | MS.gene71871 | 0.819004 | 1.46E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene71871 | 0.844594 | 6.86E-59 | -1.69E-46 |
| MS.gene055356 | MS.gene71871 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene71871 | 0.807775 | 4.29E-50 | -1.69E-46 |
| MS.gene055363 | MS.gene71871 | 0.81492 | 1.20E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene71871 | 0.827261 | 1.72E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene71871 | 0.874056 | 9.10E-68 | -1.69E-46 |
| MS.gene055818 | MS.gene71871 | 0.857865 | 1.22E-62 | -1.69E-46 |
| MS.gene055926 | MS.gene71871 | 0.80908 | 2.26E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene71871 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene71871 | 0.811161 | 8.04E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene71871 | 0.83981 | 1.27E-57 | -1.69E-46 |
| MS.gene056552 | MS.gene71871 | 0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene71871 | 0.816468 | 5.45E-52 | -1.69E-46 |
| MS.gene056873 | MS.gene71871 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene71871 | 0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene71871 | 0.822641 | 2.13E-53 | -1.69E-46 |
| MS.gene057156 | MS.gene71871 | -0.812272 | 4.61E-51 | -1.69E-46 |
| MS.gene057194 | MS.gene71871 | 0.809474 | 1.86E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene71871 | 0.82143 | 4.05E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene71871 | 0.859053 | 5.40E-63 | -1.69E-46 |
| MS.gene057693 | MS.gene71871 | 0.818776 | 1.64E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene71871 | 0.823131 | 1.63E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene71871 | 0.804512 | 2.08E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene71871 | 0.8259 | 3.64E-54 | -1.69E-46 |
| MS.gene058081 | MS.gene71871 | 0.815563 | 8.67E-52 | -1.69E-46 |
| MS.gene058139 | MS.gene71871 | 0.803464 | 3.44E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene71871 | 0.841948 | 3.49E-58 | -1.69E-46 |
| MS.gene058399 | MS.gene71871 | 0.837433 | 5.21E-57 | -1.69E-46 |
| MS.gene058435 | MS.gene71871 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene058503 | MS.gene71871 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene71871 | 0.803677 | 3.11E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene71871 | 0.842793 | 2.08E-58 | -1.69E-46 |
| MS.gene058625 | MS.gene71871 | 0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene71871 | 0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene71871 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene71871 | 0.822277 | 2.58E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene71871 | 0.82095 | 5.23E-53 | -1.69E-46 |
| MS.gene059249 | MS.gene71871 | 0.806411 | 8.33E-50 | -1.69E-46 |
| MS.gene059306 | MS.gene71871 | 0.800816 | 1.21E-48 | -1.69E-46 |
| MS.gene059382 | MS.gene71871 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene71871 | 0.811045 | 8.52E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene71871 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene059789 | MS.gene71871 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene71871 | 0.82618 | 3.13E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene71871 | 0.835542 | 1.58E-56 | -1.69E-46 |
| MS.gene060137 | MS.gene71871 | -0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene71871 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene71871 | 0.813369 | 2.65E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene71871 | 0.860241 | 2.37E-63 | -1.69E-46 |
| MS.gene06052 | MS.gene71871 | 0.822483 | 2.31E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene71871 | 0.994615 | 1.01E-208 | -1.69E-46 |
| MS.gene060685 | MS.gene71871 | 0.997413 | 4.29E-242 | -1.69E-46 |
| MS.gene060802 | MS.gene71871 | 0.861233 | 1.18E-63 | -1.69E-46 |
| MS.gene060803 | MS.gene71871 | 0.868887 | 4.68E-66 | -1.69E-46 |
| MS.gene060918 | MS.gene71871 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene71871 | 0.862187 | 6.05E-64 | -1.69E-46 |
| MS.gene061040 | MS.gene71871 | -0.814862 | 1.24E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71871.t1 | MTR_2g078660 | 90.895 | 659 | 55 | 3 | 1 | 658 | 1 | 655 | 0.0 | 994 |
| MS.gene71871.t1 | MTR_2g078660 | 90.484 | 641 | 56 | 3 | 1 | 640 | 1 | 637 | 0.0 | 952 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71871.t1 | AT5G53930 | 68.750 | 48 | 15 | 0 | 611 | 658 | 482 | 529 | 4.71e-14 | 75.9 |
Find 149 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCACTGCTATTAATATTC+TGG | 0.218197 | 2.2:-16013279 | None:intergenic |
| AAATCTCTTCCACTGTTTCT+TGG | 0.243532 | 2.2:-16012776 | None:intergenic |
| AATGAAATTGATTACCTTAG+AGG | 0.257708 | 2.2:-16010905 | None:intergenic |
| GCTACTCATATCTCTAAGTT+TGG | 0.257917 | 2.2:-16012420 | None:intergenic |
| ATCATCTACAATCTCCTCTT+TGG | 0.285420 | 2.2:-16012252 | None:intergenic |
| TCAGCCCTCAATTCCTCTTC+TGG | 0.307736 | 2.2:-16012353 | None:intergenic |
| CTTTCTTTCTGTTCTTCCCC+TGG | 0.336102 | 2.2:-16012012 | None:intergenic |
| GATGAATTTACAGAATTGAT+TGG | 0.337263 | 2.2:+16012221 | MS.gene71871:CDS |
| AATTCCTGGTTATCAGTAAC+TGG | 0.342960 | 2.2:-16012641 | None:intergenic |
| TAATATTCTGGATTGAAGAT+TGG | 0.350049 | 2.2:-16013267 | None:intergenic |
| AAGCATAACAACTTGGATAA+GGG | 0.352245 | 2.2:+16013124 | MS.gene71871:CDS |
| ATTCATTGACTACTTTGTTT+CGG | 0.354273 | 2.2:-16012877 | None:intergenic |
| GAAATCACGTAGGAAGAAAA+AGG | 0.356643 | 2.2:+16011893 | MS.gene71871:CDS |
| AAACCCCTGCCTTGGCTAGA+AGG | 0.362464 | 2.2:+16013610 | MS.gene71871:CDS |
| CAGTAACTGGTTGCTTCACT+TGG | 0.364914 | 2.2:-16012628 | None:intergenic |
| ACTTATCTTGAACCAATTCC+TGG | 0.367721 | 2.2:-16012655 | None:intergenic |
| CAACGATGTGTCCATGCCTT+TGG | 0.371538 | 2.2:-16011688 | None:intergenic |
| AACTTGGATAAAGATTTATC+TGG | 0.372457 | 2.2:+16012800 | MS.gene71871:CDS |
| GTGCAAAGAGTGGTAGATAT+AGG | 0.372917 | 2.2:+16012072 | MS.gene71871:CDS |
| ACCTTCCAATGCACAGTTGC+CGG | 0.374070 | 2.2:+16013204 | MS.gene71871:CDS |
| AAGAAACTAGTTTGCCGGTT+AGG | 0.376205 | 2.2:+16012732 | MS.gene71871:CDS |
| TAAGCATAACAACTTGGATA+AGG | 0.378692 | 2.2:+16013123 | MS.gene71871:CDS |
| CAACTTTCCACGAGGAAGTT+CGG | 0.380786 | 2.2:-16012996 | None:intergenic |
| TGGGCTTAGAAGAGACATTC+AGG | 0.383625 | 2.2:+16011950 | MS.gene71871:CDS |
| ACAGTGAATATGAGAGTTCC+AGG | 0.383701 | 2.2:+16011994 | MS.gene71871:CDS |
| GATTACCTTAGAGGAATGTT+TGG | 0.390546 | 2.2:-16010896 | None:intergenic |
| TAATCTGAATGACGTTGATT+TGG | 0.391625 | 2.2:+16012505 | MS.gene71871:CDS |
| ACACTCCAAACATTCCTCTA+AGG | 0.401230 | 2.2:+16010891 | MS.gene71871:CDS |
| GATAATGTCAAAGACATTAG+AGG | 0.408028 | 2.2:+16013055 | MS.gene71871:CDS |
| AACTTTCCACGAGGAAGTTC+GGG | 0.409437 | 2.2:-16012995 | None:intergenic |
| AGTTACTGATAACCAGGAAT+TGG | 0.412828 | 2.2:+16012643 | MS.gene71871:CDS |
| ACTAAATTTCTCCTCCTAAC+CGG | 0.415379 | 2.2:-16012746 | None:intergenic |
| GGAAGTTCGGGCATGGTTGT+TGG | 0.418097 | 2.2:-16012983 | None:intergenic |
| TGTAGAAGAAACTAGTTTGC+CGG | 0.420779 | 2.2:+16012727 | MS.gene71871:CDS |
| TGCAAAGAGTGGTAGATATA+GGG | 0.420865 | 2.2:+16012073 | MS.gene71871:CDS |
| CTACTCATATCTCTAAGTTT+GGG | 0.422245 | 2.2:-16012419 | None:intergenic |
| GATGGCTTGTGCACCGGAAA+AGG | 0.430440 | 2.2:+16012838 | MS.gene71871:CDS |
| ATTAGAGGAGTGCCTTCTGC+TGG | 0.432280 | 2.2:+16013070 | MS.gene71871:CDS |
| GGGGATAAACCACCTATTCA+TGG | 0.432834 | 2.2:+16013091 | MS.gene71871:CDS |
| TCATCAGTAGAGAATAATTC+AGG | 0.434046 | 2.2:+16013346 | MS.gene71871:CDS |
| GAGAGAAGCAAGTGTTAGTT+CGG | 0.437167 | 2.2:+16011920 | MS.gene71871:CDS |
| TTGTCCCAGCACGAACTTCA+AGG | 0.441812 | 2.2:-16012442 | None:intergenic |
| TTTGCTCAAACTGAGAGCTC+TGG | 0.447594 | 2.2:-16013390 | None:intergenic |
| TGTGATGAGGGGTGGTGAAT+TGG | 0.449971 | 2.2:+16013423 | MS.gene71871:CDS |
| TCCTCGTGGAAAGTTGGTCT+TGG | 0.450017 | 2.2:+16013003 | MS.gene71871:CDS |
| TGGGACAAGTGAATCTAAAA+AGG | 0.456531 | 2.2:+16012457 | MS.gene71871:CDS |
| AGTTGCCTTCTAGCCAAGGC+AGG | 0.470893 | 2.2:-16013615 | None:intergenic |
| AATCCACCTAGATTTGTTCT+CGG | 0.471685 | 2.2:-16012168 | None:intergenic |
| AAAGTCGTAAGAAGCGGGTT+CGG | 0.482768 | 2.2:+16011775 | MS.gene71871:CDS |
| TGATGAATGTACTTACGAAC+AGG | 0.485911 | 2.2:+16012127 | MS.gene71871:CDS |
| GGCAAACTAGTTTCTTCTAC+AGG | 0.486591 | 2.2:-16012725 | None:intergenic |
| TAATACCATGACGAGCAATC+TGG | 0.486746 | 2.2:+16012904 | MS.gene71871:CDS |
| CCCTAAGAAAACCCCTGCCT+TGG | 0.492302 | 2.2:+16013602 | MS.gene71871:CDS |
| TTAAATGTAGATCCATGAAT+AGG | 0.493845 | 2.2:-16013103 | None:intergenic |
| ACGTGTCCGAGAACAAATCT+AGG | 0.494576 | 2.2:+16012162 | MS.gene71871:CDS |
| AGTTATTACTGTTGCAAAAG+AGG | 0.495914 | 2.2:+16012196 | MS.gene71871:CDS |
| GTTCGTAAGTACATTCATCA+TGG | 0.496035 | 2.2:-16012124 | None:intergenic |
| GTGAGGACTCTTTGTATGCC+AGG | 0.498220 | 2.2:+16011823 | MS.gene71871:CDS |
| CAGGGGAAGAACAGAAAGAA+AGG | 0.500102 | 2.2:+16012013 | MS.gene71871:CDS |
| TTAGAAGAGACATTCAGGTT+GGG | 0.502512 | 2.2:+16011955 | MS.gene71871:CDS |
| GAATCATGGCAAGGATCAGA+TGG | 0.504852 | 2.2:-16012935 | None:intergenic |
| GAATGTTCAGGTTAGCTACA+AGG | 0.509476 | 2.2:+16013572 | MS.gene71871:intron |
| GTGTTAGTTCGGTGAGCAGT+GGG | 0.510367 | 2.2:+16011931 | MS.gene71871:CDS |
| AGAAGATCGAGGGGAAGAAG+TGG | 0.511869 | 2.2:+16012047 | MS.gene71871:CDS |
| ACTCACCGGCAACTGTGCAT+TGG | 0.512234 | 2.2:-16013209 | None:intergenic |
| CGAACTTCCTCGTGGAAAGT+TGG | 0.516946 | 2.2:+16012997 | MS.gene71871:CDS |
| CAGTGGAAGAGATTTGAACT+TGG | 0.517501 | 2.2:+16012784 | MS.gene71871:CDS |
| GACGAGTCATGCAATGCTGC+AGG | 0.517980 | 2.2:+16013310 | MS.gene71871:CDS |
| TGCACCAGAAGAGGAATTGA+GGG | 0.520146 | 2.2:+16012349 | MS.gene71871:CDS |
| AGTAGCCTTGAAGTTCGTGC+TGG | 0.520350 | 2.2:+16012437 | MS.gene71871:CDS |
| GAGGGGTGGTGAATTGGTAC+AGG | 0.520556 | 2.2:+16013429 | MS.gene71871:CDS |
| TTAGAGGAGTGCCTTCTGCT+GGG | 0.521009 | 2.2:+16013071 | MS.gene71871:CDS |
| GTTATTACTGTTGCAAAAGA+GGG | 0.523669 | 2.2:+16012197 | MS.gene71871:CDS |
| TATTTGGTGGTTTAGACTAA+GGG | 0.525292 | 2.2:+16011579 | MS.gene71871:intron |
| ATGCACCAGAAGAGGAATTG+AGG | 0.526701 | 2.2:+16012348 | MS.gene71871:CDS |
| CTTAGAAGAGACATTCAGGT+TGG | 0.526829 | 2.2:+16011954 | MS.gene71871:CDS |
| TGAGTGAGGCTGATGAAGAA+AGG | 0.531590 | 2.2:+16013227 | MS.gene71871:CDS |
| TGTCCTCTAGTTCTGAAGAT+AGG | 0.534094 | 2.2:+16011709 | MS.gene71871:CDS |
| TAAGAAACATAAATCGAAGA+AGG | 0.536474 | 2.2:+16011620 | MS.gene71871:CDS |
| TTCGTAAGTACATTCATCAT+GGG | 0.537747 | 2.2:-16012123 | None:intergenic |
| CTTAAGTTGCCTTCTAGCCA+AGG | 0.538577 | 2.2:-16013619 | None:intergenic |
| TCCACGAGGAAGTTCGGGCA+TGG | 0.538827 | 2.2:-16012990 | None:intergenic |
| GATTCAGATGGCTTGTGCAC+CGG | 0.539689 | 2.2:+16012832 | MS.gene71871:CDS |
| TCTTCATCAGCCTCACTCAC+CGG | 0.540161 | 2.2:-16013223 | None:intergenic |
| TTACTGTCATTACTTCTACA+AGG | 0.540510 | 2.2:-16012284 | None:intergenic |
| GAAAGACAAAAGAAGATCGA+GGG | 0.544223 | 2.2:+16012037 | MS.gene71871:CDS |
| AGAAGTGGAAGTGCAAAGAG+TGG | 0.545278 | 2.2:+16012062 | MS.gene71871:CDS |
| AGCATAACAACTTGGATAAG+GGG | 0.547479 | 2.2:+16013125 | MS.gene71871:CDS |
| AAACTAGTTTGCCGGTTAGG+AGG | 0.547624 | 2.2:+16012735 | MS.gene71871:CDS |
| TTGAGGGCTGAGGATGTGAC+AGG | 0.554815 | 2.2:+16012365 | MS.gene71871:CDS |
| TACACATGATGCACCAGAAG+AGG | 0.555450 | 2.2:+16012340 | MS.gene71871:CDS |
| CTCAAACTGAGAGCTCTGGT+TGG | 0.556049 | 2.2:-16013386 | None:intergenic |
| AGCGACTTTGAAGTGAATCA+TGG | 0.557127 | 2.2:-16012949 | None:intergenic |
| TACTGTCATTACTTCTACAA+GGG | 0.558096 | 2.2:-16012283 | None:intergenic |
| AGACCTATCTTCAGAACTAG+AGG | 0.558097 | 2.2:-16011712 | None:intergenic |
| AGAAGAGGAATTGAGGGCTG+AGG | 0.559554 | 2.2:+16012355 | MS.gene71871:CDS |
| TACATTTAAGCATAACAACT+TGG | 0.559898 | 2.2:+16013117 | MS.gene71871:CDS |
| CAATGCTGCAGGGATGTTGA+CGG | 0.560785 | 2.2:+16013321 | MS.gene71871:CDS |
| GTGGTTTAGACTAAGGGAAG+TGG | 0.561766 | 2.2:+16011585 | MS.gene71871:intron |
| ATCCAGAATATTAATAGCAG+TGG | 0.568393 | 2.2:+16013277 | MS.gene71871:CDS |
| TGTGAAAAGTCGTAAGAAGC+GGG | 0.568597 | 2.2:+16011770 | MS.gene71871:CDS |
| AAAGAGAAACCTCACGGCGA+CGG | 0.571181 | 2.2:-16011644 | None:intergenic |
| CATGGTTGTTGGCTTCAAAG+AGG | 0.572112 | 2.2:-16012972 | None:intergenic |
| CTATGATGATTCCAAAGGCA+TGG | 0.584367 | 2.2:+16011677 | MS.gene71871:CDS |
| GAAGTAATGACAGTAACGAT+GGG | 0.591074 | 2.2:+16012291 | MS.gene71871:CDS |
| TGAATCCAGATTGCTCGTCA+TGG | 0.593566 | 2.2:-16012909 | None:intergenic |
| TCATCATGGGGACTACTACA+AGG | 0.594139 | 2.2:-16012110 | None:intergenic |
| AATCATGGCAAGGATCAGAT+GGG | 0.595474 | 2.2:-16012934 | None:intergenic |
| TGGTTCTGTGAAGATTCAGA+TGG | 0.595563 | 2.2:+16012820 | MS.gene71871:CDS |
| GTAGCCTTGAAGTTCGTGCT+GGG | 0.595750 | 2.2:+16012438 | MS.gene71871:CDS |
| ACCGGCAACTGTGCATTGGA+AGG | 0.595875 | 2.2:-16013205 | None:intergenic |
| AAAGACAAAAGAAGATCGAG+GGG | 0.596140 | 2.2:+16012038 | MS.gene71871:CDS |
| GTTGCCTTCTAGCCAAGGCA+GGG | 0.596364 | 2.2:-16013614 | None:intergenic |
| TGCACAGTTGCCGGTGAGTG+AGG | 0.599112 | 2.2:+16013213 | MS.gene71871:CDS |
| GCAACCAGTTACTGATAACC+AGG | 0.600839 | 2.2:+16012637 | MS.gene71871:CDS |
| AATGCTGCAGGGATGTTGAC+GGG | 0.604088 | 2.2:+16013322 | MS.gene71871:CDS |
| CGGTCGACTGGACTTGACCT+CGG | 0.604399 | 2.2:-16012571 | None:intergenic |
| AGTGTTAGTTCGGTGAGCAG+TGG | 0.604734 | 2.2:+16011930 | MS.gene71871:CDS |
| TTGCCTTCTAGCCAAGGCAG+GGG | 0.609078 | 2.2:-16013613 | None:intergenic |
| GGTGGTTTATCCCCAGCAGA+AGG | 0.609791 | 2.2:-16013082 | None:intergenic |
| AATGTAGATCCATGAATAGG+TGG | 0.611994 | 2.2:-16013100 | None:intergenic |
| CAGTGAATATGAGAGTTCCA+GGG | 0.619436 | 2.2:+16011995 | MS.gene71871:CDS |
| ATGTGAAAAGTCGTAAGAAG+CGG | 0.621387 | 2.2:+16011769 | MS.gene71871:CDS |
| TAGAGGAGTGCCTTCTGCTG+GGG | 0.622873 | 2.2:+16013072 | MS.gene71871:CDS |
| AGAAAGACAAAAGAAGATCG+AGG | 0.626492 | 2.2:+16012036 | MS.gene71871:CDS |
| GTTGCTTATCCAAGAAACAG+TGG | 0.626747 | 2.2:+16012767 | MS.gene71871:CDS |
| CTTTGAAGTGAATCATGGCA+AGG | 0.631011 | 2.2:-16012944 | None:intergenic |
| TCAGACTATGATGATTCCAA+AGG | 0.631218 | 2.2:+16011672 | MS.gene71871:CDS |
| AGAAGTAATGACAGTAACGA+TGG | 0.631444 | 2.2:+16012290 | MS.gene71871:CDS |
| AGCTAGAAAGAGAAACCTCA+CGG | 0.631927 | 2.2:-16011650 | None:intergenic |
| AGATAAGCATGATGAGACGA+AGG | 0.634703 | 2.2:+16011869 | MS.gene71871:CDS |
| AATTCAGGCAAAGTACTAGA+CGG | 0.636302 | 2.2:+16013361 | MS.gene71871:CDS |
| GATTGGAAATGAAACCAAAG+AGG | 0.652440 | 2.2:+16012238 | MS.gene71871:CDS |
| ACCATGCCCGAACTTCCTCG+TGG | 0.665314 | 2.2:+16012989 | MS.gene71871:CDS |
| GAAAACTTAAGAAAGTTCCG+AGG | 0.676721 | 2.2:+16012554 | MS.gene71871:CDS |
| ACGAGTCATGCAATGCTGCA+GGG | 0.679829 | 2.2:+16013311 | MS.gene71871:CDS |
| AAGTAATGACAGTAACGATG+GGG | 0.680469 | 2.2:+16012292 | MS.gene71871:CDS |
| GGCTGATGAAGAAAGGAATG+CGG | 0.686058 | 2.2:+16013234 | MS.gene71871:CDS |
| TCGTAAGTACATTCATCATG+GGG | 0.695225 | 2.2:-16012122 | None:intergenic |
| AGTGAATATGAGAGTTCCAG+GGG | 0.696707 | 2.2:+16011996 | MS.gene71871:CDS |
| GAAGAAGGTCCGTCGCCGTG+AGG | 0.702834 | 2.2:+16011635 | MS.gene71871:CDS |
| ATCATGGCAAGGATCAGATG+GGG | 0.712928 | 2.2:-16012933 | None:intergenic |
| TGTCCGAGAACAAATCTAGG+TGG | 0.715026 | 2.2:+16012165 | MS.gene71871:CDS |
| AGTAATGACAGTAACGATGG+GGG | 0.715447 | 2.2:+16012293 | MS.gene71871:CDS |
| ACAATGACTGTGATGAGGGG+TGG | 0.719420 | 2.2:+16013415 | MS.gene71871:CDS |
| GCCAAGACCAACTTTCCACG+AGG | 0.726875 | 2.2:-16013004 | None:intergenic |
| AAAACAATGACTGTGATGAG+GGG | 0.727932 | 2.2:+16013412 | MS.gene71871:CDS |
| ATACAGCTCTGACAGCAGTG+AGG | 0.754256 | 2.2:+16011806 | MS.gene71871:CDS |
| AGACGAAGGAGAAATCACGT+AGG | 0.760829 | 2.2:+16011883 | MS.gene71871:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAGTAGTAATAATAAAA+AGG | - | chr2.2:16013546-16013565 | None:intergenic | 10.0% |
| !!! | CATATTTATTAATTTTAATC+GGG | + | chr2.2:16010963-16010982 | MS.gene71871:intron | 10.0% |
| !!! | TTGCTATTTATATAATTTTT+CGG | + | chr2.2:16011029-16011048 | MS.gene71871:intron | 10.0% |
| !!! | TTGAATTTTTCTATTTGATT+TGG | + | chr2.2:16011478-16011497 | MS.gene71871:intron | 15.0% |
| !! | TAGTAATAATAAAAAGGACA+GGG | - | chr2.2:16013540-16013559 | None:intergenic | 20.0% |
| !!! | AATATGCATTTTTTCCTATT+TGG | + | chr2.2:16011563-16011582 | MS.gene71871:intron | 20.0% |
| !!! | GATGTTATTTTTTTGGTTTA+AGG | + | chr2.2:16011191-16011210 | MS.gene71871:intron | 20.0% |
| !!! | GCAGAAAGTATTAAAAATAA+GGG | + | chr2.2:16013025-16013044 | MS.gene71871:CDS | 20.0% |
| ! | AACTTGGATAAAGATTTATC+TGG | + | chr2.2:16012800-16012819 | MS.gene71871:CDS | 25.0% |
| ! | AATGAAATTGATTACCTTAG+AGG | - | chr2.2:16010908-16010927 | None:intergenic | 25.0% |
| ! | ATATATGATAGACACAAAGT+TGG | - | chr2.2:16011064-16011083 | None:intergenic | 25.0% |
| ! | GATGAATTTACAGAATTGAT+TGG | + | chr2.2:16012221-16012240 | MS.gene71871:CDS | 25.0% |
| ! | GTAGTAATAATAAAAAGGAC+AGG | - | chr2.2:16013541-16013560 | None:intergenic | 25.0% |
| ! | TAAGAAACATAAATCGAAGA+AGG | + | chr2.2:16011620-16011639 | MS.gene71871:CDS | 25.0% |
| ! | TAATATTCTGGATTGAAGAT+TGG | - | chr2.2:16013270-16013289 | None:intergenic | 25.0% |
| ! | TACATTTAAGCATAACAACT+TGG | + | chr2.2:16013117-16013136 | MS.gene71871:CDS | 25.0% |
| ! | TTAAATGTAGATCCATGAAT+AGG | - | chr2.2:16013106-16013125 | None:intergenic | 25.0% |
| ! | TTATTTCCATAAATTCTCCA+GGG | + | chr2.2:16011326-16011345 | MS.gene71871:intron | 25.0% |
| !! | AAAAACAGATTTTTATCTCC+TGG | - | chr2.2:16011143-16011162 | None:intergenic | 25.0% |
| !! | AAAACAGATTTTTATCTCCT+GGG | - | chr2.2:16011142-16011161 | None:intergenic | 25.0% |
| !! | ATTCATTGACTACTTTGTTT+CGG | - | chr2.2:16012880-16012899 | None:intergenic | 25.0% |
| !! | CTAATAATTTGTGAATGTTC+AGG | + | chr2.2:16013560-16013579 | MS.gene71871:intron | 25.0% |
| !! | TTTCTGTTCAGAAGTTTTTA+CGG | - | chr2.2:16012594-16012613 | None:intergenic | 25.0% |
| !!! | GGCAGAAAGTATTAAAAATA+AGG | + | chr2.2:16013024-16013043 | MS.gene71871:CDS | 25.0% |
| !!! | GGTGATTGATGTTATTTTTT+TGG | + | chr2.2:16011184-16011203 | MS.gene71871:intron | 25.0% |
| AAAAAACAATGACTGTGATG+AGG | + | chr2.2:16013410-16013429 | MS.gene71871:CDS | 30.0% | |
| AAAAACAATGACTGTGATGA+GGG | + | chr2.2:16013411-16013430 | MS.gene71871:CDS | 30.0% | |
| AAGCATAACAACTTGGATAA+GGG | + | chr2.2:16013124-16013143 | MS.gene71871:CDS | 30.0% | |
| AGTTATTACTGTTGCAAAAG+AGG | + | chr2.2:16012196-16012215 | MS.gene71871:CDS | 30.0% | |
| ATAATAAAAAGGACAGGGAA+AGG | - | chr2.2:16013535-16013554 | None:intergenic | 30.0% | |
| ATCCAGAATATTAATAGCAG+TGG | + | chr2.2:16013277-16013296 | MS.gene71871:CDS | 30.0% | |
| ATTGACATAAACACTTGTGA+CGG | + | chr2.2:16011250-16011269 | MS.gene71871:intron | 30.0% | |
| CTACTCATATCTCTAAGTTT+GGG | - | chr2.2:16012422-16012441 | None:intergenic | 30.0% | |
| CTTATTTCCATAAATTCTCC+AGG | + | chr2.2:16011325-16011344 | MS.gene71871:intron | 30.0% | |
| GATAATGTCAAAGACATTAG+AGG | + | chr2.2:16013055-16013074 | MS.gene71871:CDS | 30.0% | |
| GGAGAATTTATGGAAATAAG+CGG | - | chr2.2:16011325-16011344 | None:intergenic | 30.0% | |
| GTTATTACTGTTGCAAAAGA+GGG | + | chr2.2:16012197-16012216 | MS.gene71871:CDS | 30.0% | |
| TAAGCATAACAACTTGGATA+AGG | + | chr2.2:16013123-16013142 | MS.gene71871:CDS | 30.0% | |
| TACTGTCATTACTTCTACAA+GGG | - | chr2.2:16012286-16012305 | None:intergenic | 30.0% | |
| TCATCAGTAGAGAATAATTC+AGG | + | chr2.2:16013346-16013365 | MS.gene71871:CDS | 30.0% | |
| TTACTGTCATTACTTCTACA+AGG | - | chr2.2:16012287-16012306 | None:intergenic | 30.0% | |
| TTCGTAAGTACATTCATCAT+GGG | - | chr2.2:16012126-16012145 | None:intergenic | 30.0% | |
| ! | ATTAAGTTGTTTACCTATGC+AGG | + | chr2.2:16011444-16011463 | MS.gene71871:intron | 30.0% |
| ! | TAATCTGAATGACGTTGATT+TGG | + | chr2.2:16012505-16012524 | MS.gene71871:CDS | 30.0% |
| ! | TATTTGGTGGTTTAGACTAA+GGG | + | chr2.2:16011579-16011598 | MS.gene71871:intron | 30.0% |
| ! | TTAAGTTGTTTACCTATGCA+GGG | + | chr2.2:16011445-16011464 | MS.gene71871:intron | 30.0% |
| !!! | ATGCATTTTTTCCTATTTGG+TGG | + | chr2.2:16011566-16011585 | MS.gene71871:intron | 30.0% |
| !!! | TTTTGGTTTAAGGATCTGTT+TGG | + | chr2.2:16011201-16011220 | MS.gene71871:intron | 30.0% |
| AAAACAATGACTGTGATGAG+GGG | + | chr2.2:16013412-16013431 | MS.gene71871:CDS | 35.0% | |
| AAAGACAAAAGAAGATCGAG+GGG | + | chr2.2:16012038-16012057 | MS.gene71871:CDS | 35.0% | |
| AAGTAATGACAGTAACGATG+GGG | + | chr2.2:16012292-16012311 | MS.gene71871:CDS | 35.0% | |
| AATAAGCGGAACACAACTTA+TGG | - | chr2.2:16011311-16011330 | None:intergenic | 35.0% | |
| AATACATTAAGACCCTGCAT+AGG | - | chr2.2:16011460-16011479 | None:intergenic | 35.0% | |
| AATGTAGATCCATGAATAGG+TGG | - | chr2.2:16013103-16013122 | None:intergenic | 35.0% | |
| AATTCCTGGTTATCAGTAAC+TGG | - | chr2.2:16012644-16012663 | None:intergenic | 35.0% | |
| ACTAAATTTCTCCTCCTAAC+CGG | - | chr2.2:16012749-16012768 | None:intergenic | 35.0% | |
| ACTTATCTTGAACCAATTCC+TGG | - | chr2.2:16012658-16012677 | None:intergenic | 35.0% | |
| AGAAAGACAAAAGAAGATCG+AGG | + | chr2.2:16012036-16012055 | MS.gene71871:CDS | 35.0% | |
| AGAAGTAATGACAGTAACGA+TGG | + | chr2.2:16012290-16012309 | MS.gene71871:CDS | 35.0% | |
| AGCATAACAACTTGGATAAG+GGG | + | chr2.2:16013125-16013144 | MS.gene71871:CDS | 35.0% | |
| AGTTACTGATAACCAGGAAT+TGG | + | chr2.2:16012643-16012662 | MS.gene71871:CDS | 35.0% | |
| ATCATCTACAATCTCCTCTT+TGG | - | chr2.2:16012255-16012274 | None:intergenic | 35.0% | |
| ATGTGAAAAGTCGTAAGAAG+CGG | + | chr2.2:16011769-16011788 | MS.gene71871:CDS | 35.0% | |
| CTTAGTCTAAACCACCAAAT+AGG | - | chr2.2:16011580-16011599 | None:intergenic | 35.0% | |
| GAAAACTTAAGAAAGTTCCG+AGG | + | chr2.2:16012554-16012573 | MS.gene71871:CDS | 35.0% | |
| GAAAGACAAAAGAAGATCGA+GGG | + | chr2.2:16012037-16012056 | MS.gene71871:CDS | 35.0% | |
| GAAATCACGTAGGAAGAAAA+AGG | + | chr2.2:16011893-16011912 | MS.gene71871:CDS | 35.0% | |
| GAAGTAATGACAGTAACGAT+GGG | + | chr2.2:16012291-16012310 | MS.gene71871:CDS | 35.0% | |
| GACAAGTGAATCTAAAAAGG+AGG | + | chr2.2:16012460-16012479 | MS.gene71871:CDS | 35.0% | |
| GATTACCTTAGAGGAATGTT+TGG | - | chr2.2:16010899-16010918 | None:intergenic | 35.0% | |
| GATTGGAAATGAAACCAAAG+AGG | + | chr2.2:16012238-16012257 | MS.gene71871:CDS | 35.0% | |
| GCTACTCATATCTCTAAGTT+TGG | - | chr2.2:16012423-16012442 | None:intergenic | 35.0% | |
| GGTCTAAAAGAAAAAGAGAG+CGG | + | chr2.2:16011730-16011749 | MS.gene71871:CDS | 35.0% | |
| GTGTATAATTCATGTTTCCC+AGG | + | chr2.2:16011122-16011141 | MS.gene71871:intron | 35.0% | |
| GTTCGTAAGTACATTCATCA+TGG | - | chr2.2:16012127-16012146 | None:intergenic | 35.0% | |
| GTTTAAGGATCTGTTTGGAT+TGG | + | chr2.2:16011206-16011225 | MS.gene71871:intron | 35.0% | |
| TCAACAGACTACATATGGAA+AGG | - | chr2.2:16011526-16011545 | None:intergenic | 35.0% | |
| TCAACTCAACAGACTACATA+TGG | - | chr2.2:16011531-16011550 | None:intergenic | 35.0% | |
| TCAGACTATGATGATTCCAA+AGG | + | chr2.2:16011672-16011691 | MS.gene71871:CDS | 35.0% | |
| TCGTAAGTACATTCATCATG+GGG | - | chr2.2:16012125-16012144 | None:intergenic | 35.0% | |
| TGATGAATGTACTTACGAAC+AGG | + | chr2.2:16012127-16012146 | MS.gene71871:CDS | 35.0% | |
| TGCAAAGAGTGGTAGATATA+GGG | + | chr2.2:16012073-16012092 | MS.gene71871:CDS | 35.0% | |
| TGCCACTGCTATTAATATTC+TGG | - | chr2.2:16013282-16013301 | None:intergenic | 35.0% | |
| TGGGACAAGTGAATCTAAAA+AGG | + | chr2.2:16012457-16012476 | MS.gene71871:CDS | 35.0% | |
| TTGTGAACTTAACTGACACT+GGG | + | chr2.2:16011100-16011119 | MS.gene71871:intron | 35.0% | |
| ! | AAATCTCTTCCACTGTTTCT+TGG | - | chr2.2:16012779-16012798 | None:intergenic | 35.0% |
| ! | AATCCACCTAGATTTGTTCT+CGG | - | chr2.2:16012171-16012190 | None:intergenic | 35.0% |
| ! | AATTCAGGCAAAGTACTAGA+CGG | + | chr2.2:16013361-16013380 | MS.gene71871:CDS | 35.0% |
| ! | ACTATTTTCATAAGCTACCC+TGG | - | chr2.2:16011346-16011365 | None:intergenic | 35.0% |
| ! | CTATTTGGTGGTTTAGACTA+AGG | + | chr2.2:16011578-16011597 | MS.gene71871:intron | 35.0% |
| ! | TGTAGAAGAAACTAGTTTGC+CGG | + | chr2.2:16012727-16012746 | MS.gene71871:CDS | 35.0% |
| ! | TTAGAAGAGACATTCAGGTT+GGG | + | chr2.2:16011955-16011974 | MS.gene71871:CDS | 35.0% |
| !!! | GTGTTTCTTTTTGAGTGAAG+TGG | - | chr2.2:16010875-16010894 | None:intergenic | 35.0% |
| AAAAAGGACAGGGAAAGGAA+TGG | - | chr2.2:16013530-16013549 | None:intergenic | 40.0% | |
| AAAAGGACAGGGAAAGGAAT+GGG | - | chr2.2:16013529-16013548 | None:intergenic | 40.0% | |
| AAGCTACCCTGGAGAATTTA+TGG | - | chr2.2:16011335-16011354 | None:intergenic | 40.0% | |
| AATCATGGCAAGGATCAGAT+GGG | - | chr2.2:16012937-16012956 | None:intergenic | 40.0% | |
| ACACTCCAAACATTCCTCTA+AGG | + | chr2.2:16010891-16010910 | MS.gene71871:CDS | 40.0% | |
| ACAGTGAATATGAGAGTTCC+AGG | + | chr2.2:16011994-16012013 | MS.gene71871:CDS | 40.0% | |
| AGACCTATCTTCAGAACTAG+AGG | - | chr2.2:16011715-16011734 | None:intergenic | 40.0% | |
| AGATAAGCATGATGAGACGA+AGG | + | chr2.2:16011869-16011888 | MS.gene71871:CDS | 40.0% | |
| AGCTAGAAAGAGAAACCTCA+CGG | - | chr2.2:16011653-16011672 | None:intergenic | 40.0% | |
| AGTAATGACAGTAACGATGG+GGG | + | chr2.2:16012293-16012312 | MS.gene71871:CDS | 40.0% | |
| AGTGAATATGAGAGTTCCAG+GGG | + | chr2.2:16011996-16012015 | MS.gene71871:CDS | 40.0% | |
| CAATCACCTCACACAACAAA+GGG | - | chr2.2:16011172-16011191 | None:intergenic | 40.0% | |
| CAGTGAATATGAGAGTTCCA+GGG | + | chr2.2:16011995-16012014 | MS.gene71871:CDS | 40.0% | |
| CAGTGGAAGAGATTTGAACT+TGG | + | chr2.2:16012784-16012803 | MS.gene71871:CDS | 40.0% | |
| CTATGATGATTCCAAAGGCA+TGG | + | chr2.2:16011677-16011696 | MS.gene71871:CDS | 40.0% | |
| CTTAGAAGAGACATTCAGGT+TGG | + | chr2.2:16011954-16011973 | MS.gene71871:CDS | 40.0% | |
| GAGAGAAGCAAGTGTTAGTT+CGG | + | chr2.2:16011920-16011939 | MS.gene71871:CDS | 40.0% | |
| GGAAGAGAAAAAAGGTGAAG+AGG | + | chr2.2:16011844-16011863 | MS.gene71871:CDS | 40.0% | |
| GTATGCCAGGAAGAGAAAAA+AGG | + | chr2.2:16011836-16011855 | MS.gene71871:CDS | 40.0% | |
| GTGCAAAGAGTGGTAGATAT+AGG | + | chr2.2:16012072-16012091 | MS.gene71871:CDS | 40.0% | |
| GTTGCTTATCCAAGAAACAG+TGG | + | chr2.2:16012767-16012786 | MS.gene71871:CDS | 40.0% | |
| GTTGTGAACTTAACTGACAC+TGG | + | chr2.2:16011099-16011118 | MS.gene71871:intron | 40.0% | |
| TAATACCATGACGAGCAATC+TGG | + | chr2.2:16012904-16012923 | MS.gene71871:CDS | 40.0% | |
| TCAATCACCTCACACAACAA+AGG | - | chr2.2:16011173-16011192 | None:intergenic | 40.0% | |
| TGTGAAAAGTCGTAAGAAGC+GGG | + | chr2.2:16011770-16011789 | MS.gene71871:CDS | 40.0% | |
| ! | AAGAAACTAGTTTGCCGGTT+AGG | + | chr2.2:16012732-16012751 | MS.gene71871:CDS | 40.0% |
| ! | GAATGTTCAGGTTAGCTACA+AGG | + | chr2.2:16013572-16013591 | MS.gene71871:intron | 40.0% |
| ! | GGCAAACTAGTTTCTTCTAC+AGG | - | chr2.2:16012728-16012747 | None:intergenic | 40.0% |
| ! | GGGTCACGTACAGTATTTTA+TGG | - | chr2.2:16013509-16013528 | None:intergenic | 40.0% |
| ! | TCTGCATCAGTAACCTTTTC+CGG | - | chr2.2:16012854-16012873 | None:intergenic | 40.0% |
| ! | TGGTTCTGTGAAGATTCAGA+TGG | + | chr2.2:16012820-16012839 | MS.gene71871:CDS | 40.0% |
| !! | AGCGACTTTGAAGTGAATCA+TGG | - | chr2.2:16012952-16012971 | None:intergenic | 40.0% |
| !! | CTTTGAAGTGAATCATGGCA+AGG | - | chr2.2:16012947-16012966 | None:intergenic | 40.0% |
| !! | TGTCCTCTAGTTCTGAAGAT+AGG | + | chr2.2:16011709-16011728 | MS.gene71871:CDS | 40.0% |
| !! | TTTTGTCCCTTTGTTGTGTG+AGG | + | chr2.2:16011163-16011182 | MS.gene71871:intron | 40.0% |
| !!! | CTTCACCTTTTTTCTCTTCC+TGG | - | chr2.2:16011844-16011863 | None:intergenic | 40.0% |
| AACTTTCCACGAGGAAGTTC+GGG | - | chr2.2:16012998-16013017 | None:intergenic | 45.0% | |
| ACGTGTCCGAGAACAAATCT+AGG | + | chr2.2:16012162-16012181 | MS.gene71871:CDS | 45.0% | |
| AGACGAAGGAGAAATCACGT+AGG | + | chr2.2:16011883-16011902 | MS.gene71871:CDS | 45.0% | |
| ATCATGGCAAGGATCAGATG+GGG | - | chr2.2:16012936-16012955 | None:intergenic | 45.0% | |
| ATGCACCAGAAGAGGAATTG+AGG | + | chr2.2:16012348-16012367 | MS.gene71871:CDS | 45.0% | |
| CAACTTTCCACGAGGAAGTT+CGG | - | chr2.2:16012999-16013018 | None:intergenic | 45.0% | |
| CAGGGGAAGAACAGAAAGAA+AGG | + | chr2.2:16012013-16012032 | MS.gene71871:CDS | 45.0% | |
| CAGTAACTGGTTGCTTCACT+TGG | - | chr2.2:16012631-16012650 | None:intergenic | 45.0% | |
| CTTTCTTTCTGTTCTTCCCC+TGG | - | chr2.2:16012015-16012034 | None:intergenic | 45.0% | |
| GAATCATGGCAAGGATCAGA+TGG | - | chr2.2:16012938-16012957 | None:intergenic | 45.0% | |
| GCAACCAGTTACTGATAACC+AGG | + | chr2.2:16012637-16012656 | MS.gene71871:CDS | 45.0% | |
| GGCTGATGAAGAAAGGAATG+CGG | + | chr2.2:16013234-16013253 | MS.gene71871:CDS | 45.0% | |
| GGGGATAAACCACCTATTCA+TGG | + | chr2.2:16013091-16013110 | MS.gene71871:CDS | 45.0% | |
| GTGGTTTAGACTAAGGGAAG+TGG | + | chr2.2:16011585-16011604 | MS.gene71871:intron | 45.0% | |
| TACACATGATGCACCAGAAG+AGG | + | chr2.2:16012340-16012359 | MS.gene71871:CDS | 45.0% | |
| TCATCATGGGGACTACTACA+AGG | - | chr2.2:16012113-16012132 | None:intergenic | 45.0% | |
| TGAATCCAGATTGCTCGTCA+TGG | - | chr2.2:16012912-16012931 | None:intergenic | 45.0% | |
| TGAGTGAGGCTGATGAAGAA+AGG | + | chr2.2:16013227-16013246 | MS.gene71871:CDS | 45.0% | |
| TGCACCAGAAGAGGAATTGA+GGG | + | chr2.2:16012349-16012368 | MS.gene71871:CDS | 45.0% | |
| TGGGCTTAGAAGAGACATTC+AGG | + | chr2.2:16011950-16011969 | MS.gene71871:CDS | 45.0% | |
| TGTCCGAGAACAAATCTAGG+TGG | + | chr2.2:16012165-16012184 | MS.gene71871:CDS | 45.0% | |
| TTTGCTCAAACTGAGAGCTC+TGG | - | chr2.2:16013393-16013412 | None:intergenic | 45.0% | |
| ! | AAACTAGTTTGCCGGTTAGG+AGG | + | chr2.2:16012735-16012754 | MS.gene71871:CDS | 45.0% |
| ! | AAAGTCGTAAGAAGCGGGTT+CGG | + | chr2.2:16011775-16011794 | MS.gene71871:CDS | 45.0% |
| ! | AGAAGTGGAAGTGCAAAGAG+TGG | + | chr2.2:16012062-16012081 | MS.gene71871:CDS | 45.0% |
| ! | CAGAAGTTTTTACGGTCGAC+TGG | - | chr2.2:16012586-16012605 | None:intergenic | 45.0% |
| ! | CTTAAGTTGCCTTCTAGCCA+AGG | - | chr2.2:16013622-16013641 | None:intergenic | 45.0% |
| !! | CATGGTTGTTGGCTTCAAAG+AGG | - | chr2.2:16012975-16012994 | None:intergenic | 45.0% |
| !!! | TCATATTTATTAATTTTAAT+CGG | + | chr2.2:16010962-16010981 | MS.gene71871:intron | 5.0% |
| AAAGAGAAACCTCACGGCGA+CGG | - | chr2.2:16011647-16011666 | None:intergenic | 50.0% | |
| AATGCTGCAGGGATGTTGAC+GGG | + | chr2.2:16013322-16013341 | MS.gene71871:CDS | 50.0% | |
| ACAATGACTGTGATGAGGGG+TGG | + | chr2.2:16013415-16013434 | MS.gene71871:CDS | 50.0% | |
| ACCTTCCAATGCACAGTTGC+CGG | + | chr2.2:16013204-16013223 | MS.gene71871:CDS | 50.0% | |
| ACGAGTCATGCAATGCTGCA+GGG | + | chr2.2:16013311-16013330 | MS.gene71871:CDS | 50.0% | |
| AGAAGAGGAATTGAGGGCTG+AGG | + | chr2.2:16012355-16012374 | MS.gene71871:CDS | 50.0% | |
| AGAAGATCGAGGGGAAGAAG+TGG | + | chr2.2:16012047-16012066 | MS.gene71871:CDS | 50.0% | |
| CAACGATGTGTCCATGCCTT+TGG | - | chr2.2:16011691-16011710 | None:intergenic | 50.0% | |
| CAATGCTGCAGGGATGTTGA+CGG | + | chr2.2:16013321-16013340 | MS.gene71871:CDS | 50.0% | |
| CGAACTTCCTCGTGGAAAGT+TGG | + | chr2.2:16012997-16013016 | MS.gene71871:CDS | 50.0% | |
| GTGAGGACTCTTTGTATGCC+AGG | + | chr2.2:16011823-16011842 | MS.gene71871:CDS | 50.0% | |
| TCAGCCCTCAATTCCTCTTC+TGG | - | chr2.2:16012356-16012375 | None:intergenic | 50.0% | |
| TCTTCATCAGCCTCACTCAC+CGG | - | chr2.2:16013226-16013245 | None:intergenic | 50.0% | |
| TGTGATGAGGGGTGGTGAAT+TGG | + | chr2.2:16013423-16013442 | MS.gene71871:CDS | 50.0% | |
| TTGTCCCAGCACGAACTTCA+AGG | - | chr2.2:16012445-16012464 | None:intergenic | 50.0% | |
| ! | AGTAGCCTTGAAGTTCGTGC+TGG | + | chr2.2:16012437-16012456 | MS.gene71871:CDS | 50.0% |
| ! | AGTGTTAGTTCGGTGAGCAG+TGG | + | chr2.2:16011930-16011949 | MS.gene71871:CDS | 50.0% |
| ! | ATACAGCTCTGACAGCAGTG+AGG | + | chr2.2:16011806-16011825 | MS.gene71871:CDS | 50.0% |
| ! | CCAAGGCAGGGGTTTTCTTA+GGG | - | chr2.2:16013605-16013624 | None:intergenic | 50.0% |
| ! | CTCAAACTGAGAGCTCTGGT+TGG | - | chr2.2:16013389-16013408 | None:intergenic | 50.0% |
| ! | GATTCAGATGGCTTGTGCAC+CGG | + | chr2.2:16012832-16012851 | MS.gene71871:CDS | 50.0% |
| ! | GTAGCCTTGAAGTTCGTGCT+GGG | + | chr2.2:16012438-16012457 | MS.gene71871:CDS | 50.0% |
| ! | GTGTTAGTTCGGTGAGCAGT+GGG | + | chr2.2:16011931-16011950 | MS.gene71871:CDS | 50.0% |
| ! | TAACGATGGGGGCACAAAGA+GGG | + | chr2.2:16012304-16012323 | MS.gene71871:CDS | 50.0% |
| ! | TCCTCGTGGAAAGTTGGTCT+TGG | + | chr2.2:16013003-16013022 | MS.gene71871:CDS | 50.0% |
| !! | ATTAGAGGAGTGCCTTCTGC+TGG | + | chr2.2:16013070-16013089 | MS.gene71871:CDS | 50.0% |
| !! | TTAGAGGAGTGCCTTCTGCT+GGG | + | chr2.2:16013071-16013090 | MS.gene71871:CDS | 50.0% |
| AAACCCCTGCCTTGGCTAGA+AGG | + | chr2.2:16013610-16013629 | MS.gene71871:CDS | 55.0% | |
| ACCGGCAACTGTGCATTGGA+AGG | - | chr2.2:16013208-16013227 | None:intergenic | 55.0% | |
| ACTCACCGGCAACTGTGCAT+TGG | - | chr2.2:16013212-16013231 | None:intergenic | 55.0% | |
| AGTTGCCTTCTAGCCAAGGC+AGG | - | chr2.2:16013618-16013637 | None:intergenic | 55.0% | |
| CCCTAAGAAAACCCCTGCCT+TGG | + | chr2.2:16013602-16013621 | MS.gene71871:CDS | 55.0% | |
| GACGAGTCATGCAATGCTGC+AGG | + | chr2.2:16013310-16013329 | MS.gene71871:CDS | 55.0% | |
| GAGGGGTGGTGAATTGGTAC+AGG | + | chr2.2:16013429-16013448 | MS.gene71871:CDS | 55.0% | |
| GCCAAGACCAACTTTCCACG+AGG | - | chr2.2:16013007-16013026 | None:intergenic | 55.0% | |
| GGAAGTTCGGGCATGGTTGT+TGG | - | chr2.2:16012986-16013005 | None:intergenic | 55.0% | |
| GGTGGTTTATCCCCAGCAGA+AGG | - | chr2.2:16013085-16013104 | None:intergenic | 55.0% | |
| GTTGCCTTCTAGCCAAGGCA+GGG | - | chr2.2:16013617-16013636 | None:intergenic | 55.0% | |
| TTGAGGGCTGAGGATGTGAC+AGG | + | chr2.2:16012365-16012384 | MS.gene71871:CDS | 55.0% | |
| TTGCCTTCTAGCCAAGGCAG+GGG | - | chr2.2:16013616-16013635 | None:intergenic | 55.0% | |
| ! | GATGGCTTGTGCACCGGAAA+AGG | + | chr2.2:16012838-16012857 | MS.gene71871:CDS | 55.0% |
| ! | GCCAAGGCAGGGGTTTTCTT+AGG | - | chr2.2:16013606-16013625 | None:intergenic | 55.0% |
| ! | GTAACGATGGGGGCACAAAG+AGG | + | chr2.2:16012303-16012322 | MS.gene71871:CDS | 55.0% |
| !! | TAGAGGAGTGCCTTCTGCTG+GGG | + | chr2.2:16013072-16013091 | MS.gene71871:CDS | 55.0% |
| ACCATGCCCGAACTTCCTCG+TGG | + | chr2.2:16012989-16013008 | MS.gene71871:CDS | 60.0% | |
| CGGTCGACTGGACTTGACCT+CGG | - | chr2.2:16012574-16012593 | None:intergenic | 60.0% | |
| TCCACGAGGAAGTTCGGGCA+TGG | - | chr2.2:16012993-16013012 | None:intergenic | 60.0% | |
| TGCACAGTTGCCGGTGAGTG+AGG | + | chr2.2:16013213-16013232 | MS.gene71871:CDS | 60.0% | |
| ! | TGGGGGCACAAAGAGGGAGT+TGG | + | chr2.2:16012310-16012329 | MS.gene71871:CDS | 60.0% |
| GAAGAAGGTCCGTCGCCGTG+AGG | + | chr2.2:16011635-16011654 | MS.gene71871:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 16010859 | 16013647 | 16010859 | ID=MS.gene71871 |
| chr2.2 | mRNA | 16010859 | 16013647 | 16010859 | ID=MS.gene71871.t1;Parent=MS.gene71871 |
| chr2.2 | exon | 16010859 | 16010912 | 16010859 | ID=MS.gene71871.t1.exon1;Parent=MS.gene71871.t1 |
| chr2.2 | CDS | 16010859 | 16010912 | 16010859 | ID=cds.MS.gene71871.t1;Parent=MS.gene71871.t1 |
| chr2.2 | exon | 16011594 | 16013450 | 16011594 | ID=MS.gene71871.t1.exon2;Parent=MS.gene71871.t1 |
| chr2.2 | CDS | 16011594 | 16013450 | 16011594 | ID=cds.MS.gene71871.t1;Parent=MS.gene71871.t1 |
| chr2.2 | exon | 16013582 | 16013647 | 16013582 | ID=MS.gene71871.t1.exon3;Parent=MS.gene71871.t1 |
| chr2.2 | CDS | 16013582 | 16013647 | 16013582 | ID=cds.MS.gene71871.t1;Parent=MS.gene71871.t1 |
| Gene Sequence |
| Protein sequence |
