Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77868.t1 | XP_013459230.1 | 94.4 | 391 | 21 | 1 | 3 | 392 | 1 | 391 | 2.50E-176 | 628.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77868.t1 | Q94CJ5 | 63.2 | 277 | 100 | 1 | 115 | 389 | 108 | 384 | 2.4e-95 | 350.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77868.t1 | A0A072UV54 | 94.4 | 391 | 21 | 1 | 3 | 392 | 1 | 391 | 1.8e-176 | 628.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene77868 | 0.821893 | 3.17E-53 | -1.69E-46 |
| MS.gene049173 | MS.gene77868 | 0.826337 | 2.87E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene77868 | 0.836582 | 8.60E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene77868 | 0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene77868 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene77868 | 0.809663 | 1.69E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene77868 | 0.814384 | 1.58E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene77868 | 0.830836 | 2.35E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene77868 | 0.830004 | 3.75E-55 | -1.69E-46 |
| MS.gene049614 | MS.gene77868 | 0.815577 | 8.61E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene77868 | 0.837588 | 4.76E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene77868 | 0.838403 | 2.94E-57 | -1.69E-46 |
| MS.gene049760 | MS.gene77868 | 0.808487 | 3.02E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene77868 | 0.826318 | 2.90E-54 | -1.69E-46 |
| MS.gene049828 | MS.gene77868 | 0.813169 | 2.93E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene77868 | 0.834981 | 2.19E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene77868 | 0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene77868 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene77868 | 0.803044 | 4.21E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene77868 | 0.811216 | 7.82E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene77868 | 0.85033 | 1.82E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene77868 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene77868 | 0.807258 | 5.52E-50 | -1.69E-46 |
| MS.gene05053 | MS.gene77868 | 0.805054 | 1.61E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene77868 | 0.800788 | 1.22E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene77868 | 0.883294 | 5.07E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene77868 | 0.886919 | 2.25E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene77868 | 0.850007 | 2.24E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene77868 | 0.817705 | 2.87E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene77868 | 0.866088 | 3.68E-65 | -1.69E-46 |
| MS.gene051228 | MS.gene77868 | 0.867452 | 1.35E-65 | -1.69E-46 |
| MS.gene051471 | MS.gene77868 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene77868 | 0.80297 | 4.36E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene77868 | 0.827419 | 1.58E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene77868 | 0.846185 | 2.55E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene77868 | 0.826843 | 2.17E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene77868 | 0.800742 | 1.25E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene77868 | 0.831808 | 1.35E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene77868 | 0.839649 | 1.40E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene77868 | 0.838936 | 2.14E-57 | -1.69E-46 |
| MS.gene052290 | MS.gene77868 | 0.873157 | 1.83E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene77868 | 0.855376 | 6.58E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene77868 | 0.836353 | 9.84E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene77868 | 0.824542 | 7.63E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene77868 | 0.857699 | 1.37E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene77868 | 0.831148 | 1.97E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene77868 | 0.83789 | 3.98E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene77868 | 0.801909 | 7.21E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene77868 | 0.812244 | 4.67E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene77868 | 0.811667 | 6.24E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene77868 | 0.889032 | 3.48E-73 | -1.69E-46 |
| MS.gene053103 | MS.gene77868 | 0.831976 | 1.23E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene77868 | 0.83201 | 1.21E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene77868 | 0.835062 | 2.09E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene77868 | 0.857964 | 1.14E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene77868 | 0.81207 | 5.10E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene77868 | 0.802067 | 6.69E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene77868 | 0.852336 | 4.94E-61 | -1.69E-46 |
| MS.gene053384 | MS.gene77868 | 0.826505 | 2.61E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene77868 | 0.800452 | 1.43E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene77868 | 0.853819 | 1.86E-61 | -1.69E-46 |
| MS.gene053915 | MS.gene77868 | 0.810042 | 1.40E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene77868 | 0.840582 | 7.97E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene77868 | 0.817422 | 3.32E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene77868 | 0.865665 | 5.01E-65 | -1.69E-46 |
| MS.gene054543 | MS.gene77868 | 0.802734 | 4.88E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene77868 | 0.813557 | 2.41E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene77868 | 0.843132 | 1.69E-58 | -1.69E-46 |
| MS.gene054802 | MS.gene77868 | 0.839425 | 1.60E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene77868 | 0.843191 | 1.63E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene77868 | 0.844342 | 8.02E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene77868 | 0.858816 | 6.36E-63 | -1.69E-46 |
| MS.gene055116 | MS.gene77868 | 0.820905 | 5.36E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene77868 | 0.831018 | 2.12E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene77868 | 0.879825 | 9.08E-70 | -1.69E-46 |
| MS.gene055277 | MS.gene77868 | 0.830149 | 3.46E-55 | -1.69E-46 |
| MS.gene055397 | MS.gene77868 | 0.867984 | 9.14E-66 | -1.69E-46 |
| MS.gene055412 | MS.gene77868 | 0.828191 | 1.03E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene77868 | 0.859997 | 2.81E-63 | -1.69E-46 |
| MS.gene055636 | MS.gene77868 | 0.80537 | 1.38E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene77868 | 0.818551 | 1.85E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene77868 | 0.844364 | 7.92E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene77868 | 0.863218 | 2.91E-64 | -1.69E-46 |
| MS.gene05602 | MS.gene77868 | 0.816848 | 4.48E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene77868 | 0.813765 | 2.17E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene77868 | 0.82872 | 7.69E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene77868 | 0.824196 | 9.20E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene77868 | 0.804881 | 1.75E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene77868 | 0.810082 | 1.38E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene77868 | 0.863753 | 1.99E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene77868 | 0.808451 | 3.08E-50 | -1.69E-46 |
| MS.gene056719 | MS.gene77868 | 0.818633 | 1.77E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene77868 | 0.814173 | 1.76E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene77868 | 0.828468 | 8.84E-55 | -1.69E-46 |
| MS.gene056903 | MS.gene77868 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene77868 | 0.806117 | 9.61E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene77868 | 0.80013 | 1.67E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene77868 | 0.811977 | 5.34E-51 | -1.69E-46 |
| MS.gene057123 | MS.gene77868 | 0.828833 | 7.22E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene77868 | 0.882803 | 7.67E-71 | -1.69E-46 |
| MS.gene057146 | MS.gene77868 | 0.830003 | 3.75E-55 | -1.69E-46 |
| MS.gene057295 | MS.gene77868 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene77868 | 0.822711 | 2.05E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene77868 | 0.818241 | 2.17E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene77868 | 0.837872 | 4.02E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene77868 | 0.81152 | 6.72E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene77868 | 0.805848 | 1.09E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene77868 | 0.868843 | 4.83E-66 | -1.69E-46 |
| MS.gene058130 | MS.gene77868 | 0.804391 | 2.21E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene77868 | 0.811332 | 7.38E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene77868 | 0.841315 | 5.12E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene77868 | 0.800005 | 1.77E-48 | -1.69E-46 |
| MS.gene058365 | MS.gene77868 | 0.82273 | 2.03E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene77868 | 0.811425 | 7.05E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene77868 | 0.8443 | 8.24E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene77868 | 0.857448 | 1.62E-62 | -1.69E-46 |
| MS.gene058748 | MS.gene77868 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene77868 | 0.813159 | 2.95E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene77868 | 0.803409 | 3.53E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene77868 | 0.802678 | 5.01E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene77868 | 0.857292 | 1.80E-62 | -1.69E-46 |
| MS.gene05934 | MS.gene77868 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene77868 | 0.804642 | 1.96E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene77868 | 0.840548 | 8.14E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene77868 | 0.806884 | 6.62E-50 | -1.69E-46 |
| MS.gene05959 | MS.gene77868 | 0.802939 | 4.42E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene77868 | 0.842553 | 2.41E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene77868 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene77868 | 0.859303 | 4.54E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene77868 | 0.872119 | 4.06E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene77868 | 0.870588 | 1.30E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene77868 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene77868 | 0.845156 | 4.84E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene77868 | 0.815252 | 1.02E-51 | -1.69E-46 |
| MS.gene059858 | MS.gene77868 | 0.80949 | 1.84E-50 | -1.69E-46 |
| MS.gene05986 | MS.gene77868 | 0.815563 | 8.67E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene77868 | 0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene77868 | 0.819311 | 1.24E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene77868 | 0.871039 | 9.26E-67 | -1.69E-46 |
| MS.gene059974 | MS.gene77868 | 0.81114 | 8.12E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene77868 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene77868 | 0.846841 | 1.69E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene77868 | 0.85816 | 9.97E-63 | -1.69E-46 |
| MS.gene060837 | MS.gene77868 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene77868 | 0.815216 | 1.04E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene77868 | 0.847412 | 1.18E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene77868 | 0.801962 | 7.03E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene77868 | -0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene77868 | 0.816062 | 6.71E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene77868 | 0.866309 | 3.13E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77868.t1 | MTR_3g033620 | 92.327 | 391 | 29 | 1 | 3 | 392 | 1 | 391 | 0.0 | 637 |
| MS.gene77868.t1 | MTR_0013s0150 | 75.779 | 289 | 68 | 1 | 105 | 391 | 92 | 380 | 1.26e-161 | 459 |
| MS.gene77868.t1 | MTR_4g077000 | 64.643 | 280 | 97 | 1 | 111 | 388 | 109 | 388 | 1.73e-131 | 382 |
| MS.gene77868.t1 | MTR_3g071970 | 35.616 | 292 | 175 | 5 | 108 | 388 | 427 | 716 | 9.08e-51 | 182 |
| MS.gene77868.t1 | MTR_2g084605 | 27.208 | 283 | 193 | 5 | 115 | 388 | 114 | 392 | 1.77e-29 | 118 |
| MS.gene77868.t1 | MTR_7g064130 | 29.210 | 291 | 185 | 8 | 113 | 388 | 164 | 448 | 7.01e-25 | 105 |
| MS.gene77868.t1 | MTR_7g074090 | 28.879 | 232 | 150 | 5 | 160 | 389 | 90 | 308 | 2.31e-22 | 97.1 |
| MS.gene77868.t1 | MTR_7g074090 | 29.004 | 231 | 149 | 5 | 160 | 388 | 90 | 307 | 1.04e-21 | 95.9 |
| MS.gene77868.t1 | MTR_7g074090 | 28.879 | 232 | 150 | 5 | 160 | 389 | 108 | 326 | 1.98e-21 | 95.5 |
| MS.gene77868.t1 | MTR_7g074070 | 29.437 | 231 | 148 | 5 | 160 | 388 | 101 | 318 | 3.95e-20 | 91.3 |
| MS.gene77868.t1 | MTR_2g081000 | 24.786 | 234 | 163 | 3 | 115 | 341 | 181 | 408 | 5.71e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77868.t1 | AT5G12470 | 64.014 | 289 | 102 | 1 | 103 | 389 | 96 | 384 | 1.24e-135 | 393 |
| MS.gene77868.t1 | AT3G56140 | 36.789 | 299 | 170 | 6 | 108 | 392 | 200 | 493 | 3.45e-54 | 187 |
| MS.gene77868.t1 | AT3G56140 | 36.789 | 299 | 170 | 6 | 108 | 392 | 419 | 712 | 6.03e-53 | 187 |
| MS.gene77868.t1 | AT3G56140 | 36.789 | 299 | 170 | 6 | 108 | 392 | 419 | 712 | 6.03e-53 | 187 |
| MS.gene77868.t1 | AT2G40400 | 36.789 | 299 | 170 | 6 | 108 | 392 | 410 | 703 | 8.85e-53 | 187 |
| MS.gene77868.t1 | AT2G40400 | 36.789 | 299 | 170 | 6 | 108 | 392 | 410 | 703 | 8.85e-53 | 187 |
| MS.gene77868.t1 | AT2G40400 | 36.735 | 245 | 137 | 5 | 108 | 338 | 410 | 650 | 1.70e-38 | 146 |
| MS.gene77868.t1 | AT5G22790 | 27.875 | 287 | 187 | 7 | 115 | 388 | 154 | 433 | 2.35e-27 | 112 |
| MS.gene77868.t1 | AT2G37860 | 28.520 | 277 | 175 | 8 | 126 | 388 | 165 | 432 | 6.55e-27 | 111 |
| MS.gene77868.t1 | AT2G37860 | 28.520 | 277 | 175 | 8 | 126 | 388 | 165 | 432 | 6.55e-27 | 111 |
| MS.gene77868.t1 | AT3G08640 | 29.310 | 232 | 147 | 5 | 164 | 391 | 107 | 325 | 1.14e-22 | 98.2 |
| MS.gene77868.t1 | AT3G08630 | 28.936 | 235 | 144 | 6 | 164 | 391 | 104 | 322 | 1.50e-22 | 97.8 |
| MS.gene77868.t1 | AT5G24690 | 25.833 | 240 | 153 | 6 | 115 | 341 | 180 | 407 | 2.40e-12 | 68.9 |
Find 119 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAAATTTGGAGGGTTTA+AGG | 0.142353 | 3.4:-25489289 | MS.gene77868:CDS |
| TCAGAACTGCTAATACTTAT+TGG | 0.149928 | 3.4:-25484815 | MS.gene77868:CDS |
| TTCAGATGGTTGTTAAAATT+TGG | 0.178114 | 3.4:-25489300 | MS.gene77868:CDS |
| CTTATTGCCAAATTCTTCTA+TGG | 0.222326 | 3.4:-25486494 | MS.gene77868:CDS |
| AATTATTGAGCAACGGATTC+TGG | 0.230169 | 3.4:-25484889 | MS.gene77868:CDS |
| GTTAAGGCGGGGCGGGTTCC+TGG | 0.231023 | 3.4:-25489366 | MS.gene77868:CDS |
| GGGAGTGGAGGTGGTGGTGG+TGG | 0.236269 | 3.4:-25489507 | MS.gene77868:CDS |
| AGGACATCCATAGAAGAATT+TGG | 0.239459 | 3.4:+25486487 | None:intergenic |
| CAGAACTGCTAATACTTATT+GGG | 0.243000 | 3.4:-25484814 | MS.gene77868:CDS |
| GGAGAGATTTCCGGCGGATT+TGG | 0.270043 | 3.4:-25489397 | MS.gene77868:CDS |
| TTGGTTAAGCCTTTATCTTC+TGG | 0.287578 | 3.4:+25484658 | None:intergenic |
| GGAAATGGAGGCGGGTTTCC+AGG | 0.300912 | 3.4:-25489528 | MS.gene77868:CDS |
| GTTACTTTATCTTAGGTAAC+AGG | 0.304911 | 3.4:-25486596 | MS.gene77868:intron |
| CATCTCTTATGCAGCGTAAC+GGG | 0.313556 | 3.4:-25486148 | MS.gene77868:intron |
| GTTCTTAACTAAGCTTGTTA+TGG | 0.322891 | 3.4:-25489244 | MS.gene77868:CDS |
| GGTGGGGACGACGGTGGAGG+TGG | 0.334482 | 3.4:-25489489 | MS.gene77868:CDS |
| CGACGGTGGAGGTGGGGAAG+AGG | 0.344446 | 3.4:-25489481 | MS.gene77868:CDS |
| AAATGATTTGGCATGAAAAT+AGG | 0.350205 | 3.4:+25489585 | None:intergenic |
| GGAGAATTATGCAAATGATT+TGG | 0.352004 | 3.4:+25489573 | None:intergenic |
| TAGGTAACAGGCATAGTAAC+AGG | 0.352113 | 3.4:-25486584 | MS.gene77868:CDS |
| AGAAGAGGCAATGCTGGTTC+TGG | 0.358747 | 3.4:-25489439 | MS.gene77868:CDS |
| GGATTTGGCTGTTGCTGTTA+AGG | 0.361357 | 3.4:-25489382 | MS.gene77868:CDS |
| CAGTTAGTATAAGTTTGTTT+TGG | 0.370260 | 3.4:+25484853 | None:intergenic |
| GGAGTGGAGGTGGTGGTGGT+GGG | 0.372420 | 3.4:-25489506 | MS.gene77868:CDS |
| CCAGGGAGTGGAGGTGGTGG+TGG | 0.377091 | 3.4:-25489510 | MS.gene77868:CDS |
| GCTACACTGGTTGAGATTAC+AGG | 0.377802 | 3.4:+25485639 | None:intergenic |
| CAAAACAAACTTATACTAAC+TGG | 0.384571 | 3.4:-25484852 | MS.gene77868:CDS |
| ATGTCTTTCTCAGCGGGAAA+TGG | 0.390107 | 3.4:-25489543 | MS.gene77868:CDS |
| ATCTCAACCAGTGTAGCATA+TGG | 0.402251 | 3.4:-25485633 | MS.gene77868:CDS |
| GGGTTTCCAGGGAGTGGAGG+TGG | 0.402523 | 3.4:-25489516 | MS.gene77868:CDS |
| TGTTGCTGTTAAGGCGGGGC+GGG | 0.402815 | 3.4:-25489373 | MS.gene77868:CDS |
| GAGGTGGGGAAGAGGAAGAA+AGG | 0.408212 | 3.4:-25489473 | MS.gene77868:CDS |
| GGTTTCTCAACAGGTGGCTT+TGG | 0.409770 | 3.4:-25486277 | MS.gene77868:intron |
| TTGGCTGTTGCTGTTAAGGC+GGG | 0.411375 | 3.4:-25489378 | MS.gene77868:CDS |
| TTTCCAGGGAGTGGAGGTGG+TGG | 0.425609 | 3.4:-25489513 | MS.gene77868:CDS |
| TCTCAACAGGTGGCTTTGGC+AGG | 0.431996 | 3.4:-25486273 | MS.gene77868:intron |
| TGGGGACGACGGTGGAGGTG+GGG | 0.432293 | 3.4:-25489487 | MS.gene77868:CDS |
| TAGGTCGATGGAGAGATTTC+CGG | 0.435176 | 3.4:-25489406 | MS.gene77868:CDS |
| GGTGGTGGGGACGACGGTGG+AGG | 0.436244 | 3.4:-25489492 | MS.gene77868:CDS |
| GGCGGGTTTCCAGGGAGTGG+AGG | 0.439477 | 3.4:-25489519 | MS.gene77868:CDS |
| GAGTGGAGGTGGTGGTGGTG+GGG | 0.445313 | 3.4:-25489505 | MS.gene77868:CDS |
| AAATCATTTGCATAATTCTC+CGG | 0.448690 | 3.4:-25489571 | MS.gene77868:CDS |
| AGGGTTTAAGGAAAGGTTGT+TGG | 0.448786 | 3.4:-25489277 | MS.gene77868:CDS |
| TTCTCAGCGGGAAATGGAGG+CGG | 0.453413 | 3.4:-25489537 | MS.gene77868:CDS |
| GGCAATGCTGGTTCTGGCTG+AGG | 0.462988 | 3.4:-25489433 | MS.gene77868:CDS |
| GAACAAGTGTGTTGAAATGT+TGG | 0.464025 | 3.4:+25489740 | None:intergenic |
| GTGGGGACGACGGTGGAGGT+GGG | 0.464289 | 3.4:-25489488 | MS.gene77868:CDS |
| AGTTGGAACCGGTGCTTCAC+TGG | 0.464486 | 3.4:-25486111 | MS.gene77868:intron |
| AGAAGAATGTAGAAACTTCA+TGG | 0.468874 | 3.4:+25489640 | None:intergenic |
| ACAAAGAATAGGTGCTATAG+TGG | 0.469138 | 3.4:-25486232 | MS.gene77868:intron |
| ATAAGTCCAGCACTAATTGC+AGG | 0.470510 | 3.4:+25486512 | None:intergenic |
| GGTGGTGGTGGGGACGACGG+TGG | 0.471018 | 3.4:-25489495 | MS.gene77868:CDS |
| GGCAGAGGAATGATTGAGCT+TGG | 0.471795 | 3.4:+25489614 | None:intergenic |
| AGCCTTCTGTGCATTGATCA+AGG | 0.477024 | 3.4:+25485692 | None:intergenic |
| ATGCTGGTTCTGGCTGAGGC+TGG | 0.478438 | 3.4:-25489429 | MS.gene77868:CDS |
| AGAAAATTTCACAAAAGAGA+TGG | 0.479864 | 3.4:-25487424 | MS.gene77868:CDS |
| CCACCACCACCTCCACTCCC+TGG | 0.480197 | 3.4:+25489510 | None:intergenic |
| TACTCAAATGGCTATGGCTA+TGG | 0.488749 | 3.4:-25489772 | None:intergenic |
| TATACACTTCTACAAAGAAT+AGG | 0.490986 | 3.4:-25486243 | MS.gene77868:CDS |
| GGGGCAAAGCTGTTCGTAGT+TGG | 0.495711 | 3.4:-25486128 | MS.gene77868:CDS |
| AAATAGAGAAGAGGCAATGC+TGG | 0.496130 | 3.4:-25489445 | MS.gene77868:CDS |
| GTTTCCATGTCTTTCTCAGC+GGG | 0.498178 | 3.4:-25489549 | MS.gene77868:CDS |
| CGTGTTTACCAGTGAAGCAC+CGG | 0.499717 | 3.4:+25486103 | None:intergenic |
| GGTTGGAGTCCAGAAGATAA+AGG | 0.501111 | 3.4:-25484667 | MS.gene77868:CDS |
| GGAGGCGGGTTTCCAGGGAG+TGG | 0.502191 | 3.4:-25489522 | MS.gene77868:CDS |
| AAGCTGTTCGTAGTTGGAAC+CGG | 0.502348 | 3.4:-25486122 | MS.gene77868:CDS |
| GCTGAGAAAGACATGGAAAC+CGG | 0.503241 | 3.4:+25489552 | None:intergenic |
| CCTCCTCCTGCAATTAGTGC+TGG | 0.506534 | 3.4:-25486518 | MS.gene77868:CDS |
| GGTGGTGGTGGTGGGGACGA+CGG | 0.507596 | 3.4:-25489498 | MS.gene77868:CDS |
| AGATGGTTGTTAAAATTTGG+AGG | 0.512940 | 3.4:-25489297 | MS.gene77868:CDS |
| AGGTGGGGAAGAGGAAGAAA+GGG | 0.513416 | 3.4:-25489472 | MS.gene77868:CDS |
| GTAAGAGAAACAGTGGGAGC+AGG | 0.517008 | 3.4:+25486542 | None:intergenic |
| GGCTGAGGCTGGTAGGTCGA+TGG | 0.519761 | 3.4:-25489418 | MS.gene77868:CDS |
| GAAATGGAGGCGGGTTTCCA+GGG | 0.525470 | 3.4:-25489527 | MS.gene77868:CDS |
| GAAAATAGGTGCAGAGGCAG+AGG | 0.530646 | 3.4:+25489599 | None:intergenic |
| GATGGTTGTTAAAATTTGGA+GGG | 0.533288 | 3.4:-25489296 | MS.gene77868:CDS |
| TTTGGCTGTTGCTGTTAAGG+CGG | 0.535226 | 3.4:-25489379 | MS.gene77868:CDS |
| AATTTGGAGGGTTTAAGGAA+AGG | 0.537593 | 3.4:-25489284 | MS.gene77868:CDS |
| ATCAGGTATCAAGTACTAGC+AGG | 0.538106 | 3.4:-25484912 | MS.gene77868:intron |
| TCTCAATACTCAAATGGCTA+TGG | 0.538146 | 3.4:-25489778 | None:intergenic |
| AGCAACGGATTCTGGAACCA+TGG | 0.539826 | 3.4:-25484881 | MS.gene77868:CDS |
| TCTCAACCAGTGTAGCATAT+GGG | 0.543058 | 3.4:-25485632 | MS.gene77868:CDS |
| TGGTAGTAGTTAGCAACCTC+AGG | 0.544386 | 3.4:-25485602 | MS.gene77868:intron |
| GGGTTCCTGGTTCGATAGTG+AGG | 0.546193 | 3.4:-25489353 | MS.gene77868:CDS |
| TGTAGCTTGGTAAAGAAGAA+TGG | 0.548341 | 3.4:+25489676 | None:intergenic |
| TCTCAGCGGGAAATGGAGGC+GGG | 0.552343 | 3.4:-25489536 | MS.gene77868:CDS |
| AGGCTGCTGCAGAGTTGGAG+CGG | 0.552978 | 3.4:-25487452 | MS.gene77868:CDS |
| GAATGTAGAAACTTCATGGC+GGG | 0.554672 | 3.4:+25489644 | None:intergenic |
| GTAAATCCCATATGCTACAC+TGG | 0.555578 | 3.4:+25485626 | None:intergenic |
| TGGTTCTGGCTGAGGCTGGT+AGG | 0.562509 | 3.4:-25489425 | MS.gene77868:CDS |
| ATGGCTACAGCGGTAGACAT+TGG | 0.572337 | 3.4:+25489695 | None:intergenic |
| CCATCTCTTATGCAGCGTAA+CGG | 0.578736 | 3.4:-25486149 | MS.gene77868:intron |
| AAGGGATAGAAATAGAGAAG+AGG | 0.582114 | 3.4:-25489454 | MS.gene77868:CDS |
| CTGTTGCTGTTAAGGCGGGG+CGG | 0.583576 | 3.4:-25489374 | MS.gene77868:CDS |
| TATATCTTTGAGTAGGTGGG+TGG | 0.584566 | 3.4:-25484703 | MS.gene77868:intron |
| AGGAGGTGTAAGAGAAACAG+TGG | 0.591590 | 3.4:+25486535 | None:intergenic |
| AACCTCCTCACTATCGAACC+AGG | 0.592357 | 3.4:+25489348 | None:intergenic |
| TAGCAGGAATTATTGAGCAA+CGG | 0.592464 | 3.4:-25484896 | MS.gene77868:CDS |
| AGAACTGCTAATACTTATTG+GGG | 0.592650 | 3.4:-25484813 | MS.gene77868:CDS |
| TCTTTCTCAGCGGGAAATGG+AGG | 0.595170 | 3.4:-25489540 | MS.gene77868:CDS |
| ATCTCTTATGCAGCGTAACG+GGG | 0.596886 | 3.4:-25486147 | MS.gene77868:intron |
| TGCCTTGATCAATGCACAGA+AGG | 0.602798 | 3.4:-25485694 | MS.gene77868:CDS |
| TTCCTGGTTCGATAGTGAGG+AGG | 0.603087 | 3.4:-25489350 | MS.gene77868:CDS |
| CCAGCACTAATTGCAGGAGG+AGG | 0.611345 | 3.4:+25486518 | None:intergenic |
| ACAGCAACAGCCAAATCCGC+CGG | 0.617065 | 3.4:+25489387 | None:intergenic |
| GGTTTCCATGTCTTTCTCAG+CGG | 0.622323 | 3.4:-25489550 | MS.gene77868:CDS |
| TGGCATGAAAATAGGTGCAG+AGG | 0.627627 | 3.4:+25489593 | None:intergenic |
| GTGTGTTGAAATGTTGGAGA+AGG | 0.628543 | 3.4:+25489746 | None:intergenic |
| TGTTGTTGTCATCTTCACCA+AGG | 0.629999 | 3.4:-25489217 | MS.gene77868:intron |
| TGTAGCATATGGGATTTACA+TGG | 0.636490 | 3.4:-25485622 | MS.gene77868:CDS |
| ATTTCCCGCTGAGAAAGACA+TGG | 0.636719 | 3.4:+25489545 | None:intergenic |
| CGGGCTGTGATGATGTAGCT+TGG | 0.638052 | 3.4:+25489663 | None:intergenic |
| TGGCTGTTGCTGTTAAGGCG+GGG | 0.645154 | 3.4:-25489377 | MS.gene77868:CDS |
| GATTACAGGTAAATTCTCAA+CGG | 0.665828 | 3.4:+25485653 | None:intergenic |
| GGAGGTGTAAGAGAAACAGT+GGG | 0.667274 | 3.4:+25486536 | None:intergenic |
| GTCGATGGAGAGATTTCCGG+CGG | 0.669889 | 3.4:-25489403 | MS.gene77868:CDS |
| GTAAAGAAGAATGGCTACAG+CGG | 0.675378 | 3.4:+25489685 | None:intergenic |
| AGTCCAGCACTAATTGCAGG+AGG | 0.693475 | 3.4:+25486515 | None:intergenic |
| AGAATGTAGAAACTTCATGG+CGG | 0.765119 | 3.4:+25489643 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTAAAATAAAATTTTAG+TGG | + | chr3.4:25485897-25485916 | None:intergenic | 10.0% |
| !!! | ATAATATGTTTTTTTTTGAA+AGG | - | chr3.4:25486247-25486266 | MS.gene77868:CDS | 10.0% |
| !!! | ATTTAGAATTGATTTTTTTT+GGG | - | chr3.4:25489144-25489163 | MS.gene77868:intron | 10.0% |
| !!! | GATTTTTTATTTTTCATTTA+AGG | - | chr3.4:25489479-25489498 | MS.gene77868:CDS | 10.0% |
| !!! | GCTTTTATATATTATTTTTT+TGG | + | chr3.4:25486186-25486205 | None:intergenic | 10.0% |
| !!! | TAGTTTAATTTTTTATTCTT+AGG | + | chr3.4:25485987-25486006 | None:intergenic | 10.0% |
| !! | AATACACTAAATTGTAATAA+TGG | + | chr3.4:25485243-25485262 | None:intergenic | 15.0% |
| !! | TAACTTCAACAAATTATAAA+GGG | - | chr3.4:25486311-25486330 | MS.gene77868:intron | 15.0% |
| !! | TTATAATTGTAGATTATAGA+TGG | - | chr3.4:25488496-25488515 | MS.gene77868:intron | 15.0% |
| !! | TTCTAAATCTATGTTATAAA+TGG | + | chr3.4:25489132-25489151 | None:intergenic | 15.0% |
| !!! | AAAAGCATATAATAACTTTT+AGG | + | chr3.4:25489685-25489704 | None:intergenic | 15.0% |
| !!! | ATTTTATACTGAATATGAAA+AGG | + | chr3.4:25488010-25488029 | None:intergenic | 15.0% |
| !!! | GATTTAGAATTGATTTTTTT+TGG | - | chr3.4:25489143-25489162 | MS.gene77868:intron | 15.0% |
| !!! | GTTTTTAGATAAATCAATAA+GGG | - | chr3.4:25486343-25486362 | MS.gene77868:intron | 15.0% |
| !!! | TCAAATTGTTATTAATCATT+AGG | - | chr3.4:25487125-25487144 | MS.gene77868:intron | 15.0% |
| !! | AAAAATCAAATATTTACCTC+AGG | + | chr3.4:25489466-25489485 | None:intergenic | 20.0% |
| !! | AACTTCAACAAATTATAAAG+GGG | - | chr3.4:25486312-25486331 | MS.gene77868:intron | 20.0% |
| !! | AAGACTATAAAATAGTAACT+AGG | + | chr3.4:25485296-25485315 | None:intergenic | 20.0% |
| !! | AGTCGAAACAAAATATATAA+AGG | - | chr3.4:25486288-25486307 | MS.gene77868:intron | 20.0% |
| !! | CTTAGGTTTATAAGTTAAAA+TGG | + | chr3.4:25485970-25485989 | None:intergenic | 20.0% |
| !! | GTAACTTCAACAAATTATAA+AGG | - | chr3.4:25486310-25486329 | MS.gene77868:intron | 20.0% |
| !! | TAAAATAAAAGTGAGAATGA+GGG | - | chr3.4:25486779-25486798 | MS.gene77868:intron | 20.0% |
| !! | TAAATCAATAAGGGTAAAAT+TGG | - | chr3.4:25486352-25486371 | MS.gene77868:intron | 20.0% |
| !! | TAAATGTAAAATGACACAAA+AGG | - | chr3.4:25485726-25485745 | MS.gene77868:intron | 20.0% |
| !! | TAAGAATGTTTCTTGTTAAA+TGG | - | chr3.4:25485374-25485393 | MS.gene77868:intron | 20.0% |
| !! | TTTATATCCTCAAATTATTG+TGG | - | chr3.4:25489391-25489410 | MS.gene77868:CDS | 20.0% |
| !!! | AAATTTTAGAACAAGCTAAA+AGG | + | chr3.4:25488379-25488398 | None:intergenic | 20.0% |
| !!! | ATATTGTTACGCTTTTTTTA+AGG | + | chr3.4:25486145-25486164 | None:intergenic | 20.0% |
| !!! | GGTTTTTAGATAAATCAATA+AGG | - | chr3.4:25486342-25486361 | MS.gene77868:intron | 20.0% |
| !!! | TATATATTATTTTTTTGGGC+TGG | + | chr3.4:25486181-25486200 | None:intergenic | 20.0% |
| !!! | TATTGTTACGCTTTTTTTAA+GGG | + | chr3.4:25486144-25486163 | None:intergenic | 20.0% |
| !!! | TCACTCTTTTAAGTAAATAA+TGG | + | chr3.4:25486910-25486929 | None:intergenic | 20.0% |
| !!! | TCTATAGATCAACTTAATTT+TGG | + | chr3.4:25487420-25487439 | None:intergenic | 20.0% |
| !!! | TGTTTTTTGGTAATTTGTAA+AGG | + | chr3.4:25486663-25486682 | None:intergenic | 20.0% |
| ! | AAAATTGCAATCAAAATCGA+TGG | + | chr3.4:25489176-25489195 | None:intergenic | 25.0% |
| ! | AAAGAATGAATGATGAAGAT+TGG | + | chr3.4:25487679-25487698 | None:intergenic | 25.0% |
| ! | AAATCATTTGCATAATTCTC+CGG | - | chr3.4:25484856-25484875 | MS.gene77868:CDS | 25.0% |
| ! | AAATTATAAAGGGGTAGAAT+TGG | - | chr3.4:25486321-25486340 | MS.gene77868:intron | 25.0% |
| ! | AACACAATAAGTATCATTTG+CGG | + | chr3.4:25487269-25487288 | None:intergenic | 25.0% |
| ! | AAGGAAATAACTATTTGACT+TGG | + | chr3.4:25488241-25488260 | None:intergenic | 25.0% |
| ! | AAGTAACAAACTGAATAAGA+TGG | + | chr3.4:25487818-25487837 | None:intergenic | 25.0% |
| ! | AAGTTTGTAGGACTTATATT+TGG | - | chr3.4:25486694-25486713 | MS.gene77868:intron | 25.0% |
| ! | AGAAAATTAGCCATATGTAA+TGG | - | chr3.4:25486935-25486954 | MS.gene77868:intron | 25.0% |
| ! | AGAAAATTTCACAAAAGAGA+TGG | - | chr3.4:25487003-25487022 | MS.gene77868:intron | 25.0% |
| ! | ATTCTCGTGCATATATTATT+CGG | - | chr3.4:25488905-25488924 | MS.gene77868:intron | 25.0% |
| ! | CAAAACAAACTTATACTAAC+TGG | - | chr3.4:25489575-25489594 | MS.gene77868:CDS | 25.0% |
| ! | GTAAAATAAAAGTGAGAATG+AGG | - | chr3.4:25486778-25486797 | MS.gene77868:intron | 25.0% |
| ! | TATACACTTCTACAAAGAAT+AGG | - | chr3.4:25488184-25488203 | MS.gene77868:intron | 25.0% |
| ! | TCAAAGTTAGTACTTCATAT+AGG | - | chr3.4:25485561-25485580 | MS.gene77868:intron | 25.0% |
| ! | TTATTGTGTTAAATCAAAGC+AGG | - | chr3.4:25487279-25487298 | MS.gene77868:intron | 25.0% |
| ! | TTCAGATGGTTGTTAAAATT+TGG | - | chr3.4:25485127-25485146 | MS.gene77868:intron | 25.0% |
| ! | TTGATTAATTACTAAGTGTC+TGG | + | chr3.4:25488883-25488902 | None:intergenic | 25.0% |
| ! | TTTGGTATATATCTTTGAGT+AGG | - | chr3.4:25489717-25489736 | MS.gene77868:CDS | 25.0% |
| !! | AAATGATTTGGCATGAAAAT+AGG | + | chr3.4:25484845-25484864 | None:intergenic | 25.0% |
| !! | AGTTATTTCCTTATAAGTGA+AGG | - | chr3.4:25488249-25488268 | MS.gene77868:intron | 25.0% |
| !! | AGTTCAAGTTCTTAGTAATT+CGG | - | chr3.4:25487318-25487337 | MS.gene77868:intron | 25.0% |
| !! | ATATATTATTCGGACTTTTG+AGG | - | chr3.4:25488915-25488934 | MS.gene77868:intron | 25.0% |
| !! | CAACCATAATTAATCTTTTC+CGG | + | chr3.4:25487604-25487623 | None:intergenic | 25.0% |
| !! | CAATGTAGTACATTTTATGT+CGG | - | chr3.4:25487626-25487645 | MS.gene77868:intron | 25.0% |
| !! | GATAAGTTAATTGAAGTGTT+TGG | - | chr3.4:25485678-25485697 | MS.gene77868:CDS | 25.0% |
| !! | GTAATAATGGAAATAAACCT+TGG | + | chr3.4:25485230-25485249 | None:intergenic | 25.0% |
| !! | TAGATCAACTTAATTTTGGA+AGG | + | chr3.4:25487416-25487435 | None:intergenic | 25.0% |
| !! | TATAGTGTGAAAGGAATTTT+AGG | - | chr3.4:25485321-25485340 | MS.gene77868:intron | 25.0% |
| !! | TATATTATTCGGACTTTTGA+GGG | - | chr3.4:25488916-25488935 | MS.gene77868:intron | 25.0% |
| !! | TGACAAAAAATAGTTCTGTT+TGG | + | chr3.4:25486490-25486509 | None:intergenic | 25.0% |
| !!! | ATGTTCTCGAACTTTTTTTA+TGG | + | chr3.4:25487075-25487094 | None:intergenic | 25.0% |
| !!! | ATTTTGTAGTAGTTTGTTGA+AGG | + | chr3.4:25488859-25488878 | None:intergenic | 25.0% |
| !!! | CAGTTAGTATAAGTTTGTTT+TGG | + | chr3.4:25489577-25489596 | None:intergenic | 25.0% |
| !!! | CTCTATTTTACTTGTTTTTG+AGG | + | chr3.4:25485411-25485430 | None:intergenic | 25.0% |
| !!! | GCAATATTTTTTATTCAGGT+TGG | - | chr3.4:25488695-25488714 | MS.gene77868:intron | 25.0% |
| !!! | GCTTGCAATATTTTTTATTC+AGG | - | chr3.4:25488691-25488710 | MS.gene77868:intron | 25.0% |
| !!! | TCAGTTTGTTACTTTATCTT+AGG | - | chr3.4:25487824-25487843 | MS.gene77868:intron | 25.0% |
| !!! | TCTTTAAAGTATAGTGTGAA+AGG | - | chr3.4:25485312-25485331 | MS.gene77868:intron | 25.0% |
| !!! | TGCATTTTAGGATTTAAGTT+GGG | + | chr3.4:25488983-25489002 | None:intergenic | 25.0% |
| !!! | TTTAAGCTGATGATGTTTTT+TGG | + | chr3.4:25486676-25486695 | None:intergenic | 25.0% |
| !!! | TTTTTTATTCAGGTTGGTAT+AGG | - | chr3.4:25488701-25488720 | MS.gene77868:intron | 25.0% |
| AAAACTCATCATGCCAAATA+AGG | + | chr3.4:25486830-25486849 | None:intergenic | 30.0% | |
| AAAAGTTCGAGAACATTTCT+TGG | - | chr3.4:25487079-25487098 | MS.gene77868:intron | 30.0% | |
| AAAATCGCAATCAAAATCGA+TGG | + | chr3.4:25489072-25489091 | None:intergenic | 30.0% | |
| AACAGCTGATCATATATGTT+TGG | + | chr3.4:25488120-25488139 | None:intergenic | 30.0% | |
| ACTAACTTTGACACACAAAT+TGG | + | chr3.4:25485552-25485571 | None:intergenic | 30.0% | |
| AGAACTGCTAATACTTATTG+GGG | - | chr3.4:25489614-25489633 | MS.gene77868:CDS | 30.0% | |
| AGAAGAATGTAGAAACTTCA+TGG | + | chr3.4:25484790-25484809 | None:intergenic | 30.0% | |
| AGATGGTTGTTAAAATTTGG+AGG | - | chr3.4:25485130-25485149 | MS.gene77868:intron | 30.0% | |
| AGATTCCAACTTTGTAACTT+TGG | + | chr3.4:25486861-25486880 | None:intergenic | 30.0% | |
| ATCATCAGCTTAAAGTTTGT+AGG | - | chr3.4:25486682-25486701 | MS.gene77868:intron | 30.0% | |
| ATTATGAATGTCGGCATTTA+AGG | + | chr3.4:25487565-25487584 | None:intergenic | 30.0% | |
| CAACTTAAATCCTAAAATGC+AGG | - | chr3.4:25488982-25489001 | MS.gene77868:intron | 30.0% | |
| CAGAACTGCTAATACTTATT+GGG | - | chr3.4:25489613-25489632 | MS.gene77868:CDS | 30.0% | |
| CTGATCATATATGTTTGGAT+CGG | + | chr3.4:25488115-25488134 | None:intergenic | 30.0% | |
| CTTATTGCCAAATTCTTCTA+TGG | - | chr3.4:25487933-25487952 | MS.gene77868:intron | 30.0% | |
| GAATTACTAAGAACTTGAAC+TGG | + | chr3.4:25487319-25487338 | None:intergenic | 30.0% | |
| GACAAGATATCCATTACATA+TGG | + | chr3.4:25486948-25486967 | None:intergenic | 30.0% | |
| GATCAGCTGTTAATGAATTT+CGG | - | chr3.4:25488129-25488148 | MS.gene77868:intron | 30.0% | |
| GATGGTTGTTAAAATTTGGA+GGG | - | chr3.4:25485131-25485150 | MS.gene77868:intron | 30.0% | |
| GATTACAGGTAAATTCTCAA+CGG | + | chr3.4:25488777-25488796 | None:intergenic | 30.0% | |
| GCATTCATGTTAGAAATTCA+AGG | + | chr3.4:25488673-25488692 | None:intergenic | 30.0% | |
| GGAGAATTATGCAAATGATT+TGG | + | chr3.4:25484857-25484876 | None:intergenic | 30.0% | |
| GTATATATCTTTGAGTAGGT+GGG | - | chr3.4:25489721-25489740 | MS.gene77868:CDS | 30.0% | |
| GTTAAAATTTGGAGGGTTTA+AGG | - | chr3.4:25485138-25485157 | MS.gene77868:intron | 30.0% | |
| TAAATCAAAGCAGGAAACAA+GGG | - | chr3.4:25487288-25487307 | MS.gene77868:intron | 30.0% | |
| TAGCCGGAAAAGATTAATTA+TGG | - | chr3.4:25487598-25487617 | MS.gene77868:intron | 30.0% | |
| TATGCAAAATGTACACTCTT+GGG | - | chr3.4:25485490-25485509 | MS.gene77868:intron | 30.0% | |
| TCAGAACTGCTAATACTTAT+TGG | - | chr3.4:25489612-25489631 | MS.gene77868:CDS | 30.0% | |
| TGGAAGGGAATAGAAAAATT+GGG | + | chr3.4:25489270-25489289 | None:intergenic | 30.0% | |
| TTAAATCAAAGCAGGAAACA+AGG | - | chr3.4:25487287-25487306 | MS.gene77868:intron | 30.0% | |
| TTATGCAAAATGTACACTCT+TGG | - | chr3.4:25485489-25485508 | MS.gene77868:intron | 30.0% | |
| TTGGAAGGGAATAGAAAAAT+TGG | + | chr3.4:25489271-25489290 | None:intergenic | 30.0% | |
| ! | AAAAGCTAAAAGCTCTTTTG+AGG | - | chr3.4:25486532-25486551 | MS.gene77868:CDS | 30.0% |
| ! | AAGGATTTGTTTATGTGATC+AGG | - | chr3.4:25489498-25489517 | MS.gene77868:CDS | 30.0% |
| ! | ATAATTAATCTTTTCCGGCT+AGG | + | chr3.4:25487599-25487618 | None:intergenic | 30.0% |
| ! | ATATTATTCGGACTTTTGAG+GGG | - | chr3.4:25488917-25488936 | MS.gene77868:intron | 30.0% |
| ! | CTTACACAGATGTTTTCATT+CGG | - | chr3.4:25489364-25489383 | MS.gene77868:CDS | 30.0% |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | - | chr3.4:25485690-25485709 | MS.gene77868:CDS | 30.0% |
| ! | GACTTTTGTAGAATCGATAT+AGG | + | chr3.4:25489206-25489225 | None:intergenic | 30.0% |
| ! | GTTACTTTATCTTAGGTAAC+AGG | - | chr3.4:25487831-25487850 | MS.gene77868:intron | 30.0% |
| ! | GTTTTCAACATGAACATTTG+CGG | - | chr3.4:25487238-25487257 | MS.gene77868:intron | 30.0% |
| ! | TAATTTGTAAAGGCGACAAA+AGG | + | chr3.4:25486653-25486672 | None:intergenic | 30.0% |
| ! | TGGATATCTTGTCTATTTTC+AGG | - | chr3.4:25486955-25486974 | MS.gene77868:intron | 30.0% |
| ! | TTTTGCCACATTATGAATGT+CGG | + | chr3.4:25487574-25487593 | None:intergenic | 30.0% |
| !! | CGATGGATTTTGTCTATTTT+GGG | + | chr3.4:25489055-25489074 | None:intergenic | 30.0% |
| !! | GTTCTTAACTAAGCTTGTTA+TGG | - | chr3.4:25485183-25485202 | MS.gene77868:intron | 30.0% |
| !! | TAACAGGTTTTGTACTAGTT+TGG | - | chr3.4:25487859-25487878 | MS.gene77868:intron | 30.0% |
| !! | TCGATGGATTTTGTCTATTT+TGG | + | chr3.4:25489056-25489075 | None:intergenic | 30.0% |
| !!! | CTGCATTTTAGGATTTAAGT+TGG | + | chr3.4:25488984-25489003 | None:intergenic | 30.0% |
| !!! | GCTTTTTAGTTCTCATGATT+TGG | - | chr3.4:25489699-25489718 | MS.gene77868:CDS | 30.0% |
| !!! | GTGTTTAGTATTTTAACCTG+AGG | - | chr3.4:25489447-25489466 | MS.gene77868:CDS | 30.0% |
| !!! | TCTATTTTGGGATTCTTCTA+TGG | + | chr3.4:25489043-25489062 | None:intergenic | 30.0% |
| !!! | TTAACCTGAAAAGCATTTTC+AGG | + | chr3.4:25487963-25487982 | None:intergenic | 30.0% |
| AAAGCTAAAATGCGACATCA+AGG | + | chr3.4:25487718-25487737 | None:intergenic | 35.0% | |
| AAATGCCGACATTCATAATG+TGG | - | chr3.4:25487566-25487585 | MS.gene77868:intron | 35.0% | |
| AAATGTACACTCTTGGGATT+AGG | - | chr3.4:25485496-25485515 | MS.gene77868:intron | 35.0% | |
| AAGGGATAGAAATAGAGAAG+AGG | - | chr3.4:25484973-25484992 | MS.gene77868:intron | 35.0% | |
| AATTTGGAGGGTTTAAGGAA+AGG | - | chr3.4:25485143-25485162 | MS.gene77868:intron | 35.0% | |
| ACCAAATGCAAGTTCTATTC+TGG | + | chr3.4:25485468-25485487 | None:intergenic | 35.0% | |
| ACCAGAATAGAACTTGCATT+TGG | - | chr3.4:25485464-25485483 | MS.gene77868:intron | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | + | chr3.4:25486453-25486472 | None:intergenic | 35.0% | |
| ACGTCTTCAATATGAAGTGT+CGG | + | chr3.4:25489329-25489348 | None:intergenic | 35.0% | |
| AGAATGTAGAAACTTCATGG+CGG | + | chr3.4:25484787-25484806 | None:intergenic | 35.0% | |
| AGATTGACGATGGAAACTAA+TGG | + | chr3.4:25488466-25488485 | None:intergenic | 35.0% | |
| AGGACATCCATAGAAGAATT+TGG | + | chr3.4:25487943-25487962 | None:intergenic | 35.0% | |
| ATGAATTTCGGTTTCTCAAC+AGG | - | chr3.4:25488141-25488160 | MS.gene77868:intron | 35.0% | |
| GAACAAGTGTGTTGAAATGT+TGG | + | chr3.4:25484690-25484709 | None:intergenic | 35.0% | |
| GATCTATGAACATGTTACTG+TGG | - | chr3.4:25485267-25485286 | MS.gene77868:intron | 35.0% | |
| GCTCTGTTTGGTAAAAATAG+CGG | - | chr3.4:25485583-25485602 | MS.gene77868:intron | 35.0% | |
| GGTATATATCTTTGAGTAGG+TGG | - | chr3.4:25489720-25489739 | MS.gene77868:CDS | 35.0% | |
| TAAAGGCGACAAAAGGAATT+TGG | + | chr3.4:25486646-25486665 | None:intergenic | 35.0% | |
| TACTTCATATAGGCTCTGTT+TGG | - | chr3.4:25485571-25485590 | MS.gene77868:intron | 35.0% | |
| TAGCAGGAATTATTGAGCAA+CGG | - | chr3.4:25489531-25489550 | MS.gene77868:CDS | 35.0% | |
| TCGACATCCACAATAATTTG+AGG | + | chr3.4:25489401-25489420 | None:intergenic | 35.0% | |
| TGTAGCATATGGGATTTACA+TGG | - | chr3.4:25488805-25488824 | MS.gene77868:intron | 35.0% | |
| TGTAGCTTGGTAAAGAAGAA+TGG | + | chr3.4:25484754-25484773 | None:intergenic | 35.0% | |
| TTCACCAAAACGATATGCTA+AGG | + | chr3.4:25488530-25488549 | None:intergenic | 35.0% | |
| TTCGACCAAAGTTACAAAGT+TGG | - | chr3.4:25486853-25486872 | MS.gene77868:intron | 35.0% | |
| TTTCTCGATTGTTTGCAGAA+TGG | + | chr3.4:25488558-25488577 | None:intergenic | 35.0% | |
| ! | AATTATTGAGCAACGGATTC+TGG | - | chr3.4:25489538-25489557 | MS.gene77868:CDS | 35.0% |
| ! | ACAAAGAATAGGTGCTATAG+TGG | - | chr3.4:25488195-25488214 | MS.gene77868:intron | 35.0% |
| ! | ACTTCCTTAGCATATCGTTT+TGG | - | chr3.4:25488523-25488542 | MS.gene77868:intron | 35.0% |
| ! | ATGTCCTGAAAATGCTTTTC+AGG | - | chr3.4:25487956-25487975 | MS.gene77868:intron | 35.0% |
| ! | GTTATGTCTTTTCAGAGTCA+GGG | - | chr3.4:25487101-25487120 | MS.gene77868:intron | 35.0% |
| ! | TTTACCTTGATAGTTCAGCA+TGG | - | chr3.4:25487368-25487387 | MS.gene77868:intron | 35.0% |
| !! | AGTTGGGATTTTGACAACAT+TGG | + | chr3.4:25488967-25488986 | None:intergenic | 35.0% |
| !! | TGTAGTAGTTTGTTGAAGGA+TGG | + | chr3.4:25488855-25488874 | None:intergenic | 35.0% |
| !!! | GGATTTTGTTGTTGCTAATG+TGG | - | chr3.4:25487024-25487043 | MS.gene77868:intron | 35.0% |
| AAATAAGGTAGTCTCGTTCG+GGG | + | chr3.4:25486815-25486834 | None:intergenic | 40.0% | |
| AAATAGAGAAGAGGCAATGC+TGG | - | chr3.4:25484982-25485001 | MS.gene77868:intron | 40.0% | |
| AAGTTGGAATCTCTCTCTAC+AGG | - | chr3.4:25486869-25486888 | MS.gene77868:intron | 40.0% | |
| AATGTGGCAAAATTCCTAGC+CGG | - | chr3.4:25487582-25487601 | MS.gene77868:intron | 40.0% | |
| AATTTCGGTTTCTCAACAGG+TGG | - | chr3.4:25488144-25488163 | MS.gene77868:intron | 40.0% | |
| ACAATCGAGAAAGTGGACAT+AGG | - | chr3.4:25488566-25488585 | MS.gene77868:intron | 40.0% | |
| AGAAAGACCTTGTTAGCAGA+GGG | + | chr3.4:25486753-25486772 | None:intergenic | 40.0% | |
| AGGGTTTAAGGAAAGGTTGT+TGG | - | chr3.4:25485150-25485169 | MS.gene77868:intron | 40.0% | |
| ATAAGTCCAGCACTAATTGC+AGG | + | chr3.4:25487918-25487937 | None:intergenic | 40.0% | |
| ATCAGGTATCAAGTACTAGC+AGG | - | chr3.4:25489515-25489534 | MS.gene77868:CDS | 40.0% | |
| ATCTCAACCAGTGTAGCATA+TGG | - | chr3.4:25488794-25488813 | MS.gene77868:intron | 40.0% | |
| ATGTTGACGAAGATTGACGA+TGG | + | chr3.4:25488476-25488495 | None:intergenic | 40.0% | |
| CAAATAAGGTAGTCTCGTTC+GGG | + | chr3.4:25486816-25486835 | None:intergenic | 40.0% | |
| CAATCGAGAAAGTGGACATA+GGG | - | chr3.4:25488567-25488586 | MS.gene77868:intron | 40.0% | |
| CCAAATAAGGTAGTCTCGTT+CGG | + | chr3.4:25486817-25486836 | None:intergenic | 40.0% | |
| CTAATGGAGTTCCATATGCA+AGG | + | chr3.4:25488450-25488469 | None:intergenic | 40.0% | |
| CTATGGATTTGAGTCGTTGA+AGG | + | chr3.4:25489026-25489045 | None:intergenic | 40.0% | |
| GAATGTAGAAACTTCATGGC+GGG | + | chr3.4:25484786-25484805 | None:intergenic | 40.0% | |
| GATACCATGCTGAACTATCA+AGG | + | chr3.4:25487375-25487394 | None:intergenic | 40.0% | |
| GGAGATGACCTTCACTTATA+AGG | + | chr3.4:25488260-25488279 | None:intergenic | 40.0% | |
| GTAAAGAAGAATGGCTACAG+CGG | + | chr3.4:25484745-25484764 | None:intergenic | 40.0% | |
| GTAAATCCCATATGCTACAC+TGG | + | chr3.4:25488804-25488823 | None:intergenic | 40.0% | |
| GTGTGTTGAAATGTTGGAGA+AGG | + | chr3.4:25484684-25484703 | None:intergenic | 40.0% | |
| TAGGTAACAGGCATAGTAAC+AGG | - | chr3.4:25487843-25487862 | MS.gene77868:intron | 40.0% | |
| TATATCTTTGAGTAGGTGGG+TGG | - | chr3.4:25489724-25489743 | MS.gene77868:CDS | 40.0% | |
| TCTCAACCAGTGTAGCATAT+GGG | - | chr3.4:25488795-25488814 | MS.gene77868:intron | 40.0% | |
| TCTGCAAACAATCGAGAAAG+TGG | - | chr3.4:25488559-25488578 | MS.gene77868:intron | 40.0% | |
| TGCGACATCAAGGAGATTAT+AGG | + | chr3.4:25487708-25487727 | None:intergenic | 40.0% | |
| TGTTAGCAGAGGGATTTCAA+AGG | + | chr3.4:25486743-25486762 | None:intergenic | 40.0% | |
| TGTTGTTGTCATCTTCACCA+AGG | - | chr3.4:25485210-25485229 | MS.gene77868:intron | 40.0% | |
| TTGAAATCCCTCTGCTAACA+AGG | - | chr3.4:25486743-25486762 | MS.gene77868:intron | 40.0% | |
| ! | ATTTCGCGAAAACTAGCTCT+TGG | - | chr3.4:25488423-25488442 | MS.gene77868:intron | 40.0% |
| ! | GGTTATGTCTTTTCAGAGTC+AGG | - | chr3.4:25487100-25487119 | MS.gene77868:intron | 40.0% |
| ! | GTCGCAAAATCCTGCATTTT+AGG | + | chr3.4:25488995-25489014 | None:intergenic | 40.0% |
| !! | AGGAGTCAGTTGTTTTCAGA+TGG | - | chr3.4:25485113-25485132 | MS.gene77868:intron | 40.0% |
| !! | GACTTTACTTCAGGTTGGAA+GGG | + | chr3.4:25489285-25489304 | None:intergenic | 40.0% |
| !!! | AGTGAGGAGGTTTTTTGAGT+TGG | - | chr3.4:25485090-25485109 | MS.gene77868:intron | 40.0% |
| AAGCTGTTCGTAGTTGGAAC+CGG | - | chr3.4:25488305-25488324 | MS.gene77868:intron | 45.0% | |
| AGCACACTATAGGCTCTGTT+TGG | + | chr3.4:25486563-25486582 | None:intergenic | 45.0% | |
| ATCTCTTATGCAGCGTAACG+GGG | - | chr3.4:25488280-25488299 | MS.gene77868:intron | 45.0% | |
| ATGTCTTTCTCAGCGGGAAA+TGG | - | chr3.4:25484884-25484903 | MS.gene77868:CDS | 45.0% | |
| ATTTCCCGCTGAGAAAGACA+TGG | + | chr3.4:25484885-25484904 | None:intergenic | 45.0% | |
| CAAAACCGGGACTTTACTTC+AGG | + | chr3.4:25489294-25489313 | None:intergenic | 45.0% | |
| CAGAAAGACCTTGTTAGCAG+AGG | + | chr3.4:25486754-25486773 | None:intergenic | 45.0% | |
| CATCTCTTATGCAGCGTAAC+GGG | - | chr3.4:25488279-25488298 | MS.gene77868:intron | 45.0% | |
| CCATCTCTTATGCAGCGTAA+CGG | - | chr3.4:25488278-25488297 | MS.gene77868:intron | 45.0% | |
| CCGAACGAGACTACCTTATT+TGG | - | chr3.4:25486814-25486833 | MS.gene77868:intron | 45.0% | |
| CGACGTATCAGTGTCATGTT+TGG | - | chr3.4:25489418-25489437 | MS.gene77868:CDS | 45.0% | |
| GAGCTCTATAACCAAGCTAG+TGG | + | chr3.4:25486602-25486621 | None:intergenic | 45.0% | |
| GCAGATATTGACCACTAGCT+TGG | - | chr3.4:25486588-25486607 | MS.gene77868:intron | 45.0% | |
| GCTGAGAAAGACATGGAAAC+CGG | + | chr3.4:25484878-25484897 | None:intergenic | 45.0% | |
| GGTTGGAGTCCAGAAGATAA+AGG | - | chr3.4:25489760-25489779 | MS.gene77868:CDS | 45.0% | |
| GGTTTCCATGTCTTTCTCAG+CGG | - | chr3.4:25484877-25484896 | MS.gene77868:CDS | 45.0% | |
| GTAGCAACTGCTAACAGACT+TGG | - | chr3.4:25487537-25487556 | MS.gene77868:intron | 45.0% | |
| GTTGAAGGATGGAATACCTG+AGG | + | chr3.4:25488844-25488863 | None:intergenic | 45.0% | |
| GTTTCCATGTCTTTCTCAGC+GGG | - | chr3.4:25484878-25484897 | MS.gene77868:CDS | 45.0% | |
| TAGAGCTCAACCAAGCTTCT+TGG | - | chr3.4:25486614-25486633 | MS.gene77868:intron | 45.0% | |
| TAGCTCTTGGTCCTTGCATA+TGG | - | chr3.4:25488436-25488455 | MS.gene77868:intron | 45.0% | |
| TAGGTCGATGGAGAGATTTC+CGG | - | chr3.4:25485021-25485040 | MS.gene77868:intron | 45.0% | |
| TCCAACCTGAAGTAAAGTCC+CGG | - | chr3.4:25489286-25489305 | MS.gene77868:CDS | 45.0% | |
| TGCCTTGATCAATGCACAGA+AGG | - | chr3.4:25488733-25488752 | MS.gene77868:intron | 45.0% | |
| TGGCATGAAAATAGGTGCAG+AGG | + | chr3.4:25484837-25484856 | None:intergenic | 45.0% | |
| TGGTAGTAGTTAGCAACCTC+AGG | - | chr3.4:25488825-25488844 | MS.gene77868:intron | 45.0% | |
| TTGGAACCTTCCAAGAAGCT+TGG | + | chr3.4:25486627-25486646 | None:intergenic | 45.0% | |
| ! | AGCCTTCTGTGCATTGATCA+AGG | + | chr3.4:25488738-25488757 | None:intergenic | 45.0% |
| ! | AGGAGGTGTAAGAGAAACAG+TGG | + | chr3.4:25487895-25487914 | None:intergenic | 45.0% |
| ! | GCTACACTGGTTGAGATTAC+AGG | + | chr3.4:25488791-25488810 | None:intergenic | 45.0% |
| ! | GGAGGTGTAAGAGAAACAGT+GGG | + | chr3.4:25487894-25487913 | None:intergenic | 45.0% |
| ! | GGATTTGGCTGTTGCTGTTA+AGG | - | chr3.4:25485045-25485064 | MS.gene77868:intron | 45.0% |
| ! | GGTGCTATAGTGGTATGTGT+TGG | - | chr3.4:25488205-25488224 | MS.gene77868:intron | 45.0% |
| ! | GTGGATTTTGCTAGATGGGT+TGG | - | chr3.4:25489743-25489762 | MS.gene77868:CDS | 45.0% |
| ! | TTTGGCTGTTGCTGTTAAGG+CGG | - | chr3.4:25485048-25485067 | MS.gene77868:intron | 45.0% |
| !! | AATATGAAGTGTCGGTGCCA+AGG | + | chr3.4:25489321-25489340 | None:intergenic | 45.0% |
| !! | GGACTTTACTTCAGGTTGGA+AGG | + | chr3.4:25489286-25489305 | None:intergenic | 45.0% |
| !! | GTGGGTGGATTTTGCTAGAT+GGG | - | chr3.4:25489739-25489758 | MS.gene77868:CDS | 45.0% |
| !! | TATTCGGACTTTTGAGGGGT+AGG | - | chr3.4:25488921-25488940 | MS.gene77868:intron | 45.0% |
| !!! | AGTTTGTTTTGGCGTAGCCA+TGG | + | chr3.4:25489566-25489585 | None:intergenic | 45.0% |
| !!! | GAGGAGGTTTTTTGAGTTGG+AGG | - | chr3.4:25485093-25485112 | MS.gene77868:intron | 45.0% |
| !!! | CTTTTATATATTATTTTTTT+GGG | + | chr3.4:25486185-25486204 | None:intergenic | 5.0% |
| !!! | TTTAATTATTCTAAATATTT+TGG | + | chr3.4:25485809-25485828 | None:intergenic | 5.0% |
| AACCTCCTCACTATCGAACC+AGG | + | chr3.4:25485082-25485101 | None:intergenic | 50.0% | |
| ACCGGGACTTTACTTCAGGT+TGG | + | chr3.4:25489290-25489309 | None:intergenic | 50.0% | |
| AGGTGGGGAAGAGGAAGAAA+GGG | - | chr3.4:25484955-25484974 | MS.gene77868:intron | 50.0% | |
| AGTCCAGCACTAATTGCAGG+AGG | + | chr3.4:25487915-25487934 | None:intergenic | 50.0% | |
| ATGGCTACAGCGGTAGACAT+TGG | + | chr3.4:25484735-25484754 | None:intergenic | 50.0% | |
| CCGTTACGCTGCATAAGAGA+TGG | + | chr3.4:25488281-25488300 | None:intergenic | 50.0% | |
| CGTGTTTACCAGTGAAGCAC+CGG | + | chr3.4:25488327-25488346 | None:intergenic | 50.0% | |
| GAAAATAGGTGCAGAGGCAG+AGG | + | chr3.4:25484831-25484850 | None:intergenic | 50.0% | |
| GCTCAACCAAGCTTCTTGGA+AGG | - | chr3.4:25486618-25486637 | MS.gene77868:intron | 50.0% | |
| GGCAGAGGAATGATTGAGCT+TGG | + | chr3.4:25484816-25484835 | None:intergenic | 50.0% | |
| GGTGCCAAGGTTGTCAAAAC+CGG | + | chr3.4:25489308-25489327 | None:intergenic | 50.0% | |
| GGTTTCTCAACAGGTGGCTT+TGG | - | chr3.4:25488150-25488169 | MS.gene77868:intron | 50.0% | |
| GTAAGAGAAACAGTGGGAGC+AGG | + | chr3.4:25487888-25487907 | None:intergenic | 50.0% | |
| GTGCCAAGGTTGTCAAAACC+GGG | + | chr3.4:25489307-25489326 | None:intergenic | 50.0% | |
| TCTGCGCACAAGCACACTAT+AGG | + | chr3.4:25486573-25486592 | None:intergenic | 50.0% | |
| TCTTTCTCAGCGGGAAATGG+AGG | - | chr3.4:25484887-25484906 | MS.gene77868:CDS | 50.0% | |
| ! | TTCCTGGTTCGATAGTGAGG+AGG | - | chr3.4:25485077-25485096 | MS.gene77868:intron | 50.0% |
| ! | TTGGCTGTTGCTGTTAAGGC+GGG | - | chr3.4:25485049-25485068 | MS.gene77868:intron | 50.0% |
| !! | AGAAGAGGCAATGCTGGTTC+TGG | - | chr3.4:25484988-25485007 | MS.gene77868:intron | 50.0% |
| !! | AGCAACGGATTCTGGAACCA+TGG | - | chr3.4:25489546-25489565 | MS.gene77868:CDS | 50.0% |
| !! | AGTCCCGGTTTTGACAACCT+TGG | - | chr3.4:25489301-25489320 | MS.gene77868:CDS | 50.0% |
| !! | GGTGGGTGGATTTTGCTAGA+TGG | - | chr3.4:25489738-25489757 | MS.gene77868:CDS | 50.0% |
| !! | TTTTCAGGCTGCTGCAGAGT+TGG | - | chr3.4:25486970-25486989 | MS.gene77868:intron | 50.0% |
| ACAGCAACAGCCAAATCCGC+CGG | + | chr3.4:25485043-25485062 | None:intergenic | 55.0% | |
| AGTTGGAACCGGTGCTTCAC+TGG | - | chr3.4:25488316-25488335 | MS.gene77868:intron | 55.0% | |
| CCAGCACTAATTGCAGGAGG+AGG | + | chr3.4:25487912-25487931 | None:intergenic | 55.0% | |
| CCTCCTCCTGCAATTAGTGC+TGG | - | chr3.4:25487909-25487928 | MS.gene77868:intron | 55.0% | |
| GAGGTGGGGAAGAGGAAGAA+AGG | - | chr3.4:25484954-25484973 | MS.gene77868:intron | 55.0% | |
| GGGGCAAAGCTGTTCGTAGT+TGG | - | chr3.4:25488299-25488318 | MS.gene77868:intron | 55.0% | |
| GTCGATGGAGAGATTTCCGG+CGG | - | chr3.4:25485024-25485043 | MS.gene77868:intron | 55.0% | |
| TTCTCAGCGGGAAATGGAGG+CGG | - | chr3.4:25484890-25484909 | MS.gene77868:CDS | 55.0% | |
| ! | CGGGCTGTGATGATGTAGCT+TGG | + | chr3.4:25484767-25484786 | None:intergenic | 55.0% |
| ! | GAAATGGAGGCGGGTTTCCA+GGG | - | chr3.4:25484900-25484919 | MS.gene77868:CDS | 55.0% |
| ! | GGAGAGATTTCCGGCGGATT+TGG | - | chr3.4:25485030-25485049 | MS.gene77868:intron | 55.0% |
| ! | GGGTTCCTGGTTCGATAGTG+AGG | - | chr3.4:25485074-25485093 | MS.gene77868:intron | 55.0% |
| ! | TGGCTGTTGCTGTTAAGGCG+GGG | - | chr3.4:25485050-25485069 | MS.gene77868:intron | 55.0% |
| !! | TCTCAACAGGTGGCTTTGGC+AGG | - | chr3.4:25488154-25488173 | MS.gene77868:intron | 55.0% |
| AGGCTGCTGCAGAGTTGGAG+CGG | - | chr3.4:25486975-25486994 | MS.gene77868:intron | 60.0% | |
| TCTCAGCGGGAAATGGAGGC+GGG | - | chr3.4:25484891-25484910 | MS.gene77868:CDS | 60.0% | |
| TTTCCAGGGAGTGGAGGTGG+TGG | - | chr3.4:25484914-25484933 | MS.gene77868:intron | 60.0% | |
| ! | CTGTTGCTGTTAAGGCGGGG+CGG | - | chr3.4:25485053-25485072 | MS.gene77868:intron | 60.0% |
| ! | GGAAATGGAGGCGGGTTTCC+AGG | - | chr3.4:25484899-25484918 | MS.gene77868:CDS | 60.0% |
| ! | TGTTGCTGTTAAGGCGGGGC+GGG | - | chr3.4:25485054-25485073 | MS.gene77868:intron | 60.0% |
| !! | ATGCTGGTTCTGGCTGAGGC+TGG | - | chr3.4:25484998-25485017 | MS.gene77868:intron | 60.0% |
| !! | GGCAATGCTGGTTCTGGCTG+AGG | - | chr3.4:25484994-25485013 | MS.gene77868:intron | 60.0% |
| !! | TGGTTCTGGCTGAGGCTGGT+AGG | - | chr3.4:25485002-25485021 | MS.gene77868:intron | 60.0% |
| GGCTGAGGCTGGTAGGTCGA+TGG | - | chr3.4:25485009-25485028 | MS.gene77868:intron | 65.0% | |
| GGGTTTCCAGGGAGTGGAGG+TGG | - | chr3.4:25484911-25484930 | MS.gene77868:intron | 65.0% | |
| GTAGTCTCGTTCGGGGCGTG+AGG | + | chr3.4:25486808-25486827 | None:intergenic | 65.0% | |
| !! | GAGTGGAGGTGGTGGTGGTG+GGG | - | chr3.4:25484922-25484941 | MS.gene77868:intron | 65.0% |
| !! | GGAGTGGAGGTGGTGGTGGT+GGG | - | chr3.4:25484921-25484940 | MS.gene77868:intron | 65.0% |
| CCACCACCACCTCCACTCCC+TGG | + | chr3.4:25484920-25484939 | None:intergenic | 70.0% | |
| CGACGGTGGAGGTGGGGAAG+AGG | - | chr3.4:25484946-25484965 | MS.gene77868:intron | 70.0% | |
| GTGGGGACGACGGTGGAGGT+GGG | - | chr3.4:25484939-25484958 | MS.gene77868:intron | 70.0% | |
| TGGGGACGACGGTGGAGGTG+GGG | - | chr3.4:25484940-25484959 | MS.gene77868:intron | 70.0% | |
| ! | CCAGGGAGTGGAGGTGGTGG+TGG | - | chr3.4:25484917-25484936 | MS.gene77868:intron | 70.0% |
| ! | GGAGGCGGGTTTCCAGGGAG+TGG | - | chr3.4:25484905-25484924 | MS.gene77868:CDS | 70.0% |
| ! | GGCGGGTTTCCAGGGAGTGG+AGG | - | chr3.4:25484908-25484927 | MS.gene77868:CDS | 70.0% |
| ! | GTTAAGGCGGGGCGGGTTCC+TGG | - | chr3.4:25485061-25485080 | MS.gene77868:intron | 70.0% |
| !! | GGGAGTGGAGGTGGTGGTGG+TGG | - | chr3.4:25484920-25484939 | MS.gene77868:intron | 70.0% |
| !! | GGTGGTGGTGGTGGGGACGA+CGG | - | chr3.4:25484929-25484948 | MS.gene77868:intron | 70.0% |
| GGTGGGGACGACGGTGGAGG+TGG | - | chr3.4:25484938-25484957 | MS.gene77868:intron | 75.0% | |
| !! | GGTGGTGGGGACGACGGTGG+AGG | - | chr3.4:25484935-25484954 | MS.gene77868:intron | 75.0% |
| !! | GGTGGTGGTGGGGACGACGG+TGG | - | chr3.4:25484932-25484951 | MS.gene77868:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 25484662 | 25489787 | 25484662 | ID=MS.gene77868 |
| chr3.4 | mRNA | 25484662 | 25489787 | 25484662 | ID=MS.gene77868.t1;Parent=MS.gene77868 |
| chr3.4 | exon | 25489218 | 25489787 | 25489218 | ID=MS.gene77868.t1.exon1;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25489218 | 25489787 | 25489218 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25487404 | 25487472 | 25487404 | ID=MS.gene77868.t1.exon2;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25487404 | 25487472 | 25487404 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25486472 | 25486603 | 25486472 | ID=MS.gene77868.t1.exon3;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25486472 | 25486603 | 25486472 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25486233 | 25486286 | 25486233 | ID=MS.gene77868.t1.exon4;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25486233 | 25486286 | 25486233 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25486112 | 25486156 | 25486112 | ID=MS.gene77868.t1.exon5;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25486112 | 25486156 | 25486112 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25485603 | 25485736 | 25485603 | ID=MS.gene77868.t1.exon6;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25485603 | 25485736 | 25485603 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25484804 | 25484929 | 25484804 | ID=MS.gene77868.t1.exon7;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25484804 | 25484929 | 25484804 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| chr3.4 | exon | 25484662 | 25484710 | 25484662 | ID=MS.gene77868.t1.exon8;Parent=MS.gene77868.t1 |
| chr3.4 | CDS | 25484662 | 25484710 | 25484662 | ID=cds.MS.gene77868.t1;Parent=MS.gene77868.t1 |
| Gene Sequence |
| Protein sequence |
