Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024569.01.T01 | GAU29290.1 | 82.54 | 252 | 31 | 1 | 117 | 355 | 45 | 296 | 1.82E-146 | 426 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024569.01.T01 | A0A2Z6MZV4 | 82.540 | 252 | 31 | 1 | 117 | 355 | 45 | 296 | 8.68e-147 | 426 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048727.01 | MsG0580024569.01 | 0.821274 | 4.404566e-53 | 3.566870e-50 |
MsG0080048773.01 | MsG0580024569.01 | 0.850417 | 1.721672e-60 | 3.370297e-57 |
MsG0080048849.01 | MsG0580024569.01 | 0.814567 | 1.442688e-51 | 9.714316e-49 |
MsG0080048878.01 | MsG0580024569.01 | 0.815892 | 7.323389e-52 | 5.112008e-49 |
MsG0080048938.01 | MsG0580024569.01 | 0.815433 | 9.266125e-52 | 6.387797e-49 |
MsG0080049040.01 | MsG0580024569.01 | 0.821121 | 4.777650e-53 | 3.852876e-50 |
MsG0080049068.01 | MsG0580024569.01 | 0.833023 | 6.766246e-56 | 7.696432e-53 |
MsG0180000246.01 | MsG0580024569.01 | 0.830805 | 2.387867e-55 | 2.543220e-52 |
MsG0180000599.01 | MsG0580024569.01 | 0.814016 | 1.909098e-51 | 1.266431e-48 |
MsG0180000670.01 | MsG0580024569.01 | 0.816739 | 4.735469e-52 | 3.383144e-49 |
MsG0180000677.01 | MsG0580024569.01 | 0.802115 | 6.537663e-49 | 3.176160e-46 |
MsG0180000678.01 | MsG0580024569.01 | 0.820916 | 5.326185e-53 | 4.270835e-50 |
MsG0180000784.01 | MsG0580024569.01 | 0.832779 | 7.778128e-56 | 8.782807e-53 |
MsG0180000785.01 | MsG0580024569.01 | 0.823713 | 1.194084e-53 | 1.036342e-50 |
MsG0180000843.01 | MsG0580024569.01 | 0.823630 | 1.248700e-53 | 1.081086e-50 |
MsG0180001085.01 | MsG0580024569.01 | 0.819093 | 1.392011e-52 | 1.060981e-49 |
MsG0180001100.01 | MsG0580024569.01 | 0.821975 | 3.033327e-53 | 2.505439e-50 |
MsG0180001105.01 | MsG0580024569.01 | 0.812833 | 3.474415e-51 | 2.232019e-48 |
MsG0180001270.01 | MsG0580024569.01 | 0.838445 | 2.864062e-57 | 3.837064e-54 |
MsG0180001371.01 | MsG0580024569.01 | 0.806631 | 7.490106e-50 | 4.085222e-47 |
MsG0180001610.01 | MsG0580024569.01 | 0.800813 | 1.208599e-48 | 5.681091e-46 |
MsG0180002399.01 | MsG0580024569.01 | 0.803986 | 2.682599e-49 | 1.367268e-46 |
MsG0180002700.01 | MsG0580024569.01 | 0.826300 | 2.926023e-54 | 2.733272e-51 |
MsG0180003353.01 | MsG0580024569.01 | 0.832220 | 1.070628e-55 | 1.188881e-52 |
MsG0180004103.01 | MsG0580024569.01 | 0.836496 | 9.045734e-57 | 1.141880e-53 |
MsG0180004192.01 | MsG0580024569.01 | 0.807984 | 3.869754e-50 | 2.186296e-47 |
MsG0180004194.01 | MsG0580024569.01 | 0.803007 | 4.281303e-49 | 2.127659e-46 |
MsG0180004246.01 | MsG0580024569.01 | 0.839911 | 1.193443e-57 | 1.672433e-54 |
MsG0180004448.01 | MsG0580024569.01 | 0.824024 | 1.009848e-53 | 8.839582e-51 |
MsG0180004735.01 | MsG0580024569.01 | 0.817630 | 2.985582e-52 | 2.185673e-49 |
MsG0180005349.01 | MsG0580024569.01 | 0.817126 | 3.875329e-52 | 2.798167e-49 |
MsG0180005391.01 | MsG0580024569.01 | 0.806284 | 8.864457e-50 | 4.792531e-47 |
MsG0180005418.01 | MsG0580024569.01 | 0.829433 | 5.162598e-55 | 5.282983e-52 |
MsG0180005803.01 | MsG0580024569.01 | 0.809688 | 1.672399e-50 | 9.884810e-48 |
MsG0180005807.01 | MsG0580024569.01 | 0.846768 | 1.764689e-59 | 3.070200e-56 |
MsG0180005829.01 | MsG0580024569.01 | 0.829723 | 4.387281e-55 | 4.528214e-52 |
MsG0180006031.01 | MsG0580024569.01 | 0.814373 | 1.592092e-51 | 1.066423e-48 |
MsG0280006309.01 | MsG0580024569.01 | 0.808320 | 3.281068e-50 | 1.870326e-47 |
MsG0280010564.01 | MsG0580024569.01 | 0.846615 | 1.943781e-59 | 3.364898e-56 |
MsG0280010569.01 | MsG0580024569.01 | 0.806307 | 8.764460e-50 | 4.741285e-47 |
MsG0280010926.01 | MsG0580024569.01 | 0.805883 | 1.076490e-49 | 5.760814e-47 |
MsG0280010975.01 | MsG0580024569.01 | 0.807993 | 3.852716e-50 | 2.177191e-47 |
MsG0280011073.01 | MsG0580024569.01 | 0.803996 | 2.670556e-49 | 1.361441e-46 |
MsG0280011255.01 | MsG0580024569.01 | 0.816562 | 5.188784e-52 | 3.689090e-49 |
MsG0280011411.01 | MsG0580024569.01 | 0.801679 | 8.034329e-49 | 3.860205e-46 |
MsG0380012567.01 | MsG0580024569.01 | 0.813418 | 2.586245e-51 | 1.688001e-48 |
MsG0380014909.01 | MsG0580024569.01 | 0.848594 | 5.548060e-60 | 1.023268e-56 |
MsG0480018584.01 | MsG0580024569.01 | 0.837220 | 5.910582e-57 | 7.625807e-54 |
MsG0480018850.01 | MsG0580024569.01 | 0.808650 | 2.789914e-50 | 1.604001e-47 |
MsG0480018911.01 | MsG0580024569.01 | 0.806963 | 6.371265e-50 | 3.505131e-47 |
MsG0480019007.01 | MsG0580024569.01 | 0.814363 | 1.600278e-51 | 1.071597e-48 |
MsG0480019971.01 | MsG0580024569.01 | 0.828231 | 1.008508e-54 | 9.963834e-52 |
MsG0480020502.01 | MsG0580024569.01 | 0.826436 | 2.715274e-54 | 2.546368e-51 |
MsG0480020690.01 | MsG0580024569.01 | 0.825298 | 5.058970e-54 | 4.592899e-51 |
MsG0480021168.01 | MsG0580024569.01 | 0.822209 | 2.677924e-53 | 2.226780e-50 |
MsG0480021248.01 | MsG0580024569.01 | 0.830186 | 3.384136e-55 | 3.539766e-52 |
MsG0480021294.01 | MsG0580024569.01 | 0.831145 | 1.970078e-55 | 2.119358e-52 |
MsG0480021377.01 | MsG0580024569.01 | 0.815895 | 7.312819e-52 | 5.104997e-49 |
MsG0480022355.01 | MsG0580024569.01 | 0.801802 | 7.582141e-49 | 3.654453e-46 |
MsG0480022537.01 | MsG0580024569.01 | 0.830927 | 2.229013e-55 | 2.382617e-52 |
MsG0480022617.01 | MsG0580024569.01 | 0.812828 | 3.483253e-51 | 2.237379e-48 |
MsG0480022624.01 | MsG0580024569.01 | 0.837924 | 3.900190e-57 | 5.142627e-54 |
MsG0480022647.01 | MsG0580024569.01 | 0.848106 | 7.571438e-60 | 1.374446e-56 |
MsG0480022918.01 | MsG0580024569.01 | 0.828751 | 7.552677e-55 | 7.575046e-52 |
MsG0480023150.01 | MsG0580024569.01 | 0.803274 | 3.768973e-49 | 1.886029e-46 |
MsG0480023216.01 | MsG0580024569.01 | 0.800432 | 1.445461e-48 | 6.729545e-46 |
MsG0480023381.01 | MsG0580024569.01 | 0.812735 | 3.650349e-51 | 2.339226e-48 |
MsG0480023389.01 | MsG0580024569.01 | 0.815545 | 8.752455e-52 | 6.052157e-49 |
MsG0480023845.01 | MsG0580024569.01 | 0.801331 | 9.472001e-49 | 4.511237e-46 |
MsG0480023867.01 | MsG0580024569.01 | 0.806406 | 8.355707e-50 | 4.531406e-47 |
MsG0480023877.01 | MsG0580024569.01 | 0.844543 | 7.086056e-59 | 1.147770e-55 |
MsG0480023990.01 | MsG0580024569.01 | 0.803352 | 3.632237e-49 | 1.821159e-46 |
MsG0480023992.01 | MsG0580024569.01 | 0.846417 | 2.201145e-59 | 3.786234e-56 |
MsG0580024285.01 | MsG0580024569.01 | 0.829110 | 6.181800e-55 | 6.266218e-52 |
MsG0580024569.01 | MsG0580024679.01 | 0.807899 | 4.033432e-50 | 2.273603e-47 |
MsG0580024569.01 | MsG0580024717.01 | 0.814422 | 1.553418e-51 | 1.041910e-48 |
MsG0580024569.01 | MsG0580024759.01 | 0.817487 | 3.214102e-52 | 2.343932e-49 |
MsG0580024569.01 | MsG0580024873.01 | 0.841366 | 4.964757e-58 | 7.278641e-55 |
MsG0580024569.01 | MsG0580025055.01 | 0.837538 | 4.898648e-57 | 6.382941e-54 |
MsG0580024569.01 | MsG0580025132.01 | 0.807943 | 3.947604e-50 | 2.227888e-47 |
MsG0580024569.01 | MsG0580025827.01 | 0.810308 | 1.229471e-50 | 7.385546e-48 |
MsG0580024569.01 | MsG0580025845.01 | 0.805232 | 1.474421e-49 | 7.759211e-47 |
MsG0580024569.01 | MsG0580025906.01 | 0.837309 | 5.607208e-57 | 7.254650e-54 |
MsG0580024569.01 | MsG0580026159.01 | -0.808380 | 3.187072e-50 | 1.819580e-47 |
MsG0580024569.01 | MsG0580026498.01 | 0.814819 | 1.268468e-51 | 8.599142e-49 |
MsG0580024569.01 | MsG0580027394.01 | 0.821971 | 3.039286e-53 | 2.510147e-50 |
MsG0580024569.01 | MsG0580027655.01 | 0.821416 | 4.084247e-53 | 3.320772e-50 |
MsG0580024569.01 | MsG0580027826.01 | 0.800176 | 1.629535e-48 | 7.537069e-46 |
MsG0580024569.01 | MsG0580028024.01 | 0.856681 | 2.728905e-62 | 6.564958e-59 |
MsG0580024569.01 | MsG0580028306.01 | 0.819217 | 1.304285e-52 | 9.975145e-50 |
MsG0580024569.01 | MsG0580028723.01 | 0.818173 | 2.250251e-52 | 1.672133e-49 |
MsG0580024569.01 | MsG0580029414.01 | 0.841699 | 4.054873e-58 | 6.006192e-55 |
MsG0580024569.01 | MsG0580029529.01 | 0.828034 | 1.124685e-54 | 1.104882e-51 |
MsG0580024569.01 | MsG0580029912.01 | 0.818487 | 1.911103e-52 | 1.432485e-49 |
MsG0580024569.01 | MsG0680030464.01 | 0.821219 | 4.536635e-53 | 3.668591e-50 |
MsG0580024569.01 | MsG0680030514.01 | 0.801639 | 8.188701e-49 | 3.930433e-46 |
MsG0580024569.01 | MsG0680030515.01 | 0.805447 | 1.329074e-49 | 7.033132e-47 |
MsG0580024569.01 | MsG0680030680.01 | 0.841902 | 3.584387e-58 | 5.343373e-55 |
MsG0580024569.01 | MsG0680030858.01 | 0.837556 | 4.847013e-57 | 6.319052e-54 |
MsG0580024569.01 | MsG0680031010.01 | 0.800744 | 1.248614e-48 | 5.859036e-46 |
MsG0580024569.01 | MsG0680031344.01 | 0.818813 | 1.611129e-52 | 1.218514e-49 |
MsG0580024569.01 | MsG0680031702.01 | 0.808917 | 2.446568e-50 | 1.416536e-47 |
MsG0580024569.01 | MsG0680032254.01 | 0.833456 | 5.278505e-56 | 6.082158e-53 |
MsG0580024569.01 | MsG0680032827.01 | 0.815450 | 9.186564e-52 | 6.335931e-49 |
MsG0580024569.01 | MsG0680032830.01 | 0.832352 | 9.929386e-56 | 1.106948e-52 |
MsG0580024569.01 | MsG0680033377.01 | 0.826597 | 2.485743e-54 | 2.341609e-51 |
MsG0580024569.01 | MsG0680034064.01 | 0.821912 | 3.136888e-53 | 2.586502e-50 |
MsG0580024569.01 | MsG0680034767.01 | 0.812824 | 3.489896e-51 | 2.241449e-48 |
MsG0580024569.01 | MsG0680035307.01 | 0.804954 | 1.685755e-49 | 8.808721e-47 |
MsG0580024569.01 | MsG0680035859.01 | 0.804999 | 1.649289e-49 | 8.627810e-47 |
MsG0580024569.01 | MsG0780036443.01 | 0.806112 | 9.634881e-50 | 5.186266e-47 |
MsG0580024569.01 | MsG0780036517.01 | 0.803069 | 4.157281e-49 | 2.069267e-46 |
MsG0580024569.01 | MsG0780036585.01 | 0.822547 | 2.234913e-53 | 1.876556e-50 |
MsG0580024569.01 | MsG0780036792.01 | 0.811626 | 6.371147e-51 | 3.963231e-48 |
MsG0580024569.01 | MsG0780036803.01 | 0.839004 | 2.052989e-57 | 2.797624e-54 |
MsG0580024569.01 | MsG0780037363.01 | 0.806655 | 7.403122e-50 | 4.040311e-47 |
MsG0580024569.01 | MsG0780037395.01 | 0.808767 | 2.634419e-50 | 1.519236e-47 |
MsG0580024569.01 | MsG0780037662.01 | 0.816439 | 5.526634e-52 | 3.915986e-49 |
MsG0580024569.01 | MsG0780037701.01 | 0.802825 | 4.667047e-49 | 2.309020e-46 |
MsG0580024569.01 | MsG0780038784.01 | 0.802492 | 5.467473e-49 | 2.681865e-46 |
MsG0580024569.01 | MsG0780039975.01 | 0.850180 | 2.006161e-60 | 3.896617e-57 |
MsG0580024569.01 | MsG0780040278.01 | 0.844654 | 6.612187e-59 | 1.074723e-55 |
MsG0580024569.01 | MsG0780040343.01 | 0.811577 | 6.529026e-51 | 4.056323e-48 |
MsG0580024569.01 | MsG0780041004.01 | 0.810230 | 1.278408e-50 | 7.663654e-48 |
MsG0580024569.01 | MsG0780041091.01 | 0.820244 | 7.599679e-53 | 5.980826e-50 |
MsG0580024569.01 | MsG0780041262.01 | 0.806300 | 8.794238e-50 | 4.756482e-47 |
MsG0580024569.01 | MsG0880041947.01 | 0.818256 | 2.154890e-52 | 1.604849e-49 |
MsG0580024569.01 | MsG0880042044.01 | 0.816861 | 4.445743e-52 | 3.186850e-49 |
MsG0580024569.01 | MsG0880042290.01 | 0.808585 | 2.881237e-50 | 1.653714e-47 |
MsG0580024569.01 | MsG0880044043.01 | 0.802930 | 4.441190e-49 | 2.202898e-46 |
MsG0580024569.01 | MsG0880044392.01 | 0.831855 | 1.317472e-55 | 1.447655e-52 |
MsG0580024569.01 | MsG0880044487.01 | 0.864632 | 1.057340e-64 | 3.343189e-61 |
MsG0580024569.01 | MsG0880044538.01 | 0.809982 | 1.445829e-50 | 8.611964e-48 |
MsG0580024569.01 | MsG0880044691.01 | 0.811195 | 7.906543e-51 | 4.862825e-48 |
MsG0580024569.01 | MsG0880045044.01 | 0.802375 | 5.781422e-49 | 2.827606e-46 |
MsG0580024569.01 | MsG0880045285.01 | 0.823701 | 1.202114e-53 | 1.042956e-50 |
MsG0580024569.01 | MsG0880045533.01 | 0.810926 | 9.038987e-51 | 5.520441e-48 |
MsG0580024569.01 | MsG0880045668.01 | 0.806019 | 1.008030e-49 | 5.413299e-47 |
MsG0580024569.01 | MsG0880045722.01 | 0.814369 | 1.595370e-51 | 1.068495e-48 |
MsG0580024569.01 | MsG0880046334.01 | -0.806571 | 7.710838e-50 | 4.199454e-47 |
MsG0580024569.01 | MsG0880046583.01 | 0.813409 | 2.597809e-51 | 1.695180e-48 |
MsG0580024569.01 | MsG0880046723.01 | 0.824097 | 9.708692e-54 | 8.516147e-51 |
MsG0580024569.01 | MsG0880046736.01 | 0.818804 | 1.619283e-52 | 1.224342e-49 |
MsG0580024569.01 | MsG0880046764.01 | 0.820294 | 7.399542e-53 | 5.831503e-50 |
MsG0580024569.01 | MsG0880046765.01 | 0.852185 | 5.449265e-61 | 1.129560e-57 |
MsG0580024569.01 | MsG0880047322.01 | 0.820493 | 6.662031e-53 | 5.279343e-50 |
MsG0580024569.01 | MsG0880047394.01 | 0.841342 | 5.036363e-58 | 7.377590e-55 |
MsG0580024569.01 | MsG0880047451.01 | 0.801696 | 7.972384e-49 | 3.832024e-46 |
MsG0580024569.01 | MsG0880047538.01 | 0.812307 | 4.527808e-51 | 2.868769e-48 |
MsG0580024569.01 | MsG0880047754.01 | 0.804257 | 2.355724e-49 | 1.208945e-46 |
MsG0380015438.01 | MsG0580024569.01 | 0.805526 | 1.279463e-49 | 6.784139e-47 |
MsG0380015603.01 | MsG0580024569.01 | 0.808436 | 3.100143e-50 | 1.772573e-47 |
MsG0380015784.01 | MsG0580024569.01 | 0.832978 | 6.942041e-56 | 7.885707e-53 |
MsG0380015896.01 | MsG0580024569.01 | 0.831196 | 1.914620e-55 | 2.062739e-52 |
MsG0380016057.01 | MsG0580024569.01 | 0.837755 | 4.310302e-57 | 5.654671e-54 |
MsG0380016194.01 | MsG0580024569.01 | 0.827385 | 1.610748e-54 | 1.552843e-51 |
MsG0380016284.01 | MsG0580024569.01 | 0.861175 | 1.233952e-63 | 3.459917e-60 |
MsG0380016540.01 | MsG0580024569.01 | 0.807905 | 4.022753e-50 | 2.267860e-47 |
MsG0380016762.01 | MsG0580024569.01 | 0.803654 | 3.144078e-49 | 1.588728e-46 |
MsG0380016864.01 | MsG0580024569.01 | 0.814464 | 1.520258e-51 | 1.020830e-48 |
MsG0380017087.01 | MsG0580024569.01 | 0.814179 | 1.757972e-51 | 1.171316e-48 |
MsG0380017293.01 | MsG0580024569.01 | 0.806765 | 7.016910e-50 | 3.840564e-47 |
MsG0380017661.01 | MsG0580024569.01 | 0.802875 | 4.559290e-49 | 2.258343e-46 |
MsG0380017931.01 | MsG0580024569.01 | 0.821889 | 3.175320e-53 | 2.616506e-50 |
MsG0380018037.01 | MsG0580024569.01 | 0.867014 | 1.869833e-65 | 6.429957e-62 |
MsG0380018069.01 | MsG0580024569.01 | 0.830551 | 2.755027e-55 | 2.912108e-52 |
MsG0480018218.01 | MsG0580024569.01 | 0.801584 | 8.405490e-49 | 4.028808e-46 |
MsG0280006996.01 | MsG0580024569.01 | 0.837282 | 5.699527e-57 | 7.367643e-54 |
MsG0280007118.01 | MsG0580024569.01 | 0.809188 | 2.140530e-50 | 1.248455e-47 |
MsG0280007575.01 | MsG0580024569.01 | 0.815042 | 1.132370e-51 | 7.722875e-49 |
MsG0280007647.01 | MsG0580024569.01 | 0.800540 | 1.374146e-48 | 6.414739e-46 |
MsG0280007850.01 | MsG0580024569.01 | 0.803011 | 4.273546e-49 | 2.123987e-46 |
MsG0280007976.01 | MsG0580024569.01 | 0.809272 | 2.053346e-50 | 1.200281e-47 |
MsG0280008709.01 | MsG0580024569.01 | 0.835991 | 1.215547e-56 | 1.511347e-53 |
MsG0280008928.01 | MsG0580024569.01 | 0.820243 | 7.604731e-53 | 5.984685e-50 |
MsG0280008929.01 | MsG0580024569.01 | 0.818372 | 2.028563e-52 | 1.515824e-49 |
MsG0280008942.01 | MsG0580024569.01 | 0.809620 | 1.729112e-50 | 1.020225e-47 |
MsG0280009256.01 | MsG0580024569.01 | 0.824320 | 8.602807e-54 | 7.593838e-51 |
MsG0280009685.01 | MsG0580024569.01 | 0.812604 | 3.900323e-51 | 2.490695e-48 |
MsG0280009708.01 | MsG0580024569.01 | 0.819102 | 1.385153e-52 | 1.056046e-49 |
MsG0280009756.01 | MsG0580024569.01 | 0.832632 | 8.461579e-56 | 9.512588e-53 |
MsG0280009869.01 | MsG0580024569.01 | 0.803048 | 4.197785e-49 | 2.088423e-46 |
MsG0280009953.01 | MsG0580024569.01 | 0.820221 | 7.692043e-53 | 6.049747e-50 |
MsG0280010353.01 | MsG0580024569.01 | 0.813793 | 2.138144e-51 | 1.409797e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024569.01.T01 | MTR_5g013280 | 88.933 | 253 | 15 | 1 | 117 | 356 | 43 | 295 | 6.49e-146 | 414 |
MsG0580024569.01.T01 | MTR_5g013280 | 89.113 | 248 | 14 | 1 | 122 | 356 | 1 | 248 | 9.83e-144 | 407 |
MsG0580024569.01.T01 | MTR_5g013280 | 88.745 | 231 | 13 | 1 | 117 | 334 | 43 | 273 | 9.12e-128 | 368 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024569.01.T01 | AT4G17540 | 39.600 | 250 | 106 | 5 | 117 | 349 | 61 | 282 | 1.86e-40 | 144 |
Find 88 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCCATTTACTTTGAAATT+TGG | 0.141463 | 5:+6440641 | MsG0580024569.01.T01:CDS |
TGTCCAAATTTCAAAGTAAA+TGG | 0.158302 | 5:-6440644 | None:intergenic |
GTTGGAAGCCCTTTAAATTT+AGG | 0.210875 | 5:+6440710 | MsG0580024569.01.T01:CDS |
GGACAAGTATTTACTGGTTT+TGG | 0.211578 | 5:+6440662 | MsG0580024569.01.T01:CDS |
TAAGGGAGATCTCACGGTTT+AGG | 0.233689 | 5:-6443982 | None:intergenic |
GCTTGCACGTTATCGCTTAA+AGG | 0.246676 | 5:+6443953 | MsG0580024569.01.T01:three_prime_UTR |
CTTCCAATTTCACATTACTA+TGG | 0.260859 | 5:+6440761 | MsG0580024569.01.T01:CDS |
AGAGTAGTACCTAAATTTAA+AGG | 0.274370 | 5:-6440719 | None:intergenic |
AATCCATAGTAATGTGAAAT+TGG | 0.287540 | 5:-6440764 | None:intergenic |
AAGGGAGATCTCACGGTTTA+GGG | 0.290126 | 5:-6443981 | None:intergenic |
TCTTATTCTGAATTTGTTGT+AGG | 0.290258 | 5:+6440932 | MsG0580024569.01.T01:CDS |
GCCACAGGCGCAGTCAGTTC+TGG | 0.305051 | 5:+6442029 | MsG0580024569.01.T01:CDS |
TTTCACATTACTATGGATTT+CGG | 0.306882 | 5:+6440768 | MsG0580024569.01.T01:CDS |
TTCATATAGTTGAGGAAGAT+TGG | 0.320215 | 5:+6441116 | MsG0580024569.01.T01:intron |
AAATTTGGACAAGTATTTAC+TGG | 0.322518 | 5:+6440656 | MsG0580024569.01.T01:CDS |
CAAGTTCTTCAATCATTTGC+TGG | 0.323313 | 5:-6443746 | None:intergenic |
TGTGAAATTGGAAGAGAATA+AGG | 0.333431 | 5:-6440752 | None:intergenic |
CAGTTATCTCAAGGTCTAGT+AGG | 0.335039 | 5:+6442086 | MsG0580024569.01.T01:CDS |
CTACAAGTTGCCCCTGCTAA+TGG | 0.340138 | 5:+6444023 | MsG0580024569.01.T01:three_prime_UTR |
GTTGGATGTGGAGTTGGTTT+CGG | 0.345001 | 5:+6441161 | MsG0580024569.01.T01:CDS |
CTTGCACGTTATCGCTTAAA+GGG | 0.350496 | 5:+6443954 | MsG0580024569.01.T01:three_prime_UTR |
ACAAAGATGATGATGAAGTT+TGG | 0.354809 | 5:+6441951 | MsG0580024569.01.T01:CDS |
ACCCGGATTAAACGGTAAAC+TGG | 0.357165 | 5:-6441982 | None:intergenic |
AGAACTAGCTTCAAGTTTGC+TGG | 0.358017 | 5:-6443823 | None:intergenic |
TCCCAGTTTACCGTTTAATC+CGG | 0.367717 | 5:+6441980 | MsG0580024569.01.T01:CDS |
TACAAGTTGCCCCTGCTAAT+GGG | 0.377837 | 5:+6444024 | MsG0580024569.01.T01:three_prime_UTR |
AAACTTGAAGCTAGTTCTTC+AGG | 0.400339 | 5:+6443828 | MsG0580024569.01.T01:CDS |
TCAACCAATGAACATTGGTT+TGG | 0.414979 | 5:+6442112 | MsG0580024569.01.T01:CDS |
TCTGCAAAATCCACTGTTGA+AGG | 0.419732 | 5:+6442214 | MsG0580024569.01.T01:CDS |
AAAGCCAAACCAATGTTCAT+TGG | 0.422194 | 5:-6442116 | None:intergenic |
GAGTAGTACCTAAATTTAAA+GGG | 0.424503 | 5:-6440718 | None:intergenic |
GTGGGTGTTGGATGTGGAGT+TGG | 0.433318 | 5:+6441155 | MsG0580024569.01.T01:CDS |
GGCAATGCACCCGGATTAAA+CGG | 0.440473 | 5:-6441990 | None:intergenic |
CATTAGCAGGGGCAACTTGT+AGG | 0.443920 | 5:-6444022 | None:intergenic |
ATCAAGTTATGAGTGCTACT+AGG | 0.451482 | 5:+6440972 | MsG0580024569.01.T01:CDS |
TGCGCCTGTGGCACTTTGTA+AGG | 0.455121 | 5:-6442018 | None:intergenic |
TTTGGAATCGGTTGTGGAGT+TGG | 0.458433 | 5:+6440680 | MsG0580024569.01.T01:CDS |
ATGAGAGCTTACTGATTCGC+TGG | 0.460415 | 5:-6442252 | None:intergenic |
TCAAGTTATGAGTGCTACTA+GGG | 0.471040 | 5:+6440973 | MsG0580024569.01.T01:CDS |
TTGGTAAGTAACCCATTAGC+AGG | 0.472572 | 5:-6444035 | None:intergenic |
TGTGGAGTTGGTTTCGGTCA+TGG | 0.472934 | 5:+6441167 | MsG0580024569.01.T01:CDS |
ACAGGACTTGCTGTGAAACC+TGG | 0.477065 | 5:+6441802 | MsG0580024569.01.T01:intron |
GTTGGTTTCGGTCATGGTGT+TGG | 0.481887 | 5:+6441173 | MsG0580024569.01.T01:CDS |
ATTGAAGTGGGTGTTGGATG+TGG | 0.485704 | 5:+6441149 | MsG0580024569.01.T01:CDS |
TGGAGGAAAATGAGAAGCTT+CGG | 0.486885 | 5:+6443769 | MsG0580024569.01.T01:CDS |
CCTCCTTCTCCCTTCAACAG+TGG | 0.488432 | 5:-6442224 | None:intergenic |
ACTTCAGCCGACTCTACATA+TGG | 0.500649 | 5:+6442161 | MsG0580024569.01.T01:CDS |
TGTGGAGTTGGTATCGGTGT+TGG | 0.502325 | 5:+6440692 | MsG0580024569.01.T01:CDS |
TTCGGTCATGGTGTTGGAGT+TGG | 0.502955 | 5:+6441179 | MsG0580024569.01.T01:CDS |
CCCAGTTTACCGTTTAATCC+GGG | 0.504429 | 5:+6441981 | MsG0580024569.01.T01:CDS |
TGAATTTGATTCAACACCCC+AGG | 0.508485 | 5:-6441820 | None:intergenic |
AAGAAAACAAAGAAGAAAGT+AGG | 0.525920 | 5:+6443896 | MsG0580024569.01.T01:CDS |
TCCAGAACTGACTGCGCCTG+TGG | 0.525943 | 5:-6442030 | None:intergenic |
CACTCAAAACAATCAGTACA+TGG | 0.527145 | 5:-6443870 | None:intergenic |
CTGCAAAATCCACTGTTGAA+GGG | 0.528070 | 5:+6442215 | MsG0580024569.01.T01:CDS |
AAGAATATTGAAGTGGGTGT+TGG | 0.528611 | 5:+6441143 | MsG0580024569.01.T01:CDS |
ATCGGTTGTGGAGTTGGTAT+CGG | 0.538819 | 5:+6440686 | MsG0580024569.01.T01:CDS |
GTGGCACTTTGTAAGGATGC+TGG | 0.546253 | 5:-6442011 | None:intergenic |
GAAGAGAATAAGGAAGGGAA+AGG | 0.553142 | 5:-6440742 | None:intergenic |
CCCGGATTAAACGGTAAACT+GGG | 0.556288 | 5:-6441981 | None:intergenic |
GCAAATGATTGAAGAACTTG+TGG | 0.559081 | 5:+6443749 | MsG0580024569.01.T01:CDS |
AAGGATGCTGGCAATGCACC+CGG | 0.560291 | 5:-6441999 | None:intergenic |
GCATCCTTACAAAGTGCCAC+AGG | 0.560303 | 5:+6442014 | MsG0580024569.01.T01:CDS |
CAGGACTTGCTGTGAAACCT+GGG | 0.561209 | 5:+6441803 | MsG0580024569.01.T01:intron |
AGTTATCTCAAGGTCTAGTA+GGG | 0.564091 | 5:+6442087 | MsG0580024569.01.T01:CDS |
AAATTGGAAGAGAATAAGGA+AGG | 0.564608 | 5:-6440748 | None:intergenic |
TGGTAAGTAACCCATTAGCA+GGG | 0.583261 | 5:-6444034 | None:intergenic |
CTAGCTTCAAGTTTGCTGGA+TGG | 0.583563 | 5:-6443819 | None:intergenic |
TGAGAGCTTACTGATTCGCT+GGG | 0.586043 | 5:-6442251 | None:intergenic |
AATCCACTGTTGAAGGGAGA+AGG | 0.589188 | 5:+6442221 | MsG0580024569.01.T01:CDS |
TCAGCTGATCAGTTATCTCA+AGG | 0.590242 | 5:+6442077 | MsG0580024569.01.T01:CDS |
ATATGGCAGTCGAACTGAGA+AGG | 0.597072 | 5:+6442178 | MsG0580024569.01.T01:CDS |
TGGAGCTAAGAATATTGAAG+TGG | 0.597204 | 5:+6441136 | MsG0580024569.01.T01:CDS |
CCACTGTTGAAGGGAGAAGG+AGG | 0.603974 | 5:+6442224 | MsG0580024569.01.T01:CDS |
GGAGCTAAGAATATTGAAGT+GGG | 0.605534 | 5:+6441137 | MsG0580024569.01.T01:CDS |
AATGATTGAAGAACTTGTGG+AGG | 0.616671 | 5:+6443752 | MsG0580024569.01.T01:CDS |
AATTGGAAGAGAATAAGGAA+GGG | 0.619947 | 5:-6440747 | None:intergenic |
CTGTTGAAGGGAGAAGGAGG+AGG | 0.623525 | 5:+6442227 | MsG0580024569.01.T01:CDS |
TCGACTGCCATATGTAGAGT+CGG | 0.624499 | 5:-6442168 | None:intergenic |
GGGTCTCAACCAATGAACAT+TGG | 0.632984 | 5:+6442107 | MsG0580024569.01.T01:CDS |
AAAAGGTAATAAGAGATACA+TGG | 0.637767 | 5:-6440840 | None:intergenic |
GCTTCGGCAGATACTAGTGA+AGG | 0.640377 | 5:+6443785 | MsG0580024569.01.T01:CDS |
CTCATAACTTGATTCAACAT+CGG | 0.655826 | 5:-6440962 | None:intergenic |
TTGCACGTTATCGCTTAAAG+GGG | 0.660290 | 5:+6443955 | MsG0580024569.01.T01:three_prime_UTR |
AGGGAGATCTCACGGTTTAG+GGG | 0.678296 | 5:-6443980 | None:intergenic |
GGTAAGTAACCCATTAGCAG+GGG | 0.690059 | 5:-6444033 | None:intergenic |
AGGACTTGCTGTGAAACCTG+GGG | 0.707838 | 5:+6441804 | MsG0580024569.01.T01:intron |
CAAGTTATGAGTGCTACTAG+GGG | 0.719794 | 5:+6440974 | MsG0580024569.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAGTGAAAA+AGG | - | Chr5:6440860-6440879 | None:intergenic | 10.0% |
!! | AACTAAATATGTATATATAT+TGG | - | Chr5:6443440-6443459 | None:intergenic | 10.0% |
!!! | AATTTTACAAAATACTATTT+TGG | - | Chr5:6442677-6442696 | None:intergenic | 10.0% |
!!! | TATTGTTATTTTTTTCTAAA+CGG | + | Chr5:6442840-6442859 | MsG0580024569.01.T01:intron | 10.0% |
!!! | CAAATTTTTTTAGATCATTT+AGG | + | Chr5:6441350-6441369 | MsG0580024569.01.T01:intron | 15.0% |
!!! | TGTTTATTTATTTTTTCCTA+TGG | + | Chr5:6443706-6443725 | MsG0580024569.01.T01:intron | 15.0% |
!!! | TTGTTTCTTTATATACTTTT+TGG | + | Chr5:6443285-6443304 | MsG0580024569.01.T01:intron | 15.0% |
!!! | TTTTCTTTTATTATTATGAC+AGG | + | Chr5:6441784-6441803 | MsG0580024569.01.T01:intron | 15.0% |
!!! | TTTTGAATTATTGATCATTT+AGG | + | Chr5:6441297-6441316 | MsG0580024569.01.T01:intron | 15.0% |
!! | TGTAACTTTAAGTGTATTTA+GGG | + | Chr5:6441271-6441290 | MsG0580024569.01.T01:intron | 20.0% |
!! | TTGTAACTTTAAGTGTATTT+AGG | + | Chr5:6441270-6441289 | MsG0580024569.01.T01:intron | 20.0% |
!! | TTTCAAATATCACATTTGTT+TGG | + | Chr5:6443046-6443065 | MsG0580024569.01.T01:intron | 20.0% |
!!! | AATCCATTTACTTTGAAATT+TGG | + | Chr5:6440641-6440660 | MsG0580024569.01.T01:CDS | 20.0% |
!!! | ATCTATTCATGAGTTTTTTT+TGG | - | Chr5:6442701-6442720 | None:intergenic | 20.0% |
!!! | CATAATATTGAAAATTTTCC+AGG | + | Chr5:6441382-6441401 | MsG0580024569.01.T01:intron | 20.0% |
!!! | TCTATTCATGAGTTTTTTTT+GGG | - | Chr5:6442700-6442719 | None:intergenic | 20.0% |
!!! | TTATTTTTTCCTATGGTTAT+AGG | + | Chr5:6443713-6443732 | MsG0580024569.01.T01:intron | 20.0% |
! | AAAAGGTAATAAGAGATACA+TGG | - | Chr5:6440843-6440862 | None:intergenic | 25.0% |
! | AAACTCATGAATAGATATGT+TGG | + | Chr5:6442705-6442724 | MsG0580024569.01.T01:intron | 25.0% |
! | AAAGAAAATATGGAAAGGAT+GGG | - | Chr5:6441674-6441693 | None:intergenic | 25.0% |
! | AAATTTGGACAAGTATTTAC+TGG | + | Chr5:6440656-6440675 | MsG0580024569.01.T01:CDS | 25.0% |
! | AACAAGACCCAAAAAATTAA+GGG | - | Chr5:6444002-6444021 | None:intergenic | 25.0% |
! | AACTCATGAATAGATATGTT+GGG | + | Chr5:6442706-6442725 | MsG0580024569.01.T01:intron | 25.0% |
! | AAGAAAACAAAGAAGAAAGT+AGG | + | Chr5:6443896-6443915 | MsG0580024569.01.T01:CDS | 25.0% |
! | AATCCATAGTAATGTGAAAT+TGG | - | Chr5:6440767-6440786 | None:intergenic | 25.0% |
! | AGAGTAGTACCTAAATTTAA+AGG | - | Chr5:6440722-6440741 | None:intergenic | 25.0% |
! | ATCTATGATCTATAATAGAC+AGG | - | Chr5:6441445-6441464 | None:intergenic | 25.0% |
! | ATGAAGTGGTAAAGAAAATA+TGG | - | Chr5:6441684-6441703 | None:intergenic | 25.0% |
! | CTCAAGAAAATTTAAGTACA+AGG | + | Chr5:6443092-6443111 | MsG0580024569.01.T01:intron | 25.0% |
! | GAGTAGTACCTAAATTTAAA+GGG | - | Chr5:6440721-6440740 | None:intergenic | 25.0% |
! | TAAAAAATCCTCATTCCAAA+TGG | - | Chr5:6442491-6442510 | None:intergenic | 25.0% |
! | TAAAGAAAATATGGAAAGGA+TGG | - | Chr5:6441675-6441694 | None:intergenic | 25.0% |
! | TGAATTATTGATCATTTAGG+AGG | + | Chr5:6441300-6441319 | MsG0580024569.01.T01:intron | 25.0% |
! | TGTCCAAATTTCAAAGTAAA+TGG | - | Chr5:6440647-6440666 | None:intergenic | 25.0% |
! | TTAAACATGAGATACACAAA+AGG | - | Chr5:6441906-6441925 | None:intergenic | 25.0% |
! | TTTCACATTACTATGGATTT+CGG | + | Chr5:6440768-6440787 | MsG0580024569.01.T01:CDS | 25.0% |
!! | AATATTGAAAATTTTCCAGG+AGG | + | Chr5:6441385-6441404 | MsG0580024569.01.T01:intron | 25.0% |
!! | ATTTTCTTTACCACTTCATA+TGG | + | Chr5:6441685-6441704 | MsG0580024569.01.T01:intron | 25.0% |
!! | TGATATTTAAGATACATTGC+AGG | + | Chr5:6443535-6443554 | MsG0580024569.01.T01:intron | 25.0% |
!! | TTAAATTTTCTTGAGACAGA+GGG | - | Chr5:6443087-6443106 | None:intergenic | 25.0% |
!! | TTTTCTTTACCACTTCATAT+GGG | + | Chr5:6441686-6441705 | MsG0580024569.01.T01:intron | 25.0% |
!!! | ACTTGTTTTTCATATAGTTG+AGG | + | Chr5:6441108-6441127 | MsG0580024569.01.T01:intron | 25.0% |
!!! | ATTTGGAATGAGGATTTTTT+AGG | + | Chr5:6442490-6442509 | MsG0580024569.01.T01:intron | 25.0% |
!!! | GTTTTTTAATATACAGTTCG+AGG | - | Chr5:6441483-6441502 | None:intergenic | 25.0% |
!!! | TCTTATTCTGAATTTGTTGT+AGG | + | Chr5:6440932-6440951 | MsG0580024569.01.T01:CDS | 25.0% |
!!! | TTTGGAATGAGGATTTTTTA+GGG | + | Chr5:6442491-6442510 | MsG0580024569.01.T01:intron | 25.0% |
AAAAATTAAGGGAGATCTCA+CGG | - | Chr5:6443991-6444010 | None:intergenic | 30.0% | |
AAATTGGAAGAGAATAAGGA+AGG | - | Chr5:6440751-6440770 | None:intergenic | 30.0% | |
AATTGGAAGAGAATAAGGAA+GGG | - | Chr5:6440750-6440769 | None:intergenic | 30.0% | |
ACTCATGAATAGATATGTTG+GGG | + | Chr5:6442707-6442726 | MsG0580024569.01.T01:intron | 30.0% | |
AGAGAACAAAATACTTCAGA+TGG | + | Chr5:6443574-6443593 | MsG0580024569.01.T01:intron | 30.0% | |
CACTTTATGCTTCACATAAA+TGG | + | Chr5:6442392-6442411 | MsG0580024569.01.T01:intron | 30.0% | |
CTCATAACTTGATTCAACAT+CGG | - | Chr5:6440965-6440984 | None:intergenic | 30.0% | |
CTTCCAATTTCACATTACTA+TGG | + | Chr5:6440761-6440780 | MsG0580024569.01.T01:CDS | 30.0% | |
GAACAAGACCCAAAAAATTA+AGG | - | Chr5:6444003-6444022 | None:intergenic | 30.0% | |
GTGGTAAAGAAAATATGGAA+AGG | - | Chr5:6441679-6441698 | None:intergenic | 30.0% | |
GTTTCAAAACCTATAACCAT+AGG | - | Chr5:6443725-6443744 | None:intergenic | 30.0% | |
TGAAGAATGTTCACAAAACA+TGG | - | Chr5:6441749-6441768 | None:intergenic | 30.0% | |
TGTGAAATTGGAAGAGAATA+AGG | - | Chr5:6440755-6440774 | None:intergenic | 30.0% | |
TTCATATAGTTGAGGAAGAT+TGG | + | Chr5:6441116-6441135 | MsG0580024569.01.T01:intron | 30.0% | |
TTGTTGAGACTGGAAAAATA+TGG | + | Chr5:6443144-6443163 | MsG0580024569.01.T01:intron | 30.0% | |
! | ACAAAGATGATGATGAAGTT+TGG | + | Chr5:6441951-6441970 | MsG0580024569.01.T01:CDS | 30.0% |
! | CTTAAATTTTCTTGAGACAG+AGG | - | Chr5:6443088-6443107 | None:intergenic | 30.0% |
! | GCAAGAATCAAATTTTTCCT+AGG | - | Chr5:6442628-6442647 | None:intergenic | 30.0% |
! | TAAATTTTCTTGAGACAGAG+GGG | - | Chr5:6443086-6443105 | None:intergenic | 30.0% |
! | TTTGGAAAACCAAACACTTT+TGG | - | Chr5:6442659-6442678 | None:intergenic | 30.0% |
!! | TACTTTTTGGTGATTAACTG+TGG | + | Chr5:6443298-6443317 | MsG0580024569.01.T01:intron | 30.0% |
!!! | AGATACATGGTTTTTGAGTA+GGG | - | Chr5:6440830-6440849 | None:intergenic | 30.0% |
!!! | AGGATTTTTTAGGGCTATAA+GGG | + | Chr5:6442500-6442519 | MsG0580024569.01.T01:intron | 30.0% |
!!! | CATACTTTTCCAAAAGTGTT+TGG | + | Chr5:6442647-6442666 | MsG0580024569.01.T01:intron | 30.0% |
!!! | GAGATCTCCCTTAATTTTTT+GGG | + | Chr5:6443992-6444011 | MsG0580024569.01.T01:three_prime_UTR | 30.0% |
!!! | GTATTTACTGGTTTTGGAAT+CGG | + | Chr5:6440668-6440687 | MsG0580024569.01.T01:CDS | 30.0% |
!!! | TGAGATCTCCCTTAATTTTT+TGG | + | Chr5:6443991-6444010 | MsG0580024569.01.T01:three_prime_UTR | 30.0% |
!!! | TTGTTGATTTTTTTTTGCGC+TGG | + | Chr5:6443660-6443679 | MsG0580024569.01.T01:intron | 30.0% |
!!! | TTTTGGCGATAATGGAATTT+GGG | + | Chr5:6442730-6442749 | MsG0580024569.01.T01:intron | 30.0% |
!!! | TTTTTGAGTAGGGGAATTTT+GGG | - | Chr5:6440820-6440839 | None:intergenic | 30.0% |
!!! | TTTTTTCTAAACGGTATCCT+GGG | + | Chr5:6442849-6442868 | MsG0580024569.01.T01:intron | 30.0% |
!!! | TTTTTTTCTAAACGGTATCC+TGG | + | Chr5:6442848-6442867 | MsG0580024569.01.T01:intron | 30.0% |
AAAGCCAAACCAATGTTCAT+TGG | - | Chr5:6442119-6442138 | None:intergenic | 35.0% | |
AAATATGGAAAGGATGGGAT+AGG | - | Chr5:6441669-6441688 | None:intergenic | 35.0% | |
AAATATGGTTATCTGCTGAG+AGG | + | Chr5:6443159-6443178 | MsG0580024569.01.T01:intron | 35.0% | |
AAGAATATTGAAGTGGGTGT+TGG | + | Chr5:6441143-6441162 | MsG0580024569.01.T01:CDS | 35.0% | |
AATGATTGAAGAACTTGTGG+AGG | + | Chr5:6443752-6443771 | MsG0580024569.01.T01:CDS | 35.0% | |
AGTTATCTCAAGGTCTAGTA+GGG | + | Chr5:6442087-6442106 | MsG0580024569.01.T01:CDS | 35.0% | |
CAAGTTCTTCAATCATTTGC+TGG | - | Chr5:6443749-6443768 | None:intergenic | 35.0% | |
CACTCAAAACAATCAGTACA+TGG | - | Chr5:6443873-6443892 | None:intergenic | 35.0% | |
CAGAAAAAACTCACGAAAGA+GGG | - | Chr5:6443489-6443508 | None:intergenic | 35.0% | |
CATCTTTGTCATTGTCATCT+AGG | - | Chr5:6441940-6441959 | None:intergenic | 35.0% | |
GCAAATGATTGAAGAACTTG+TGG | + | Chr5:6443749-6443768 | MsG0580024569.01.T01:CDS | 35.0% | |
GCTGTTTAAATTGTTGAGAC+TGG | + | Chr5:6443134-6443153 | MsG0580024569.01.T01:intron | 35.0% | |
GCTTCAATGATCAGAAGAAA+AGG | - | Chr5:6442314-6442333 | None:intergenic | 35.0% | |
GGAGCTAAGAATATTGAAGT+GGG | + | Chr5:6441137-6441156 | MsG0580024569.01.T01:CDS | 35.0% | |
GGTGATTAACTGTGGTATTT+GGG | + | Chr5:6443306-6443325 | MsG0580024569.01.T01:intron | 35.0% | |
GTTGGAAGCCCTTTAAATTT+AGG | + | Chr5:6440710-6440729 | MsG0580024569.01.T01:CDS | 35.0% | |
TCAGAAAAAACTCACGAAAG+AGG | - | Chr5:6443490-6443509 | None:intergenic | 35.0% | |
TCCTCATTCCAAATGGAAAA+TGG | - | Chr5:6442484-6442503 | None:intergenic | 35.0% | |
TGAAGCAGAAGATGTTGTTA+GGG | + | Chr5:6441556-6441575 | MsG0580024569.01.T01:intron | 35.0% | |
TGGAGCTAAGAATATTGAAG+TGG | + | Chr5:6441136-6441155 | MsG0580024569.01.T01:CDS | 35.0% | |
TGGTGATTAACTGTGGTATT+TGG | + | Chr5:6443305-6443324 | MsG0580024569.01.T01:intron | 35.0% | |
TTGAAGCAGAAGATGTTGTT+AGG | + | Chr5:6441555-6441574 | MsG0580024569.01.T01:intron | 35.0% | |
! | AAACTTGAAGCTAGTTCTTC+AGG | + | Chr5:6443828-6443847 | MsG0580024569.01.T01:CDS | 35.0% |
! | AATGTTCGCGTATTGTTTTC+AGG | - | Chr5:6442985-6443004 | None:intergenic | 35.0% |
! | ATCAAGTTATGAGTGCTACT+AGG | + | Chr5:6440972-6440991 | MsG0580024569.01.T01:CDS | 35.0% |
! | ATTTAAGATACATTGCAGGC+TGG | + | Chr5:6443539-6443558 | MsG0580024569.01.T01:intron | 35.0% |
! | CTGTGTGACAATTTTAAACG+AGG | + | Chr5:6443250-6443269 | MsG0580024569.01.T01:intron | 35.0% |
! | GAATAGATATGTTGGGGTTT+TGG | + | Chr5:6442713-6442732 | MsG0580024569.01.T01:intron | 35.0% |
! | TCAACCAATGAACATTGGTT+TGG | + | Chr5:6442112-6442131 | MsG0580024569.01.T01:CDS | 35.0% |
! | TCAAGTTATGAGTGCTACTA+GGG | + | Chr5:6440973-6440992 | MsG0580024569.01.T01:CDS | 35.0% |
! | TTGAAAATTTTCCAGGAGGT+AGG | + | Chr5:6441389-6441408 | MsG0580024569.01.T01:intron | 35.0% |
!! | ACCATTTTCCATTTGGAATG+AGG | + | Chr5:6442480-6442499 | MsG0580024569.01.T01:intron | 35.0% |
!! | TTTTGAGTAGGGGAATTTTG+GGG | - | Chr5:6440819-6440838 | None:intergenic | 35.0% |
!!! | ATTTTTTAGGGCTATAAGGG+AGG | + | Chr5:6442503-6442522 | MsG0580024569.01.T01:intron | 35.0% |
!!! | GAGATACATGGTTTTTGAGT+AGG | - | Chr5:6440831-6440850 | None:intergenic | 35.0% |
!!! | GAGGATTTTTTAGGGCTATA+AGG | + | Chr5:6442499-6442518 | MsG0580024569.01.T01:intron | 35.0% |
!!! | GATACATGGTTTTTGAGTAG+GGG | - | Chr5:6440829-6440848 | None:intergenic | 35.0% |
!!! | GGACAAGTATTTACTGGTTT+TGG | + | Chr5:6440662-6440681 | MsG0580024569.01.T01:CDS | 35.0% |
!!! | GTTTTGGCGATAATGGAATT+TGG | + | Chr5:6442729-6442748 | MsG0580024569.01.T01:intron | 35.0% |
!!! | GTTTTTGAGTAGGGGAATTT+TGG | - | Chr5:6440821-6440840 | None:intergenic | 35.0% |
AAAAACTCACGAAAGAGGGA+AGG | - | Chr5:6443485-6443504 | None:intergenic | 40.0% | |
CAGTTATCTCAAGGTCTAGT+AGG | + | Chr5:6442086-6442105 | MsG0580024569.01.T01:CDS | 40.0% | |
CATAATCCACCCATATGAAG+TGG | - | Chr5:6441698-6441717 | None:intergenic | 40.0% | |
CTGCAAAATCCACTGTTGAA+GGG | + | Chr5:6442215-6442234 | MsG0580024569.01.T01:CDS | 40.0% | |
CTTGCACGTTATCGCTTAAA+GGG | + | Chr5:6443954-6443973 | MsG0580024569.01.T01:three_prime_UTR | 40.0% | |
GAAGAGAATAAGGAAGGGAA+AGG | - | Chr5:6440745-6440764 | None:intergenic | 40.0% | |
GAGAAGGTAGGCTAAAATTC+AGG | + | Chr5:6442554-6442573 | MsG0580024569.01.T01:intron | 40.0% | |
GTAGAAAGGATGGATCATGT+TGG | + | Chr5:6442809-6442828 | MsG0580024569.01.T01:intron | 40.0% | |
TCAGCTGATCAGTTATCTCA+AGG | + | Chr5:6442077-6442096 | MsG0580024569.01.T01:CDS | 40.0% | |
TCCCAGTTTACCGTTTAATC+CGG | + | Chr5:6441980-6441999 | MsG0580024569.01.T01:CDS | 40.0% | |
TCTGCAAAATCCACTGTTGA+AGG | + | Chr5:6442214-6442233 | MsG0580024569.01.T01:CDS | 40.0% | |
TCTGCAGTATCCAGAGATTT+AGG | - | Chr5:6441600-6441619 | None:intergenic | 40.0% | |
TCTTTACCACTTCATATGGG+TGG | + | Chr5:6441689-6441708 | MsG0580024569.01.T01:intron | 40.0% | |
TGAATTTGATTCAACACCCC+AGG | - | Chr5:6441823-6441842 | None:intergenic | 40.0% | |
TGGAGGAAAATGAGAAGCTT+CGG | + | Chr5:6443769-6443788 | MsG0580024569.01.T01:CDS | 40.0% | |
TGGTAAGTAACCCATTAGCA+GGG | - | Chr5:6444037-6444056 | None:intergenic | 40.0% | |
TTCCAAGTCTATCAGTGTTG+AGG | - | Chr5:6443616-6443635 | None:intergenic | 40.0% | |
TTGCACGTTATCGCTTAAAG+GGG | + | Chr5:6443955-6443974 | MsG0580024569.01.T01:three_prime_UTR | 40.0% | |
TTGGTAAGTAACCCATTAGC+AGG | - | Chr5:6444038-6444057 | None:intergenic | 40.0% | |
! | AGAACTAGCTTCAAGTTTGC+TGG | - | Chr5:6443826-6443845 | None:intergenic | 40.0% |
! | CAAGTTATGAGTGCTACTAG+GGG | + | Chr5:6440974-6440993 | MsG0580024569.01.T01:CDS | 40.0% |
! | TGCTGAGACCATTTTCCATT+TGG | + | Chr5:6442473-6442492 | MsG0580024569.01.T01:intron | 40.0% |
!! | ATGCATTTTCTGGTGTTAGC+AGG | + | Chr5:6441005-6441024 | MsG0580024569.01.T01:CDS | 40.0% |
!!! | CTTGGTTTTTGGCCAAAACA+GGG | + | Chr5:6442903-6442922 | MsG0580024569.01.T01:intron | 40.0% |
!!! | TTGGTTTTTGGCCAAAACAG+GGG | + | Chr5:6442904-6442923 | MsG0580024569.01.T01:intron | 40.0% |
AAAGGATGGATCATGTTGGC+TGG | + | Chr5:6442813-6442832 | MsG0580024569.01.T01:intron | 45.0% | |
AAGGGAGATCTCACGGTTTA+GGG | - | Chr5:6443984-6444003 | None:intergenic | 45.0% | |
AATCCACTGTTGAAGGGAGA+AGG | + | Chr5:6442221-6442240 | MsG0580024569.01.T01:CDS | 45.0% | |
ACCCGGATTAAACGGTAAAC+TGG | - | Chr5:6441985-6442004 | None:intergenic | 45.0% | |
ATATGGCAGTCGAACTGAGA+AGG | + | Chr5:6442178-6442197 | MsG0580024569.01.T01:CDS | 45.0% | |
CCCAGTTTACCGTTTAATCC+GGG | + | Chr5:6441981-6442000 | MsG0580024569.01.T01:CDS | 45.0% | |
CCCGGATTAAACGGTAAACT+GGG | - | Chr5:6441984-6442003 | None:intergenic | 45.0% | |
GCTTGCACGTTATCGCTTAA+AGG | + | Chr5:6443953-6443972 | MsG0580024569.01.T01:three_prime_UTR | 45.0% | |
GGCCAAAAACCAAGCTCATT+GGG | - | Chr5:6442897-6442916 | None:intergenic | 45.0% | |
GGGTCTCAACCAATGAACAT+TGG | + | Chr5:6442107-6442126 | MsG0580024569.01.T01:CDS | 45.0% | |
GGTAAGTAACCCATTAGCAG+GGG | - | Chr5:6444036-6444055 | None:intergenic | 45.0% | |
GTCCTCAACACTGATAGACT+TGG | + | Chr5:6443611-6443630 | MsG0580024569.01.T01:intron | 45.0% | |
TAACAACAGACGATGCCTAC+AGG | - | Chr5:6443228-6443247 | None:intergenic | 45.0% | |
TAAGGGAGATCTCACGGTTT+AGG | - | Chr5:6443985-6444004 | None:intergenic | 45.0% | |
TACAAGTTGCCCCTGCTAAT+GGG | + | Chr5:6444024-6444043 | MsG0580024569.01.T01:three_prime_UTR | 45.0% | |
TAGTGTGGAGATGAGAAGGT+AGG | + | Chr5:6442542-6442561 | MsG0580024569.01.T01:intron | 45.0% | |
TCAAATGGCACAAAGCCCTT+TGG | - | Chr5:6442591-6442610 | None:intergenic | 45.0% | |
TCGACTGCCATATGTAGAGT+CGG | - | Chr5:6442171-6442190 | None:intergenic | 45.0% | |
TGGCCAAAAACCAAGCTCAT+TGG | - | Chr5:6442898-6442917 | None:intergenic | 45.0% | |
TTCCACAAAAACCTACCTCC+TGG | - | Chr5:6441403-6441422 | None:intergenic | 45.0% | |
! | AAGGATGGATCATGTTGGCT+GGG | + | Chr5:6442814-6442833 | MsG0580024569.01.T01:intron | 45.0% |
! | ACTTCAGCCGACTCTACATA+TGG | + | Chr5:6442161-6442180 | MsG0580024569.01.T01:CDS | 45.0% |
! | GATGCAACATTCCCCTGTTT+TGG | - | Chr5:6442918-6442937 | None:intergenic | 45.0% |
! | GGTGCAACTGATGCATTTTC+TGG | + | Chr5:6440995-6441014 | MsG0580024569.01.T01:CDS | 45.0% |
! | GTTGGATGTGGAGTTGGTTT+CGG | + | Chr5:6441161-6441180 | MsG0580024569.01.T01:CDS | 45.0% |
! | TGGGGTTTTCTTTAACACCC+AGG | - | Chr5:6442869-6442888 | None:intergenic | 45.0% |
! | TTCCAGGAGGTAGGTTTTTG+TGG | + | Chr5:6441398-6441417 | MsG0580024569.01.T01:intron | 45.0% |
! | TTTGGAATCGGTTGTGGAGT+TGG | + | Chr5:6440680-6440699 | MsG0580024569.01.T01:CDS | 45.0% |
!! | AGGGGAATTTTGGGGAGATT+TGG | - | Chr5:6440811-6440830 | None:intergenic | 45.0% |
!! | ATCGGTTGTGGAGTTGGTAT+CGG | + | Chr5:6440686-6440705 | MsG0580024569.01.T01:CDS | 45.0% |
!! | ATGAGAGCTTACTGATTCGC+TGG | - | Chr5:6442255-6442274 | None:intergenic | 45.0% |
!! | ATTGAAGTGGGTGTTGGATG+TGG | + | Chr5:6441149-6441168 | MsG0580024569.01.T01:CDS | 45.0% |
!! | CTAGCTTCAAGTTTGCTGGA+TGG | - | Chr5:6443822-6443841 | None:intergenic | 45.0% |
!! | CTCCCAATGAGCTTGGTTTT+TGG | + | Chr5:6442892-6442911 | MsG0580024569.01.T01:intron | 45.0% |
!! | GGGGAATTTTGGGGAGATTT+GGG | - | Chr5:6440810-6440829 | None:intergenic | 45.0% |
!! | GTCGGCTGAAGTGTCTTTTA+TGG | - | Chr5:6442153-6442172 | None:intergenic | 45.0% |
!! | GTGCCATTTGACCTGTATCA+CGG | + | Chr5:6442600-6442619 | MsG0580024569.01.T01:intron | 45.0% |
!! | TACTGGTATGGTGGGTAGAA+AGG | + | Chr5:6442795-6442814 | MsG0580024569.01.T01:intron | 45.0% |
!! | TGAGAGCTTACTGATTCGCT+GGG | - | Chr5:6442254-6442273 | None:intergenic | 45.0% |
!! | TGTTGGGGTTTTGGCGATAA+TGG | + | Chr5:6442722-6442741 | MsG0580024569.01.T01:intron | 45.0% |
!!! | ACTGGTTTTGGAATCGGTTG+TGG | + | Chr5:6440674-6440693 | MsG0580024569.01.T01:CDS | 45.0% |
!!! | GCTTGGTTTTTGGCCAAAAC+AGG | + | Chr5:6442902-6442921 | MsG0580024569.01.T01:intron | 45.0% |
AACTCACGAAAGAGGGAAGG+TGG | - | Chr5:6443482-6443501 | None:intergenic | 50.0% | |
AATGGCACAAAGCCCTTTGG+AGG | - | Chr5:6442588-6442607 | None:intergenic | 50.0% | |
ACCAAGCTCATTGGGAGAGA+TGG | - | Chr5:6442889-6442908 | None:intergenic | 50.0% | |
ACTCACGAAAGAGGGAAGGT+GGG | - | Chr5:6443481-6443500 | None:intergenic | 50.0% | |
AGGGAGATCTCACGGTTTAG+GGG | - | Chr5:6443983-6444002 | None:intergenic | 50.0% | |
CAAGCTCATTGGGAGAGATG+GGG | - | Chr5:6442887-6442906 | None:intergenic | 50.0% | |
CACCACAATAGCAGCCATTG+CGG | - | Chr5:6442771-6442790 | None:intergenic | 50.0% | |
CAGGCAAAGTAGCCTCCAAA+GGG | + | Chr5:6442573-6442592 | MsG0580024569.01.T01:intron | 50.0% | |
CATTAGCAGGGGCAACTTGT+AGG | - | Chr5:6444025-6444044 | None:intergenic | 50.0% | |
CCAAGCTCATTGGGAGAGAT+GGG | - | Chr5:6442888-6442907 | None:intergenic | 50.0% | |
CCAAGTTCCAACTCGTAGTG+TGG | + | Chr5:6442527-6442546 | MsG0580024569.01.T01:intron | 50.0% | |
CTACAAGTTGCCCCTGCTAA+TGG | + | Chr5:6444023-6444042 | MsG0580024569.01.T01:three_prime_UTR | 50.0% | |
CTCATCTCCACACTACGAGT+TGG | - | Chr5:6442537-6442556 | None:intergenic | 50.0% | |
CTCGTAGTGTGGAGATGAGA+AGG | + | Chr5:6442538-6442557 | MsG0580024569.01.T01:intron | 50.0% | |
GAGCCGTGATACAGGTCAAA+TGG | - | Chr5:6442606-6442625 | None:intergenic | 50.0% | |
GCTTCGGCAGATACTAGTGA+AGG | + | Chr5:6443785-6443804 | MsG0580024569.01.T01:CDS | 50.0% | |
GGCAATGCACCCGGATTAAA+CGG | - | Chr5:6441993-6442012 | None:intergenic | 50.0% | |
GTGGCACTTTGTAAGGATGC+TGG | - | Chr5:6442014-6442033 | None:intergenic | 50.0% | |
TCAGGCAAAGTAGCCTCCAA+AGG | + | Chr5:6442572-6442591 | MsG0580024569.01.T01:intron | 50.0% | |
TGCACATGTCCTCTTCCTGT+AGG | + | Chr5:6443210-6443229 | MsG0580024569.01.T01:intron | 50.0% | |
TTTCCTAGGAGCCGTGATAC+AGG | - | Chr5:6442614-6442633 | None:intergenic | 50.0% | |
! | CCACACTACGAGTTGGAACT+TGG | - | Chr5:6442530-6442549 | None:intergenic | 50.0% |
! | GCATCCTTACAAAGTGCCAC+AGG | + | Chr5:6442014-6442033 | MsG0580024569.01.T01:CDS | 50.0% |
! | GTTGGTTTCGGTCATGGTGT+TGG | + | Chr5:6441173-6441192 | MsG0580024569.01.T01:CDS | 50.0% |
! | TGTGGAGTTGGTTTCGGTCA+TGG | + | Chr5:6441167-6441186 | MsG0580024569.01.T01:CDS | 50.0% |
! | TTCGGTCATGGTGTTGGAGT+TGG | + | Chr5:6441179-6441198 | MsG0580024569.01.T01:CDS | 50.0% |
!! | ACAGGACTTGCTGTGAAACC+TGG | + | Chr5:6441802-6441821 | MsG0580024569.01.T01:intron | 50.0% |
!! | AGGACTTGCTGTGAAACCTG+GGG | + | Chr5:6441804-6441823 | MsG0580024569.01.T01:intron | 50.0% |
!! | CAGGACTTGCTGTGAAACCT+GGG | + | Chr5:6441803-6441822 | MsG0580024569.01.T01:intron | 50.0% |
!! | GGTATGGTGGGTAGAAAGGA+TGG | + | Chr5:6442799-6442818 | MsG0580024569.01.T01:intron | 50.0% |
!! | TGCTATTGTGGTGGTGCTAC+TGG | + | Chr5:6442778-6442797 | MsG0580024569.01.T01:intron | 50.0% |
!! | TGTGGAGTTGGTATCGGTGT+TGG | + | Chr5:6440692-6440711 | MsG0580024569.01.T01:CDS | 50.0% |
!! | TTGTGGTGGTGCTACTGGTA+TGG | + | Chr5:6442783-6442802 | MsG0580024569.01.T01:intron | 50.0% |
AAGGATGCTGGCAATGCACC+CGG | - | Chr5:6442002-6442021 | None:intergenic | 55.0% | |
ACAGCAATCGCAAGCCGCAA+TGG | + | Chr5:6442754-6442773 | MsG0580024569.01.T01:intron | 55.0% | |
AGCCGCAATGGCTGCTATTG+TGG | + | Chr5:6442766-6442785 | MsG0580024569.01.T01:intron | 55.0% | |
ATTTAGGCATGCCGCGGTTG+TGG | - | Chr5:6441584-6441603 | None:intergenic | 55.0% | |
CAGACGATGCCTACAGGAAG+AGG | - | Chr5:6443222-6443241 | None:intergenic | 55.0% | |
CCACTGTTGAAGGGAGAAGG+AGG | + | Chr5:6442224-6442243 | MsG0580024569.01.T01:CDS | 55.0% | |
CCAGAGATTTAGGCATGCCG+CGG | - | Chr5:6441590-6441609 | None:intergenic | 55.0% | |
CCCATCTCTCCCAATGAGCT+TGG | + | Chr5:6442885-6442904 | MsG0580024569.01.T01:intron | 55.0% | |
CCTCCTTCTCCCTTCAACAG+TGG | - | Chr5:6442227-6442246 | None:intergenic | 55.0% | |
CGCAATGGCTGCTATTGTGG+TGG | + | Chr5:6442769-6442788 | MsG0580024569.01.T01:intron | 55.0% | |
CTCACGAAAGAGGGAAGGTG+GGG | - | Chr5:6443480-6443499 | None:intergenic | 55.0% | |
CTGTTGAAGGGAGAAGGAGG+AGG | + | Chr5:6442227-6442246 | MsG0580024569.01.T01:CDS | 55.0% | |
TGACCTGTATCACGGCTCCT+AGG | + | Chr5:6442608-6442627 | MsG0580024569.01.T01:intron | 55.0% | |
TGCGCCTGTGGCACTTTGTA+AGG | - | Chr5:6442021-6442040 | None:intergenic | 55.0% | |
! | TTGTTAGGGTGCCACAACCG+CGG | + | Chr5:6441570-6441589 | MsG0580024569.01.T01:intron | 55.0% |
!! | GGTGGTGCTACTGGTATGGT+GGG | + | Chr5:6442787-6442806 | MsG0580024569.01.T01:intron | 55.0% |
!! | GTGGGTGTTGGATGTGGAGT+TGG | + | Chr5:6441155-6441174 | MsG0580024569.01.T01:CDS | 55.0% |
!! | TGGTGGTGCTACTGGTATGG+TGG | + | Chr5:6442786-6442805 | MsG0580024569.01.T01:intron | 55.0% |
CCGCGGCATGCCTAAATCTC+TGG | + | Chr5:6441587-6441606 | MsG0580024569.01.T01:intron | 60.0% | |
TCCAGAACTGACTGCGCCTG+TGG | - | Chr5:6442033-6442052 | None:intergenic | 60.0% | |
GCCACAGGCGCAGTCAGTTC+TGG | + | Chr5:6442029-6442048 | MsG0580024569.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 6440602 | 6444058 | 6440602 | ID=MsG0580024569.01;Name=MsG0580024569.01 |
Chr5 | mRNA | 6440602 | 6444058 | 6440602 | ID=MsG0580024569.01.T01;Parent=MsG0580024569.01;Name=MsG0580024569.01.T01;_AED=0.46;_eAED=0.56;_QI=0|0.75|0.8|1|1|1|5|141|356 |
Chr5 | exon | 6440602 | 6441042 | 6440602 | ID=MsG0580024569.01.T01:exon:1523;Parent=MsG0580024569.01.T01 |
Chr5 | exon | 6441125 | 6441200 | 6441125 | ID=MsG0580024569.01.T01:exon:1524;Parent=MsG0580024569.01.T01 |
Chr5 | exon | 6441806 | 6441855 | 6441806 | ID=MsG0580024569.01.T01:exon:1525;Parent=MsG0580024569.01.T01 |
Chr5 | exon | 6441942 | 6442262 | 6441942 | ID=MsG0580024569.01.T01:exon:1526;Parent=MsG0580024569.01.T01 |
Chr5 | exon | 6443735 | 6444058 | 6443735 | ID=MsG0580024569.01.T01:exon:1527;Parent=MsG0580024569.01.T01 |
Chr5 | CDS | 6440602 | 6441042 | 6440602 | ID=MsG0580024569.01.T01:cds;Parent=MsG0580024569.01.T01 |
Chr5 | CDS | 6441125 | 6441200 | 6441125 | ID=MsG0580024569.01.T01:cds;Parent=MsG0580024569.01.T01 |
Chr5 | CDS | 6441806 | 6441855 | 6441806 | ID=MsG0580024569.01.T01:cds;Parent=MsG0580024569.01.T01 |
Chr5 | CDS | 6441942 | 6442262 | 6441942 | ID=MsG0580024569.01.T01:cds;Parent=MsG0580024569.01.T01 |
Chr5 | CDS | 6443735 | 6443917 | 6443735 | ID=MsG0580024569.01.T01:cds;Parent=MsG0580024569.01.T01 |
Chr5 | three_prime_UTR | 6443918 | 6444058 | 6443918 | ID=MsG0580024569.01.T01:three_prime_utr;Parent=MsG0580024569.01.T01 |
Gene Sequence |
Protein sequence |