Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83615.t1 | XP_003595243.1 | 93.8 | 339 | 6 | 1 | 1 | 339 | 208 | 531 | 6.70E-178 | 633.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83615.t1 | O65837 | 71.6 | 338 | 80 | 2 | 1 | 338 | 204 | 525 | 1.1e-136 | 487.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83615.t1 | G7IQ81 | 93.8 | 339 | 6 | 1 | 1 | 339 | 208 | 531 | 4.8e-178 | 633.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene83615 | 0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene83615 | 0.843247 | 1.58E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene83615 | 0.825167 | 5.43E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene83615 | 0.828707 | 7.74E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene83615 | 0.840444 | 8.67E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene83615 | 0.838447 | 2.86E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene83615 | 0.81122 | 7.81E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene83615 | 0.827036 | 1.95E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene83615 | 0.844496 | 7.29E-59 | -1.69E-46 |
| MS.gene049614 | MS.gene83615 | 0.802484 | 5.49E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene83615 | 0.816327 | 5.85E-52 | -1.69E-46 |
| MS.gene049760 | MS.gene83615 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene83615 | 0.872473 | 3.10E-67 | -1.69E-46 |
| MS.gene050076 | MS.gene83615 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene83615 | 0.83392 | 4.04E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene83615 | 0.828746 | 7.57E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene83615 | 0.844284 | 8.32E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene83615 | 0.827455 | 1.55E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene83615 | 0.842425 | 2.61E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene83615 | 0.803033 | 4.23E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene83615 | 0.826699 | 2.35E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene83615 | 0.826002 | 3.44E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene83615 | 0.808281 | 3.35E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene83615 | 0.811917 | 5.51E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene83615 | 0.860606 | 1.84E-63 | -1.69E-46 |
| MS.gene050770 | MS.gene83615 | 0.862755 | 4.05E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene83615 | 0.868913 | 4.58E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene83615 | 0.823408 | 1.41E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene83615 | 0.810896 | 9.18E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene83615 | 0.801049 | 1.08E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene83615 | 0.826939 | 2.06E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene83615 | 0.946456 | 4.46E-105 | -1.69E-46 |
| MS.gene051617 | MS.gene83615 | 0.840599 | 7.89E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene83615 | 0.844723 | 6.34E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene83615 | 0.860878 | 1.52E-63 | -1.69E-46 |
| MS.gene051858 | MS.gene83615 | 0.824116 | 9.61E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene83615 | 0.825504 | 4.52E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene83615 | 0.800313 | 1.53E-48 | -1.69E-46 |
| MS.gene052271 | MS.gene83615 | 0.829043 | 6.42E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene83615 | 0.861428 | 1.03E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene83615 | 0.820662 | 6.09E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene83615 | 0.868535 | 6.07E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene83615 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene83615 | 0.832091 | 1.15E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene83615 | 0.819701 | 1.01E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene83615 | 0.844697 | 6.44E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene83615 | 0.839626 | 1.42E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene83615 | 0.827034 | 1.96E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene83615 | 0.866715 | 2.33E-65 | -1.69E-46 |
| MS.gene053103 | MS.gene83615 | 0.865528 | 5.53E-65 | -1.69E-46 |
| MS.gene053104 | MS.gene83615 | 0.874733 | 5.36E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene83615 | 0.852999 | 3.19E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene83615 | 0.848418 | 6.21E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene83615 | 0.829593 | 4.72E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene83615 | 0.817883 | 2.62E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene83615 | 0.857337 | 1.75E-62 | -1.69E-46 |
| MS.gene053384 | MS.gene83615 | 0.8361 | 1.14E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene83615 | 0.821133 | 4.75E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene83615 | 0.811158 | 8.05E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene83615 | 0.846312 | 2.35E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene83615 | 0.820479 | 6.71E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene83615 | 0.869915 | 2.16E-66 | -1.69E-46 |
| MS.gene054376 | MS.gene83615 | 0.845614 | 3.64E-59 | -1.69E-46 |
| MS.gene054543 | MS.gene83615 | 0.803691 | 3.09E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene83615 | 0.828666 | 7.92E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene83615 | 0.866921 | 2.00E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene83615 | 0.841468 | 4.67E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene83615 | 0.847446 | 1.15E-59 | -1.69E-46 |
| MS.gene055212 | MS.gene83615 | 0.830465 | 2.89E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene83615 | 0.877579 | 5.61E-69 | -1.69E-46 |
| MS.gene055289 | MS.gene83615 | 0.837272 | 5.73E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene83615 | 0.82885 | 7.15E-55 | -1.69E-46 |
| MS.gene055397 | MS.gene83615 | 0.851172 | 1.06E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene83615 | 0.843554 | 1.30E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene83615 | 0.827976 | 1.16E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene83615 | 0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene83615 | 0.818523 | 1.88E-52 | -1.69E-46 |
| MS.gene055638 | MS.gene83615 | 0.802022 | 6.83E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene83615 | 0.801571 | 8.45E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene83615 | 0.865578 | 5.33E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene83615 | 0.878016 | 3.95E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene83615 | 0.814584 | 1.43E-51 | -1.69E-46 |
| MS.gene055956 | MS.gene83615 | -0.82374 | 1.18E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene83615 | 0.836518 | 8.93E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene83615 | 0.818248 | 2.16E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene83615 | 0.816815 | 4.55E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene83615 | 0.801158 | 1.03E-48 | -1.69E-46 |
| MS.gene056609 | MS.gene83615 | 0.8665 | 2.72E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene83615 | 0.839022 | 2.03E-57 | -1.69E-46 |
| MS.gene056719 | MS.gene83615 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene83615 | 0.85491 | 8.99E-62 | -1.69E-46 |
| MS.gene057076 | MS.gene83615 | 0.813051 | 3.11E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene83615 | 0.881648 | 2.02E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene83615 | 0.81131 | 7.46E-51 | -1.69E-46 |
| MS.gene057246 | MS.gene83615 | 0.857891 | 1.20E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene83615 | 0.811354 | 7.30E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene83615 | 0.851345 | 9.43E-61 | -1.69E-46 |
| MS.gene05735 | MS.gene83615 | 0.817131 | 3.87E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene83615 | 0.85899 | 5.64E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene83615 | 0.820219 | 7.70E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene83615 | 0.833872 | 4.15E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene83615 | 0.823084 | 1.68E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene83615 | 0.848786 | 4.91E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene83615 | 0.817018 | 4.10E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene83615 | 0.870764 | 1.14E-66 | -1.69E-46 |
| MS.gene058748 | MS.gene83615 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene83615 | 0.84716 | 1.38E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene83615 | 0.831536 | 1.58E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene83615 | 0.823857 | 1.11E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene83615 | 0.848132 | 7.44E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene83615 | 0.839696 | 1.36E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene83615 | 0.826023 | 3.40E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene83615 | 0.846317 | 2.34E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene83615 | 0.810008 | 1.43E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene83615 | 0.843672 | 1.21E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene83615 | 0.817426 | 3.32E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene83615 | 0.819948 | 8.88E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene83615 | 0.816486 | 5.39E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene83615 | 0.821625 | 3.66E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene83615 | 0.842235 | 2.93E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene83615 | 0.800183 | 1.62E-48 | -1.69E-46 |
| MS.gene059902 | MS.gene83615 | 0.823267 | 1.52E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene83615 | 0.861408 | 1.05E-63 | -1.69E-46 |
| MS.gene060341 | MS.gene83615 | 0.817101 | 3.93E-52 | -1.69E-46 |
| MS.gene060728 | MS.gene83615 | 0.801172 | 1.02E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene83615 | 0.830726 | 2.50E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene83615 | 0.857815 | 1.26E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene83615 | 0.880065 | 7.46E-70 | -1.69E-46 |
| MS.gene060835 | MS.gene83615 | 0.820854 | 5.50E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene83615 | 0.804283 | 2.33E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene83615 | 0.826954 | 2.04E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene83615 | 0.805834 | 1.10E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene83615 | 0.873326 | 1.60E-67 | -1.69E-46 |
| MS.gene061051 | MS.gene83615 | -0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene83615 | 0.846776 | 1.76E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene83615 | 0.840747 | 7.22E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTAATAAATCAAA+AGG | - | 14485:1409-1428 | MS.gene83615:intergenic | 10.0% |
| !!! | TTTTTGTTTGTTATAATTTT+AGG | + | 14485:1127-1146 | MS.gene83615:intron | 10.0% |
| !! | AAAAAAATTAAGCAATAAGA+TGG | - | 14485:3290-3309 | MS.gene83615:intergenic | 15.0% |
| !! | AGAAGTTTCAATATATAATA+AGG | - | 14485:632-651 | MS.gene83615:intergenic | 15.0% |
| !! | ATTAAATGTATAAAATGTGA+TGG | + | 14485:1079-1098 | MS.gene83615:intron | 15.0% |
| !! | GAAGTTTCAATATATAATAA+GGG | - | 14485:631-650 | MS.gene83615:intergenic | 15.0% |
| !!! | TGCATTTAAATTTTCTTTTT+CGG | + | 14485:2575-2594 | MS.gene83615:intron | 15.0% |
| !!! | TTAATTTTTTTCACACTTTT+GGG | + | 14485:3299-3318 | MS.gene83615:intron | 15.0% |
| !! | ATGGTTCTTTCTAAATTATA+TGG | + | 14485:1609-1628 | MS.gene83615:intron | 20.0% |
| !! | GTGAAAAATCTAATATGAAT+GGG | + | 14485:3053-3072 | MS.gene83615:intron | 20.0% |
| !! | TGGTTCTTTCTAAATTATAT+GGG | + | 14485:1610-1629 | MS.gene83615:intron | 20.0% |
| !! | TGTGAAAAATCTAATATGAA+TGG | + | 14485:3052-3071 | MS.gene83615:intron | 20.0% |
| !! | TTATCAAGATTAAATACGAT+GGG | + | 14485:1433-1452 | MS.gene83615:CDS | 20.0% |
| !!! | CATATATGTCATAGATATTT+TGG | + | 14485:2753-2772 | MS.gene83615:intron | 20.0% |
| !!! | CTTAATTTTTTTCACACTTT+TGG | + | 14485:3298-3317 | MS.gene83615:intron | 20.0% |
| !!! | GTTATGGTTTTTAGTAAAAA+GGG | - | 14485:3178-3197 | MS.gene83615:intergenic | 20.0% |
| !!! | TGTTATGGTTTTTAGTAAAA+AGG | - | 14485:3179-3198 | MS.gene83615:intergenic | 20.0% |
| ! | AAAAACTTATGAAGAGGTAA+GGG | + | 14485:1468-1487 | MS.gene83615:intron | 25.0% |
| ! | AATACCAATTCTATGTTCTT+TGG | + | 14485:2893-2912 | MS.gene83615:intron | 25.0% |
| ! | AATATATAATAAGGGCAACA+TGG | - | 14485:623-642 | MS.gene83615:intergenic | 25.0% |
| ! | ACTATTATGTAACAGCTAAA+AGG | - | 14485:1933-1952 | MS.gene83615:intergenic | 25.0% |
| ! | AGAGACATTCTTAAGTTATT+TGG | - | 14485:3453-3472 | MS.gene83615:intergenic | 25.0% |
| ! | AGTTAATCATCATTCCATTA+TGG | - | 14485:3337-3356 | MS.gene83615:intergenic | 25.0% |
| ! | AGTTACAAAAACTTATGAAG+AGG | + | 14485:1462-1481 | MS.gene83615:CDS | 25.0% |
| ! | ATGTTATGTTGTTAAAGACA+AGG | - | 14485:1035-1054 | MS.gene83615:intergenic | 25.0% |
| ! | ATTCTATGTTCTTTGGATAA+TGG | + | 14485:2900-2919 | MS.gene83615:intron | 25.0% |
| ! | CTTATCAAGATTAAATACGA+TGG | + | 14485:1432-1451 | MS.gene83615:CDS | 25.0% |
| ! | CTTTAATAAATCAAAAGGCA+TGG | - | 14485:1404-1423 | MS.gene83615:intergenic | 25.0% |
| ! | GTCATTTAACAATACATATG+CGG | - | 14485:1713-1732 | MS.gene83615:intergenic | 25.0% |
| ! | TAGAAAATGTTTCAAAAGTG+TGG | + | 14485:935-954 | MS.gene83615:intron | 25.0% |
| ! | TATAAAAACACGATAGTACA+AGG | + | 14485:3006-3025 | MS.gene83615:intron | 25.0% |
| ! | TATCAAGATTAAATACGATG+GGG | + | 14485:1434-1453 | MS.gene83615:CDS | 25.0% |
| ! | TATTACTTATGGAAGAAGTA+AGG | + | 14485:2318-2337 | MS.gene83615:CDS | 25.0% |
| ! | TGTATTGTTAAATGACCAAT+CGG | + | 14485:1717-1736 | MS.gene83615:intron | 25.0% |
| ! | TTAGCTGTTACATAATAGTT+GGG | + | 14485:1934-1953 | MS.gene83615:intron | 25.0% |
| ! | TTATCCAAAGAACATAGAAT+TGG | - | 14485:2900-2919 | MS.gene83615:intergenic | 25.0% |
| ! | TTTAGCTGTTACATAATAGT+TGG | + | 14485:1933-1952 | MS.gene83615:intron | 25.0% |
| !! | AAGCATAGTTTTCGTAATTT+TGG | - | 14485:2418-2437 | MS.gene83615:intergenic | 25.0% |
| !! | AGAAAATGTTTCAAAAGTGT+GGG | + | 14485:936-955 | MS.gene83615:intron | 25.0% |
| !! | ATTGCTACAATTTTGAATGA+CGG | + | 14485:2280-2299 | MS.gene83615:CDS | 25.0% |
| !! | TTTTCTCTACAAATTTGTGT+AGG | + | 14485:2032-2051 | MS.gene83615:intron | 25.0% |
| !!! | TACTGTTTTTATTAGACTGT+TGG | + | 14485:793-812 | MS.gene83615:CDS | 25.0% |
| AAAAACCTACTTGACGATAT+AGG | + | 14485:3515-3534 | MS.gene83615:CDS | 30.0% | |
| AAAAGTAGAAAGGATTGTTG+AGG | + | 14485:451-470 | MS.gene83615:CDS | 30.0% | |
| AAAATGTCAGCTCTCAAATT+TGG | - | 14485:2518-2537 | MS.gene83615:intergenic | 30.0% | |
| AACAGAACTGCATTACTTAA+TGG | - | 14485:1328-1347 | MS.gene83615:intergenic | 30.0% | |
| AACTTCTGACCTGTTATTAT+AGG | + | 14485:645-664 | MS.gene83615:intron | 30.0% | |
| AAGATATGTACTAGTACGAT+AGG | - | 14485:1744-1763 | MS.gene83615:intergenic | 30.0% | |
| AGAATTGGTATTATGAACTG+TGG | - | 14485:2885-2904 | MS.gene83615:intergenic | 30.0% | |
| AGATAGAAGATAGAATGTAG+AGG | - | 14485:2825-2844 | MS.gene83615:intergenic | 30.0% | |
| AGTATAATACATGCTTTCAG+CGG | - | 14485:1840-1859 | MS.gene83615:intergenic | 30.0% | |
| CAAAAACTTATGAAGAGGTA+AGG | + | 14485:1467-1486 | MS.gene83615:intron | 30.0% | |
| CATAAAGGTTAGTAGTATTC+AGG | + | 14485:3210-3229 | MS.gene83615:intron | 30.0% | |
| CTACATTCTATCTTCTATCT+TGG | + | 14485:2825-2844 | MS.gene83615:intron | 30.0% | |
| GTATCATCCTATATGGAAAA+TGG | - | 14485:1684-1703 | MS.gene83615:intergenic | 30.0% | |
| TACATATTAGCATCTGATGT+TGG | + | 14485:1998-2017 | MS.gene83615:intron | 30.0% | |
| TATATCACAAGAAAGCAAAC+TGG | - | 14485:3258-3277 | MS.gene83615:intergenic | 30.0% | |
| TATGTTGTTAAAGACAAGGA+AGG | - | 14485:1031-1050 | MS.gene83615:intergenic | 30.0% | |
| TCTACAAATTTGTGTAGGAA+TGG | + | 14485:2037-2056 | MS.gene83615:intron | 30.0% | |
| ! | ACAATCCAATCATATTTTGC+AGG | - | 14485:846-865 | MS.gene83615:intergenic | 30.0% |
| ! | CAGAGATCTTTCTTTCTTTT+TGG | + | 14485:2638-2657 | MS.gene83615:CDS | 30.0% |
| ! | CATAGTTTTCGTAATTTTGG+AGG | - | 14485:2415-2434 | MS.gene83615:intergenic | 30.0% |
| ! | GCTATCAGTATTACATTTTG+AGG | + | 14485:1501-1520 | MS.gene83615:intron | 30.0% |
| ! | TAATATCGTTTTCGTCCAAT+AGG | + | 14485:2208-2227 | MS.gene83615:intron | 30.0% |
| !! | ACATTTTCTGATATTTGCTG+CGG | + | 14485:1778-1797 | MS.gene83615:intron | 30.0% |
| !! | GATTAACTGATTTTTATCGC+AGG | + | 14485:3349-3368 | MS.gene83615:intron | 30.0% |
| AAAAGGACAATTGGAAATCG+AGG | - | 14485:1916-1935 | MS.gene83615:intergenic | 35.0% | |
| AAACAATAGAAGATCTCTCG+AGG | - | 14485:3406-3425 | MS.gene83615:intergenic | 35.0% | |
| AAACTATTGCAGTATGAGGT+TGG | + | 14485:701-720 | MS.gene83615:CDS | 35.0% | |
| AAAGGACAATTGGAAATCGA+GGG | - | 14485:1915-1934 | MS.gene83615:intergenic | 35.0% | |
| AACAATACCTCGTGACATAA+AGG | + | 14485:3195-3214 | MS.gene83615:intron | 35.0% | |
| AACTATTGCAGTATGAGGTT+GGG | + | 14485:702-721 | MS.gene83615:CDS | 35.0% | |
| AACTCAAAGAACAGCTTGAA+TGG | - | 14485:3086-3105 | MS.gene83615:intergenic | 35.0% | |
| AAGAACAGCTTGAATGGTAA+TGG | - | 14485:3080-3099 | MS.gene83615:intergenic | 35.0% | |
| ACTGCAATACACTTTCTAAC+AGG | + | 14485:1527-1546 | MS.gene83615:intron | 35.0% | |
| AGTAGCAAGCCTATAATAAC+AGG | - | 14485:657-676 | MS.gene83615:intergenic | 35.0% | |
| ATCTTGGCTCAAAAGTAGAA+AGG | + | 14485:441-460 | MS.gene83615:CDS | 35.0% | |
| ATTAAATCTCTCCTATCCCT+AGG | - | 14485:3122-3141 | MS.gene83615:intergenic | 35.0% | |
| CACTAAACTAAAATCCCCTT+TGG | + | 14485:2941-2960 | MS.gene83615:intron | 35.0% | |
| CATGGATAGACCAATACTTA+GGG | - | 14485:1005-1024 | MS.gene83615:intergenic | 35.0% | |
| GCAAGGGACATTATTACTTA+TGG | + | 14485:2307-2326 | MS.gene83615:CDS | 35.0% | |
| GCAATTACTGAAGCATATTG+CGG | - | 14485:2265-2284 | MS.gene83615:intergenic | 35.0% | |
| GCACTAAGTATCATCCTATA+TGG | - | 14485:1691-1710 | MS.gene83615:intergenic | 35.0% | |
| GGATTGAAATTGCTCCATAA+TGG | + | 14485:3320-3339 | MS.gene83615:intron | 35.0% | |
| GGCATTGCATAAAGAAATGT+TGG | - | 14485:1245-1264 | MS.gene83615:intergenic | 35.0% | |
| GTAACAGCTAAAAGGACAAT+TGG | - | 14485:1925-1944 | MS.gene83615:intergenic | 35.0% | |
| TATAGAGAAATTCCAATCGC+AGG | + | 14485:1354-1373 | MS.gene83615:intron | 35.0% | |
| TCAGACTTCTCATTGATGTA+AGG | + | 14485:2537-2556 | MS.gene83615:intron | 35.0% | |
| TGCAATTTACCCGACTTATA+AGG | - | 14485:967-986 | MS.gene83615:intergenic | 35.0% | |
| TTAAATCTCTCCTATCCCTA+GGG | - | 14485:3121-3140 | MS.gene83615:intergenic | 35.0% | |
| TTATACTGGAGAACATTGAC+AGG | + | 14485:1853-1872 | MS.gene83615:intron | 35.0% | |
| TTTATCATAGTTGACCCTGT+AGG | - | 14485:3498-3517 | MS.gene83615:intergenic | 35.0% | |
| TTTGAATGACGGTAATGCAA+GGG | + | 14485:2291-2310 | MS.gene83615:CDS | 35.0% | |
| ! | AACACTTTTGTACGAGACAT+GGG | - | 14485:1266-1285 | MS.gene83615:intergenic | 35.0% |
| ! | CCATTCAATTTTCAGCCAAT+AGG | - | 14485:1573-1592 | MS.gene83615:intergenic | 35.0% |
| ! | CCTATTGGCTGAAAATTGAA+TGG | + | 14485:1570-1589 | MS.gene83615:intron | 35.0% |
| ! | GATGCATCCATTTTCCATAT+AGG | + | 14485:1674-1693 | MS.gene83615:intron | 35.0% |
| ! | GCTGAAAGCATGTATTATAC+TGG | + | 14485:1839-1858 | MS.gene83615:intron | 35.0% |
| ! | TTTTGAATGACGGTAATGCA+AGG | + | 14485:2290-2309 | MS.gene83615:CDS | 35.0% |
| !! | AGTTTTAATGAAAGCTCCCT+AGG | + | 14485:3102-3121 | MS.gene83615:intron | 35.0% |
| !! | GTTTTAATGAAAGCTCCCTA+GGG | + | 14485:3103-3122 | MS.gene83615:intron | 35.0% |
| !! | TATGTCACGAGGTATTGTTA+TGG | - | 14485:3194-3213 | MS.gene83615:intergenic | 35.0% |
| !! | TCGTACAAAAGTGTTCTTTG+AGG | + | 14485:1271-1290 | MS.gene83615:CDS | 35.0% |
| !! | TTTCGTAATTTTGGAGGAAC+TGG | - | 14485:2409-2428 | MS.gene83615:intergenic | 35.0% |
| !!! | TTTTCTTTTTCGGTTCAGCT+TGG | + | 14485:2585-2604 | MS.gene83615:intron | 35.0% |
| AAAAACAGTGCTTCCCTTGA+TGG | + | 14485:1879-1898 | MS.gene83615:intron | 40.0% | |
| AAAATCCCCTTTGGTATGCA+TGG | + | 14485:2950-2969 | MS.gene83615:intron | 40.0% | |
| AACTTCCCTAAACCTTGCTA+TGG | + | 14485:581-600 | MS.gene83615:intron | 40.0% | |
| AAGAACCATTTCCAAAGTCC+CGG | - | 14485:1598-1617 | MS.gene83615:intergenic | 40.0% | |
| AAGGGAGTTGTAGCATGTAA+AGG | - | 14485:3160-3179 | MS.gene83615:intergenic | 40.0% | |
| ACCATCACGTTTGGATCATA+AGG | - | 14485:1164-1183 | MS.gene83615:intergenic | 40.0% | |
| ACTATTGCAGTATGAGGTTG+GGG | + | 14485:703-722 | MS.gene83615:CDS | 40.0% | |
| ACTTGATTACCTCGCATTGA+TGG | - | 14485:2349-2368 | MS.gene83615:intergenic | 40.0% | |
| AGAAATAGACCATACCACTC+AGG | - | 14485:2731-2750 | MS.gene83615:intergenic | 40.0% | |
| AGCTTATGGTGTAGAAGTTG+AGG | + | 14485:748-767 | MS.gene83615:CDS | 40.0% | |
| AGGGAAACTATTGCAGTATG+AGG | + | 14485:697-716 | MS.gene83615:CDS | 40.0% | |
| AGGTTCTTCTGTTCTGTGTT+TGG | - | 14485:2090-2109 | MS.gene83615:intergenic | 40.0% | |
| ATACACTTTGGCCACAAGAA+AGG | + | 14485:2609-2628 | MS.gene83615:CDS | 40.0% | |
| ATCCTACCATGCATACCAAA+GGG | - | 14485:2959-2978 | MS.gene83615:intergenic | 40.0% | |
| ATCTGCTTTCAGATCCTACA+GGG | + | 14485:3481-3500 | MS.gene83615:CDS | 40.0% | |
| ATCTTCTATCTTGGCTTCAG+TGG | + | 14485:2834-2853 | MS.gene83615:intron | 40.0% | |
| ATGGTGTAGAAGTTGAGGTA+GGG | + | 14485:753-772 | MS.gene83615:CDS | 40.0% | |
| ATTAGCACTAATTGTGCAGC+TGG | + | 14485:2661-2680 | MS.gene83615:CDS | 40.0% | |
| CAGGTAAGCAGAAGAAAGTA+CGG | - | 14485:2712-2731 | MS.gene83615:intergenic | 40.0% | |
| CCAGATAGTAGAACTGTTTG+AGG | - | 14485:2453-2472 | MS.gene83615:intergenic | 40.0% | |
| CCTCAAACAGTTCTACTATC+TGG | + | 14485:2450-2469 | MS.gene83615:intron | 40.0% | |
| CCTGTCCTGCAAAATATGAT+TGG | + | 14485:838-857 | MS.gene83615:intron | 40.0% | |
| CTACTAACCTTTATGTCACG+AGG | - | 14485:3205-3224 | MS.gene83615:intergenic | 40.0% | |
| CTCAACATACTCTCTCCTAT+TGG | + | 14485:1555-1574 | MS.gene83615:intron | 40.0% | |
| CTTCTGTTCTGTGTTTGGTA+AGG | - | 14485:2085-2104 | MS.gene83615:intergenic | 40.0% | |
| GAACAGAAGAACCTTGCATT+TGG | + | 14485:2096-2115 | MS.gene83615:CDS | 40.0% | |
| GCATGGATAGACCAATACTT+AGG | - | 14485:1006-1025 | MS.gene83615:intergenic | 40.0% | |
| GCTGAAAATTGAATGGTTCC+GGG | + | 14485:1577-1596 | MS.gene83615:intron | 40.0% | |
| GGAGGAACTGGTAACATTTA+GGG | - | 14485:2397-2416 | MS.gene83615:intergenic | 40.0% | |
| GGCTGAAAATTGAATGGTTC+CGG | + | 14485:1576-1595 | MS.gene83615:intron | 40.0% | |
| GGGCTCATCTTGTCAAAAAA+AGG | + | 14485:1652-1671 | MS.gene83615:intron | 40.0% | |
| GGTTCCGCATAAATTTAGCA+CGG | + | 14485:1631-1650 | MS.gene83615:intron | 40.0% | |
| GTGTGTGTACAAACAGCTTA+TGG | + | 14485:734-753 | MS.gene83615:CDS | 40.0% | |
| GTTCAGCTTGGAATACACTT+TGG | + | 14485:2597-2616 | MS.gene83615:intron | 40.0% | |
| GTTCCGCATAAATTTAGCAC+GGG | + | 14485:1632-1651 | MS.gene83615:intron | 40.0% | |
| TAAAGACAAGGAAGGAAGCA+TGG | - | 14485:1023-1042 | MS.gene83615:intergenic | 40.0% | |
| TATCCTACCATGCATACCAA+AGG | - | 14485:2960-2979 | MS.gene83615:intergenic | 40.0% | |
| TATGCATGGTAGGATAGCAT+AGG | + | 14485:2964-2983 | MS.gene83615:intron | 40.0% | |
| TATGGTGTAGAAGTTGAGGT+AGG | + | 14485:752-771 | MS.gene83615:CDS | 40.0% | |
| TCCATGAAAACCATCACGTT+TGG | - | 14485:1173-1192 | MS.gene83615:intergenic | 40.0% | |
| TCCTTATGATCCAAACGTGA+TGG | + | 14485:1160-1179 | MS.gene83615:CDS | 40.0% | |
| TGGAGGAACTGGTAACATTT+AGG | - | 14485:2398-2417 | MS.gene83615:intergenic | 40.0% | |
| TGGATTGTTGTACTGTACAG+TGG | + | 14485:858-877 | MS.gene83615:intron | 40.0% | |
| ! | CCAATCATATTTTGCAGGAC+AGG | - | 14485:841-860 | MS.gene83615:intergenic | 40.0% |
| ! | CTGATTTTTATCGCAGGATG+TGG | + | 14485:3355-3374 | MS.gene83615:intron | 40.0% |
| ! | CTGGTAACATTTAGGGTCTA+AGG | - | 14485:2390-2409 | MS.gene83615:intergenic | 40.0% |
| ! | GAACACTTTTGTACGAGACA+TGG | - | 14485:1267-1286 | MS.gene83615:intergenic | 40.0% |
| ! | TCCAAACGTGATGGTTTTCA+TGG | + | 14485:1169-1188 | MS.gene83615:CDS | 40.0% |
| ! | TTATGAAGAGGTAAGGGCAT+TGG | + | 14485:1474-1493 | MS.gene83615:intron | 40.0% |
| !! | GAATGGTCTTATATCCCAGT+TGG | + | 14485:2054-2073 | MS.gene83615:CDS | 40.0% |
| !! | GGTCTAAGGTTCTAAGCTTA+CGG | - | 14485:2376-2395 | MS.gene83615:intergenic | 40.0% |
| AAGGAGAATCCATCAATGCG+AGG | + | 14485:2337-2356 | MS.gene83615:CDS | 45.0% | |
| AATGAAAGCTCCCTAGGGAT+AGG | + | 14485:3108-3127 | MS.gene83615:intron | 45.0% | |
| ACTAGTACGATAGGACCGAT+TGG | - | 14485:1735-1754 | MS.gene83615:intergenic | 45.0% | |
| AGGATGTGGCAAGGATTTCT+TGG | + | 14485:3369-3388 | MS.gene83615:intron | 45.0% | |
| AGGATTGTTGAGGCTAGCAA+TGG | + | 14485:461-480 | MS.gene83615:CDS | 45.0% | |
| AGGGTAAAAGACTGCCATCA+AGG | - | 14485:1896-1915 | MS.gene83615:intergenic | 45.0% | |
| ATTGAATGGTTCCGGGACTT+TGG | + | 14485:1584-1603 | MS.gene83615:intron | 45.0% | |
| ATTGTGCAGCTGGACATTGA+AGG | + | 14485:2671-2690 | MS.gene83615:CDS | 45.0% | |
| CATCTGCTTTCAGATCCTAC+AGG | + | 14485:3480-3499 | MS.gene83615:CDS | 45.0% | |
| CCAAACATGTTTCCTGCGAT+TGG | - | 14485:1369-1388 | MS.gene83615:intergenic | 45.0% | |
| CCAATCGCAGGAAACATGTT+TGG | + | 14485:1366-1385 | MS.gene83615:intron | 45.0% | |
| CTATTGCAGTATGAGGTTGG+GGG | + | 14485:704-723 | MS.gene83615:CDS | 45.0% | |
| CTCACAACAGAGTAGCCTAT+TGG | - | 14485:2226-2245 | MS.gene83615:intergenic | 45.0% | |
| CTTTCTTCTGCTTACCTGAG+TGG | + | 14485:2714-2733 | MS.gene83615:CDS | 45.0% | |
| GAGCCCGTGCTAAATTTATG+CGG | - | 14485:1638-1657 | MS.gene83615:intergenic | 45.0% | |
| GCTGTTTGTACACACACCTT+TGG | - | 14485:731-750 | MS.gene83615:intergenic | 45.0% | |
| GGATAGCATAGGACACGATA+AGG | + | 14485:2975-2994 | MS.gene83615:intron | 45.0% | |
| GGGTAAAAGACTGCCATCAA+GGG | - | 14485:1895-1914 | MS.gene83615:intergenic | 45.0% | |
| GGGTAAATTGCACCAAGTCT+GGG | + | 14485:975-994 | MS.gene83615:intron | 45.0% | |
| TAGCGCCATAGCAAGGTTTA+GGG | - | 14485:589-608 | MS.gene83615:intergenic | 45.0% | |
| TCAAAACTAGCGCCATAGCA+AGG | - | 14485:596-615 | MS.gene83615:intergenic | 45.0% | |
| TCCTACCATGCATACCAAAG+GGG | - | 14485:2958-2977 | MS.gene83615:intergenic | 45.0% | |
| TCTGGGAAGTCCCTAAGTAT+TGG | + | 14485:992-1011 | MS.gene83615:intron | 45.0% | |
| TTCTGCTTACCTGAGTGGTA+TGG | + | 14485:2719-2738 | MS.gene83615:intron | 45.0% | |
| TTGGTAAGGATCCACCAACT+GGG | - | 14485:2071-2090 | MS.gene83615:intergenic | 45.0% | |
| TTTGGTAAGGATCCACCAAC+TGG | - | 14485:2072-2091 | MS.gene83615:intergenic | 45.0% | |
| ! | AAACAGTGTGCTGACAAGCT+TGG | + | 14485:881-900 | MS.gene83615:intron | 45.0% |
| ! | ATGTTTCAAAAGTGTGGGCG+TGG | + | 14485:941-960 | MS.gene83615:intron | 45.0% |
| ! | CTCTGTCGTTTCCTTTCTTG+TGG | - | 14485:2623-2642 | MS.gene83615:intergenic | 45.0% |
| ! | CTGATATTTGCTGCGGTCAT+TGG | + | 14485:1785-1804 | MS.gene83615:intron | 45.0% |
| ! | TTTTATCGCAGGATGTGGCA+AGG | + | 14485:3360-3379 | MS.gene83615:intron | 45.0% |
| !! | TGGTCTTATATCCCAGTTGG+TGG | + | 14485:2057-2076 | MS.gene83615:CDS | 45.0% |
| ACTTAGGGACTTCCCAGACT+TGG | - | 14485:990-1009 | MS.gene83615:intergenic | 50.0% | |
| AGCATGCAAATCGTACCTGC+AGG | - | 14485:525-544 | MS.gene83615:intergenic | 50.0% | |
| ATGATACTGTAGTGCCCTGC+AGG | + | 14485:507-526 | MS.gene83615:CDS | 50.0% | |
| ATGTGACCATGTCATGCCTG+TGG | - | 14485:2148-2167 | MS.gene83615:intergenic | 50.0% | |
| CGGGTAAATTGCACCAAGTC+TGG | + | 14485:974-993 | MS.gene83615:intron | 50.0% | |
| CTAGCGCCATAGCAAGGTTT+AGG | - | 14485:590-609 | MS.gene83615:intergenic | 50.0% | |
| GCATGCAAATCGTACCTGCA+GGG | - | 14485:524-543 | MS.gene83615:intergenic | 50.0% | |
| TCCCCTTTGGTATGCATGGT+AGG | + | 14485:2954-2973 | MS.gene83615:intron | 50.0% | |
| TTGCATCAGGAGCAGCTTCA+GGG | + | 14485:678-697 | MS.gene83615:CDS | 50.0% | |
| ! | TGGTTCCGGGACTTTGGAAA+TGG | + | 14485:1590-1609 | MS.gene83615:intron | 50.0% |
| !! | AGGCTTGCTACTGTTGCATC+AGG | + | 14485:665-684 | MS.gene83615:intron | 50.0% |
| ATCCAGCCACAGGCATGACA+TGG | + | 14485:2139-2158 | MS.gene83615:intron | 55.0% | |
| GTATGAGGTTGGGGGTCCAA+AGG | + | 14485:712-731 | MS.gene83615:CDS | 55.0% | |
| GTTGCATCAGGAGCAGCTTC+AGG | + | 14485:677-696 | MS.gene83615:CDS | 55.0% | |
| TAGAAGTTGAGGTAGGGCGC+TGG | + | 14485:759-778 | MS.gene83615:CDS | 55.0% | |
| TGGCAGCTGCACCAAATGCA+AGG | - | 14485:2110-2129 | MS.gene83615:intergenic | 55.0% | |
| !! | ATTTGGTGCAGCTGCCAGCA+TGG | + | 14485:2113-2132 | MS.gene83615:CDS | 55.0% |
| !! | GTGGGCGTGGCCTTATAAGT+CGG | + | 14485:954-973 | MS.gene83615:intron | 55.0% |
| !! | TGGGCGTGGCCTTATAAGTC+GGG | + | 14485:955-974 | MS.gene83615:intron | 55.0% |
| AGCATGGTGCATCCAGCCAC+AGG | + | 14485:2129-2148 | MS.gene83615:CDS | 60.0% | |
| GACCATGTCATGCCTGTGGC+TGG | - | 14485:2144-2163 | MS.gene83615:intergenic | 60.0% | |
| TGTGGCTGGATGCACCATGC+TGG | - | 14485:2130-2149 | MS.gene83615:intergenic | 60.0% | |
| !! | GAGGTAGGGCGCTGGCTCTT+TGG | + | 14485:767-786 | MS.gene83615:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14485 | gene | 432 | 3536 | 432 | ID=MS.gene83615 |
| 14485 | mRNA | 432 | 3536 | 432 | ID=MS.gene83615.t1;Parent=MS.gene83615 |
| 14485 | exon | 432 | 528 | 432 | ID=MS.gene83615.t1.exon1;Parent=MS.gene83615.t1 |
| 14485 | CDS | 432 | 528 | 432 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 667 | 814 | 667 | ID=MS.gene83615.t1.exon2;Parent=MS.gene83615.t1 |
| 14485 | CDS | 667 | 814 | 667 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 1149 | 1292 | 1149 | ID=MS.gene83615.t1.exon3;Parent=MS.gene83615.t1 |
| 14485 | CDS | 1149 | 1292 | 1149 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 1376 | 1483 | 1376 | ID=MS.gene83615.t1.exon4;Parent=MS.gene83615.t1 |
| 14485 | CDS | 1376 | 1483 | 1376 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 2054 | 2150 | 2054 | ID=MS.gene83615.t1.exon5;Parent=MS.gene83615.t1 |
| 14485 | CDS | 2054 | 2150 | 2054 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 2230 | 2358 | 2230 | ID=MS.gene83615.t1.exon6;Parent=MS.gene83615.t1 |
| 14485 | CDS | 2230 | 2358 | 2230 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 2603 | 2735 | 2603 | ID=MS.gene83615.t1.exon7;Parent=MS.gene83615.t1 |
| 14485 | CDS | 2603 | 2735 | 2603 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| 14485 | exon | 3371 | 3536 | 3371 | ID=MS.gene83615.t1.exon8;Parent=MS.gene83615.t1 |
| 14485 | CDS | 3371 | 3536 | 3371 | ID=cds.MS.gene83615.t1;Parent=MS.gene83615.t1 |
| Gene Sequence |
| Protein sequence |
