Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682410 | XP_013455974.2 | 98.859 | 526 | 6 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682410 | sp|O82811|NRT21_ARATH | 78.828 | 529 | 109 | 1 | 1 | 526 | 1 | 529 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682410 | G7IRD1 | 98.859 | 526 | 6 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1069 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027860 | Msa0682410 | 0.804472 | 2.125644e-49 | -8.615850e-47 |
| Msa0028410 | Msa0682410 | -0.808982 | 2.370107e-50 | -8.615850e-47 |
| Msa0028450 | Msa0682410 | -0.812994 | 3.202764e-51 | -8.615850e-47 |
| Msa0059880 | Msa0682410 | 0.816268 | 6.036032e-52 | -8.615850e-47 |
| Msa0065190 | Msa0682410 | -0.808041 | 3.764086e-50 | -8.615850e-47 |
| Msa0072940 | Msa0682410 | 0.801070 | 1.070979e-48 | -8.615850e-47 |
| Msa0081300 | Msa0682410 | -0.803720 | 3.046301e-49 | -8.615850e-47 |
| Msa0107830 | Msa0682410 | 0.801309 | 9.568221e-49 | -8.615850e-47 |
| Msa0630130 | Msa0682410 | 0.812697 | 3.721117e-51 | -8.615850e-47 |
| Msa0634290 | Msa0682410 | 0.825515 | 4.494512e-54 | -8.615850e-47 |
| Msa0639400 | Msa0682410 | 0.916360 | 1.955593e-85 | -8.615850e-47 |
| Msa0639410 | Msa0682410 | 0.934111 | 6.694971e-96 | -8.615850e-47 |
| Msa0640290 | Msa0682410 | 0.802231 | 6.189720e-49 | -8.615850e-47 |
| Msa0668220 | Msa0682410 | 0.820435 | 6.871705e-53 | -8.615850e-47 |
| Msa0670360 | Msa0682410 | 0.802289 | 6.021268e-49 | -8.615850e-47 |
| Msa0682410 | Msa0682420 | 0.906991 | 8.200756e-81 | -8.615850e-47 |
| Msa0682410 | Msa0715210 | 0.813987 | 1.937411e-51 | -8.615850e-47 |
| Msa0682410 | Msa0728520 | 0.806855 | 6.715953e-50 | -8.615850e-47 |
| Msa0682410 | Msa0754530 | 0.815140 | 1.077006e-51 | -8.615850e-47 |
| Msa0682410 | Msa0757120 | 0.833892 | 4.107296e-56 | -8.615850e-47 |
| Msa0682410 | Msa0776540 | 0.809037 | 2.305963e-50 | -8.615850e-47 |
| Msa0682410 | Msa0798150 | 0.811632 | 6.352810e-51 | -8.615850e-47 |
| Msa0682410 | Msa0802600 | 0.804895 | 1.734478e-49 | -8.615850e-47 |
| Msa0682410 | Msa0814160 | 0.812010 | 5.255585e-51 | -8.615850e-47 |
| Msa0682410 | Msa0833230 | 0.819328 | 1.230139e-52 | -8.615850e-47 |
| Msa0682410 | Msa0854840 | 0.812837 | 3.467902e-51 | -8.615850e-47 |
| Msa0682410 | Msa0861730 | 0.801365 | 9.317686e-49 | -8.615850e-47 |
| Msa0682410 | Msa0868820 | 0.819058 | 1.417846e-52 | -8.615850e-47 |
| Msa0682410 | Msa0876150 | -0.800210 | 1.603522e-48 | -8.615850e-47 |
| Msa0682410 | Msa0896920 | 0.834852 | 2.358010e-56 | -8.615850e-47 |
| Msa0682410 | Msa0896950 | 0.800790 | 1.221881e-48 | -8.615850e-47 |
| Msa0682410 | Msa0902340 | 0.803190 | 3.924183e-49 | -8.615850e-47 |
| Msa0682410 | Msa0932900 | 0.813037 | 3.134105e-51 | -8.615850e-47 |
| Msa0682410 | Msa0932910 | 0.828290 | 9.758422e-55 | -8.615850e-47 |
| Msa0682410 | Msa0932930 | 0.850495 | 1.636329e-60 | -8.615850e-47 |
| Msa0682410 | Msa0933580 | 0.809931 | 1.482352e-50 | -8.615850e-47 |
| Msa0682410 | Msa0933590 | 0.812777 | 3.574132e-51 | -8.615850e-47 |
| Msa0682410 | Msa0933610 | 0.818457 | 1.941176e-52 | -8.615850e-47 |
| Msa0682410 | Msa0970790 | 0.811818 | 5.788409e-51 | -8.615850e-47 |
| Msa0682410 | Msa0970820 | 0.813160 | 2.945549e-51 | -8.615850e-47 |
| Msa0682410 | Msa0996980 | 0.815673 | 8.193592e-52 | -8.615850e-47 |
| Msa0682410 | Msa1006170 | 0.824662 | 7.148480e-54 | -8.615850e-47 |
| Msa0682410 | Msa1007980 | -0.805998 | 1.018099e-49 | -8.615850e-47 |
| Msa0682410 | Msa1024350 | 0.815105 | 1.096346e-51 | -8.615850e-47 |
| Msa0682410 | Msa1037360 | 0.800300 | 1.537215e-48 | -8.615850e-47 |
| Msa0682410 | Msa1048350 | 0.806011 | 1.011931e-49 | -8.615850e-47 |
| Msa0682410 | Msa1061670 | 0.802299 | 5.992653e-49 | -8.615850e-47 |
| Msa0682410 | Msa1064940 | 0.832222 | 1.069342e-55 | -8.615850e-47 |
| Msa0682410 | Msa1087380 | 0.804267 | 2.344870e-49 | -8.615850e-47 |
| Msa0682410 | Msa1100030 | 0.824969 | 6.051860e-54 | -8.615850e-47 |
| Msa0682410 | Msa1104960 | 0.806421 | 8.295681e-50 | -8.615850e-47 |
| Msa0682410 | Msa1106680 | 0.803157 | 3.985450e-49 | -8.615850e-47 |
| Msa0682410 | Msa1109890 | 0.802950 | 4.399505e-49 | -8.615850e-47 |
| Msa0682410 | Msa1147030 | 0.805016 | 1.636082e-49 | -8.615850e-47 |
| Msa0682410 | Msa1170340 | 0.810077 | 1.378846e-50 | -8.615850e-47 |
| Msa0682410 | Msa1239050 | 0.812242 | 4.678912e-51 | -8.615850e-47 |
| Msa0682410 | Msa1292700 | -0.825512 | 4.501276e-54 | -8.615850e-47 |
| Msa0682410 | Msa1310300 | -0.810218 | 1.286089e-50 | -8.615850e-47 |
| Msa0682410 | Msa1323120 | 0.806339 | 8.629717e-50 | -8.615850e-47 |
| Msa0682410 | Msa1350870 | 0.815123 | 1.086394e-51 | -8.615850e-47 |
| Msa0682410 | Msa1355330 | 0.807214 | 5.638935e-50 | -8.615850e-47 |
| Msa0682410 | Msa1355340 | 0.807126 | 5.885043e-50 | -8.615850e-47 |
| Msa0682410 | Msa1357840 | 0.803118 | 4.060724e-49 | -8.615850e-47 |
| Msa0682410 | Msa1411550 | 0.809176 | 2.153977e-50 | -8.615850e-47 |
| Msa0682410 | Msa1412360 | 0.815704 | 8.067649e-52 | -8.615850e-47 |
| Msa0682410 | Msa1419210 | 0.802294 | 6.005273e-49 | -8.615850e-47 |
| Msa0682410 | Msa1430940 | -0.802765 | 4.803101e-49 | -8.615850e-47 |
| Msa0682410 | Msa1456600 | 0.808229 | 3.431648e-50 | -8.615850e-47 |
| Msa0682410 | Msa1459610 | 0.811608 | 6.430322e-51 | -8.615850e-47 |
| Msa0124070 | Msa0682410 | -0.812596 | 3.914735e-51 | -8.615850e-47 |
| Msa0150910 | Msa0682410 | 0.821225 | 4.521828e-53 | -8.615850e-47 |
| Msa0207930 | Msa0682410 | 0.801331 | 9.469816e-49 | -8.615850e-47 |
| Msa0207970 | Msa0682410 | 0.802948 | 4.402663e-49 | -8.615850e-47 |
| Msa0213020 | Msa0682410 | -0.801144 | 1.034358e-48 | -8.615850e-47 |
| Msa0414480 | Msa0682410 | 0.803991 | 2.675990e-49 | -8.615850e-47 |
| Msa0418150 | Msa0682410 | 0.818761 | 1.655503e-52 | -8.615850e-47 |
| Msa0418160 | Msa0682410 | 0.802834 | 4.647282e-49 | -8.615850e-47 |
| Msa0454770 | Msa0682410 | 0.802017 | 6.847823e-49 | -8.615850e-47 |
| Msa0463140 | Msa0682410 | -0.805415 | 1.350040e-49 | -8.615850e-47 |
| Msa0464300 | Msa0682410 | 0.820006 | 8.614919e-53 | -8.615850e-47 |
| Msa0464310 | Msa0682410 | 0.809755 | 1.617625e-50 | -8.615850e-47 |
| Msa0266640 | Msa0682410 | 0.802647 | 5.079161e-49 | -8.615850e-47 |
| Msa0274260 | Msa0682410 | 0.822261 | 2.603574e-53 | -8.615850e-47 |
| Msa0278460 | Msa0682410 | 0.802004 | 6.889519e-49 | -8.615850e-47 |
| Msa0287720 | Msa0682410 | 0.804573 | 2.025011e-49 | -8.615850e-47 |
| Msa0307750 | Msa0682410 | -0.803997 | 2.668818e-49 | -8.615850e-47 |
| Msa0328090 | Msa0682410 | 0.801382 | 9.246515e-49 | -8.615850e-47 |
| Msa0335340 | Msa0682410 | 0.801622 | 8.254065e-49 | -8.615850e-47 |
| Msa0338900 | Msa0682410 | -0.802490 | 5.472742e-49 | -8.615850e-47 |
| Msa0343720 | Msa0682410 | 0.810173 | 1.314853e-50 | -8.615850e-47 |
| Msa0529420 | Msa0682410 | 0.802276 | 6.056827e-49 | -8.615850e-47 |
| Msa0533510 | Msa0682410 | 0.808574 | 2.896711e-50 | -8.615850e-47 |
| Msa0535570 | Msa0682410 | 0.803744 | 3.012261e-49 | -8.615850e-47 |
| Msa0538440 | Msa0682410 | 0.841998 | 3.381074e-58 | -8.615850e-47 |
| Msa0538450 | Msa0682410 | 0.816850 | 4.470075e-52 | -8.615850e-47 |
| Msa0538520 | Msa0682410 | 0.814825 | 1.264604e-51 | -8.615850e-47 |
| Msa0538530 | Msa0682410 | 0.830778 | 2.424863e-55 | -8.615850e-47 |
| Msa0546750 | Msa0682410 | 0.901730 | 1.993987e-78 | -8.615850e-47 |
| Msa0546760 | Msa0682410 | 0.916399 | 1.867218e-85 | -8.615850e-47 |
| Msa0554660 | Msa0682410 | 0.812334 | 4.466396e-51 | -8.615850e-47 |
| Msa0565930 | Msa0682410 | -0.811804 | 5.828356e-51 | -8.615850e-47 |
| Msa0589720 | Msa0682410 | 0.803424 | 3.509212e-49 | -8.615850e-47 |
| Msa0589740 | Msa0682410 | 0.808723 | 2.692450e-50 | -8.615850e-47 |
| Msa0591490 | Msa0682410 | 0.800580 | 1.347991e-48 | -8.615850e-47 |
| Msa0594330 | Msa0682410 | 0.826072 | 3.315840e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682410 | MtrunA17_Chr4g0028551 | 98.859 | 526 | 6 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1069 |
| Msa0682410 | MtrunA17_Chr4g0028541 | 98.859 | 526 | 6 | 0 | 1 | 526 | 1 | 526 | 0.0 | 1069 |
| Msa0682410 | MtrunA17_Chr8g0368421 | 61.554 | 489 | 186 | 2 | 38 | 524 | 18 | 506 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682410 | AT1G08090.1 | 78.828 | 529 | 109 | 1 | 1 | 526 | 1 | 529 | 0.0 | 881 |
| Msa0682410 | AT5G60770.1 | 79.017 | 529 | 105 | 2 | 1 | 526 | 1 | 526 | 0.0 | 877 |
| Msa0682410 | AT1G08100.1 | 74.855 | 517 | 127 | 2 | 7 | 521 | 6 | 521 | 0.0 | 818 |
| Msa0682410 | AT5G60780.1 | 73.171 | 533 | 135 | 3 | 2 | 526 | 6 | 538 | 0.0 | 794 |
| Msa0682410 | AT3G45060.1 | 72.097 | 534 | 136 | 4 | 5 | 526 | 9 | 541 | 0.0 | 780 |
| Msa0682410 | AT1G12940.1 | 59.259 | 486 | 194 | 2 | 38 | 522 | 20 | 502 | 0.0 | 605 |
| Msa0682410 | AT5G14570.1 | 48.511 | 470 | 220 | 4 | 41 | 493 | 18 | 482 | 1.55e-151 | 443 |
Find 131 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTTATCATGGGTATTT+TGG | 0.143284 | 4_4:+43916101 | Msa0682410:CDS |
| GCCGGAGTCGCTTCGGTTTC+AGG | 0.162646 | 4_4:+43915706 | Msa0682410:CDS |
| TGCTGCTGGTTGGGGTAATA+TGG | 0.200878 | 4_4:+43915969 | Msa0682410:CDS |
| GGAATCATTGCTGCATCTTT+TGG | 0.201038 | 4_4:+43916680 | Msa0682410:CDS |
| ATCAACTGGTAATGCAAATT+TGG | 0.211102 | 4_4:-43915509 | None:intergenic |
| ATGTTTAATAGTAAAATTAT+TGG | 0.217642 | 4_4:+43915931 | Msa0682410:CDS |
| AAAATTATTGGACTTGTAAA+TGG | 0.231743 | 4_4:+43915943 | Msa0682410:CDS |
| ATTCATATCAAGAAGATCTT+TGG | 0.235165 | 4_4:+43916931 | Msa0682410:CDS |
| CATTTGTTTCATGCCAATAT+TGG | 0.240129 | 4_4:+43915899 | Msa0682410:CDS |
| GTTTGCATCAACCAAGTCTT+AGG | 0.268930 | 4_4:+43917206 | Msa0682410:CDS |
| ACTGCTTTATGGTTACTCTA+TGG | 0.275641 | 4_4:+43916376 | Msa0682410:CDS |
| CAACAGCTTCAGGTCTTTCA+TGG | 0.291908 | 4_4:+43917038 | Msa0682410:CDS |
| CGTCGGATTTCGTGAGGTTA+AGG | 0.293043 | 4_4:-43915675 | None:intergenic |
| CACTCAGCTTATTATGCCTT+TGG | 0.295935 | 4_4:+43916002 | Msa0682410:CDS |
| GTTTATGATTGGTTTCTCTT+TGG | 0.307610 | 4_4:+43915873 | Msa0682410:CDS |
| AAATGGTACTGCTGCTGGTT+GGG | 0.317688 | 4_4:+43915960 | Msa0682410:CDS |
| AGATCTTTGGGAATAATATC+AGG | 0.321933 | 4_4:+43916944 | Msa0682410:CDS |
| GGAATAATATCAGGTTTAAC+TGG | 0.331122 | 4_4:+43916953 | Msa0682410:CDS |
| CGCCATTAGTCCCGATTATC+CGG | 0.341621 | 4_4:+43915647 | Msa0682410:CDS |
| TGAAAAGAGTTTGAAAACTT+TGG | 0.345000 | 4_4:-43915545 | None:intergenic |
| GGTGCAATTTGTGACCTATT+AGG | 0.354243 | 4_4:+43915754 | Msa0682410:CDS |
| TCATTTGTTGAAAATGCTTC+TGG | 0.358655 | 4_4:+43915835 | Msa0682410:CDS |
| GATGTAGCAGCAAGATTATT+CGG | 0.362131 | 4_4:+43916746 | Msa0682410:CDS |
| ACATAGTACTCATCCAATAT+TGG | 0.362676 | 4_4:-43915912 | None:intergenic |
| TTAAGGTTGTCCCGGATAAT+CGG | 0.369697 | 4_4:-43915658 | None:intergenic |
| TTCCGGCTGTGTGTAGCTTT+AGG | 0.375698 | 4_4:-43916661 | None:intergenic |
| AGAATGATATCCATGATAAA+TGG | 0.376569 | 4_4:-43915594 | None:intergenic |
| GCAGCATGTGGTGCAACATT+TGG | 0.378132 | 4_4:+43916899 | Msa0682410:CDS |
| CTTCTGGTTATATAGCAGTT+AGG | 0.379548 | 4_4:+43915851 | Msa0682410:CDS |
| TGGTTGGTTGCATGTTATCA+TGG | 0.382144 | 4_4:+43916092 | Msa0682410:CDS |
| GTGCTACTCCTTTCACTGCT+TGG | 0.383160 | 4_4:+43916049 | Msa0682410:CDS |
| TTCATATCAAGAAGATCTTT+GGG | 0.385193 | 4_4:+43916932 | Msa0682410:CDS |
| GCAGGTGGAAACTTTGGTTC+AGG | 0.385832 | 4_4:+43916977 | Msa0682410:CDS |
| TAGTGGGTAGGAGTTGTATT+TGG | 0.393817 | 4_4:-43917286 | None:intergenic |
| GGTTGGGGTAATATGGGTGG+TGG | 0.398747 | 4_4:+43915976 | Msa0682410:CDS |
| AACTTAGTTGCTCGTCCATT+CGG | 0.406657 | 4_4:+43916710 | Msa0682410:CDS |
| AACCATAACGTGGACCTAAT+AGG | 0.411808 | 4_4:-43915768 | None:intergenic |
| ACTCCATGCATGGAGCTTCC+TGG | 0.412777 | 4_4:-43915421 | None:intergenic |
| GCTGCTGGTTGGGGTAATAT+GGG | 0.417787 | 4_4:+43915970 | Msa0682410:CDS |
| AGCTCCATGCATGGAGTCAC+TGG | 0.423974 | 4_4:+43915427 | Msa0682410:CDS |
| GTTGGGGTAATATGGGTGGT+GGG | 0.435234 | 4_4:+43915977 | Msa0682410:CDS |
| ATAGCAGTTAGGTTTATGAT+TGG | 0.436014 | 4_4:+43915862 | Msa0682410:CDS |
| CTGCTTTATGGTTACTCTAT+GGG | 0.436463 | 4_4:+43916377 | Msa0682410:CDS |
| TGGATGGGTGCAATGATTGT+TGG | 0.437054 | 4_4:+43917058 | Msa0682410:CDS |
| TATAACAATGGCTGATATTG+AGG | 0.442270 | 4_4:+43915393 | None:intergenic |
| GGTATGCTATAACAAATTAC+AGG | 0.443291 | 4_4:+43916339 | Msa0682410:CDS |
| AAAGATCTTCTTGATATGAA+TGG | 0.444365 | 4_4:-43916929 | None:intergenic |
| GACCTATTAGGTCCACGTTA+TGG | 0.448846 | 4_4:+43915766 | Msa0682410:CDS |
| AACATTACCCTTCTTCTGTA+AGG | 0.451966 | 4_4:-43916166 | None:intergenic |
| ACTGGTGCAGGTGGAAACTT+TGG | 0.451991 | 4_4:+43916971 | Msa0682410:CDS |
| GGAAAATGAACAAATGCAAC+AGG | 0.456403 | 4_4:-43917091 | None:intergenic |
| TGAGAACCTTCCATTTATCA+TGG | 0.456413 | 4_4:+43915584 | Msa0682410:CDS |
| AAAAGATGCAGCAATGATTC+CGG | 0.462118 | 4_4:-43916678 | None:intergenic |
| AGCTTCAGGTCTTTCATGGA+TGG | 0.465615 | 4_4:+43917042 | Msa0682410:CDS |
| AGAAAACTCCTCCTAGGGTT+TGG | 0.467221 | 4_4:-43916802 | None:intergenic |
| TTGCTGAGTATTTCTATGAC+AGG | 0.469828 | 4_4:+43916426 | Msa0682410:CDS |
| ATATGCAGAAAACTCCTCCT+AGG | 0.470665 | 4_4:-43916808 | None:intergenic |
| AACACTATTACACTTCTGAA+TGG | 0.470788 | 4_4:+43917161 | Msa0682410:CDS |
| TGGTAACGCCGGAGTCGCTT+CGG | 0.471102 | 4_4:+43915699 | Msa0682410:CDS |
| TCCCGGATAATCGGGACTAA+TGG | 0.479682 | 4_4:-43915649 | None:intergenic |
| TAAGGTTGTCCCGGATAATC+GGG | 0.479962 | 4_4:-43915657 | None:intergenic |
| GGTTACCATCAGGTAAATCT+TGG | 0.480850 | 4_4:-43916137 | None:intergenic |
| GCTGATATTGAGGGTTCACC+AGG | 0.480863 | 4_4:+43915403 | Msa0682410:CDS |
| CTTGTAAATGGTACTGCTGC+TGG | 0.488890 | 4_4:+43915955 | Msa0682410:CDS |
| AATGGTACTGCTGCTGGTTG+GGG | 0.493227 | 4_4:+43915961 | Msa0682410:CDS |
| ATATCAGGTTTAACTGGTGC+AGG | 0.496822 | 4_4:+43916959 | Msa0682410:CDS |
| CCTTGGTGCCTTACAGAAGA+AGG | 0.498271 | 4_4:+43916158 | Msa0682410:CDS |
| TCTTCCAGTGACTCCATGCA+TGG | 0.500141 | 4_4:-43915431 | None:intergenic |
| TAAATGGTACTGCTGCTGGT+TGG | 0.504033 | 4_4:+43915959 | Msa0682410:CDS |
| TTGGGGTAATATGGGTGGTG+GGG | 0.507796 | 4_4:+43915978 | Msa0682410:CDS |
| TCGTGAGGTTAAGGTTGTCC+CGG | 0.510541 | 4_4:-43915666 | None:intergenic |
| CTATAACAAATTACAGGACA+TGG | 0.513380 | 4_4:+43916345 | Msa0682410:CDS |
| GTGGTATCAGTTGGAACCAT+TGG | 0.524676 | 4_4:-43915484 | None:intergenic |
| GATTTGTGTTCAGAATCAAC+TGG | 0.525048 | 4_4:-43915523 | None:intergenic |
| TCGGCATGCGAGGAAGGCTA+TGG | 0.535742 | 4_4:+43916765 | Msa0682410:CDS |
| TCAATGATCCTCTTCTCAGT+TGG | 0.538507 | 4_4:+43916869 | Msa0682410:CDS |
| GATTTACCTGATGGTAACCT+TGG | 0.538623 | 4_4:+43916141 | Msa0682410:CDS |
| GATTATTCGGCATGCGAGGA+AGG | 0.544135 | 4_4:+43916759 | Msa0682410:CDS |
| GTCATCAGTTGCTTCACCAA+TGG | 0.548350 | 4_4:+43915468 | Msa0682410:CDS |
| TTCTCAGCAAACCTAAGACT+TGG | 0.549078 | 4_4:-43917217 | None:intergenic |
| GGTTGGTTGCATGTTATCAT+GGG | 0.550695 | 4_4:+43916093 | Msa0682410:CDS |
| GCTTCAGGTCTTTCATGGAT+GGG | 0.552112 | 4_4:+43917043 | Msa0682410:CDS |
| ATAACAATGGCTGATATTGA+GGG | 0.552556 | 4_4:+43915394 | None:intergenic |
| ATGATAACATGCAACCAACC+AGG | 0.556711 | 4_4:-43916090 | None:intergenic |
| AACCTAAAGCTACACACAGC+CGG | 0.558064 | 4_4:+43916659 | Msa0682410:CDS |
| CTTGTGCTCCAACTGAGAAG+AGG | 0.561854 | 4_4:-43916877 | None:intergenic |
| GGCATATAACTTGTACTAGT+GGG | 0.562820 | 4_4:-43917302 | None:intergenic |
| TGGGTAGGAGTTGTATTTGG+TGG | 0.563220 | 4_4:-43917283 | None:intergenic |
| ACCTGAAACCGAAGCGACTC+CGG | 0.567599 | 4_4:-43915707 | None:intergenic |
| TCTGATGCATAACCGCCGAA+TGG | 0.569739 | 4_4:-43916725 | None:intergenic |
| TTAGTTGCTCGTCCATTCGG+CGG | 0.569840 | 4_4:+43916713 | Msa0682410:CDS |
| AATTTGGCTGTGGTATCAGT+TGG | 0.576596 | 4_4:-43915493 | None:intergenic |
| GCAATTCTCCAAGCAGTGAA+AGG | 0.578221 | 4_4:-43916057 | None:intergenic |
| GAGAATAGTCGTTCTGAGAG+AGG | 0.578576 | 4_4:+43917235 | Msa0682410:CDS |
| AATGAAGATGAAGTACAGAA+AGG | 0.578938 | 4_4:+43917184 | Msa0682410:CDS |
| ATCATTGATAGTACTGCGAT+CGG | 0.578966 | 4_4:-43916854 | None:intergenic |
| TTGGTGCTGTTAGCATGATA+AGG | 0.579781 | 4_4:-43915798 | None:intergenic |
| AATGACATACAAAACACTGT+TGG | 0.582355 | 4_4:-43915817 | None:intergenic |
| GCCATTAGTCCCGATTATCC+GGG | 0.583214 | 4_4:+43915648 | Msa0682410:CDS |
| TCACCAGGAAGCTCCATGCA+TGG | 0.586180 | 4_4:+43915418 | Msa0682410:CDS |
| AAATGGAAGGTTCTCATGTG+AGG | 0.586590 | 4_4:-43915577 | None:intergenic |
| CCTTCTTCTGTAAGGCACCA+AGG | 0.586854 | 4_4:-43916158 | None:intergenic |
| TATGAGTTGATTAGAAGAGC+TGG | 0.589543 | 4_4:+43916027 | Msa0682410:CDS |
| AAGGCACCAAGGTTACCATC+AGG | 0.593630 | 4_4:-43916147 | None:intergenic |
| TTAGGCCAAGATTTACCTGA+TGG | 0.597509 | 4_4:+43916132 | Msa0682410:CDS |
| TACCAACGTCGGATTTCGTG+AGG | 0.605986 | 4_4:-43915681 | None:intergenic |
| TCAGGTTTAACTGGTGCAGG+TGG | 0.608725 | 4_4:+43916962 | Msa0682410:CDS |
| TGGATCTTCCAAACCCTAGG+AGG | 0.611729 | 4_4:+43916794 | Msa0682410:CDS |
| TATAACTTGTACTAGTGGGT+AGG | 0.614728 | 4_4:-43917298 | None:intergenic |
| TATGCAGAAAACTCCTCCTA+GGG | 0.614927 | 4_4:-43916807 | None:intergenic |
| AATGGAAGGTTCTCATGTGA+GGG | 0.615898 | 4_4:-43915576 | None:intergenic |
| CTAATCAACTCATACACCAA+AGG | 0.617873 | 4_4:-43916018 | None:intergenic |
| GAGGAAGGCTATGGACACTC+TGG | 0.618172 | 4_4:+43916774 | Msa0682410:CDS |
| TGAAGCAACTGATGACATGA+AGG | 0.627231 | 4_4:-43915461 | None:intergenic |
| GCTGGTTGGGGTAATATGGG+TGG | 0.628336 | 4_4:+43915973 | Msa0682410:CDS |
| TGATATCCATGATAAATGGA+AGG | 0.629428 | 4_4:-43915590 | None:intergenic |
| CTTGGTGCCTTACAGAAGAA+GGG | 0.632453 | 4_4:+43916159 | Msa0682410:CDS |
| GCAAGATTATTCGGCATGCG+AGG | 0.636291 | 4_4:+43916755 | Msa0682410:CDS |
| CTCTGGATCTTCCAAACCCT+AGG | 0.638609 | 4_4:+43916791 | Msa0682410:CDS |
| TGGTAATGCAAATTTGGCTG+TGG | 0.639028 | 4_4:-43915503 | None:intergenic |
| TGATAACATGCAACCAACCA+GGG | 0.648113 | 4_4:-43916089 | None:intergenic |
| AAATCCGACGTTGGTAACGC+CGG | 0.653244 | 4_4:+43915688 | Msa0682410:CDS |
| GTTGGAGCACAAGCAGCATG+TGG | 0.659585 | 4_4:+43916887 | Msa0682410:CDS |
| CTCAGCAATGACATTGTCAG+TGG | 0.659860 | 4_4:-43916411 | None:intergenic |
| TGCTAAAGACAAGTTCACAA+AGG | 0.663793 | 4_4:+43916188 | Msa0682410:CDS |
| TTCTGAGAGAGGAAAGCGTG+TGG | 0.674767 | 4_4:+43917246 | Msa0682410:CDS |
| AACCTCACGAAATCCGACGT+TGG | 0.679989 | 4_4:+43915679 | Msa0682410:CDS |
| AGGAAAGCACAACCATAACG+TGG | 0.709978 | 4_4:-43915778 | None:intergenic |
| CAAAGGCATAATAAGCTGAG+TGG | 0.711499 | 4_4:-43916001 | None:intergenic |
| GACTCCGGCGTTACCAACGT+CGG | 0.726114 | 4_4:-43915692 | None:intergenic |
| AGGAACATGCTACCCCACTG+TGG | 0.730068 | 4_4:-43917112 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTAATAGTAAAATTAT+TGG | + | chr4_4:43915931-43915950 | Msa0682410:CDS | 10.0% |
| !! | ATGTTTAATAGTAAAATTAT+TGG | + | chr4_4:43915931-43915950 | Msa0682410:CDS | 10.0% |
| !!! | CAGATTATAATTTTAAATTG+TGG | - | chr4_4:43916545-43916564 | None:intergenic | 15.0% |
| !!! | CACAATTTAAAATTATAATC+TGG | + | chr4_4:43916543-43916562 | Msa0682410:intron | 15.0% |
| !! | TCTAATGAATTAAATAAAAC+AGG | + | chr4_4:43916633-43916652 | Msa0682410:intron | 15.0% |
| !!! | CAGATTATAATTTTAAATTG+TGG | - | chr4_4:43916545-43916564 | None:intergenic | 15.0% |
| !!! | CACAATTTAAAATTATAATC+TGG | + | chr4_4:43916543-43916562 | Msa0682410:intron | 15.0% |
| !! | TCTAATGAATTAAATAAAAC+AGG | + | chr4_4:43916633-43916652 | Msa0682410:intron | 15.0% |
| !! | AAAATTATTGGACTTGTAAA+TGG | + | chr4_4:43915943-43915962 | Msa0682410:CDS | 20.0% |
| !!! | GATTATGATTTTTTTTCTTC+AGG | + | chr4_4:43916310-43916329 | Msa0682410:intron | 20.0% |
| !!! | ACAAACTTTTTAAAAAACCT+AGG | + | chr4_4:43916575-43916594 | Msa0682410:intron | 20.0% |
| !! | AAAATTATTGGACTTGTAAA+TGG | + | chr4_4:43915943-43915962 | Msa0682410:CDS | 20.0% |
| !!! | GATTATGATTTTTTTTCTTC+AGG | + | chr4_4:43916310-43916329 | Msa0682410:intron | 20.0% |
| !!! | ACAAACTTTTTAAAAAACCT+AGG | + | chr4_4:43916575-43916594 | Msa0682410:intron | 20.0% |
| ! | TGAAAAGAGTTTGAAAACTT+TGG | - | chr4_4:43915548-43915567 | None:intergenic | 25.0% |
| !! | AGTTTTCAAACTCTTTTCAA+TGG | + | chr4_4:43915549-43915568 | Msa0682410:CDS | 25.0% |
| ! | AGAATGATATCCATGATAAA+TGG | - | chr4_4:43915597-43915616 | None:intergenic | 25.0% |
| ! | CTAGTTAGTCACTTAATTTA+AGG | + | chr4_4:43916218-43916237 | Msa0682410:intron | 25.0% |
| !!! | CTCATTGATTAATTGTTTTG+TGG | - | chr4_4:43916253-43916272 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTCAGGTTTTG+TGG | + | chr4_4:43916318-43916337 | Msa0682410:intron | 25.0% |
| ! | GTAGATATATACAAATCTTG+AGG | - | chr4_4:43916486-43916505 | None:intergenic | 25.0% |
| ! | AAAGATCTTCTTGATATGAA+TGG | - | chr4_4:43916932-43916951 | None:intergenic | 25.0% |
| ! | ATTCATATCAAGAAGATCTT+TGG | + | chr4_4:43916931-43916950 | Msa0682410:CDS | 25.0% |
| ! | TTCATATCAAGAAGATCTTT+GGG | + | chr4_4:43916932-43916951 | Msa0682410:CDS | 25.0% |
| ! | TGAAAAGAGTTTGAAAACTT+TGG | - | chr4_4:43915548-43915567 | None:intergenic | 25.0% |
| !! | AGTTTTCAAACTCTTTTCAA+TGG | + | chr4_4:43915549-43915568 | Msa0682410:CDS | 25.0% |
| ! | AGAATGATATCCATGATAAA+TGG | - | chr4_4:43915597-43915616 | None:intergenic | 25.0% |
| ! | CTAGTTAGTCACTTAATTTA+AGG | + | chr4_4:43916218-43916237 | Msa0682410:intron | 25.0% |
| !!! | CTCATTGATTAATTGTTTTG+TGG | - | chr4_4:43916253-43916272 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTCAGGTTTTG+TGG | + | chr4_4:43916318-43916337 | Msa0682410:intron | 25.0% |
| ! | GTAGATATATACAAATCTTG+AGG | - | chr4_4:43916486-43916505 | None:intergenic | 25.0% |
| ! | AAAGATCTTCTTGATATGAA+TGG | - | chr4_4:43916932-43916951 | None:intergenic | 25.0% |
| ! | ATTCATATCAAGAAGATCTT+TGG | + | chr4_4:43916931-43916950 | Msa0682410:CDS | 25.0% |
| ! | TTCATATCAAGAAGATCTTT+GGG | + | chr4_4:43916932-43916951 | Msa0682410:CDS | 25.0% |
| ! | ATCAACTGGTAATGCAAATT+TGG | - | chr4_4:43915512-43915531 | None:intergenic | 30.0% |
| TGATATCCATGATAAATGGA+AGG | - | chr4_4:43915593-43915612 | None:intergenic | 30.0% | |
| !! | TTTCAGGTAGTATTTTCTCA+AGG | + | chr4_4:43915722-43915741 | Msa0682410:CDS | 30.0% |
| AATGACATACAAAACACTGT+TGG | - | chr4_4:43915820-43915839 | None:intergenic | 30.0% | |
| ! | TCATTTGTTGAAAATGCTTC+TGG | + | chr4_4:43915835-43915854 | Msa0682410:CDS | 30.0% |
| ATAGCAGTTAGGTTTATGAT+TGG | + | chr4_4:43915862-43915881 | Msa0682410:CDS | 30.0% | |
| !! | GTTTATGATTGGTTTCTCTT+TGG | + | chr4_4:43915873-43915892 | Msa0682410:CDS | 30.0% |
| CATTTGTTTCATGCCAATAT+TGG | + | chr4_4:43915899-43915918 | Msa0682410:CDS | 30.0% | |
| ACATAGTACTCATCCAATAT+TGG | - | chr4_4:43915915-43915934 | None:intergenic | 30.0% | |
| !!! | GGTATTTTGGTCTTAACATT+AGG | + | chr4_4:43916114-43916133 | Msa0682410:CDS | 30.0% |
| GGTATGCTATAACAAATTAC+AGG | + | chr4_4:43916339-43916358 | Msa0682410:CDS | 30.0% | |
| CTATAACAAATTACAGGACA+TGG | + | chr4_4:43916345-43916364 | Msa0682410:CDS | 30.0% | |
| !! | AAAATTTGTTAGAGTCTCCT+AGG | - | chr4_4:43916595-43916614 | None:intergenic | 30.0% |
| ! | AGATCTTTGGGAATAATATC+AGG | + | chr4_4:43916944-43916963 | Msa0682410:CDS | 30.0% |
| GGAATAATATCAGGTTTAAC+TGG | + | chr4_4:43916953-43916972 | Msa0682410:CDS | 30.0% | |
| ! | TCAAAATTTTCAACAGCTTC+AGG | + | chr4_4:43917028-43917047 | Msa0682410:CDS | 30.0% |
| ! | ATTTGTTCATTTTCCACAGT+GGG | + | chr4_4:43917099-43917118 | Msa0682410:CDS | 30.0% |
| ! | TCTTCATTGATCTCTTTTGA+AGG | - | chr4_4:43917142-43917161 | None:intergenic | 30.0% |
| AACACTATTACACTTCTGAA+TGG | + | chr4_4:43917161-43917180 | Msa0682410:CDS | 30.0% | |
| AATGAAGATGAAGTACAGAA+AGG | + | chr4_4:43917184-43917203 | Msa0682410:CDS | 30.0% | |
| ! | ATCAACTGGTAATGCAAATT+TGG | - | chr4_4:43915512-43915531 | None:intergenic | 30.0% |
| TGATATCCATGATAAATGGA+AGG | - | chr4_4:43915593-43915612 | None:intergenic | 30.0% | |
| !! | TTTCAGGTAGTATTTTCTCA+AGG | + | chr4_4:43915722-43915741 | Msa0682410:CDS | 30.0% |
| AATGACATACAAAACACTGT+TGG | - | chr4_4:43915820-43915839 | None:intergenic | 30.0% | |
| ! | TCATTTGTTGAAAATGCTTC+TGG | + | chr4_4:43915835-43915854 | Msa0682410:CDS | 30.0% |
| ATAGCAGTTAGGTTTATGAT+TGG | + | chr4_4:43915862-43915881 | Msa0682410:CDS | 30.0% | |
| !! | GTTTATGATTGGTTTCTCTT+TGG | + | chr4_4:43915873-43915892 | Msa0682410:CDS | 30.0% |
| CATTTGTTTCATGCCAATAT+TGG | + | chr4_4:43915899-43915918 | Msa0682410:CDS | 30.0% | |
| ACATAGTACTCATCCAATAT+TGG | - | chr4_4:43915915-43915934 | None:intergenic | 30.0% | |
| !!! | GGTATTTTGGTCTTAACATT+AGG | + | chr4_4:43916114-43916133 | Msa0682410:CDS | 30.0% |
| GGTATGCTATAACAAATTAC+AGG | + | chr4_4:43916339-43916358 | Msa0682410:CDS | 30.0% | |
| CTATAACAAATTACAGGACA+TGG | + | chr4_4:43916345-43916364 | Msa0682410:CDS | 30.0% | |
| !! | AAAATTTGTTAGAGTCTCCT+AGG | - | chr4_4:43916595-43916614 | None:intergenic | 30.0% |
| ! | AGATCTTTGGGAATAATATC+AGG | + | chr4_4:43916944-43916963 | Msa0682410:CDS | 30.0% |
| GGAATAATATCAGGTTTAAC+TGG | + | chr4_4:43916953-43916972 | Msa0682410:CDS | 30.0% | |
| ! | TCAAAATTTTCAACAGCTTC+AGG | + | chr4_4:43917028-43917047 | Msa0682410:CDS | 30.0% |
| ! | ATTTGTTCATTTTCCACAGT+GGG | + | chr4_4:43917099-43917118 | Msa0682410:CDS | 30.0% |
| ! | TCTTCATTGATCTCTTTTGA+AGG | - | chr4_4:43917142-43917161 | None:intergenic | 30.0% |
| AACACTATTACACTTCTGAA+TGG | + | chr4_4:43917161-43917180 | Msa0682410:CDS | 30.0% | |
| AATGAAGATGAAGTACAGAA+AGG | + | chr4_4:43917184-43917203 | Msa0682410:CDS | 30.0% | |
| GATTTGTGTTCAGAATCAAC+TGG | - | chr4_4:43915526-43915545 | None:intergenic | 35.0% | |
| TGAGAACCTTCCATTTATCA+TGG | + | chr4_4:43915584-43915603 | Msa0682410:CDS | 35.0% | |
| ! | TATTTTCTCAAGGCTTGCAA+TGG | + | chr4_4:43915732-43915751 | Msa0682410:CDS | 35.0% |
| ! | ATTTTCTCAAGGCTTGCAAT+GGG | + | chr4_4:43915733-43915752 | Msa0682410:CDS | 35.0% |
| ! | CTTCTGGTTATATAGCAGTT+AGG | + | chr4_4:43915851-43915870 | Msa0682410:CDS | 35.0% |
| CTAATCAACTCATACACCAA+AGG | - | chr4_4:43916021-43916040 | None:intergenic | 35.0% | |
| !! | TATGAGTTGATTAGAAGAGC+TGG | + | chr4_4:43916027-43916046 | Msa0682410:CDS | 35.0% |
| !!! | AGAATTGCCTTTTTTATCCC+TGG | + | chr4_4:43916072-43916091 | Msa0682410:CDS | 35.0% |
| ! | GCATGTTATCATGGGTATTT+TGG | + | chr4_4:43916101-43916120 | Msa0682410:CDS | 35.0% |
| AACATTACCCTTCTTCTGTA+AGG | - | chr4_4:43916169-43916188 | None:intergenic | 35.0% | |
| TGCTAAAGACAAGTTCACAA+AGG | + | chr4_4:43916188-43916207 | Msa0682410:CDS | 35.0% | |
| ! | TGGATTTTTGCACTGCTTTA+TGG | + | chr4_4:43916365-43916384 | Msa0682410:CDS | 35.0% |
| ACTGCTTTATGGTTACTCTA+TGG | + | chr4_4:43916376-43916395 | Msa0682410:CDS | 35.0% | |
| CTGCTTTATGGTTACTCTAT+GGG | + | chr4_4:43916377-43916396 | Msa0682410:CDS | 35.0% | |
| ! | TTGCTGAGTATTTCTATGAC+AGG | + | chr4_4:43916426-43916445 | Msa0682410:CDS | 35.0% |
| TTAAATTTCCACTGCAGTTG+CGG | + | chr4_4:43916518-43916537 | Msa0682410:intron | 35.0% | |
| AAAAGATGCAGCAATGATTC+CGG | - | chr4_4:43916681-43916700 | None:intergenic | 35.0% | |
| GATGTAGCAGCAAGATTATT+CGG | + | chr4_4:43916746-43916765 | Msa0682410:CDS | 35.0% | |
| ! | ATCATTGATAGTACTGCGAT+CGG | - | chr4_4:43916857-43916876 | None:intergenic | 35.0% |
| GGAAAATGAACAAATGCAAC+AGG | - | chr4_4:43917094-43917113 | None:intergenic | 35.0% | |
| ! | CATTTGTTCATTTTCCACAG+TGG | + | chr4_4:43917098-43917117 | Msa0682410:CDS | 35.0% |
| ! | TTTGTTCATTTTCCACAGTG+GGG | + | chr4_4:43917100-43917119 | Msa0682410:CDS | 35.0% |
| !! | TCATTGATCTCTTTTGAAGG+TGG | - | chr4_4:43917139-43917158 | None:intergenic | 35.0% |
| GATTTGTGTTCAGAATCAAC+TGG | - | chr4_4:43915526-43915545 | None:intergenic | 35.0% | |
| TGAGAACCTTCCATTTATCA+TGG | + | chr4_4:43915584-43915603 | Msa0682410:CDS | 35.0% | |
| ! | TATTTTCTCAAGGCTTGCAA+TGG | + | chr4_4:43915732-43915751 | Msa0682410:CDS | 35.0% |
| ! | ATTTTCTCAAGGCTTGCAAT+GGG | + | chr4_4:43915733-43915752 | Msa0682410:CDS | 35.0% |
| ! | CTTCTGGTTATATAGCAGTT+AGG | + | chr4_4:43915851-43915870 | Msa0682410:CDS | 35.0% |
| CTAATCAACTCATACACCAA+AGG | - | chr4_4:43916021-43916040 | None:intergenic | 35.0% | |
| !! | TATGAGTTGATTAGAAGAGC+TGG | + | chr4_4:43916027-43916046 | Msa0682410:CDS | 35.0% |
| !!! | AGAATTGCCTTTTTTATCCC+TGG | + | chr4_4:43916072-43916091 | Msa0682410:CDS | 35.0% |
| ! | GCATGTTATCATGGGTATTT+TGG | + | chr4_4:43916101-43916120 | Msa0682410:CDS | 35.0% |
| AACATTACCCTTCTTCTGTA+AGG | - | chr4_4:43916169-43916188 | None:intergenic | 35.0% | |
| TGCTAAAGACAAGTTCACAA+AGG | + | chr4_4:43916188-43916207 | Msa0682410:CDS | 35.0% | |
| ! | TGGATTTTTGCACTGCTTTA+TGG | + | chr4_4:43916365-43916384 | Msa0682410:CDS | 35.0% |
| ACTGCTTTATGGTTACTCTA+TGG | + | chr4_4:43916376-43916395 | Msa0682410:CDS | 35.0% | |
| CTGCTTTATGGTTACTCTAT+GGG | + | chr4_4:43916377-43916396 | Msa0682410:CDS | 35.0% | |
| ! | TTGCTGAGTATTTCTATGAC+AGG | + | chr4_4:43916426-43916445 | Msa0682410:CDS | 35.0% |
| TTAAATTTCCACTGCAGTTG+CGG | + | chr4_4:43916518-43916537 | Msa0682410:intron | 35.0% | |
| AAAAGATGCAGCAATGATTC+CGG | - | chr4_4:43916681-43916700 | None:intergenic | 35.0% | |
| GATGTAGCAGCAAGATTATT+CGG | + | chr4_4:43916746-43916765 | Msa0682410:CDS | 35.0% | |
| ! | ATCATTGATAGTACTGCGAT+CGG | - | chr4_4:43916857-43916876 | None:intergenic | 35.0% |
| GGAAAATGAACAAATGCAAC+AGG | - | chr4_4:43917094-43917113 | None:intergenic | 35.0% | |
| ! | CATTTGTTCATTTTCCACAG+TGG | + | chr4_4:43917098-43917117 | Msa0682410:CDS | 35.0% |
| ! | TTTGTTCATTTTCCACAGTG+GGG | + | chr4_4:43917100-43917119 | Msa0682410:CDS | 35.0% |
| !! | TCATTGATCTCTTTTGAAGG+TGG | - | chr4_4:43917139-43917158 | None:intergenic | 35.0% |
| TGAAGCAACTGATGACATGA+AGG | - | chr4_4:43915464-43915483 | None:intergenic | 40.0% | |
| AATTTGGCTGTGGTATCAGT+TGG | - | chr4_4:43915496-43915515 | None:intergenic | 40.0% | |
| ! | TGGTAATGCAAATTTGGCTG+TGG | - | chr4_4:43915506-43915525 | None:intergenic | 40.0% |
| AATGGAAGGTTCTCATGTGA+GGG | - | chr4_4:43915579-43915598 | None:intergenic | 40.0% | |
| AAATGGAAGGTTCTCATGTG+AGG | - | chr4_4:43915580-43915599 | None:intergenic | 40.0% | |
| TTAAGGTTGTCCCGGATAAT+CGG | - | chr4_4:43915661-43915680 | None:intergenic | 40.0% | |
| GGTGCAATTTGTGACCTATT+AGG | + | chr4_4:43915754-43915773 | Msa0682410:CDS | 40.0% | |
| AACCATAACGTGGACCTAAT+AGG | - | chr4_4:43915771-43915790 | None:intergenic | 40.0% | |
| !! | TTGGTGCTGTTAGCATGATA+AGG | - | chr4_4:43915801-43915820 | None:intergenic | 40.0% |
| ! | CAAAGGCATAATAAGCTGAG+TGG | - | chr4_4:43916004-43916023 | None:intergenic | 40.0% |
| CACTCAGCTTATTATGCCTT+TGG | + | chr4_4:43916002-43916021 | Msa0682410:CDS | 40.0% | |
| !!! | TTGCCTTTTTTATCCCTGGT+TGG | + | chr4_4:43916076-43916095 | Msa0682410:CDS | 40.0% |
| CAACCAACCAGGGATAAAAA+AGG | - | chr4_4:43916082-43916101 | None:intergenic | 40.0% | |
| TGATAACATGCAACCAACCA+GGG | - | chr4_4:43916092-43916111 | None:intergenic | 40.0% | |
| ATGATAACATGCAACCAACC+AGG | - | chr4_4:43916093-43916112 | None:intergenic | 40.0% | |
| ! | TGGTTGGTTGCATGTTATCA+TGG | + | chr4_4:43916092-43916111 | Msa0682410:CDS | 40.0% |
| ! | GGTTGGTTGCATGTTATCAT+GGG | + | chr4_4:43916093-43916112 | Msa0682410:CDS | 40.0% |
| TTAGGCCAAGATTTACCTGA+TGG | + | chr4_4:43916132-43916151 | Msa0682410:CDS | 40.0% | |
| GGTTACCATCAGGTAAATCT+TGG | - | chr4_4:43916140-43916159 | None:intergenic | 40.0% | |
| GATTTACCTGATGGTAACCT+TGG | + | chr4_4:43916141-43916160 | Msa0682410:CDS | 40.0% | |
| ! | GGAATCATTGCTGCATCTTT+TGG | + | chr4_4:43916680-43916699 | Msa0682410:CDS | 40.0% |
| !! | CATTGCTGCATCTTTTGGAA+TGG | + | chr4_4:43916685-43916704 | Msa0682410:CDS | 40.0% |
| AACTTAGTTGCTCGTCCATT+CGG | + | chr4_4:43916710-43916729 | Msa0682410:CDS | 40.0% | |
| TATGCAGAAAACTCCTCCTA+GGG | - | chr4_4:43916810-43916829 | None:intergenic | 40.0% | |
| ATATGCAGAAAACTCCTCCT+AGG | - | chr4_4:43916811-43916830 | None:intergenic | 40.0% | |
| ! | TAGGAGGAGTTTTCTGCATA+TGG | + | chr4_4:43916810-43916829 | Msa0682410:CDS | 40.0% |
| ! | GGAGTTTTCTGCATATGGTT+AGG | + | chr4_4:43916815-43916834 | Msa0682410:CDS | 40.0% |
| TCAATGATCCTCTTCTCAGT+TGG | + | chr4_4:43916869-43916888 | Msa0682410:CDS | 40.0% | |
| ATATCAGGTTTAACTGGTGC+AGG | + | chr4_4:43916959-43916978 | Msa0682410:CDS | 40.0% | |
| !! | TGATCTCTTTTGAAGGTGGA+AGG | - | chr4_4:43917135-43917154 | None:intergenic | 40.0% |
| GTTTGCATCAACCAAGTCTT+AGG | + | chr4_4:43917206-43917225 | Msa0682410:CDS | 40.0% | |
| TTCTCAGCAAACCTAAGACT+TGG | - | chr4_4:43917220-43917239 | None:intergenic | 40.0% | |
| ! | TAGTGGGTAGGAGTTGTATT+TGG | - | chr4_4:43917289-43917308 | None:intergenic | 40.0% |
| TGAAGCAACTGATGACATGA+AGG | - | chr4_4:43915464-43915483 | None:intergenic | 40.0% | |
| AATTTGGCTGTGGTATCAGT+TGG | - | chr4_4:43915496-43915515 | None:intergenic | 40.0% | |
| ! | TGGTAATGCAAATTTGGCTG+TGG | - | chr4_4:43915506-43915525 | None:intergenic | 40.0% |
| AATGGAAGGTTCTCATGTGA+GGG | - | chr4_4:43915579-43915598 | None:intergenic | 40.0% | |
| AAATGGAAGGTTCTCATGTG+AGG | - | chr4_4:43915580-43915599 | None:intergenic | 40.0% | |
| TTAAGGTTGTCCCGGATAAT+CGG | - | chr4_4:43915661-43915680 | None:intergenic | 40.0% | |
| GGTGCAATTTGTGACCTATT+AGG | + | chr4_4:43915754-43915773 | Msa0682410:CDS | 40.0% | |
| AACCATAACGTGGACCTAAT+AGG | - | chr4_4:43915771-43915790 | None:intergenic | 40.0% | |
| !! | TTGGTGCTGTTAGCATGATA+AGG | - | chr4_4:43915801-43915820 | None:intergenic | 40.0% |
| ! | CAAAGGCATAATAAGCTGAG+TGG | - | chr4_4:43916004-43916023 | None:intergenic | 40.0% |
| CACTCAGCTTATTATGCCTT+TGG | + | chr4_4:43916002-43916021 | Msa0682410:CDS | 40.0% | |
| !!! | TTGCCTTTTTTATCCCTGGT+TGG | + | chr4_4:43916076-43916095 | Msa0682410:CDS | 40.0% |
| CAACCAACCAGGGATAAAAA+AGG | - | chr4_4:43916082-43916101 | None:intergenic | 40.0% | |
| TGATAACATGCAACCAACCA+GGG | - | chr4_4:43916092-43916111 | None:intergenic | 40.0% | |
| ATGATAACATGCAACCAACC+AGG | - | chr4_4:43916093-43916112 | None:intergenic | 40.0% | |
| ! | TGGTTGGTTGCATGTTATCA+TGG | + | chr4_4:43916092-43916111 | Msa0682410:CDS | 40.0% |
| ! | GGTTGGTTGCATGTTATCAT+GGG | + | chr4_4:43916093-43916112 | Msa0682410:CDS | 40.0% |
| TTAGGCCAAGATTTACCTGA+TGG | + | chr4_4:43916132-43916151 | Msa0682410:CDS | 40.0% | |
| GGTTACCATCAGGTAAATCT+TGG | - | chr4_4:43916140-43916159 | None:intergenic | 40.0% | |
| GATTTACCTGATGGTAACCT+TGG | + | chr4_4:43916141-43916160 | Msa0682410:CDS | 40.0% | |
| ! | GGAATCATTGCTGCATCTTT+TGG | + | chr4_4:43916680-43916699 | Msa0682410:CDS | 40.0% |
| !! | CATTGCTGCATCTTTTGGAA+TGG | + | chr4_4:43916685-43916704 | Msa0682410:CDS | 40.0% |
| AACTTAGTTGCTCGTCCATT+CGG | + | chr4_4:43916710-43916729 | Msa0682410:CDS | 40.0% | |
| TATGCAGAAAACTCCTCCTA+GGG | - | chr4_4:43916810-43916829 | None:intergenic | 40.0% | |
| ATATGCAGAAAACTCCTCCT+AGG | - | chr4_4:43916811-43916830 | None:intergenic | 40.0% | |
| ! | TAGGAGGAGTTTTCTGCATA+TGG | + | chr4_4:43916810-43916829 | Msa0682410:CDS | 40.0% |
| ! | GGAGTTTTCTGCATATGGTT+AGG | + | chr4_4:43916815-43916834 | Msa0682410:CDS | 40.0% |
| TCAATGATCCTCTTCTCAGT+TGG | + | chr4_4:43916869-43916888 | Msa0682410:CDS | 40.0% | |
| ATATCAGGTTTAACTGGTGC+AGG | + | chr4_4:43916959-43916978 | Msa0682410:CDS | 40.0% | |
| !! | TGATCTCTTTTGAAGGTGGA+AGG | - | chr4_4:43917135-43917154 | None:intergenic | 40.0% |
| GTTTGCATCAACCAAGTCTT+AGG | + | chr4_4:43917206-43917225 | Msa0682410:CDS | 40.0% | |
| TTCTCAGCAAACCTAAGACT+TGG | - | chr4_4:43917220-43917239 | None:intergenic | 40.0% | |
| ! | TAGTGGGTAGGAGTTGTATT+TGG | - | chr4_4:43917289-43917308 | None:intergenic | 40.0% |
| GTCATCAGTTGCTTCACCAA+TGG | + | chr4_4:43915468-43915487 | Msa0682410:CDS | 45.0% | |
| GTGGTATCAGTTGGAACCAT+TGG | - | chr4_4:43915487-43915506 | None:intergenic | 45.0% | |
| TAAGGTTGTCCCGGATAATC+GGG | - | chr4_4:43915660-43915679 | None:intergenic | 45.0% | |
| GACCTATTAGGTCCACGTTA+TGG | + | chr4_4:43915766-43915785 | Msa0682410:CDS | 45.0% | |
| ! | AGGAAAGCACAACCATAACG+TGG | - | chr4_4:43915781-43915800 | None:intergenic | 45.0% |
| CTTGTAAATGGTACTGCTGC+TGG | + | chr4_4:43915955-43915974 | Msa0682410:CDS | 45.0% | |
| TAAATGGTACTGCTGCTGGT+TGG | + | chr4_4:43915959-43915978 | Msa0682410:CDS | 45.0% | |
| ! | AAATGGTACTGCTGCTGGTT+GGG | + | chr4_4:43915960-43915979 | Msa0682410:CDS | 45.0% |
| GCAATTCTCCAAGCAGTGAA+AGG | - | chr4_4:43916060-43916079 | None:intergenic | 45.0% | |
| !! | CTTGGTGCCTTACAGAAGAA+GGG | + | chr4_4:43916159-43916178 | Msa0682410:CDS | 45.0% |
| CTCAGCAATGACATTGTCAG+TGG | - | chr4_4:43916414-43916433 | None:intergenic | 45.0% | |
| AACCTAAAGCTACACACAGC+CGG | + | chr4_4:43916659-43916678 | Msa0682410:CDS | 45.0% | |
| AGAAAACTCCTCCTAGGGTT+TGG | - | chr4_4:43916805-43916824 | None:intergenic | 45.0% | |
| CAACAGCTTCAGGTCTTTCA+TGG | + | chr4_4:43917038-43917057 | Msa0682410:CDS | 45.0% | |
| AGCTTCAGGTCTTTCATGGA+TGG | + | chr4_4:43917042-43917061 | Msa0682410:CDS | 45.0% | |
| GCTTCAGGTCTTTCATGGAT+GGG | + | chr4_4:43917043-43917062 | Msa0682410:CDS | 45.0% | |
| TGGATGGGTGCAATGATTGT+TGG | + | chr4_4:43917058-43917077 | Msa0682410:CDS | 45.0% | |
| !! | GAGAATAGTCGTTCTGAGAG+AGG | + | chr4_4:43917235-43917254 | Msa0682410:CDS | 45.0% |
| TGGGTAGGAGTTGTATTTGG+TGG | - | chr4_4:43917286-43917305 | None:intergenic | 45.0% | |
| GTCATCAGTTGCTTCACCAA+TGG | + | chr4_4:43915468-43915487 | Msa0682410:CDS | 45.0% | |
| GTGGTATCAGTTGGAACCAT+TGG | - | chr4_4:43915487-43915506 | None:intergenic | 45.0% | |
| TAAGGTTGTCCCGGATAATC+GGG | - | chr4_4:43915660-43915679 | None:intergenic | 45.0% | |
| GACCTATTAGGTCCACGTTA+TGG | + | chr4_4:43915766-43915785 | Msa0682410:CDS | 45.0% | |
| ! | AGGAAAGCACAACCATAACG+TGG | - | chr4_4:43915781-43915800 | None:intergenic | 45.0% |
| CTTGTAAATGGTACTGCTGC+TGG | + | chr4_4:43915955-43915974 | Msa0682410:CDS | 45.0% | |
| TAAATGGTACTGCTGCTGGT+TGG | + | chr4_4:43915959-43915978 | Msa0682410:CDS | 45.0% | |
| ! | AAATGGTACTGCTGCTGGTT+GGG | + | chr4_4:43915960-43915979 | Msa0682410:CDS | 45.0% |
| GCAATTCTCCAAGCAGTGAA+AGG | - | chr4_4:43916060-43916079 | None:intergenic | 45.0% | |
| !! | CTTGGTGCCTTACAGAAGAA+GGG | + | chr4_4:43916159-43916178 | Msa0682410:CDS | 45.0% |
| CTCAGCAATGACATTGTCAG+TGG | - | chr4_4:43916414-43916433 | None:intergenic | 45.0% | |
| AACCTAAAGCTACACACAGC+CGG | + | chr4_4:43916659-43916678 | Msa0682410:CDS | 45.0% | |
| AGAAAACTCCTCCTAGGGTT+TGG | - | chr4_4:43916805-43916824 | None:intergenic | 45.0% | |
| CAACAGCTTCAGGTCTTTCA+TGG | + | chr4_4:43917038-43917057 | Msa0682410:CDS | 45.0% | |
| AGCTTCAGGTCTTTCATGGA+TGG | + | chr4_4:43917042-43917061 | Msa0682410:CDS | 45.0% | |
| GCTTCAGGTCTTTCATGGAT+GGG | + | chr4_4:43917043-43917062 | Msa0682410:CDS | 45.0% | |
| TGGATGGGTGCAATGATTGT+TGG | + | chr4_4:43917058-43917077 | Msa0682410:CDS | 45.0% | |
| !! | GAGAATAGTCGTTCTGAGAG+AGG | + | chr4_4:43917235-43917254 | Msa0682410:CDS | 45.0% |
| TGGGTAGGAGTTGTATTTGG+TGG | - | chr4_4:43917286-43917305 | None:intergenic | 45.0% | |
| GCTGATATTGAGGGTTCACC+AGG | + | chr4_4:43915403-43915422 | Msa0682410:CDS | 50.0% | |
| TCTTCCAGTGACTCCATGCA+TGG | - | chr4_4:43915434-43915453 | None:intergenic | 50.0% | |
| CGCCATTAGTCCCGATTATC+CGG | + | chr4_4:43915647-43915666 | Msa0682410:CDS | 50.0% | |
| GCCATTAGTCCCGATTATCC+GGG | + | chr4_4:43915648-43915667 | Msa0682410:CDS | 50.0% | |
| TCCCGGATAATCGGGACTAA+TGG | - | chr4_4:43915652-43915671 | None:intergenic | 50.0% | |
| TCGTGAGGTTAAGGTTGTCC+CGG | - | chr4_4:43915669-43915688 | None:intergenic | 50.0% | |
| CGTCGGATTTCGTGAGGTTA+AGG | - | chr4_4:43915678-43915697 | None:intergenic | 50.0% | |
| AACCTCACGAAATCCGACGT+TGG | + | chr4_4:43915679-43915698 | Msa0682410:CDS | 50.0% | |
| TACCAACGTCGGATTTCGTG+AGG | - | chr4_4:43915684-43915703 | None:intergenic | 50.0% | |
| !! | AAATCCGACGTTGGTAACGC+CGG | + | chr4_4:43915688-43915707 | Msa0682410:CDS | 50.0% |
| ! | AATGGTACTGCTGCTGGTTG+GGG | + | chr4_4:43915961-43915980 | Msa0682410:CDS | 50.0% |
| ! | TGCTGCTGGTTGGGGTAATA+TGG | + | chr4_4:43915969-43915988 | Msa0682410:CDS | 50.0% |
| ! | GCTGCTGGTTGGGGTAATAT+GGG | + | chr4_4:43915970-43915989 | Msa0682410:CDS | 50.0% |
| GTTGGGGTAATATGGGTGGT+GGG | + | chr4_4:43915977-43915996 | Msa0682410:CDS | 50.0% | |
| TTGGGGTAATATGGGTGGTG+GGG | + | chr4_4:43915978-43915997 | Msa0682410:CDS | 50.0% | |
| ! | GTGCTACTCCTTTCACTGCT+TGG | + | chr4_4:43916049-43916068 | Msa0682410:CDS | 50.0% |
| ! | AAGGCACCAAGGTTACCATC+AGG | - | chr4_4:43916150-43916169 | None:intergenic | 50.0% |
| ! | CCTTCTTCTGTAAGGCACCA+AGG | - | chr4_4:43916161-43916180 | None:intergenic | 50.0% |
| !! | CCTTGGTGCCTTACAGAAGA+AGG | + | chr4_4:43916158-43916177 | Msa0682410:CDS | 50.0% |
| TTCCGGCTGTGTGTAGCTTT+AGG | - | chr4_4:43916664-43916683 | None:intergenic | 50.0% | |
| TTAGTTGCTCGTCCATTCGG+CGG | + | chr4_4:43916713-43916732 | Msa0682410:CDS | 50.0% | |
| TCTGATGCATAACCGCCGAA+TGG | - | chr4_4:43916728-43916747 | None:intergenic | 50.0% | |
| GCAAGATTATTCGGCATGCG+AGG | + | chr4_4:43916755-43916774 | Msa0682410:CDS | 50.0% | |
| GATTATTCGGCATGCGAGGA+AGG | + | chr4_4:43916759-43916778 | Msa0682410:CDS | 50.0% | |
| CTCTGGATCTTCCAAACCCT+AGG | + | chr4_4:43916791-43916810 | Msa0682410:CDS | 50.0% | |
| TGGATCTTCCAAACCCTAGG+AGG | + | chr4_4:43916794-43916813 | Msa0682410:CDS | 50.0% | |
| CTTGTGCTCCAACTGAGAAG+AGG | - | chr4_4:43916880-43916899 | None:intergenic | 50.0% | |
| GCAGCATGTGGTGCAACATT+TGG | + | chr4_4:43916899-43916918 | Msa0682410:CDS | 50.0% | |
| TCAGGTTTAACTGGTGCAGG+TGG | + | chr4_4:43916962-43916981 | Msa0682410:CDS | 50.0% | |
| ACTGGTGCAGGTGGAAACTT+TGG | + | chr4_4:43916971-43916990 | Msa0682410:CDS | 50.0% | |
| ! | GCAGGTGGAAACTTTGGTTC+AGG | + | chr4_4:43916977-43916996 | Msa0682410:CDS | 50.0% |
| ! | TTCTGAGAGAGGAAAGCGTG+TGG | + | chr4_4:43917246-43917265 | Msa0682410:CDS | 50.0% |
| GCTGATATTGAGGGTTCACC+AGG | + | chr4_4:43915403-43915422 | Msa0682410:CDS | 50.0% | |
| TCTTCCAGTGACTCCATGCA+TGG | - | chr4_4:43915434-43915453 | None:intergenic | 50.0% | |
| CGCCATTAGTCCCGATTATC+CGG | + | chr4_4:43915647-43915666 | Msa0682410:CDS | 50.0% | |
| GCCATTAGTCCCGATTATCC+GGG | + | chr4_4:43915648-43915667 | Msa0682410:CDS | 50.0% | |
| TCCCGGATAATCGGGACTAA+TGG | - | chr4_4:43915652-43915671 | None:intergenic | 50.0% | |
| TCGTGAGGTTAAGGTTGTCC+CGG | - | chr4_4:43915669-43915688 | None:intergenic | 50.0% | |
| CGTCGGATTTCGTGAGGTTA+AGG | - | chr4_4:43915678-43915697 | None:intergenic | 50.0% | |
| AACCTCACGAAATCCGACGT+TGG | + | chr4_4:43915679-43915698 | Msa0682410:CDS | 50.0% | |
| TACCAACGTCGGATTTCGTG+AGG | - | chr4_4:43915684-43915703 | None:intergenic | 50.0% | |
| !! | AAATCCGACGTTGGTAACGC+CGG | + | chr4_4:43915688-43915707 | Msa0682410:CDS | 50.0% |
| ! | AATGGTACTGCTGCTGGTTG+GGG | + | chr4_4:43915961-43915980 | Msa0682410:CDS | 50.0% |
| ! | TGCTGCTGGTTGGGGTAATA+TGG | + | chr4_4:43915969-43915988 | Msa0682410:CDS | 50.0% |
| ! | GCTGCTGGTTGGGGTAATAT+GGG | + | chr4_4:43915970-43915989 | Msa0682410:CDS | 50.0% |
| GTTGGGGTAATATGGGTGGT+GGG | + | chr4_4:43915977-43915996 | Msa0682410:CDS | 50.0% | |
| TTGGGGTAATATGGGTGGTG+GGG | + | chr4_4:43915978-43915997 | Msa0682410:CDS | 50.0% | |
| ! | GTGCTACTCCTTTCACTGCT+TGG | + | chr4_4:43916049-43916068 | Msa0682410:CDS | 50.0% |
| ! | AAGGCACCAAGGTTACCATC+AGG | - | chr4_4:43916150-43916169 | None:intergenic | 50.0% |
| ! | CCTTCTTCTGTAAGGCACCA+AGG | - | chr4_4:43916161-43916180 | None:intergenic | 50.0% |
| !! | CCTTGGTGCCTTACAGAAGA+AGG | + | chr4_4:43916158-43916177 | Msa0682410:CDS | 50.0% |
| TTCCGGCTGTGTGTAGCTTT+AGG | - | chr4_4:43916664-43916683 | None:intergenic | 50.0% | |
| TTAGTTGCTCGTCCATTCGG+CGG | + | chr4_4:43916713-43916732 | Msa0682410:CDS | 50.0% | |
| TCTGATGCATAACCGCCGAA+TGG | - | chr4_4:43916728-43916747 | None:intergenic | 50.0% | |
| GCAAGATTATTCGGCATGCG+AGG | + | chr4_4:43916755-43916774 | Msa0682410:CDS | 50.0% | |
| GATTATTCGGCATGCGAGGA+AGG | + | chr4_4:43916759-43916778 | Msa0682410:CDS | 50.0% | |
| CTCTGGATCTTCCAAACCCT+AGG | + | chr4_4:43916791-43916810 | Msa0682410:CDS | 50.0% | |
| TGGATCTTCCAAACCCTAGG+AGG | + | chr4_4:43916794-43916813 | Msa0682410:CDS | 50.0% | |
| CTTGTGCTCCAACTGAGAAG+AGG | - | chr4_4:43916880-43916899 | None:intergenic | 50.0% | |
| GCAGCATGTGGTGCAACATT+TGG | + | chr4_4:43916899-43916918 | Msa0682410:CDS | 50.0% | |
| TCAGGTTTAACTGGTGCAGG+TGG | + | chr4_4:43916962-43916981 | Msa0682410:CDS | 50.0% | |
| ACTGGTGCAGGTGGAAACTT+TGG | + | chr4_4:43916971-43916990 | Msa0682410:CDS | 50.0% | |
| ! | GCAGGTGGAAACTTTGGTTC+AGG | + | chr4_4:43916977-43916996 | Msa0682410:CDS | 50.0% |
| ! | TTCTGAGAGAGGAAAGCGTG+TGG | + | chr4_4:43917246-43917265 | Msa0682410:CDS | 50.0% |
| TCACCAGGAAGCTCCATGCA+TGG | + | chr4_4:43915418-43915437 | Msa0682410:CDS | 55.0% | |
| ACTCCATGCATGGAGCTTCC+TGG | - | chr4_4:43915424-43915443 | None:intergenic | 55.0% | |
| AGCTCCATGCATGGAGTCAC+TGG | + | chr4_4:43915427-43915446 | Msa0682410:CDS | 55.0% | |
| ACCTGAAACCGAAGCGACTC+CGG | - | chr4_4:43915710-43915729 | None:intergenic | 55.0% | |
| GCTGGTTGGGGTAATATGGG+TGG | + | chr4_4:43915973-43915992 | Msa0682410:CDS | 55.0% | |
| GGTTGGGGTAATATGGGTGG+TGG | + | chr4_4:43915976-43915995 | Msa0682410:CDS | 55.0% | |
| ATTGTGGTCCGCAACTGCAG+TGG | - | chr4_4:43916529-43916548 | None:intergenic | 55.0% | |
| GAGGAAGGCTATGGACACTC+TGG | + | chr4_4:43916774-43916793 | Msa0682410:CDS | 55.0% | |
| GTTGGAGCACAAGCAGCATG+TGG | + | chr4_4:43916887-43916906 | Msa0682410:CDS | 55.0% | |
| AGGAACATGCTACCCCACTG+TGG | - | chr4_4:43917115-43917134 | None:intergenic | 55.0% | |
| TCACCAGGAAGCTCCATGCA+TGG | + | chr4_4:43915418-43915437 | Msa0682410:CDS | 55.0% | |
| ACTCCATGCATGGAGCTTCC+TGG | - | chr4_4:43915424-43915443 | None:intergenic | 55.0% | |
| AGCTCCATGCATGGAGTCAC+TGG | + | chr4_4:43915427-43915446 | Msa0682410:CDS | 55.0% | |
| ACCTGAAACCGAAGCGACTC+CGG | - | chr4_4:43915710-43915729 | None:intergenic | 55.0% | |
| GCTGGTTGGGGTAATATGGG+TGG | + | chr4_4:43915973-43915992 | Msa0682410:CDS | 55.0% | |
| GGTTGGGGTAATATGGGTGG+TGG | + | chr4_4:43915976-43915995 | Msa0682410:CDS | 55.0% | |
| ATTGTGGTCCGCAACTGCAG+TGG | - | chr4_4:43916529-43916548 | None:intergenic | 55.0% | |
| GAGGAAGGCTATGGACACTC+TGG | + | chr4_4:43916774-43916793 | Msa0682410:CDS | 55.0% | |
| GTTGGAGCACAAGCAGCATG+TGG | + | chr4_4:43916887-43916906 | Msa0682410:CDS | 55.0% | |
| AGGAACATGCTACCCCACTG+TGG | - | chr4_4:43917115-43917134 | None:intergenic | 55.0% | |
| GACTCCGGCGTTACCAACGT+CGG | - | chr4_4:43915695-43915714 | None:intergenic | 60.0% | |
| ! | TGGTAACGCCGGAGTCGCTT+CGG | + | chr4_4:43915699-43915718 | Msa0682410:CDS | 60.0% |
| TCGGCATGCGAGGAAGGCTA+TGG | + | chr4_4:43916765-43916784 | Msa0682410:CDS | 60.0% | |
| GACTCCGGCGTTACCAACGT+CGG | - | chr4_4:43915695-43915714 | None:intergenic | 60.0% | |
| ! | TGGTAACGCCGGAGTCGCTT+CGG | + | chr4_4:43915699-43915718 | Msa0682410:CDS | 60.0% |
| TCGGCATGCGAGGAAGGCTA+TGG | + | chr4_4:43916765-43916784 | Msa0682410:CDS | 60.0% | |
| GCCGGAGTCGCTTCGGTTTC+AGG | + | chr4_4:43915706-43915725 | Msa0682410:CDS | 65.0% | |
| GCCGGAGTCGCTTCGGTTTC+AGG | + | chr4_4:43915706-43915725 | Msa0682410:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 43915400 | 43917309 | 43915400 | ID=Msa0682410;Name=Msa0682410 |
| chr4_4 | mRNA | 43915400 | 43917309 | 43915400 | ID=Msa0682410-mRNA-1;Parent=Msa0682410;Name=Msa0682410-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|526 |
| chr4_4 | exon | 43915400 | 43916209 | 43915400 | ID=Msa0682410-mRNA-1:exon:10640;Parent=Msa0682410-mRNA-1 |
| chr4_4 | exon | 43916332 | 43916447 | 43916332 | ID=Msa0682410-mRNA-1:exon:10641;Parent=Msa0682410-mRNA-1 |
| chr4_4 | exon | 43916655 | 43917309 | 43916655 | ID=Msa0682410-mRNA-1:exon:10642;Parent=Msa0682410-mRNA-1 |
| chr4_4 | CDS | 43915400 | 43916209 | 43915400 | ID=Msa0682410-mRNA-1:cds;Parent=Msa0682410-mRNA-1 |
| chr4_4 | CDS | 43916332 | 43916447 | 43916332 | ID=Msa0682410-mRNA-1:cds;Parent=Msa0682410-mRNA-1 |
| chr4_4 | CDS | 43916655 | 43917309 | 43916655 | ID=Msa0682410-mRNA-1:cds;Parent=Msa0682410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
