AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0863860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863860 MtrunA17_Chr5g0446131 97.481 516 13 0 1 516 1 516 0.0 1041
Msa0863860 MtrunA17_Chr2g0313751 79.651 516 105 0 1 516 30 545 0.0 868
Msa0863860 MtrunA17_Chr2g0313761 76.550 516 118 1 1 516 1 513 0.0 788
Msa0863860 MtrunA17_Chr2g0307301 69.515 515 157 0 2 516 6 520 0.0 777
Msa0863860 MtrunA17_Chr2g0307291 70.312 512 152 0 5 516 9 520 0.0 773
Msa0863860 MtrunA17_Chr2g0313821 71.037 511 147 1 7 516 8 518 0.0 770
Msa0863860 MtrunA17_Chr2g0313801 70.392 510 150 1 7 515 8 517 0.0 764
Msa0863860 MtrunA17_Chr2g0313781 68.893 524 150 2 5 515 6 529 0.0 751
Msa0863860 MtrunA17_Chr2g0313791 69.141 512 152 2 5 515 6 512 0.0 749
Msa0863860 MtrunA17_Chr2g0313811 70.986 517 137 2 12 515 13 529 0.0 744
Msa0863860 MtrunA17_Chr2g0313831 68.639 507 158 1 10 515 11 517 0.0 738
Msa0863860 MtrunA17_Chr2g0288661 66.667 513 171 0 4 516 8 520 0.0 722
Msa0863860 MtrunA17_Chr2g0313771 58.904 511 202 5 10 514 15 523 0.0 627
Msa0863860 MtrunA17_Chr8g0354511 56.783 516 211 5 7 514 13 524 0.0 593
Msa0863860 MtrunA17_Chr8g0354571 55.642 514 220 4 7 514 13 524 0.0 591
Msa0863860 MtrunA17_Chr8g0354531 54.971 513 224 4 7 514 135 645 0.0 583
Msa0863860 MtrunA17_Chr4g0014051 52.539 512 238 5 6 514 19 528 0.0 572
Msa0863860 MtrunA17_Chr4g0063221 40.600 500 279 6 26 515 29 520 2.22e-130 389
Msa0863860 MtrunA17_Chr7g0262111 39.279 499 284 7 21 514 21 505 5.94e-122 367
Msa0863860 MtrunA17_Chr1g0193811 36.853 502 306 5 20 515 21 517 6.86e-117 354
Msa0863860 MtrunA17_Chr6g0457421 34.682 519 315 9 6 515 5 508 7.77e-105 323
Msa0863860 MtrunA17_Chr1g0154731 33.665 502 316 5 17 514 15 503 2.96e-103 318
Msa0863860 MtrunA17_Chr7g0215181 33.915 516 317 8 10 516 11 511 7.70e-102 315
Msa0863860 MtrunA17_Chr1g0203141 30.645 496 326 7 27 514 30 515 5.85e-93 292
Msa0863860 MtrunA17_Chr8g0354561 46.201 329 149 5 7 329 95 401 6.34e-90 281
Msa0863860 MtrunA17_Chr1g0203151 31.452 496 318 9 27 514 30 511 4.53e-89 282
Msa0863860 MtrunA17_Chr7g0235261 32.465 499 312 7 27 507 12 503 2.72e-87 278
Msa0863860 MtrunA17_Chr3g0128461 31.041 509 334 7 16 513 21 523 3.11e-86 275
Msa0863860 MtrunA17_Chr8g0354541 67.416 178 58 0 337 514 1 178 3.34e-86 263
Msa0863860 MtrunA17_Chr4g0004601 30.874 515 332 8 10 507 17 524 2.10e-84 271
Msa0863860 MtrunA17_Chr6g0479681 29.961 514 319 10 27 514 31 529 2.38e-83 268
Msa0863860 MtrunA17_Chr8g0364081 31.250 512 333 9 22 515 32 542 3.46e-82 265
Msa0863860 MtrunA17_Chr6g0472221 29.644 533 329 11 4 514 18 526 2.71e-81 262
Msa0863860 MtrunA17_Chr8g0336361 28.801 559 338 9 6 514 10 558 5.28e-78 254
Msa0863860 MtrunA17_Chr2g0308651 35.323 402 247 8 126 515 16 416 4.37e-73 238
Msa0863860 MtrunA17_Chr8g0362731 34.031 382 242 5 132 512 32 404 1.32e-71 233
Msa0863860 MtrunA17_Chr2g0307311 64.912 114 40 0 40 153 9 122 6.69e-46 157
Msa0863860 MtrunA17_Chr2g0307321 69.892 93 28 0 164 256 1 93 1.09e-40 142
Msa0863860 MtrunA17_Chr5g0396521 26.770 452 265 14 90 487 103 542 6.76e-39 149
Msa0863860 MtrunA17_Chr1g0179811 26.807 429 263 14 90 489 108 514 1.30e-38 148
Msa0863860 MtrunA17_Chr6g0472161 27.778 360 244 8 22 374 22 372 5.23e-36 137
Msa0863860 MtrunA17_Chr6g0472171 35.507 138 89 0 377 514 21 158 3.63e-35 129
Msa0863860 MtrunA17_Chr1g0182861 36.957 138 87 0 377 514 26 163 6.65e-35 128
Msa0863860 MtrunA17_Chr0c19g0493771 25.513 439 273 14 90 500 218 630 2.32e-34 137
Msa0863860 MtrunA17_Chr3g0108651 43.269 104 59 0 399 502 1 104 3.74e-25 100
Msa0863860 MtrunA17_Chr7g0248991 25.392 319 206 10 136 438 49 351 2.30e-22 99.0
Msa0863860 MtrunA17_Chr3g0116741 25.348 359 244 11 142 489 140 485 2.97e-22 100
Msa0863860 MtrunA17_Chr5g0403351 22.062 417 293 11 90 487 68 471 4.36e-22 99.4
Msa0863860 MtrunA17_Chr4g0058231 21.445 429 302 12 83 487 52 469 5.09e-22 99.4
Msa0863860 MtrunA17_Chr3g0101711 22.751 378 271 11 142 510 127 492 5.12e-22 99.4
Msa0863860 MtrunA17_Chr3g0119681 24.658 438 275 17 98 498 80 499 1.55e-21 97.8
Msa0863860 MtrunA17_Chr5g0445461 22.967 418 294 16 90 493 71 474 1.62e-21 97.8
Msa0863860 MtrunA17_Chr1g0184421 25.250 400 249 14 132 509 118 489 3.07e-21 97.1
Msa0863860 MtrunA17_Chr1g0182871 25.397 252 163 6 136 378 27 262 4.71e-21 92.8
Msa0863860 MtrunA17_Chr6g0449331 22.697 445 312 14 97 513 74 514 5.72e-21 96.3
Msa0863860 MtrunA17_Chr1g0164321 23.210 461 291 16 97 513 105 546 6.06e-21 96.3
Msa0863860 MtrunA17_Chr3g0101691 25.070 359 243 11 142 487 128 473 7.15e-21 95.9
Msa0863860 MtrunA17_Chr3g0101631 23.342 377 259 13 123 487 106 464 7.26e-21 95.5
Msa0863860 MtrunA17_Chr5g0403331 21.910 356 258 8 142 487 127 472 8.04e-21 95.5
Msa0863860 MtrunA17_Chr1g0162811 24.163 418 285 13 87 487 66 468 1.02e-20 95.1
Msa0863860 MtrunA17_Chr5g0446161 23.596 356 256 9 142 493 131 474 1.44e-20 94.7
Msa0863860 MtrunA17_Chr8g0351391 23.585 424 264 17 101 488 85 484 2.11e-20 94.4
Msa0863860 MtrunA17_Chr4g0038271 21.973 446 308 13 98 513 124 559 2.56e-20 94.4
Msa0863860 MtrunA17_Chr3g0101701 24.156 385 257 14 142 510 128 493 3.74e-20 93.6
Msa0863860 MtrunA17_Chr7g0260831 22.811 434 283 16 99 504 81 490 6.06e-20 92.8
Msa0863860 MtrunA17_Chr5g0405001 25.083 303 206 9 199 487 186 481 6.80e-20 92.8
Msa0863860 MtrunA17_Chr3g0101731 21.667 360 262 10 137 487 121 469 1.46e-19 91.7
Msa0863860 MtrunA17_Chr4g0047641 21.801 422 298 13 90 492 81 489 1.49e-19 91.7
Msa0863860 MtrunA17_Chr4g0052851 24.279 416 272 17 85 483 59 448 1.72e-19 91.3
Msa0863860 MtrunA17_Chr7g0218611 25.503 298 207 7 197 486 177 467 2.02e-19 91.3
Msa0863860 MtrunA17_Chr4g0058191 23.841 302 213 7 197 490 169 461 2.93e-19 90.5
Msa0863860 MtrunA17_Chr5g0445381 23.908 435 289 20 75 487 85 499 3.86e-19 90.5
Msa0863860 MtrunA17_Chr1g0204271 22.986 422 270 16 101 488 79 479 4.29e-19 90.1
Msa0863860 MtrunA17_Chr5g0445421 22.482 427 284 14 75 487 128 521 5.89e-19 90.1
Msa0863860 MtrunA17_Chr1g0163391 22.601 469 297 19 87 513 57 501 6.98e-19 89.7
Msa0863860 MtrunA17_Chr3g0101571 25.974 308 206 9 191 487 171 467 7.02e-19 89.7
Msa0863860 MtrunA17_Chr5g0445441 22.779 439 301 17 75 493 95 515 1.46e-18 89.0
Msa0863860 MtrunA17_Chr4g0004481 22.782 417 274 14 124 514 98 492 1.49e-18 88.6
Msa0863860 MtrunA17_Chr4g0020041 21.667 420 295 15 87 487 66 470 1.50e-18 88.6
Msa0863860 MtrunA17_Chr8g0351401 23.990 396 248 15 125 487 107 482 1.52e-18 88.6
Msa0863860 MtrunA17_Chr8g0351311 23.434 431 257 19 101 488 85 485 1.72e-18 88.6
Msa0863860 MtrunA17_Chr6g0484811 22.778 360 262 11 142 492 126 478 1.80e-18 88.2
Msa0863860 MtrunA17_Chr7g0227281 22.222 459 313 17 82 513 52 493 1.86e-18 88.2
Msa0863860 MtrunA17_Chr5g0403321 22.438 361 253 11 142 487 126 474 2.99e-18 87.8
Msa0863860 MtrunA17_Chr4g0058281 22.590 363 248 12 142 487 135 481 3.00e-18 87.8
Msa0863860 MtrunA17_Chr4g0035921 21.988 332 243 6 171 487 151 481 3.39e-18 87.4
Msa0863860 MtrunA17_Chr4g0047631 22.328 421 294 14 90 492 80 485 3.49e-18 87.4
Msa0863860 MtrunA17_Chr5g0419451 22.864 398 271 14 104 483 105 484 3.77e-18 87.4
Msa0863860 MtrunA17_Chr4g0017411 23.971 413 277 16 85 483 56 445 5.70e-18 86.7
Msa0863860 MtrunA17_Chr7g0225531 28.862 246 149 7 252 487 255 484 5.72e-18 86.7
Msa0863860 MtrunA17_Chr3g0101601 23.097 381 262 13 123 490 106 468 5.77e-18 86.7
Msa0863860 MtrunA17_Chr1g0174441 26.433 314 205 10 191 487 193 497 6.90e-18 86.7
Msa0863860 MtrunA17_Chr8g0390881 24.104 307 216 9 191 487 173 472 7.05e-18 86.7
Msa0863860 MtrunA17_Chr6g0463801 24.765 319 220 10 183 493 165 471 7.87e-18 86.3
Msa0863860 MtrunA17_Chr3g0101621 22.632 380 262 14 123 490 103 462 8.82e-18 86.3
Msa0863860 MtrunA17_Chr3g0101721 21.629 356 258 9 142 487 127 471 9.27e-18 86.3
Msa0863860 MtrunA17_Chr4g0047691 22.066 426 293 14 83 487 76 483 1.05e-17 85.9
Msa0863860 MtrunA17_Chr6g0465511 23.971 413 262 17 104 487 80 469 1.09e-17 85.9
Msa0863860 MtrunA17_Chr6g0466331 23.971 413 262 17 104 487 80 469 1.15e-17 85.9
Msa0863860 MtrunA17_Chr4g0011981 24.915 293 203 8 204 487 180 464 1.20e-17 85.9
Msa0863860 MtrunA17_Chr5g0446151 23.810 357 255 10 142 493 131 475 1.42e-17 85.5
Msa0863860 MtrunA17_Chr7g0246221 22.222 459 301 16 88 516 63 495 1.64e-17 85.5
Msa0863860 MtrunA17_Chr1g0184461 23.235 439 280 17 98 509 81 489 1.79e-17 85.1
Msa0863860 MtrunA17_Chr8g0377341 23.500 400 278 11 98 483 108 493 1.93e-17 85.1
Msa0863860 MtrunA17_Chr4g0058201 23.377 308 219 7 188 487 162 460 2.19e-17 85.1
Msa0863860 MtrunA17_Chr6g0458561 22.248 427 286 15 90 487 88 497 2.61e-17 84.7
Msa0863860 MtrunA17_Chr8g0361471 23.971 413 262 17 104 487 80 469 2.81e-17 84.7
Msa0863860 MtrunA17_Chr4g0024771 21.412 425 296 17 84 487 61 468 3.33e-17 84.3
Msa0863860 MtrunA17_Chr6g0449341 22.472 445 313 14 97 513 122 562 3.45e-17 84.7
Msa0863860 MtrunA17_Chr5g0443401 22.782 417 266 12 82 483 67 442 3.89e-17 84.0
Msa0863860 MtrunA17_Chr5g0430031 23.229 353 252 10 145 487 129 472 3.90e-17 84.3
Msa0863860 MtrunA17_Chr5g0443731 24.317 366 228 15 137 487 115 446 4.13e-17 84.0
Msa0863860 MtrunA17_Chr3g0101671 20.613 359 259 9 142 487 128 473 5.50e-17 83.6
Msa0863860 MtrunA17_Chr4g0076161 21.127 355 259 8 142 487 129 471 5.65e-17 83.6
Msa0863860 MtrunA17_Chr5g0431501 23.414 457 281 18 77 487 37 470 5.76e-17 83.6
Msa0863860 MtrunA17_Chr5g0431461 23.414 457 281 18 77 487 37 470 5.76e-17 83.6
Msa0863860 MtrunA17_Chr4g0039391 22.249 418 296 12 87 486 63 469 6.19e-17 83.6
Msa0863860 MtrunA17_Chr8g0380501 22.271 458 315 14 82 513 48 490 6.35e-17 83.6
Msa0863860 MtrunA17_Chr5g0431591 23.390 295 210 10 200 487 1 286 6.68e-17 81.6
Msa0863860 MtrunA17_Chr1g0151221 23.608 449 281 15 87 488 67 500 6.81e-17 83.6
Msa0863860 MtrunA17_Chr5g0431671 21.528 432 313 15 70 487 50 469 8.51e-17 83.2
Msa0863860 MtrunA17_Chr5g0445531 21.516 409 298 13 90 487 71 467 9.08e-17 83.2
Msa0863860 MtrunA17_Chr5g0445451 22.573 412 291 16 90 487 71 468 9.11e-17 83.2
Msa0863860 MtrunA17_Chr3g0135841 24.236 458 272 18 87 488 70 508 1.01e-16 83.2
Msa0863860 MtrunA17_Chr7g0218601 25.000 304 201 9 197 487 178 467 1.33e-16 82.4
Msa0863860 MtrunA17_Chr6g0449381 20.674 445 311 14 97 513 74 504 1.41e-16 82.4
Msa0863860 MtrunA17_Chr1g0210091 23.697 422 279 15 69 464 79 483 1.78e-16 82.4
Msa0863860 MtrunA17_Chr6g0463791 23.099 355 250 9 142 487 127 467 1.93e-16 82.0
Msa0863860 MtrunA17_Chr7g0265611 24.399 291 206 9 204 488 204 486 1.94e-16 82.0
Msa0863860 MtrunA17_Chr1g0163351 22.294 462 320 16 82 513 52 504 2.38e-16 81.6
Msa0863860 MtrunA17_Chr5g0431641 23.810 294 209 9 200 487 184 468 2.43e-16 81.6
Msa0863860 MtrunA17_Chr3g0101581 25.868 317 210 12 184 487 166 470 2.50e-16 81.6
Msa0863860 MtrunA17_Chr5g0430071 23.129 294 216 6 200 487 36 325 3.11e-16 80.5
Msa0863860 MtrunA17_Chr4g0047661 21.583 417 298 15 90 487 79 485 3.35e-16 81.3
Msa0863860 MtrunA17_Chr4g0056951 22.300 426 266 15 75 464 60 456 3.48e-16 81.3
Msa0863860 MtrunA17_Chr4g0058211 27.473 182 129 3 311 490 9 189 3.71e-16 77.8
Msa0863860 MtrunA17_Chr5g0395331 25.581 301 198 12 199 487 186 472 3.81e-16 81.3
Msa0863860 MtrunA17_Chr5g0446101 23.232 297 215 6 200 493 1 287 4.21e-16 79.3
Msa0863860 MtrunA17_Chr8g0339331 22.118 425 292 14 90 487 72 484 4.29e-16 80.9
Msa0863860 MtrunA17_Chr1g0160861 25.781 256 173 8 237 487 63 306 4.62e-16 79.7
Msa0863860 MtrunA17_Chr7g0227291 22.658 459 311 16 82 513 52 493 4.72e-16 80.9
Msa0863860 MtrunA17_Chr3g0101661 22.527 364 245 13 142 487 128 472 4.91e-16 80.9
Msa0863860 MtrunA17_Chr1g0174461 25.559 313 207 10 191 487 173 475 4.91e-16 80.9
Msa0863860 MtrunA17_Chr8g0372251 23.588 301 214 9 199 487 177 473 6.32e-16 80.5
Msa0863860 MtrunA17_Chr5g0395321 22.249 418 286 16 87 487 70 465 6.70e-16 80.5
Msa0863860 MtrunA17_Chr1g0198191 23.709 426 298 16 82 489 71 487 7.16e-16 80.5
Msa0863860 MtrunA17_Chr5g0431511 23.184 358 251 10 143 487 124 470 8.29e-16 80.1
Msa0863860 MtrunA17_Chr1g0205361 25.417 240 163 7 252 487 238 465 9.53e-16 79.7
Msa0863860 MtrunA17_Chr5g0430091 24.916 297 207 8 200 487 183 472 9.53e-16 79.7
Msa0863860 MtrunA17_Chr4g0052861 21.154 416 285 13 90 483 63 457 1.16e-15 79.7
Msa0863860 MtrunA17_Chr3g0116681 24.415 299 208 10 201 490 185 474 1.52e-15 79.3
Msa0863860 MtrunA17_Chr8g0356001 22.129 357 251 9 144 487 132 474 1.63e-15 79.3
Msa0863860 MtrunA17_Chr8g0390871 26.857 175 126 2 315 487 20 194 1.86e-15 75.9
Msa0863860 MtrunA17_Chr8g0380471 26.984 252 162 6 240 487 217 450 2.97e-15 78.2
Msa0863860 MtrunA17_Chr5g0403451 24.715 263 153 8 283 513 29 278 3.36e-15 76.3
Msa0863860 MtrunA17_Chr2g0293421 23.367 398 258 14 98 483 92 454 3.78e-15 77.8
Msa0863860 MtrunA17_Chr5g0430081 22.559 297 220 6 197 487 178 470 4.10e-15 77.8
Msa0863860 MtrunA17_Chr3g0101811 22.546 377 252 14 137 487 122 484 4.70e-15 77.8
Msa0863860 MtrunA17_Chr2g0280261 26.861 309 210 9 191 493 170 468 5.20e-15 77.4
Msa0863860 MtrunA17_Chr1g0205371 23.383 402 263 11 87 464 63 443 6.43e-15 77.4
Msa0863860 MtrunA17_Chr8g0351441 23.636 385 251 15 132 488 113 482 7.75e-15 77.0
Msa0863860 MtrunA17_Chr3g0101801 21.667 420 296 14 87 487 71 476 1.15e-14 76.6
Msa0863860 MtrunA17_Chr4g0011901 21.986 423 290 12 88 487 59 464 1.72e-14 75.9
Msa0863860 MtrunA17_Chr1g0197891 25.203 246 171 6 245 487 228 463 1.76e-14 75.9
Msa0863860 MtrunA17_Chr1g0197871 24.901 253 176 8 239 487 221 463 1.77e-14 75.9
Msa0863860 MtrunA17_Chr1g0163451 26.000 200 137 4 323 513 326 523 1.82e-14 75.9
Msa0863860 MtrunA17_Chr6g0463621 25.389 193 134 5 323 509 2 190 1.83e-14 72.4
Msa0863860 MtrunA17_Chr5g0400421 23.940 401 254 15 98 483 92 456 1.86e-14 75.9
Msa0863860 MtrunA17_Chr8g0362701 24.919 309 207 10 191 483 172 471 2.06e-14 75.9
Msa0863860 MtrunA17_Chr8g0334891 22.159 352 232 10 150 487 133 456 2.15e-14 75.5
Msa0863860 MtrunA17_Chr1g0197881 25.203 246 171 6 245 487 227 462 2.71e-14 75.1
Msa0863860 MtrunA17_Chr8g0381541 25.847 236 153 7 259 486 241 462 3.24e-14 75.1
Msa0863860 MtrunA17_Chr8g0362481 24.194 310 208 10 191 483 103 402 3.31e-14 74.7
Msa0863860 MtrunA17_Chr1g0197851 25.610 246 170 7 245 487 228 463 3.41e-14 75.1
Msa0863860 MtrunA17_Chr5g0430101 21.452 303 226 7 191 487 173 469 5.07e-14 74.3
Msa0863860 MtrunA17_Chr1g0174451 23.718 312 214 8 191 487 174 476 5.61e-14 74.3
Msa0863860 MtrunA17_Chr8g0387001 22.323 439 288 14 104 509 82 500 5.71e-14 74.3
Msa0863860 MtrunA17_Chr1g0164211 25.203 246 167 7 247 487 229 462 6.30e-14 74.3
Msa0863860 MtrunA17_Chr2g0280011 30.208 192 121 7 318 499 5 193 6.58e-14 70.9
Msa0863860 MtrunA17_Chr8g0381571 26.180 233 146 8 259 483 241 455 7.02e-14 73.9
Msa0863860 MtrunA17_Chr5g0430131 23.469 294 214 7 200 487 183 471 7.06e-14 73.9
Msa0863860 MtrunA17_Chr1g0200951 21.667 300 214 8 196 485 209 497 7.79e-14 73.9
Msa0863860 MtrunA17_Chr1g0156101 22.506 391 261 15 145 508 125 500 8.74e-14 73.9
Msa0863860 MtrunA17_Chr4g0057001 21.498 414 283 14 75 464 66 461 9.36e-14 73.6
Msa0863860 MtrunA17_Chr1g0160851 27.374 179 126 4 312 487 288 465 1.09e-13 73.6
Msa0863860 MtrunA17_Chr3g0101651 21.260 381 273 11 142 510 128 493 1.10e-13 73.6
Msa0863860 MtrunA17_Chr8g0334941 22.561 328 212 10 174 487 2 301 1.40e-13 72.0
Msa0863860 MtrunA17_Chr1g0162801 24.769 432 268 17 87 487 66 471 1.73e-13 72.8
Msa0863860 MtrunA17_Chr7g0246151 22.014 427 287 15 89 488 64 471 2.07e-13 72.4
Msa0863860 MtrunA17_Chr3g0101761 23.292 322 222 10 178 487 161 469 2.50e-13 72.4
Msa0863860 MtrunA17_Chr3g0101611 22.482 427 278 17 90 487 69 471 2.65e-13 72.4
Msa0863860 MtrunA17_Chr1g0163491 20.536 448 312 14 97 513 86 520 2.88e-13 72.0
Msa0863860 MtrunA17_Chr7g0255531 23.077 312 211 9 200 498 178 473 3.27e-13 72.0
Msa0863860 MtrunA17_Chr1g0200961 24.161 447 305 17 87 514 56 487 3.61e-13 71.6
Msa0863860 MtrunA17_Chr4g0011961 22.408 299 216 11 197 487 173 463 4.24e-13 71.6
Msa0863860 MtrunA17_Chr6g0484841 21.378 421 306 11 83 487 61 472 4.42e-13 71.6
Msa0863860 MtrunA17_Chr1g0163461 25.500 200 138 4 323 513 321 518 6.22e-13 71.2
Msa0863860 MtrunA17_Chr1g0167321 22.851 442 305 14 87 509 63 487 6.90e-13 70.9
Msa0863860 MtrunA17_Chr6g0466941 21.410 383 265 14 127 483 111 483 7.09e-13 70.9
Msa0863860 MtrunA17_Chr3g0101831 21.488 363 264 11 135 487 119 470 8.08e-13 70.9
Msa0863860 MtrunA17_Chr7g0214931 24.571 350 219 16 97 416 96 430 8.16e-13 70.5
Msa0863860 MtrunA17_Chr5g0400411 23.291 395 257 12 102 483 94 455 1.53e-12 69.7
Msa0863860 MtrunA17_Chr1g0163421 24.000 200 141 4 323 513 342 539 1.73e-12 69.7
Msa0863860 MtrunA17_Chr3g0101821 22.006 309 219 8 191 487 171 469 1.80e-12 69.7
Msa0863860 MtrunA17_Chr2g0334021 26.667 270 175 8 223 487 219 470 1.84e-12 69.7
Msa0863860 MtrunA17_Chr8g0387101 28.495 186 122 5 312 487 292 476 1.94e-12 69.3
Msa0863860 MtrunA17_Chr1g0153371 22.595 447 294 12 65 487 25 443 2.09e-12 69.3
Msa0863860 MtrunA17_Chr2g0280081 21.609 435 311 13 81 494 55 480 2.19e-12 70.1
Msa0863860 MtrunA17_Chr2g0280081 27.027 185 125 4 312 487 792 975 2.54e-12 69.7
Msa0863860 MtrunA17_Chr8g0364651 25.843 267 162 9 245 488 216 469 2.26e-12 69.3
Msa0863860 MtrunA17_Chr8g0344181 23.294 425 286 15 87 487 66 474 2.42e-12 69.3
Msa0863860 MtrunA17_Chr8g0339311 27.322 183 126 5 307 483 307 488 2.67e-12 68.9
Msa0863860 MtrunA17_Chr4g0011921 22.115 312 224 9 186 487 162 464 2.78e-12 68.9
Msa0863860 MtrunA17_Chr2g0314731 26.316 228 152 9 265 487 249 465 3.40e-12 68.6
Msa0863860 MtrunA17_Chr3g0101751 22.977 309 216 8 191 487 178 476 3.40e-12 68.9
Msa0863860 MtrunA17_Chr6g0451691 27.660 235 154 8 256 483 268 493 3.64e-12 68.6
Msa0863860 MtrunA17_Chr3g0101741 20.345 290 213 6 204 487 114 391 4.41e-12 68.2
Msa0863860 MtrunA17_Chr2g0286091 24.803 254 156 7 231 469 221 454 4.89e-12 68.2
Msa0863860 MtrunA17_Chr2g0280071 28.804 184 121 5 313 487 325 507 9.26e-12 67.8
Msa0863860 MtrunA17_Chr5g0419691 22.259 301 215 8 197 487 173 464 1.02e-11 67.0
Msa0863860 MtrunA17_Chr3g0101591 27.711 166 117 3 324 487 42 206 1.02e-11 65.1
Msa0863860 MtrunA17_Chr8g0357421 20.807 322 239 7 174 487 156 469 1.12e-11 67.0
Msa0863860 MtrunA17_Chr6g0451751 21.203 316 223 9 185 483 183 489 1.98e-11 66.2
Msa0863860 MtrunA17_Chr6g0466901 22.165 388 263 16 127 488 111 485 2.34e-11 66.2
Msa0863860 MtrunA17_Chr2g0280061 29.167 192 123 7 318 499 5 193 2.40e-11 63.5
Msa0863860 MtrunA17_Chr4g0008101 22.844 429 285 16 90 483 72 489 2.67e-11 65.9
Msa0863860 MtrunA17_Chr2g0280121 21.294 371 271 9 138 494 123 486 3.20e-11 65.9
Msa0863860 MtrunA17_Chr4g0011871 21.598 463 305 17 65 487 21 465 3.21e-11 65.5
Msa0863860 MtrunA17_Chr8g0344151 23.948 309 204 11 197 487 177 472 3.29e-11 65.5
Msa0863860 MtrunA17_Chr7g0254641 20.984 305 216 10 196 484 184 479 4.51e-11 65.1
Msa0863860 MtrunA17_Chr1g0163401 20.000 455 313 16 97 513 70 511 5.77e-11 64.7
Msa0863860 MtrunA17_Chr1g0183611 25.134 187 129 4 324 501 228 412 6.91e-11 64.3
Msa0863860 MtrunA17_Chr5g0429651 22.556 399 260 15 123 493 108 485 8.10e-11 64.3
Msa0863860 MtrunA17_Chr3g0094231 21.000 300 218 11 196 487 182 470 8.18e-11 64.3
Msa0863860 MtrunA17_Chr6g0469321 37.662 77 44 2 309 384 14 87 8.90e-11 60.8
Msa0863860 MtrunA17_Chr1g0174431 24.157 178 120 4 321 487 1 174 9.62e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863860 AT3G14690.1 54.054 518 228 5 1 514 1 512 0.0 601
Msa0863860 AT3G14690.2 54.054 518 228 5 1 514 36 547 0.0 601
Msa0863860 AT3G14610.1 56.600 500 208 5 18 514 19 512 0.0 592
Msa0863860 AT3G14660.1 55.645 496 212 4 21 514 23 512 0.0 584
Msa0863860 AT3G14680.1 55.444 496 213 4 21 514 23 512 0.0 582
Msa0863860 AT3G14650.1 55.242 496 214 4 21 514 23 512 0.0 582
Msa0863860 AT3G14640.1 55.221 498 213 5 21 514 23 514 0.0 579
Msa0863860 AT3G14640.2 55.221 498 213 5 21 514 45 536 0.0 578
Msa0863860 AT3G14620.1 55.689 501 209 5 18 514 24 515 0.0 570
Msa0863860 AT3G14630.2 53.620 511 225 6 10 514 59 563 0.0 566
Msa0863860 AT3G14630.1 53.620 511 225 6 10 514 4 508 0.0 564
Msa0863860 AT3G14660.2 56.818 352 145 3 164 514 21 366 3.74e-147 426
Msa0863860 AT2G26710.1 40.762 525 286 7 2 514 4 515 1.26e-144 426
Msa0863860 AT3G14660.3 51.541 357 165 4 21 375 23 373 1.39e-129 383
Msa0863860 AT1G75130.1 37.223 497 292 7 26 516 23 505 1.02e-113 346
Msa0863860 AT2G46960.2 37.255 510 293 11 19 515 23 518 2.64e-112 343
Msa0863860 AT4G27710.1 36.329 523 318 6 1 514 1 517 4.16e-112 342
Msa0863860 AT2G46950.1 36.779 503 301 8 19 515 80 571 3.68e-110 339
Msa0863860 AT5G38450.1 34.757 515 324 7 6 514 8 516 4.37e-94 296
Msa0863860 AT2G46960.1 38.293 410 231 8 117 515 4 402 8.17e-92 286
Msa0863860 AT5G52400.1 30.989 526 333 11 3 514 10 519 3.84e-91 288
Msa0863860 AT5G24910.1 32.836 536 316 11 6 513 13 532 1.44e-89 285
Msa0863860 AT1G67110.1 33.204 515 325 7 7 515 10 511 1.82e-88 281
Msa0863860 AT5G24900.1 31.643 493 315 7 32 509 37 522 1.54e-86 276
Msa0863860 AT5G24900.2 34.896 384 240 4 132 509 26 405 1.92e-77 249
Msa0863860 AT1G17060.1 40.357 280 157 3 11 284 15 290 5.85e-72 232
Msa0863860 AT2G46950.2 34.807 362 219 8 19 374 80 430 3.53e-62 210
Msa0863860 AT4G27710.2 33.613 357 220 6 6 355 11 357 2.63e-59 201
Msa0863860 AT5G38450.2 30.548 383 257 5 6 382 8 387 1.25e-45 164
Msa0863860 AT5G24910.2 27.384 409 254 10 6 387 13 405 1.43e-40 151
Msa0863860 AT1G67110.2 30.481 374 244 6 7 374 10 373 1.50e-40 150
Msa0863860 AT3G53130.1 26.526 426 268 12 90 489 108 514 8.17e-38 146
Msa0863860 AT1G31800.1 26.047 430 265 13 90 490 139 544 1.17e-35 140
Msa0863860 AT4G15110.1 25.446 448 277 15 90 487 110 550 2.26e-33 134
Msa0863860 AT3G26125.1 24.619 459 299 14 96 515 85 535 4.49e-29 121
Msa0863860 AT1G13140.1 23.146 445 305 13 96 511 85 521 5.62e-26 111
Msa0863860 AT3G48310.1 22.276 413 296 9 90 491 63 461 2.03e-25 109
Msa0863860 AT1G13150.1 24.336 452 301 16 96 515 78 520 4.93e-25 108
Msa0863860 AT2G30770.1 27.759 299 194 8 199 487 178 464 1.75e-24 107
Msa0863860 AT3G48300.1 23.040 421 294 13 78 486 51 453 3.02e-24 106
Msa0863860 AT3G48300.2 23.040 421 294 13 78 486 53 455 3.06e-24 106
Msa0863860 AT1G24540.1 23.251 443 308 14 96 512 82 518 4.48e-24 105
Msa0863860 AT1G57750.1 26.067 445 279 15 97 513 73 495 5.27e-24 105
Msa0863860 AT1G13140.2 22.603 438 290 12 96 511 85 495 2.86e-23 103
Msa0863860 AT3G48270.1 23.077 416 283 12 90 488 62 457 5.66e-23 102
Msa0863860 AT3G48280.1 26.646 319 214 9 197 508 171 476 1.15e-22 101
Msa0863860 AT1G13080.1 23.546 361 250 12 142 487 120 469 2.68e-22 100
Msa0863860 AT5G23190.1 22.991 448 299 14 97 511 103 537 1.12e-21 99.0
Msa0863860 AT3G48290.1 24.029 412 282 12 90 487 64 458 1.86e-21 97.8
Msa0863860 AT1G13080.2 23.794 311 214 10 191 487 50 351 2.12e-21 96.7
Msa0863860 AT1G11610.1 24.823 423 277 16 90 490 64 467 3.13e-21 97.1
Msa0863860 AT1G11610.2 24.824 427 272 16 90 490 64 467 3.74e-21 97.1
Msa0863860 AT3G26160.1 22.248 427 295 13 91 493 62 475 5.78e-20 93.2
Msa0863860 AT2G30750.1 28.470 281 179 9 199 469 178 446 8.87e-20 92.8
Msa0863860 AT3G26230.1 23.248 314 215 10 191 487 163 467 1.02e-19 92.4
Msa0863860 AT2G45510.1 22.249 418 281 12 101 488 78 481 1.38e-19 92.4
Msa0863860 AT2G21910.1 24.215 446 297 16 97 513 72 505 1.42e-19 92.0
Msa0863860 AT3G26150.1 22.558 430 290 15 91 493 62 475 1.73e-19 92.0
Msa0863860 AT5G52320.1 23.516 455 285 17 97 514 74 502 2.08e-19 91.7
Msa0863860 AT2G44890.1 21.687 415 287 11 101 488 78 481 2.17e-19 91.7
Msa0863860 AT5G63450.1 26.027 438 273 19 98 509 79 491 3.33e-19 90.9
Msa0863860 AT5G63450.2 26.027 438 273 19 98 509 137 549 4.09e-19 90.9
Msa0863860 AT5G52320.2 23.714 447 278 17 97 506 74 494 7.35e-19 90.1
Msa0863860 AT5G24950.1 22.760 413 293 13 90 487 63 464 1.03e-18 89.4
Msa0863860 AT3G48320.1 23.295 352 249 7 142 487 121 457 2.19e-18 88.6
Msa0863860 AT3G48290.2 23.434 431 287 14 90 487 64 484 3.04e-18 88.2
Msa0863860 AT2G26170.1 23.414 457 289 17 87 506 73 505 3.60e-18 87.8
Msa0863860 AT5G08250.1 21.918 438 293 15 97 501 42 463 4.66e-18 87.4
Msa0863860 AT2G44890.2 21.308 413 273 11 101 488 78 463 5.20e-18 87.4
Msa0863860 AT1G69500.1 23.864 440 265 17 106 489 73 498 5.76e-18 87.4
Msa0863860 AT5G04330.1 24.251 334 229 9 171 487 146 472 7.30e-18 87.0
Msa0863860 AT5G08250.2 21.918 438 293 15 97 501 104 525 8.72e-18 86.7
Msa0863860 AT3G10560.1 24.356 427 278 18 82 483 72 478 9.27e-18 86.7
Msa0863860 AT5G09970.1 22.683 410 279 14 98 485 111 504 9.58e-18 86.7
Msa0863860 AT3G26830.1 20.471 425 301 16 87 488 56 466 1.33e-17 85.9
Msa0863860 AT3G26210.1 21.853 421 296 15 88 487 60 468 1.34e-17 85.9
Msa0863860 AT2G23180.1 22.707 458 291 17 98 513 75 511 3.43e-17 84.7
Msa0863860 AT2G26170.2 23.371 445 280 17 99 506 2 422 3.65e-17 84.3
Msa0863860 AT1G13090.2 22.928 362 250 12 142 487 117 465 3.75e-17 84.7
Msa0863860 AT4G36220.1 23.373 338 230 10 171 487 154 483 5.00e-17 84.3
Msa0863860 AT3G48520.1 23.982 442 277 19 98 509 76 488 7.02e-17 84.0
Msa0863860 AT1G13100.1 22.010 418 298 14 90 487 56 465 7.59e-17 83.6
Msa0863860 AT5G02900.1 30.049 203 129 6 321 513 279 478 8.13e-17 83.6
Msa0863860 AT4G31500.1 23.121 346 239 10 156 487 134 466 9.45e-17 83.6
Msa0863860 AT4G37400.1 23.389 419 282 14 88 486 60 459 1.76e-16 82.4
Msa0863860 AT4G13310.1 22.803 421 284 14 90 487 63 465 2.04e-16 82.4
Msa0863860 AT4G32170.1 29.208 202 129 5 321 513 306 502 2.15e-16 82.4
Msa0863860 AT5G24960.1 24.172 302 204 9 203 492 182 470 4.11e-16 81.3
Msa0863860 AT4G13290.1 22.434 419 280 12 90 487 64 458 4.28e-16 81.3
Msa0863860 AT3G26310.1 25.168 298 204 9 200 487 176 464 5.38e-16 80.9
Msa0863860 AT4G39510.1 28.141 199 135 4 321 513 308 504 5.66e-16 80.9
Msa0863860 AT5G44620.1 22.304 408 289 15 75 464 62 459 6.85e-16 80.9
Msa0863860 AT3G10570.1 26.316 228 156 8 268 489 263 484 7.30e-16 80.9
Msa0863860 AT2G27690.1 23.000 400 273 11 104 483 76 460 7.62e-16 80.5
Msa0863860 AT3G26270.1 21.028 428 292 15 88 487 61 470 8.64e-16 80.5
Msa0863860 AT2G42850.1 23.210 461 297 15 52 503 56 468 9.04e-16 80.1
Msa0863860 AT3G26300.1 22.512 422 289 14 88 487 60 465 9.08e-16 80.5
Msa0863860 AT3G26180.1 19.725 436 311 13 83 493 54 475 9.90e-16 80.1
Msa0863860 AT3G25180.1 22.673 419 288 13 90 486 72 476 1.12e-15 80.1
Msa0863860 AT3G26170.1 19.266 436 313 13 83 493 54 475 1.19e-15 80.1
Msa0863860 AT5G04630.1 23.462 439 299 21 82 497 64 488 1.23e-15 80.1
Msa0863860 AT4G39500.1 28.788 198 134 5 321 513 270 465 1.77e-15 79.3
Msa0863860 AT4G39500.2 28.788 198 134 5 321 513 320 515 3.32e-15 78.6
Msa0863860 AT4G39490.1 22.247 454 303 17 98 513 74 515 3.72e-15 78.6
Msa0863860 AT5G04660.1 22.494 449 316 16 82 512 67 501 6.00e-15 77.8
Msa0863860 AT1G65340.1 26.500 200 135 5 321 514 310 503 6.28e-15 77.8
Msa0863860 AT2G24180.1 21.752 331 239 8 191 510 173 494 6.74e-15 77.8
Msa0863860 AT1G13110.1 20.670 358 259 11 142 484 121 468 8.00e-15 77.4
Msa0863860 AT5G25140.1 22.169 415 293 13 90 487 60 461 8.62e-15 77.4
Msa0863860 AT1G66540.1 23.739 337 220 12 167 486 29 345 1.12e-14 76.3
Msa0863860 AT1G34540.1 22.464 414 281 15 99 487 72 470 1.14e-14 77.0
Msa0863860 AT5G10610.1 22.566 452 294 20 83 509 57 477 1.57e-14 76.6
Msa0863860 AT3G20950.1 25.806 310 199 10 191 483 184 479 2.20e-14 76.3
Msa0863860 AT1G01280.1 21.002 419 297 13 90 483 63 472 2.83e-14 75.9
Msa0863860 AT3G26190.1 20.759 448 315 14 90 514 59 489 2.90e-14 75.5
Msa0863860 AT3G61040.1 26.190 210 143 5 280 486 263 463 3.64e-14 75.5
Msa0863860 AT1G01600.1 28.652 178 111 4 321 482 305 482 3.89e-14 75.5
Msa0863860 AT5G36220.1 21.644 365 247 12 137 486 124 464 6.37e-14 74.7
Msa0863860 AT1G66540.2 23.000 300 203 9 197 486 5 286 9.69e-14 72.8
Msa0863860 AT4G20240.1 23.280 378 238 12 90 440 64 416 1.28e-13 73.6
Msa0863860 AT4G37410.1 21.531 418 283 15 89 483 61 456 1.47e-13 73.6
Msa0863860 AT1G47620.1 26.000 200 139 4 321 513 317 514 1.90e-13 73.2
Msa0863860 AT4G19230.1 21.429 462 290 16 81 513 44 461 2.13e-13 72.8
Msa0863860 AT4G15360.1 22.222 306 222 7 191 487 178 476 4.11e-13 72.0
Msa0863860 AT1G63710.1 25.854 205 140 2 321 513 302 506 4.22e-13 72.0
Msa0863860 AT4G37370.1 22.888 367 240 14 137 486 117 457 4.71e-13 72.0
Msa0863860 AT1G55940.1 24.590 244 165 6 245 482 228 458 5.36e-13 71.6
Msa0863860 AT4G19230.2 22.222 414 267 15 82 484 60 429 5.68e-13 71.6
Msa0863860 AT1G55940.2 24.590 244 165 6 245 482 228 458 6.18e-13 71.6
Msa0863860 AT1G64940.1 26.374 182 129 4 309 486 298 478 7.76e-13 71.2
Msa0863860 AT5G36220.2 21.498 307 210 9 191 486 32 318 9.18e-13 70.1
Msa0863860 AT5G25120.1 23.684 304 205 7 197 487 172 461 1.08e-12 70.9
Msa0863860 AT5G06900.1 21.226 424 296 14 85 487 59 465 1.27e-12 70.5
Msa0863860 AT3G20935.1 23.569 297 190 8 216 483 13 301 1.51e-12 69.3
Msa0863860 AT4G37320.1 24.176 364 239 14 137 486 118 458 3.56e-12 68.9
Msa0863860 AT2G25160.1 24.092 303 203 9 178 462 165 458 4.61e-12 68.9
Msa0863860 AT3G26220.1 22.222 315 219 8 191 488 166 471 4.69e-12 68.6
Msa0863860 AT1G64930.1 24.457 184 132 4 309 486 296 478 5.37e-12 68.6
Msa0863860 AT2G45560.1 22.868 258 178 7 239 487 230 475 6.65e-12 68.2
Msa0863860 AT4G22690.1 23.881 402 266 16 90 468 116 500 8.51e-12 68.2
Msa0863860 AT2G45580.2 26.347 167 121 2 322 487 157 322 8.64e-12 67.0
Msa0863860 AT3G26200.1 20.950 358 263 11 142 487 117 466 9.38e-12 67.8
Msa0863860 AT1G28430.1 22.000 300 213 9 200 487 187 477 9.62e-12 67.8
Msa0863860 AT1G12740.4 21.780 427 289 13 76 486 53 450 1.02e-11 67.4
Msa0863860 AT4G37310.1 21.247 433 301 15 78 486 54 470 1.17e-11 67.4
Msa0863860 AT3G20140.1 21.753 308 218 9 191 487 180 475 1.18e-11 67.4
Msa0863860 AT2G45580.1 26.347 167 121 2 322 487 311 476 1.27e-11 67.4
Msa0863860 AT4G15396.1 24.017 229 145 9 270 484 227 440 1.50e-11 67.0
Msa0863860 AT4G15310.1 26.601 203 133 6 287 484 251 442 1.52e-11 67.0
Msa0863860 AT4G15396.3 24.017 229 145 9 270 484 227 440 1.72e-11 66.6
Msa0863860 AT5G57220.1 21.412 425 274 17 90 486 61 453 2.53e-11 66.2
Msa0863860 AT2G28860.1 22.802 364 231 14 142 486 127 459 3.22e-11 66.2
Msa0863860 AT5G42590.1 21.934 424 283 13 90 487 63 464 3.36e-11 65.9
Msa0863860 AT4G22710.1 23.737 396 262 16 96 468 91 469 3.62e-11 65.9
Msa0863860 AT4G15393.2 25.561 223 143 7 270 482 227 436 4.35e-11 65.5
Msa0863860 AT5G67310.1 20.000 415 287 15 94 486 78 469 4.96e-11 65.5
Msa0863860 AT3G61880.1 23.320 253 151 8 250 490 280 501 7.45e-11 65.1
Msa0863860 AT3G61880.2 23.320 253 151 8 250 490 280 501 8.69e-11 64.7
Msa0863860 AT4G12310.1 22.484 467 314 20 75 516 60 503 9.06e-11 64.7
Msa0863860 AT3G20940.1 23.473 311 206 9 191 483 180 476 9.11e-11 64.7

Find 115 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGCCTTCCCTTCAGAATT+TGG 0.171134 5_4:-63934860 Msa0863860:CDS
TCCATTTCTCTGTTTGTAAT+TGG 0.176071 5_4:+63937235 None:intergenic
AATAGGAGGATTAATGAAAT+TGG 0.205642 5_4:-63934557 Msa0863860:CDS
GCAATGATTTAATTAGAAAA+TGG 0.211121 5_4:-63934924 Msa0863860:CDS
AACAGCTTCTCTAGCTTCTT+TGG 0.214282 5_4:+63937130 None:intergenic
ATTCCTCCAGAAAATCTTTC+AGG 0.221298 5_4:+63933269 None:intergenic
TGCACCATGATTGTGAATTA+TGG 0.225322 5_4:-63933316 Msa0863860:CDS
CTACTTCAACTTTACTTGTT+TGG 0.238479 5_4:-63934325 Msa0863860:CDS
GTTTCGCGAAAGCTCAATTA+TGG 0.257252 5_4:+63933412 None:intergenic
TCATATTATTCTGCGTAAAT+TGG 0.261176 5_4:-63933051 Msa0863860:CDS
TCATGGTGCAACAATATAAT+TGG 0.263625 5_4:+63933329 None:intergenic
TTATTTAGCCCATCAAAATT+TGG 0.263674 5_4:+63934221 None:intergenic
TGCAAGTTGTTCTACTTTGC+AGG 0.275508 5_4:-63934356 Msa0863860:CDS
TTGTGACGCTTGGTTTGATA+TGG 0.276438 5_4:-63937186 Msa0863860:CDS
GAAAATAAGAATGACTTATT+AGG 0.284202 5_4:-63934467 Msa0863860:CDS
AACTCTACCGTTCGTTGCTT+TGG 0.302769 5_4:+63933244 None:intergenic
CAAAAGGGTGAAAATATTAA+AGG 0.308079 5_4:-63934498 Msa0863860:CDS
GAGGAAGTATTACAAATCTT+TGG 0.316129 5_4:-63934254 Msa0863860:CDS
TCTCCATACAAAATCCTATA+TGG 0.323570 5_4:+63937082 None:intergenic
GTTATTTCTCGAACAACATT+TGG 0.349051 5_4:-63934829 Msa0863860:CDS
CAATGATTTAATTAGAAAAT+GGG 0.357344 5_4:-63934923 Msa0863860:CDS
TTGCAGGTTTGTACCTACTA+TGG 0.359334 5_4:-63934582 Msa0863860:intron
CAACACAATGTTAAAATTCA+TGG 0.363907 5_4:-63936968 Msa0863860:intron
GAATATTGAAGATGTAATTC+AGG 0.371272 5_4:-63934381 Msa0863860:CDS
ACCAATTACAAACAGAGAAA+TGG 0.372065 5_4:-63937236 Msa0863860:exon
CTTGCCCTTGCTTGCCACTC+AGG 0.379083 5_4:+63934278 None:intergenic
TTCTCTATTGGAAGCAAAGA+TGG 0.382599 5_4:-63933171 Msa0863860:CDS
TTTAACATTGTGTTGGATGT+AGG 0.388508 5_4:+63936976 None:intergenic
TATATCATCGGTGAGATTCA+TGG 0.389863 5_4:+63937015 None:intergenic
AAAAGTGGAGCAAGCATAGA+AGG 0.399835 5_4:-63935210 Msa0863860:CDS
ATTTCTCTGTTTGTAATTGG+TGG 0.401543 5_4:+63937238 None:intergenic
GCACCATGATTGTGAATTAT+GGG 0.407055 5_4:-63933315 Msa0863860:CDS
ATAGGAGGATTAATGAAATT+GGG 0.411585 5_4:-63934556 Msa0863860:CDS
CCACTCCAGCAGATAATGTT+AGG 0.418409 5_4:+63933363 None:intergenic
TTTCTCTGTTTGTAATTGGT+GGG 0.420505 5_4:+63937239 None:intergenic
CAAACCAAGCGTCACAATGA+TGG 0.423439 5_4:+63937192 None:intergenic
TTAAGAGAACAAGGTCTTCA+AGG 0.436422 5_4:-63937109 Msa0863860:CDS
TTTCGCGAAAGCTCAATTAT+GGG 0.436932 5_4:+63933413 None:intergenic
TTCCATTTGGATGGGGTCCT+AGG 0.438258 5_4:-63933214 Msa0863860:CDS
TGCTGAATTGGTTGTGGTTG+AGG 0.441437 5_4:-63937153 Msa0863860:CDS
GGGCATGGAGGATGCTGAAT+TGG 0.445072 5_4:-63937165 Msa0863860:CDS
TTTGGAAGTAGTTATGAAGA+AGG 0.447029 5_4:-63934811 Msa0863860:CDS
TTAAGGATATGATCAACAAA+AGG 0.447635 5_4:-63934514 Msa0863860:CDS
TTAACATTGTGTTGGATGTA+GGG 0.447689 5_4:+63936977 None:intergenic
TTGTACCTACTATGGTCAAT+AGG 0.448076 5_4:-63934574 Msa0863860:CDS
TTGCCCTTGCTTGCCACTCA+GGG 0.451750 5_4:+63934279 None:intergenic
CATAAAGGATCTTATTAAGA+TGG 0.454230 5_4:-63937059 Msa0863860:CDS
TGTAATTGGTGGGGCAAAGA+AGG 0.460936 5_4:+63937249 None:intergenic
AGATATAAAATCTTCACTTA+AGG 0.461164 5_4:-63934531 Msa0863860:CDS
TCTATTTCACATGATCCATC+TGG 0.465020 5_4:+63934886 None:intergenic
AATACATCTACGATTTGCTC+AGG 0.469074 5_4:+63935313 None:intergenic
TTCTCTGTTTGTAATTGGTG+GGG 0.469380 5_4:+63937240 None:intergenic
ATTCCCATCATTGTGACGCT+TGG 0.486344 5_4:-63937196 Msa0863860:CDS
GTCTTCAAGGGAATCCATAT+AGG 0.486578 5_4:-63937096 Msa0863860:CDS
TTAAGAGCAATTACTGTGGC+TGG 0.493931 5_4:+63933089 None:intergenic
GATCATGTGAAATAGACATA+TGG 0.501447 5_4:-63934879 Msa0863860:CDS
ATCCTAGGACCCCATCCAAA+TGG 0.501917 5_4:+63933212 None:intergenic
GGATCTTATTAAGATGGAAA+AGG 0.509720 5_4:-63937053 Msa0863860:CDS
GGAGGATGCTGAATTGGTTG+TGG 0.511983 5_4:-63937159 Msa0863860:CDS
CATAACCTCATACAAAATCA+TGG 0.515351 5_4:+63933448 None:intergenic
AACTTTACTTGTTTGGACAA+TGG 0.516866 5_4:-63934318 Msa0863860:CDS
GGACAATGGTATTATTGAGT+AGG 0.517455 5_4:-63934304 Msa0863860:CDS
TGTGACGCTTGGTTTGATAT+GGG 0.517779 5_4:-63937185 Msa0863860:CDS
AAACCAAGCGTCACAATGAT+GGG 0.521180 5_4:+63937193 None:intergenic
TAGTGGTCTTGCAAGTCTTG+AGG 0.522354 5_4:-63935236 Msa0863860:CDS
AGTGGTCTTGCAAGTCTTGA+GGG 0.523272 5_4:-63935235 Msa0863860:CDS
GGTTCTGTGAGAATCACCCT+TGG 0.525245 5_4:+63935334 None:intergenic
CCTAACATTATCTGCTGGAG+TGG 0.533125 5_4:-63933363 Msa0863860:CDS
CTGAGTGGCAAGCAAGGGCA+AGG 0.533809 5_4:-63934277 Msa0863860:CDS
TAAGGATATGATCAACAAAA+GGG 0.535704 5_4:-63934513 Msa0863860:CDS
CGCTTGGTTTGATATGGGCA+TGG 0.537175 5_4:-63937180 Msa0863860:CDS
GCAAGTTGTTCTACTTTGCA+GGG 0.538368 5_4:-63934355 Msa0863860:CDS
CACCCCATAATTCACAATCA+TGG 0.542452 5_4:+63933312 None:intergenic
AACATTATCTGCTGGAGTGG+AGG 0.542694 5_4:-63933360 Msa0863860:CDS
AGTCTTAATTACCTCCATAG+AGG 0.552576 5_4:+63934718 None:intergenic
ACACGGAAACAACGTGAATG+TGG 0.557304 5_4:-63934408 Msa0863860:CDS
CATCACTAGCCAAATTCTGA+AGG 0.557704 5_4:+63934851 None:intergenic
TTAAGATGGAAAAGGAAGCC+AGG 0.557908 5_4:-63937045 Msa0863860:CDS
ATTGCTCTTAAGCCACAATA+CGG 0.558864 5_4:-63933077 Msa0863860:CDS
CAAGTCTTGAGGGAGAAAAG+TGG 0.561871 5_4:-63935225 Msa0863860:CDS
ATCCTCCTATTGACCATAGT+AGG 0.562488 5_4:+63934569 None:intergenic
GGTACCCTGAGTGGCAAGCA+AGG 0.562549 5_4:-63934283 Msa0863860:CDS
TGGGGTCCTAGGATCTGCAT+TGG 0.563202 5_4:-63933203 Msa0863860:CDS
GAGAAGCTGTTAAGAGAACA+AGG 0.565605 5_4:-63937118 Msa0863860:CDS
GGAGACCTAACATTATCTGC+TGG 0.567226 5_4:-63933368 Msa0863860:CDS
GCTGGAGCATGAGCATAGGC+TGG 0.568382 5_4:+63933107 None:intergenic
GTGAAAATATTAAAGGAAGG+TGG 0.568967 5_4:-63934491 Msa0863860:CDS
GAGATTCATGGATTTAGACC+TGG 0.569485 5_4:+63937027 None:intergenic
AGGGTGAAAATATTAAAGGA+AGG 0.573235 5_4:-63934494 Msa0863860:CDS
CTAGCCAAATTCTGAAGGGA+AGG 0.581397 5_4:+63934856 None:intergenic
ATAATATGAGCACCGTATTG+TGG 0.582346 5_4:+63933065 None:intergenic
TACCTACTATGGTCAATAGG+AGG 0.583831 5_4:-63934571 Msa0863860:CDS
ATCACTAGCCAAATTCTGAA+GGG 0.584793 5_4:+63934852 None:intergenic
TAAGAGAACAAGGTCTTCAA+GGG 0.585971 5_4:-63937108 Msa0863860:CDS
GTGGCAAGCAAGGGCAAGGG+AGG 0.589601 5_4:-63934273 Msa0863860:CDS
GAGGAAATGTTGTCTCCAGA+TGG 0.591198 5_4:-63934901 Msa0863860:CDS
TTGGTTTGGAACAAAACCAA+GGG 0.591413 5_4:-63935350 Msa0863860:CDS
CACGGAAACAACGTGAATGT+GGG 0.596449 5_4:-63934407 Msa0863860:CDS
TACACGTGGCGTTATATCAT+CGG 0.596840 5_4:+63937003 None:intergenic
TTACAAACAGAGAAATGGAA+TGG 0.598701 5_4:-63937231 Msa0863860:exon
CGCGAAAGCTCAATTATGGG+AGG 0.599936 5_4:+63933416 None:intergenic
CACAAGGAAATTAAAGAACA+CGG 0.600350 5_4:-63934425 Msa0863860:CDS
TGAGTGGCAAGCAAGGGCAA+GGG 0.606267 5_4:-63934276 Msa0863860:CDS
TGTGGCTGGAGCATGAGCAT+AGG 0.608845 5_4:+63933103 None:intergenic
CGTGTTCTTTAATTTCCTTG+TGG 0.610561 5_4:+63934426 None:intergenic
TTTGGTTTGGAACAAAACCA+AGG 0.613316 5_4:-63935351 Msa0863860:CDS
TGATTTAATTAGAAAATGGG+AGG 0.627740 5_4:-63934920 Msa0863860:CDS
GTACCCTGAGTGGCAAGCAA+GGG 0.646016 5_4:-63934282 Msa0863860:CDS
GGAATTTCCAAAGCAACGAA+CGG 0.652740 5_4:-63933251 Msa0863860:CDS
CACCATGATTGTGAATTATG+GGG 0.656392 5_4:-63933314 Msa0863860:CDS
TCTTCTAGAGACAAACCACA+AGG 0.719349 5_4:-63934441 Msa0863860:CDS
TATTGAGTAGGTACCCTGAG+TGG 0.723660 5_4:-63934292 Msa0863860:CDS
TTGGTTTGATATGGGCATGG+AGG 0.730690 5_4:-63937177 Msa0863860:CDS
TGGATGTAGGGAATTACACG+TGG 0.736158 5_4:+63936989 None:intergenic
TGGCTTAAGAGCAATTACTG+TGG 0.764853 5_4:+63933085 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTAATAATTT+CGG + chr5_4:63934018-63934037 None:intergenic 0.0%
!!! TATTTCTGTTTAATATAATT+TGG - chr5_4:63933701-63933720 Msa0863860:intron 10.0%
!! ATTTCTGTTTAATATAATTT+GGG - chr5_4:63933702-63933721 Msa0863860:intron 10.0%
!! GTTTATTTAAATGATTTAAT+TGG + chr5_4:63933809-63933828 None:intergenic 10.0%
!! AATGTTTAATTATGTTATTA+AGG - chr5_4:63934129-63934148 Msa0863860:intron 10.0%
!! ATGTTTAATTATGTTATTAA+GGG - chr5_4:63934130-63934149 Msa0863860:intron 10.0%
!! AAAGATAAAACAAATTAAAT+TGG + chr5_4:63934169-63934188 None:intergenic 10.0%
!!! TAAAAAAAATAAAGTTTGTT+AGG - chr5_4:63934321-63934340 Msa0863860:CDS 10.0%
!!! AAAAAAAATAAAGTTTGTTA+GGG - chr5_4:63934322-63934341 Msa0863860:CDS 10.0%
!!! ACAAGTTTTTTTTAATTAAA+TGG + chr5_4:63934548-63934567 None:intergenic 10.0%
!!! AAATTTTATGATTATTCTTT+GGG + chr5_4:63935020-63935039 None:intergenic 10.0%
!!! AAAATTTTATGATTATTCTT+TGG + chr5_4:63935021-63935040 None:intergenic 10.0%
!! ATTTCTAAATATTTAGTAAA+GGG + chr5_4:63935152-63935171 None:intergenic 10.0%
!! AATTTCTAAATATTTAGTAA+AGG + chr5_4:63935153-63935172 None:intergenic 10.0%
!! AACATATAAAATATTCAAAA+TGG - chr5_4:63936475-63936494 Msa0863860:intron 10.0%
!! ACATATAAAATATTCAAAAT+GGG - chr5_4:63936476-63936495 Msa0863860:intron 10.0%
!!! TATAATTTTTTTGTCATTAT+AGG - chr5_4:63936815-63936834 Msa0863860:intron 10.0%
!! ATAAGTCAAAATAATGTATA+TGG - chr5_4:63933486-63933505 Msa0863860:intron 15.0%
!! ATTCAAGATAATTTATGATT+TGG - chr5_4:63933861-63933880 Msa0863860:intron 15.0%
!!! TTGTTTTATCTTTAATTTTC+AGG - chr5_4:63934176-63934195 Msa0863860:intron 15.0%
!!! TGTTTTATCTTTAATTTTCA+GGG - chr5_4:63934177-63934196 Msa0863860:intron 15.0%
!! AAAAAAACTTGTAATTATGT+TGG - chr5_4:63934656-63934675 Msa0863860:intron 15.0%
!! AAAAAAACTTGTAATTATGT+TGG - chr5_4:63934656-63934675 Msa0863860:intron 15.0%
!! AAAAAAACTTGTAATTATGT+TGG - chr5_4:63934656-63934675 Msa0863860:intron 15.0%
!!! AAGAATTTTTTTATTTGGTT+TGG - chr5_4:63934925-63934944 Msa0863860:CDS 15.0%
!! CAATGATTTAATTAGAAAAT+GGG - chr5_4:63935366-63935385 Msa0863860:CDS 15.0%
!!! TTGAATATTTTATATGTTAG+CGG + chr5_4:63936473-63936492 None:intergenic 15.0%
!!! TTAAAAATCAATCACAATTT+TGG - chr5_4:63936559-63936578 Msa0863860:intron 15.0%
!! AAAATATTAGATTCCAATTA+GGG + chr5_4:63936629-63936648 None:intergenic 15.0%
!! AAAAATATTAGATTCCAATT+AGG + chr5_4:63936630-63936649 None:intergenic 15.0%
!!! TAATAATGCTTTGAATTTTT+TGG + chr5_4:63936712-63936731 None:intergenic 15.0%
!!! TTTTTTTTTCCTAACAAACT+TGG - chr5_4:63933743-63933762 Msa0863860:intron 20.0%
!!! TTTTTTTTCCTAACAAACTT+GGG - chr5_4:63933744-63933763 Msa0863860:intron 20.0%
!! TAAATAAACTCTTCTACAAA+TGG - chr5_4:63933820-63933839 Msa0863860:intron 20.0%
!! ATTTAGATAAACTCTTCTAA+AGG - chr5_4:63933934-63933953 Msa0863860:intron 20.0%
!! GGTGAATTTAATAACTTATT+TGG - chr5_4:63933967-63933986 Msa0863860:intron 20.0%
!! AGTAGTAATATATATTGTCT+AGG + chr5_4:63934041-63934060 None:intergenic 20.0%
!!! ATATCTAATTAATTTGACGA+TGG - chr5_4:63934251-63934270 Msa0863860:CDS 20.0%
!!! TTTTGTACTTTAATTAAGGT+TGG + chr5_4:63934374-63934393 None:intergenic 20.0%
!!! TGGTTTTTGTACTTTAATTA+AGG + chr5_4:63934378-63934397 None:intergenic 20.0%
!!! AAAATGTTTAAAGTTATCGA+TGG + chr5_4:63934468-63934487 None:intergenic 20.0%
!! ATTTACACAAATTTACTTGA+TGG - chr5_4:63934512-63934531 Msa0863860:CDS 20.0%
!! AAAAAAACTTGTAATTGTGT+TGG - chr5_4:63934556-63934575 Msa0863860:CDS 20.0%
!!! TAGGGAAGAATTTTTTTATT+TGG - chr5_4:63934920-63934939 Msa0863860:CDS 20.0%
!! GCAATGATTTAATTAGAAAA+TGG - chr5_4:63935365-63935384 Msa0863860:CDS 20.0%
!! AGATATAAAATCTTCACTTA+AGG - chr5_4:63935758-63935777 Msa0863860:intron 20.0%
!! GAAAATAAGAATGACTTATT+AGG - chr5_4:63935822-63935841 Msa0863860:intron 20.0%
!!! AACAAAAAACCAAATTTTGA+TGG - chr5_4:63936059-63936078 Msa0863860:intron 20.0%
!!! ACAAAAAACCAAATTTTGAT+GGG - chr5_4:63936060-63936079 Msa0863860:intron 20.0%
!!! TCTTTCTAGTATTTTACTTA+AGG - chr5_4:63936152-63936171 Msa0863860:intron 20.0%
!!! ATATTTTAGTATTTGGCATT+AGG - chr5_4:63936671-63936690 Msa0863860:intron 20.0%
!!! AAAATTCAAAGCATTATTAC+TGG - chr5_4:63936713-63936732 Msa0863860:intron 20.0%
!! TATACTACAAGTAAGTATTA+TGG + chr5_4:63936799-63936818 None:intergenic 20.0%
!! AATCCATATAGGATTTTGTA+TGG - chr5_4:63933204-63933223 Msa0863860:CDS 25.0%
! CATAAAGGATCTTATTAAGA+TGG - chr5_4:63933230-63933249 Msa0863860:CDS 25.0%
!!! CATGAATTTTAACATTGTGT+TGG + chr5_4:63933323-63933342 None:intergenic 25.0%
! CAACACAATGTTAAAATTCA+TGG - chr5_4:63933321-63933340 Msa0863860:CDS 25.0%
! TGAATTCAACTTTGTATACA+GGG + chr5_4:63933846-63933865 None:intergenic 25.0%
! TTGAATTCAACTTTGTATAC+AGG + chr5_4:63933847-63933866 None:intergenic 25.0%
! AAAAACCACTTGAATCTATT+TGG - chr5_4:63934390-63934409 Msa0863860:CDS 25.0%
! TAAAGTTGCAAATGTTATGT+AGG - chr5_4:63934702-63934721 Msa0863860:intron 25.0%
! AAAGTTGCAAATGTTATGTA+GGG - chr5_4:63934703-63934722 Msa0863860:intron 25.0%
!!! ATTTTCAAGTTACTAGTTAG+TGG - chr5_4:63935036-63935055 Msa0863860:intron 25.0%
! TTTCCATTCAGAAAAATTGA+AGG - chr5_4:63935116-63935135 Msa0863860:intron 25.0%
!! TAACCTTCAATTTTTCTGAA+TGG + chr5_4:63935122-63935141 None:intergenic 25.0%
!!! GCTTTTTTTTCCTTCATTTT+TGG - chr5_4:63935175-63935194 Msa0863860:CDS 25.0%
!!! TTGCAACTTTTGAAAAAAGT+TGG + chr5_4:63935349-63935368 None:intergenic 25.0%
! TGATTTAATTAGAAAATGGG+AGG - chr5_4:63935369-63935388 Msa0863860:CDS 25.0%
!! TGAATTTTTACATTCCTCTA+TGG - chr5_4:63935557-63935576 Msa0863860:intron 25.0%
! TTTGTAATTAATCACTAGCT+AGG - chr5_4:63935656-63935675 Msa0863860:intron 25.0%
! AATAGGAGGATTAATGAAAT+TGG - chr5_4:63935732-63935751 Msa0863860:intron 25.0%
! ATAGGAGGATTAATGAAATT+GGG - chr5_4:63935733-63935752 Msa0863860:intron 25.0%
! TTAAGGATATGATCAACAAA+AGG - chr5_4:63935775-63935794 Msa0863860:intron 25.0%
! TAAGGATATGATCAACAAAA+GGG - chr5_4:63935776-63935795 Msa0863860:intron 25.0%
! CAAAAGGGTGAAAATATTAA+AGG - chr5_4:63935791-63935810 Msa0863860:intron 25.0%
! GAATATTGAAGATGTAATTC+AGG - chr5_4:63935908-63935927 Msa0863860:intron 25.0%
! TTATTTAGCCCATCAAAATT+TGG + chr5_4:63936071-63936090 None:intergenic 25.0%
!! ACTTTTGTCCAACAAATTTA+AGG - chr5_4:63936180-63936199 Msa0863860:intron 25.0%
!! CAAGTAATGCATCTTTTAAA+CGG + chr5_4:63936369-63936388 None:intergenic 25.0%
! AGAATTAGTGACCTAAATTT+CGG - chr5_4:63936519-63936538 Msa0863860:intron 25.0%
!!! AAATATTAGAGGCATTTTTC+TGG + chr5_4:63936657-63936676 None:intergenic 25.0%
!!! GCCTCTAATATTTTAGTATT+TGG - chr5_4:63936664-63936683 Msa0863860:intron 25.0%
! GCCAAATACTAAAATATTAG+AGG + chr5_4:63936668-63936687 None:intergenic 25.0%
!!! AGAGTTTCATTTTTTCCATT+TGG - chr5_4:63937062-63937081 Msa0863860:CDS 25.0%
!!! TTTCATTTTTTCCATTTGGA+TGG - chr5_4:63937066-63937085 Msa0863860:CDS 25.0%
!!! TTCATTTTTTCCATTTGGAT+GGG - chr5_4:63937067-63937086 Msa0863860:CDS 25.0%
! TCATATTATTCTGCGTAAAT+TGG - chr5_4:63937238-63937257 Msa0863860:exon 25.0%
TTTCTCTGTTTGTAATTGGT+GGG + chr5_4:63933053-63933072 None:intergenic 30.0%
ATTTCTCTGTTTGTAATTGG+TGG + chr5_4:63933054-63933073 None:intergenic 30.0%
ACCAATTACAAACAGAGAAA+TGG - chr5_4:63933053-63933072 Msa0863860:CDS 30.0%
TCCATTTCTCTGTTTGTAAT+TGG + chr5_4:63933057-63933076 None:intergenic 30.0%
TTACAAACAGAGAAATGGAA+TGG - chr5_4:63933058-63933077 Msa0863860:CDS 30.0%
TCTCCATACAAAATCCTATA+TGG + chr5_4:63933210-63933229 None:intergenic 30.0%
! GATTTTGTATGGAGACATAA+AGG - chr5_4:63933215-63933234 Msa0863860:CDS 30.0%
GGATCTTATTAAGATGGAAA+AGG - chr5_4:63933236-63933255 Msa0863860:CDS 30.0%
TTAACATTGTGTTGGATGTA+GGG + chr5_4:63933315-63933334 None:intergenic 30.0%
TTTAACATTGTGTTGGATGT+AGG + chr5_4:63933316-63933335 None:intergenic 30.0%
AAAGATGACACATGACATTT+AGG + chr5_4:63933383-63933402 None:intergenic 30.0%
ATATCGAGTTTGATTCCTTA+TGG - chr5_4:63933662-63933681 Msa0863860:intron 30.0%
! AATATCAACCCAAGTTTGTT+AGG + chr5_4:63933755-63933774 None:intergenic 30.0%
!! ACTTGGGTTGATATTGTTAA+AGG - chr5_4:63933760-63933779 Msa0863860:intron 30.0%
! TGTTTTGCTTATTGTGATGA+AGG - chr5_4:63934277-63934296 Msa0863860:CDS 30.0%
! TGAATTTAGGCATTTTCGAT+TGG - chr5_4:63934347-63934366 Msa0863860:CDS 30.0%
ATCAACCAAATAGATTCAAG+TGG + chr5_4:63934398-63934417 None:intergenic 30.0%
TTGAATCTATTTGGTTGATC+AGG - chr5_4:63934399-63934418 Msa0863860:CDS 30.0%
TAGAGTTGCAAATGTTATGT+AGG - chr5_4:63934602-63934621 Msa0863860:intron 30.0%
AGAGTTGCAAATGTTATGTA+GGG - chr5_4:63934603-63934622 Msa0863860:intron 30.0%
TAGAGTTGCAAATGTTATGT+AGG - chr5_4:63934602-63934621 Msa0863860:intron 30.0%
AGAGTTGCAAATGTTATGTA+GGG - chr5_4:63934603-63934622 Msa0863860:intron 30.0%
TAGAGTTGCAAATGTTATGT+AGG - chr5_4:63934602-63934621 Msa0863860:intron 30.0%
AGAGTTGCAAATGTTATGTA+GGG - chr5_4:63934603-63934622 Msa0863860:intron 30.0%
! ATTTTTCTGAATGGAAAGCA+GGG + chr5_4:63935113-63935132 None:intergenic 30.0%
! AATTTTTCTGAATGGAAAGC+AGG + chr5_4:63935114-63935133 None:intergenic 30.0%
TTTGCAGAAATGTACTTTGA+AGG + chr5_4:63935201-63935220 None:intergenic 30.0%
GATCATGTGAAATAGACATA+TGG - chr5_4:63935410-63935429 Msa0863860:intron 30.0%
!! GTTATTTCTCGAACAACATT+TGG - chr5_4:63935460-63935479 Msa0863860:intron 30.0%
TTTGGAAGTAGTTATGAAGA+AGG - chr5_4:63935478-63935497 Msa0863860:intron 30.0%
! ATTTTTACATTCCTCTATGG+AGG - chr5_4:63935560-63935579 Msa0863860:intron 30.0%
AGGGTGAAAATATTAAAGGA+AGG - chr5_4:63935795-63935814 Msa0863860:intron 30.0%
GTGAAAATATTAAAGGAAGG+TGG - chr5_4:63935798-63935817 Msa0863860:intron 30.0%
CACAAGGAAATTAAAGAACA+CGG - chr5_4:63935864-63935883 Msa0863860:intron 30.0%
CTACTTCAACTTTACTTGTT+TGG - chr5_4:63935964-63935983 Msa0863860:intron 30.0%
AACTTTACTTGTTTGGACAA+TGG - chr5_4:63935971-63935990 Msa0863860:intron 30.0%
!! GAGGAAGTATTACAAATCTT+TGG - chr5_4:63936035-63936054 Msa0863860:intron 30.0%
TGACAAAGCCTTAAATTTGT+TGG + chr5_4:63936191-63936210 None:intergenic 30.0%
ACAGAAATTATGACCGAATT+CGG - chr5_4:63936447-63936466 Msa0863860:intron 30.0%
! CTGAAAGCTTTATATTCAAC+TGG - chr5_4:63936745-63936764 Msa0863860:intron 30.0%
ACAAGTAAGTATTATGGCTT+TGG + chr5_4:63936793-63936812 None:intergenic 30.0%
CATAACCTCATACAAAATCA+TGG + chr5_4:63936844-63936863 None:intergenic 30.0%
GTTGAGAAAAATGTGAAACT+TGG - chr5_4:63936900-63936919 Msa0863860:intron 30.0%
TCATGGTGCAACAATATAAT+TGG + chr5_4:63936963-63936982 None:intergenic 30.0%
! TTCAATCCTGAAAGATTTTC+TGG - chr5_4:63937014-63937033 Msa0863860:CDS 30.0%
!!! TCATTTTTTCCATTTGGATG+GGG - chr5_4:63937068-63937087 Msa0863860:CDS 30.0%
! TGGACAAAACTTTTCTCTAT+TGG - chr5_4:63937106-63937125 Msa0863860:CDS 30.0%
TTCTCTGTTTGTAATTGGTG+GGG + chr5_4:63933052-63933071 None:intergenic 35.0%
TTAAGAGAACAAGGTCTTCA+AGG - chr5_4:63933180-63933199 Msa0863860:CDS 35.0%
TAAGAGAACAAGGTCTTCAA+GGG - chr5_4:63933181-63933200 Msa0863860:CDS 35.0%
TATATCATCGGTGAGATTCA+TGG + chr5_4:63933277-63933296 None:intergenic 35.0%
! TATTGTTGGTAAGTGGTAAC+TGG - chr5_4:63933602-63933621 Msa0863860:intron 35.0%
! TCTTCTAAAGGTTCACACTA+AGG - chr5_4:63933946-63933965 Msa0863860:intron 35.0%
! GTTTGTTAGGGCTTGAATTT+AGG - chr5_4:63934334-63934353 Msa0863860:CDS 35.0%
!! TTTGGTTTGGAACAAAACCA+AGG - chr5_4:63934938-63934957 Msa0863860:CDS 35.0%
!! TTGGTTTGGAACAAAACCAA+GGG - chr5_4:63934939-63934958 Msa0863860:CDS 35.0%
! AATACATCTACGATTTGCTC+AGG + chr5_4:63934979-63934998 None:intergenic 35.0%
! ACTTTGAAGGCCAAAAATGA+AGG + chr5_4:63935188-63935207 None:intergenic 35.0%
TCTATTTCACATGATCCATC+TGG + chr5_4:63935406-63935425 None:intergenic 35.0%
ATCACTAGCCAAATTCTGAA+GGG + chr5_4:63935440-63935459 None:intergenic 35.0%
AGTCTTAATTACCTCCATAG+AGG + chr5_4:63935574-63935593 None:intergenic 35.0%
GTAATTAATCACTAGCTAGG+AGG - chr5_4:63935659-63935678 Msa0863860:intron 35.0%
AAACATGTCATTCGTGTAAC+TGG + chr5_4:63935685-63935704 None:intergenic 35.0%
CGAATGACATGTTTATTTGC+AGG - chr5_4:63935691-63935710 Msa0863860:intron 35.0%
TTGTACCTACTATGGTCAAT+AGG - chr5_4:63935715-63935734 Msa0863860:intron 35.0%
! CGTGTTCTTTAATTTCCTTG+TGG + chr5_4:63935866-63935885 None:intergenic 35.0%
GGACAATGGTATTATTGAGT+AGG - chr5_4:63935985-63936004 Msa0863860:intron 35.0%
!! GAGGTCTAAGCTTTTGAAAA+TGG - chr5_4:63936218-63936237 Msa0863860:intron 35.0%
TCCTTAGCGACAAAAAAATC+CGG + chr5_4:63936399-63936418 None:intergenic 35.0%
! TACTTTTGCGACCGAAATTT+AGG + chr5_4:63936533-63936552 None:intergenic 35.0%
! GGTTACCATGATTTTGTATG+AGG - chr5_4:63936836-63936855 Msa0863860:intron 35.0%
TTTCGCGAAAGCTCAATTAT+GGG + chr5_4:63936879-63936898 None:intergenic 35.0%
TGCACCATGATTGTGAATTA+TGG - chr5_4:63936973-63936992 Msa0863860:CDS 35.0%
GCACCATGATTGTGAATTAT+GGG - chr5_4:63936974-63936993 Msa0863860:CDS 35.0%
CACCATGATTGTGAATTATG+GGG - chr5_4:63936975-63936994 Msa0863860:CDS 35.0%
! AATCCTGAAAGATTTTCTGG+AGG - chr5_4:63937017-63937036 Msa0863860:CDS 35.0%
ATTCCTCCAGAAAATCTTTC+AGG + chr5_4:63937023-63937042 None:intergenic 35.0%
TTCTCTATTGGAAGCAAAGA+TGG - chr5_4:63937118-63937137 Msa0863860:CDS 35.0%
ATTGCTCTTAAGCCACAATA+CGG - chr5_4:63937212-63937231 Msa0863860:CDS 35.0%
! ATAATATGAGCACCGTATTG+TGG + chr5_4:63937227-63937246 None:intergenic 35.0%
AAACCAAGCGTCACAATGAT+GGG + chr5_4:63933099-63933118 None:intergenic 40.0%
! TTGTGACGCTTGGTTTGATA+TGG - chr5_4:63933103-63933122 Msa0863860:CDS 40.0%
! TGTGACGCTTGGTTTGATAT+GGG - chr5_4:63933104-63933123 Msa0863860:CDS 40.0%
! AACAGCTTCTCTAGCTTCTT+TGG + chr5_4:63933162-63933181 None:intergenic 40.0%
GAGAAGCTGTTAAGAGAACA+AGG - chr5_4:63933171-63933190 Msa0863860:CDS 40.0%
GTCTTCAAGGGAATCCATAT+AGG - chr5_4:63933193-63933212 Msa0863860:CDS 40.0%
TTAAGATGGAAAAGGAAGCC+AGG - chr5_4:63933244-63933263 Msa0863860:CDS 40.0%
GAGATTCATGGATTTAGACC+TGG + chr5_4:63933265-63933284 None:intergenic 40.0%
TACACGTGGCGTTATATCAT+CGG + chr5_4:63933289-63933308 None:intergenic 40.0%
CAAAGTCCAGTGCATATTGT+TGG - chr5_4:63933588-63933607 Msa0863860:intron 40.0%
CACTTACCAACAATATGCAC+TGG + chr5_4:63933597-63933616 None:intergenic 40.0%
! CAGTGCATATTGTTGGTAAG+TGG - chr5_4:63933595-63933614 Msa0863860:intron 40.0%
TAGCAATCAAGTGCACCATA+AGG + chr5_4:63933680-63933699 None:intergenic 40.0%
CTATTTGGTTGATCAGGACA+CGG - chr5_4:63934405-63934424 Msa0863860:CDS 40.0%
TATTTGGTTGATCAGGACAC+GGG - chr5_4:63934406-63934425 Msa0863860:CDS 40.0%
AAAAGTGGAGCAAGCATAGA+AGG - chr5_4:63935079-63935098 Msa0863860:intron 40.0%
CATCACTAGCCAAATTCTGA+AGG + chr5_4:63935441-63935460 None:intergenic 40.0%
TTGCAGGTTTGTACCTACTA+TGG - chr5_4:63935707-63935726 Msa0863860:intron 40.0%
TACCTACTATGGTCAATAGG+AGG - chr5_4:63935718-63935737 Msa0863860:intron 40.0%
ATCCTCCTATTGACCATAGT+AGG + chr5_4:63935723-63935742 None:intergenic 40.0%
! TCTTCTAGAGACAAACCACA+AGG - chr5_4:63935848-63935867 Msa0863860:intron 40.0%
TGCAAGTTGTTCTACTTTGC+AGG - chr5_4:63935933-63935952 Msa0863860:intron 40.0%
GCAAGTTGTTCTACTTTGCA+GGG - chr5_4:63935934-63935953 Msa0863860:intron 40.0%
! AAGGCTTTGTCACAATCATG+AGG - chr5_4:63936199-63936218 Msa0863860:intron 40.0%
!! AAGCTTTTGAAAATGGCTCC+TGG - chr5_4:63936225-63936244 Msa0863860:intron 40.0%
!! AGCTTTTGAAAATGGCTCCT+GGG - chr5_4:63936226-63936245 Msa0863860:intron 40.0%
CTAAGGATCCTATTGTCATG+AGG - chr5_4:63936264-63936283 Msa0863860:intron 40.0%
TACCTCGTACTGAGACATAT+CGG + chr5_4:63936321-63936340 None:intergenic 40.0%
! ATGCATTACTTGTTAGCGAC+CGG - chr5_4:63936377-63936396 Msa0863860:intron 40.0%
!!! ACCGGATTTTTTTGTCGCTA+AGG - chr5_4:63936395-63936414 Msa0863860:intron 40.0%
TTGTCGCTAAGGATGAAAGT+CGG - chr5_4:63936406-63936425 Msa0863860:intron 40.0%
TATATGTTAGCGGCCGAATT+CGG + chr5_4:63936463-63936482 None:intergenic 40.0%
GTTTCGCGAAAGCTCAATTA+TGG + chr5_4:63936880-63936899 None:intergenic 40.0%
CACCCCATAATTCACAATCA+TGG + chr5_4:63936980-63936999 None:intergenic 40.0%
GGAATTTCCAAAGCAACGAA+CGG - chr5_4:63937038-63937057 Msa0863860:CDS 40.0%
! TTTTGTCCAATGCAGATCCT+AGG + chr5_4:63937095-63937114 None:intergenic 40.0%
TTAAGAGCAATTACTGTGGC+TGG + chr5_4:63937203-63937222 None:intergenic 40.0%
TGGCTTAAGAGCAATTACTG+TGG + chr5_4:63937207-63937226 None:intergenic 40.0%
ATTCCCATCATTGTGACGCT+TGG - chr5_4:63933093-63933112 Msa0863860:CDS 45.0%
CAAACCAAGCGTCACAATGA+TGG + chr5_4:63933100-63933119 None:intergenic 45.0%
! TTGGTTTGATATGGGCATGG+AGG - chr5_4:63933112-63933131 Msa0863860:CDS 45.0%
TGCTGAATTGGTTGTGGTTG+AGG - chr5_4:63933136-63933155 Msa0863860:CDS 45.0%
TGGATGTAGGGAATTACACG+TGG + chr5_4:63933303-63933322 None:intergenic 45.0%
! TAGTGGTCTTGCAAGTCTTG+AGG - chr5_4:63935053-63935072 Msa0863860:intron 45.0%
! AGTGGTCTTGCAAGTCTTGA+GGG - chr5_4:63935054-63935073 Msa0863860:intron 45.0%
CAAGTCTTGAGGGAGAAAAG+TGG - chr5_4:63935064-63935083 Msa0863860:intron 45.0%
GAGGAAATGTTGTCTCCAGA+TGG - chr5_4:63935388-63935407 Msa0863860:intron 45.0%
ATGGCCTTCCCTTCAGAATT+TGG - chr5_4:63935429-63935448 Msa0863860:intron 45.0%
! CTAGCCAAATTCTGAAGGGA+AGG + chr5_4:63935436-63935455 None:intergenic 45.0%
ACACGGAAACAACGTGAATG+TGG - chr5_4:63935881-63935900 Msa0863860:intron 45.0%
CACGGAAACAACGTGAATGT+GGG - chr5_4:63935882-63935901 Msa0863860:intron 45.0%
TATTGAGTAGGTACCCTGAG+TGG - chr5_4:63935997-63936016 Msa0863860:intron 45.0%
GGATCCTTAGAGCCATTTGA+GGG + chr5_4:63936254-63936273 None:intergenic 45.0%
AGGATCCTTAGAGCCATTTG+AGG + chr5_4:63936255-63936274 None:intergenic 45.0%
AGCGTAGACCTCATGACAAT+AGG + chr5_4:63936275-63936294 None:intergenic 45.0%
ACCTCGTACTGAGACATATC+GGG + chr5_4:63936320-63936339 None:intergenic 45.0%
CCAGGAATACATTTGCAGTG+TGG + chr5_4:63936600-63936619 None:intergenic 45.0%
CCACACTGCAAATGTATTCC+TGG - chr5_4:63936597-63936616 Msa0863860:intron 45.0%
TTCCTGGATCTGTCCCTAAT+TGG - chr5_4:63936613-63936632 Msa0863860:intron 45.0%
TTCCAATTAGGGACAGATCC+AGG + chr5_4:63936618-63936637 None:intergenic 45.0%
GGAGACCTAACATTATCTGC+TGG - chr5_4:63936921-63936940 Msa0863860:intron 45.0%
CCACTCCAGCAGATAATGTT+AGG + chr5_4:63936929-63936948 None:intergenic 45.0%
CCTAACATTATCTGCTGGAG+TGG - chr5_4:63936926-63936945 Msa0863860:intron 45.0%
AACATTATCTGCTGGAGTGG+AGG - chr5_4:63936929-63936948 Msa0863860:intron 45.0%
AACTCTACCGTTCGTTGCTT+TGG + chr5_4:63937048-63937067 None:intergenic 45.0%
!!! GTTTTTTTTTTTTAATTAAA+TGG + chr5_4:63934644-63934663 None:intergenic 5.0%
!!! GTTTTTTTTTTTTAATTAAA+TGG + chr5_4:63934644-63934663 None:intergenic 5.0%
!!! AGTTTTTTTTTTTAATTAAA+TGG + chr5_4:63934844-63934863 None:intergenic 5.0%
!! TAATAAATAATAAAGAAATA+AGG + chr5_4:63935309-63935328 None:intergenic 5.0%
!! TTTATTATTTATTATACTAT+AGG - chr5_4:63935315-63935334 Msa0863860:CDS 5.0%
! CGCTTGGTTTGATATGGGCA+TGG - chr5_4:63933109-63933128 Msa0863860:CDS 50.0%
GGAGGATGCTGAATTGGTTG+TGG - chr5_4:63933130-63933149 Msa0863860:CDS 50.0%
GGTTCTGTGAGAATCACCCT+TGG + chr5_4:63934958-63934977 None:intergenic 50.0%
! GGATCCCTCAAATGGCTCTA+AGG - chr5_4:63936247-63936266 Msa0863860:intron 50.0%
TCCCGATATGTCTCAGTACG+AGG - chr5_4:63936316-63936335 Msa0863860:intron 50.0%
CGCGAAAGCTCAATTATGGG+AGG + chr5_4:63936876-63936895 None:intergenic 50.0%
TTCCATTTGGATGGGGTCCT+AGG - chr5_4:63937075-63937094 Msa0863860:CDS 50.0%
ATCCTAGGACCCCATCCAAA+TGG + chr5_4:63937080-63937099 None:intergenic 50.0%
GGGCATGGAGGATGCTGAAT+TGG - chr5_4:63933124-63933143 Msa0863860:CDS 55.0%
GTACCCTGAGTGGCAAGCAA+GGG - chr5_4:63936007-63936026 Msa0863860:intron 55.0%
TTGCCCTTGCTTGCCACTCA+GGG + chr5_4:63936013-63936032 None:intergenic 55.0%
TGAGTGGCAAGCAAGGGCAA+GGG - chr5_4:63936013-63936032 Msa0863860:intron 55.0%
AGAGCCATTTGAGGGATCCC+AGG + chr5_4:63936246-63936265 None:intergenic 55.0%
TGGGGTCCTAGGATCTGCAT+TGG - chr5_4:63937086-63937105 Msa0863860:CDS 55.0%
TGTGGCTGGAGCATGAGCAT+AGG + chr5_4:63937189-63937208 None:intergenic 55.0%
GGTACCCTGAGTGGCAAGCA+AGG - chr5_4:63936006-63936025 Msa0863860:intron 60.0%
CTTGCCCTTGCTTGCCACTC+AGG + chr5_4:63936014-63936033 None:intergenic 60.0%
CTGAGTGGCAAGCAAGGGCA+AGG - chr5_4:63936012-63936031 Msa0863860:intron 60.0%
GGCTCCTGGGATCCCTCAAA+TGG - chr5_4:63936239-63936258 Msa0863860:intron 60.0%
GCTGGAGCATGAGCATAGGC+TGG + chr5_4:63937185-63937204 None:intergenic 60.0%
GTGGCAAGCAAGGGCAAGGG+AGG - chr5_4:63936016-63936035 Msa0863860:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 63933043 63937268 63933043 ID=Msa0863860;Name=Msa0863860
chr5_4 mRNA 63933043 63937268 63933043 ID=Msa0863860-mRNA-1;Parent=Msa0863860;Name=Msa0863860-mRNA-1;_AED=0.31;_eAED=0.31;_QI=29|1|0.6|1|1|1|5|0|516
chr5_4 exon 63933043 63933474 63933043 ID=Msa0863860-mRNA-1:exon:20105;Parent=Msa0863860-mRNA-1
chr5_4 exon 63934211 63934598 63934211 ID=Msa0863860-mRNA-1:exon:20104;Parent=Msa0863860-mRNA-1
chr5_4 exon 63934730 63934974 63934730 ID=Msa0863860-mRNA-1:exon:20103;Parent=Msa0863860-mRNA-1
chr5_4 exon 63935174 63935388 63935174 ID=Msa0863860-mRNA-1:exon:20102;Parent=Msa0863860-mRNA-1
chr5_4 exon 63936969 63937268 63936969 ID=Msa0863860-mRNA-1:exon:20101;Parent=Msa0863860-mRNA-1
chr5_4 five_prime_UTR 63937240 63937268 63937240 ID=Msa0863860-mRNA-1:five_prime_utr;Parent=Msa0863860-mRNA-1
chr5_4 CDS 63936969 63937239 63936969 ID=Msa0863860-mRNA-1:cds;Parent=Msa0863860-mRNA-1
chr5_4 CDS 63935174 63935388 63935174 ID=Msa0863860-mRNA-1:cds;Parent=Msa0863860-mRNA-1
chr5_4 CDS 63934730 63934974 63934730 ID=Msa0863860-mRNA-1:cds;Parent=Msa0863860-mRNA-1
chr5_4 CDS 63934211 63934598 63934211 ID=Msa0863860-mRNA-1:cds;Parent=Msa0863860-mRNA-1
chr5_4 CDS 63933043 63933474 63933043 ID=Msa0863860-mRNA-1:cds;Parent=Msa0863860-mRNA-1
Gene Sequence

>Msa0863860

ATGGAATGGTATTCAAGCATCATTCCCATCATTGTGACGCTTGGTTTGATATGGGCATGGAGGATGCTGAATTGGTTGTGGTTGAGGCCAAAGAAGCTAGAGAAGCTGTTAAGAGAACAAGGTCTTCAAGGGAATCCATATAGGATTTTGTATGGAGACATAAAGGATCTTATTAAGATGGAAAAGGAAGCCAGGTCTAAATCCATGAATCTCACCGATGATATAACGCCACGTGTAATTCCCTACATCCAACACAATGTTAAAATTCATGGGAAGAATTTTTTTATTTGGTTTGGAACAAAACCAAGGGTGATTCTCACAGAACCTGAGCAAATCGTAGATGTATTGAACAAGATCTCTGACTTCCCAAAGAATAATCATAAAATTTTCAAGTTACTAGTTAGTGGTCTTGCAAGTCTTGAGGGAGAAAAGTGGAGCAAGCATAGAAGGCTAATCAACCCTGCTTTCCATTCAGAAAAATTGAAGGTTATGACACCAACTTTTTTCAAAAGTTGCAATGATTTAATTAGAAAATGGGAGGAAATGTTGTCTCCAGATGGATCATGTGAAATAGACATATGGCCTTCCCTTCAGAATTTGGCTAGTGATGTTATTTCTCGAACAACATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTCAACTTCAAATTGAGCAAGCTGAACTTATGACAAAAGTTCAAATGAATTTTTACATTCCTCTATGGAGGTTTGTACCTACTATGGTCAATAGGAGGATTAATGAAATTGGGAAAGATATAAAATCTTCACTTAAGGATATGATCAACAAAAGGGTGAAAATATTAAAGGAAGGTGGAGAAAATAAGAATGACTTATTAGGTATTCTTCTAGAGACAAACCACAAGGAAATTAAAGAACACGGAAACAACGTGAATGTGGGAATGAATATTGAAGATGTAATTCAGGAATGCAAGTTGTTCTACTTTGCAGGGCAAGAAACTACTTCAACTTTACTTGTTTGGACAATGGTATTATTGAGTAGGTACCCTGAGTGGCAAGCAAGGGCAAGGGAGGAAGTATTACAAATCTTTGGCAACAAAAAACCAAATTTTGATGGGCTAAATAACTTGAAGATTGTTACCATGATTTTGTATGAGGTTATGAGATTATATCCTCCCATAATTGAGCTTTCGCGAAACGTTGAGAAAAATGTGAAACTTGGAGACCTAACATTATCTGCTGGAGTGGAGGTTTTCTTGCCAATTATATTGTTGCACCATGATTGTGAATTATGGGGTGATGATGCTAAAATGTTCAATCCTGAAAGATTTTCTGGAGGAATTTCCAAAGCAACGAACGGTAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGGATCTGCATTGGACAAAACTTTTCTCTATTGGAAGCAAAGATGGCAATGACATTGATTTTACAACATTTCTCATTTGAACTTTCTCCAGCCTATGCTCATGCTCCAGCCACAGTAATTGCTCTTAAGCCACAATACGGTGCTCATATTATTCTGCGTAAATTGGAAACATAA

Protein sequence

>Msa0863860

MEWYSSIIPIIVTLGLIWAWRMLNWLWLRPKKLEKLLREQGLQGNPYRILYGDIKDLIKMEKEARSKSMNLTDDITPRVIPYIQHNVKIHGKNFFIWFGTKPRVILTEPEQIVDVLNKISDFPKNNHKIFKLLVSGLASLEGEKWSKHRRLINPAFHSEKLKVMTPTFFKSCNDLIRKWEEMLSPDGSCEIDIWPSLQNLASDVISRTTFGSSYEEGRRIFQLQIEQAELMTKVQMNFYIPLWRFVPTMVNRRINEIGKDIKSSLKDMINKRVKILKEGGENKNDLLGILLETNHKEIKEHGNNVNVGMNIEDVIQECKLFYFAGQETTSTLLVWTMVLLSRYPEWQARAREEVLQIFGNKKPNFDGLNNLKIVTMILYEVMRLYPPIIELSRNVEKNVKLGDLTLSAGVEVFLPIILLHHDCELWGDDAKMFNPERFSGGISKATNGRVSFFPFGWGPRICIGQNFSLLEAKMAMTLILQHFSFELSPAYAHAPATVIALKPQYGAHIILRKLET*