Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435130 | XP_024633877.1 | 97.167 | 353 | 10 | 0 | 1 | 353 | 1 | 353 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435130 | sp|P74038|RSMI_SYNY3 | 45.556 | 270 | 147 | 0 | 70 | 339 | 4 | 273 | 5.32e-78 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435130 | A0A072VDF7 | 97.167 | 353 | 10 | 0 | 1 | 353 | 1 | 353 | 0.0 | 699 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0435130 | 0.820448 | 6.822747e-53 | -8.615850e-47 |
| Msa0026780 | Msa0435130 | -0.819749 | 9.862613e-53 | -8.615850e-47 |
| Msa0029520 | Msa0435130 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
| Msa0042950 | Msa0435130 | 0.811093 | 8.318652e-51 | -8.615850e-47 |
| Msa0066890 | Msa0435130 | 0.800193 | 1.616251e-48 | -8.615850e-47 |
| Msa0067590 | Msa0435130 | 0.825988 | 3.470526e-54 | -8.615850e-47 |
| Msa0081610 | Msa0435130 | 0.810603 | 1.061907e-50 | -8.615850e-47 |
| Msa0095810 | Msa0435130 | 0.820360 | 7.147957e-53 | -8.615850e-47 |
| Msa0111110 | Msa0435130 | 0.814209 | 1.731289e-51 | -8.615850e-47 |
| Msa0112550 | Msa0435130 | 0.807953 | 3.929082e-50 | -8.615850e-47 |
| Msa0112880 | Msa0435130 | 0.816487 | 5.391923e-52 | -8.615850e-47 |
| Msa0122530 | Msa0435130 | -0.805927 | 1.054100e-49 | -8.615850e-47 |
| Msa0127350 | Msa0435130 | 0.804139 | 2.492797e-49 | -8.615850e-47 |
| Msa0133140 | Msa0435130 | 0.807896 | 4.039681e-50 | -8.615850e-47 |
| Msa0136870 | Msa0435130 | 0.823383 | 1.427039e-53 | -8.615850e-47 |
| Msa0154880 | Msa0435130 | 0.807683 | 4.483199e-50 | -8.615850e-47 |
| Msa0154890 | Msa0435130 | 0.819768 | 9.765082e-53 | -8.615850e-47 |
| Msa0168770 | Msa0435130 | 0.815375 | 9.547976e-52 | -8.615850e-47 |
| Msa0173950 | Msa0435130 | 0.814109 | 1.821105e-51 | -8.615850e-47 |
| Msa0178840 | Msa0435130 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0187590 | Msa0435130 | 0.818449 | 1.948633e-52 | -8.615850e-47 |
| Msa0195810 | Msa0435130 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
| Msa0225790 | Msa0435130 | 0.803628 | 3.183681e-49 | -8.615850e-47 |
| Msa0367540 | Msa0435130 | 0.803332 | 3.666753e-49 | -8.615850e-47 |
| Msa0384780 | Msa0435130 | 0.889898 | 1.602710e-73 | -8.615850e-47 |
| Msa0385930 | Msa0435130 | 0.837773 | 4.264454e-57 | -8.615850e-47 |
| Msa0402070 | Msa0435130 | 0.815531 | 8.813783e-52 | -8.615850e-47 |
| Msa0415160 | Msa0435130 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
| Msa0435130 | Msa0436300 | 0.805202 | 1.495617e-49 | -8.615850e-47 |
| Msa0435130 | Msa0444770 | 0.806581 | 7.672267e-50 | -8.615850e-47 |
| Msa0435130 | Msa0480900 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
| Msa0435130 | Msa0500610 | 0.835734 | 1.412143e-56 | -8.615850e-47 |
| Msa0435130 | Msa0500700 | 0.824437 | 8.077053e-54 | -8.615850e-47 |
| Msa0435130 | Msa0523420 | 0.817856 | 2.654101e-52 | -8.615850e-47 |
| Msa0435130 | Msa0523430 | 0.801789 | 7.628014e-49 | -8.615850e-47 |
| Msa0435130 | Msa0548420 | -0.801625 | 8.242494e-49 | -8.615850e-47 |
| Msa0435130 | Msa0565370 | 0.808747 | 2.660914e-50 | -8.615850e-47 |
| Msa0435130 | Msa0565430 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0435130 | Msa0566940 | 0.827374 | 1.620897e-54 | -8.615850e-47 |
| Msa0435130 | Msa0588110 | 0.807399 | 5.152282e-50 | -8.615850e-47 |
| Msa0435130 | Msa0590620 | 0.836759 | 7.750356e-57 | -8.615850e-47 |
| Msa0435130 | Msa0626920 | -0.808526 | 2.965595e-50 | -8.615850e-47 |
| Msa0435130 | Msa0637930 | 0.810571 | 1.078675e-50 | -8.615850e-47 |
| Msa0435130 | Msa0638010 | 0.820563 | 6.421748e-53 | -8.615850e-47 |
| Msa0435130 | Msa0671210 | -0.802262 | 6.098169e-49 | -8.615850e-47 |
| Msa0435130 | Msa0701800 | 0.805258 | 1.456184e-49 | -8.615850e-47 |
| Msa0435130 | Msa0742370 | 0.851868 | 6.705603e-61 | -8.615850e-47 |
| Msa0435130 | Msa0752490 | 0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa0435130 | Msa0779450 | 0.848354 | 6.466683e-60 | -8.615850e-47 |
| Msa0435130 | Msa0823480 | 0.841295 | 5.183278e-58 | -8.615850e-47 |
| Msa0435130 | Msa0862480 | 0.847098 | 1.433384e-59 | -8.615850e-47 |
| Msa0435130 | Msa0919120 | 0.800142 | 1.655816e-48 | -8.615850e-47 |
| Msa0435130 | Msa1004410 | 0.804915 | 1.717476e-49 | -8.615850e-47 |
| Msa0435130 | Msa1039440 | 0.845039 | 5.206830e-59 | -8.615850e-47 |
| Msa0435130 | Msa1083620 | 0.814695 | 1.351618e-51 | -8.615850e-47 |
| Msa0435130 | Msa1085610 | 0.800108 | 1.682391e-48 | -8.615850e-47 |
| Msa0435130 | Msa1088400 | 0.800584 | 1.345846e-48 | -8.615850e-47 |
| Msa0435130 | Msa1121720 | 0.814214 | 1.726859e-51 | -8.615850e-47 |
| Msa0435130 | Msa1128610 | 0.840222 | 9.904972e-58 | -8.615850e-47 |
| Msa0435130 | Msa1129300 | 0.818432 | 1.966644e-52 | -8.615850e-47 |
| Msa0435130 | Msa1143810 | 0.803049 | 4.196866e-49 | -8.615850e-47 |
| Msa0435130 | Msa1184230 | -0.830458 | 2.903497e-55 | -8.615850e-47 |
| Msa0435130 | Msa1190100 | 0.804474 | 2.122802e-49 | -8.615850e-47 |
| Msa0435130 | Msa1207920 | 0.842164 | 3.056999e-58 | -8.615850e-47 |
| Msa0435130 | Msa1221270 | -0.804542 | 2.054998e-49 | -8.615850e-47 |
| Msa0435130 | Msa1236120 | 0.808055 | 3.737329e-50 | -8.615850e-47 |
| Msa0435130 | Msa1255480 | 0.814036 | 1.889963e-51 | -8.615850e-47 |
| Msa0435130 | Msa1258030 | 0.833931 | 4.017199e-56 | -8.615850e-47 |
| Msa0435130 | Msa1325560 | 0.806307 | 8.766457e-50 | -8.615850e-47 |
| Msa0435130 | Msa1331570 | 0.835119 | 2.019413e-56 | -8.615850e-47 |
| Msa0435130 | Msa1333220 | 0.818616 | 1.786633e-52 | -8.615850e-47 |
| Msa0435130 | Msa1342960 | 0.830643 | 2.615859e-55 | -8.615850e-47 |
| Msa0435130 | Msa1352600 | 0.827073 | 1.913571e-54 | -8.615850e-47 |
| Msa0435130 | Msa1356100 | 0.814364 | 1.600087e-51 | -8.615850e-47 |
| Msa0435130 | Msa1361670 | 0.842699 | 2.204765e-58 | -8.615850e-47 |
| Msa0435130 | Msa1364350 | 0.822468 | 2.330827e-53 | -8.615850e-47 |
| Msa0435130 | Msa1375970 | 0.804721 | 1.885419e-49 | -8.615850e-47 |
| Msa0435130 | Msa1381340 | 0.814049 | 1.877910e-51 | -8.615850e-47 |
| Msa0435130 | Msa1383630 | -0.803318 | 3.690651e-49 | -8.615850e-47 |
| Msa0435130 | Msa1396200 | 0.810231 | 1.277298e-50 | -8.615850e-47 |
| Msa0435130 | Msa1428230 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa0435130 | Msa1431510 | 0.835593 | 1.533164e-56 | -8.615850e-47 |
| Msa0435130 | Msa1457390 | 0.816182 | 6.308488e-52 | -8.615850e-47 |
| Msa0435130 | Msa1459130 | 0.803726 | 3.037685e-49 | -8.615850e-47 |
| Msa0241750 | Msa0435130 | -0.801917 | 7.180217e-49 | -8.615850e-47 |
| Msa0260580 | Msa0435130 | 0.810908 | 9.123439e-51 | -8.615850e-47 |
| Msa0260640 | Msa0435130 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
| Msa0275250 | Msa0435130 | 0.803743 | 3.013639e-49 | -8.615850e-47 |
| Msa0326170 | Msa0435130 | 0.804978 | 1.666195e-49 | -8.615850e-47 |
| Msa0326630 | Msa0435130 | 0.815714 | 8.025768e-52 | -8.615850e-47 |
| Msa0355080 | Msa0435130 | 0.837959 | 3.819615e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435130 | MtrunA17_Chr3g0141951 | 97.167 | 353 | 10 | 0 | 1 | 353 | 1 | 353 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435130 | AT1G45110.1 | 67.683 | 328 | 97 | 1 | 24 | 351 | 20 | 338 | 3.95e-163 | 459 |
Find 136 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATTGGCATGTATATTT+TGG | 0.155304 | 3_2:-88147116 | None:intergenic |
| TCACTTGCGTTGCGGAAATT+TGG | 0.163996 | 3_2:+88150815 | Msa0435130:CDS |
| TACCTTGTATCTCCGAAAAT+TGG | 0.264094 | 3_2:-88148472 | None:intergenic |
| ATTACAAGTTTATTATTATC+TGG | 0.272068 | 3_2:-88147393 | None:intergenic |
| AATGCAAAAGACATGAAAAT+AGG | 0.274144 | 3_2:+88147132 | Msa0435130:five_prime_UTR |
| CTAAGAGAATTAATTGAAAA+TGG | 0.305796 | 3_2:+88149878 | Msa0435130:CDS |
| TGCATGCCCTTCAATCAATA+TGG | 0.318102 | 3_2:-88149810 | None:intergenic |
| CAGCATTCACATTGTTTCCT+TGG | 0.323869 | 3_2:+88151125 | Msa0435130:three_prime_UTR |
| ACGAATAGAAAATTCTTTGC+TGG | 0.338729 | 3_2:-88149768 | None:intergenic |
| CACTTGCGTTGCGGAAATTT+GGG | 0.343746 | 3_2:+88150816 | Msa0435130:CDS |
| TCCACTGATGAATTTACATT+TGG | 0.349806 | 3_2:+88148231 | Msa0435130:CDS |
| ATAGGGGAGTTGAGGCGTTC+TGG | 0.354378 | 3_2:+88147150 | Msa0435130:five_prime_UTR |
| GGGGAAAAGGTAAGTTGCTT+TGG | 0.355232 | 3_2:-88147327 | None:intergenic |
| TGTACAAACTTGATCACTTA+AGG | 0.363904 | 3_2:+88151204 | Msa0435130:three_prime_UTR |
| ATGGGTTGTTAAATCCAAAA+AGG | 0.364319 | 3_2:+88151254 | Msa0435130:three_prime_UTR |
| ATGCAAAAGACATGAAAATA+GGG | 0.364980 | 3_2:+88147133 | Msa0435130:five_prime_UTR |
| TTAGAGTGGCAGATTATTCC+TGG | 0.370923 | 3_2:+88150868 | Msa0435130:exon |
| ACTCGGGATCAAGAAGAAAA+AGG | 0.373239 | 3_2:+88148365 | Msa0435130:CDS |
| TGGTAAACCATTCCTCTTGA+TGG | 0.374035 | 3_2:-88151059 | None:intergenic |
| CACCATTGTTCAGGGCTCTC+CGG | 0.379351 | 3_2:+88147743 | Msa0435130:intron |
| CTTCTTGATCCCGAGTGCTT+TGG | 0.381141 | 3_2:-88148358 | None:intergenic |
| AATCCCAGGTCCATGTGCTT+TGG | 0.393976 | 3_2:+88148182 | Msa0435130:CDS |
| CCTATTGTCATCCTAGTTGA+AGG | 0.407805 | 3_2:-88151033 | None:intergenic |
| GAGGTGGAGCAGAAGGATAA+AGG | 0.414381 | 3_2:-88147348 | None:intergenic |
| AGTGCTGGGGAAAGAACATC+TGG | 0.416490 | 3_2:-88151324 | None:intergenic |
| AGGTGGAGCAGAAGGATAAA+GGG | 0.418031 | 3_2:-88147347 | None:intergenic |
| CCCATAGGTTTAGATCTTGA+AGG | 0.424575 | 3_2:+88151151 | Msa0435130:three_prime_UTR |
| CCTTCAACTAGGATGACAAT+AGG | 0.426130 | 3_2:+88151033 | Msa0435130:three_prime_UTR |
| GGACCTGGGATTGGAACAAC+AGG | 0.427981 | 3_2:-88148171 | None:intergenic |
| TTGAAGGCATACTCAGCAAT+AGG | 0.430963 | 3_2:+88151167 | Msa0435130:three_prime_UTR |
| ACGAACTCTCTTGGTAGTGC+TGG | 0.433591 | 3_2:-88151339 | None:intergenic |
| GGCAGTGGAAAACGCCATCC+AGG | 0.443924 | 3_2:-88147268 | None:intergenic |
| ATCTTGAAGACATCACCTTC+AGG | 0.445097 | 3_2:+88147567 | Msa0435130:CDS |
| CTTTCTCAGTTTCTTGAAGA+GGG | 0.449860 | 3_2:+88148445 | Msa0435130:CDS |
| GGTATCGGCTCTTTCTGCCT+CGG | 0.453758 | 3_2:+88148203 | Msa0435130:CDS |
| GCCTTCAAGATCTAAACCTA+TGG | 0.454884 | 3_2:-88151152 | None:intergenic |
| AGGTCCATGTGCTTTGGTAT+CGG | 0.460351 | 3_2:+88148188 | Msa0435130:CDS |
| GTATCGGCTCTTTCTGCCTC+GGG | 0.462242 | 3_2:+88148204 | Msa0435130:CDS |
| CGGAAGACACGAGGCACTCT+GGG | 0.466378 | 3_2:+88147794 | Msa0435130:CDS |
| ACCATTGTTCAGGGCTCTCC+GGG | 0.474185 | 3_2:+88147744 | Msa0435130:intron |
| GCAGAAGGATAAAGGGGAAA+AGG | 0.477021 | 3_2:-88147340 | None:intergenic |
| AATATGGTAAGTTCTCCCTT+TGG | 0.477519 | 3_2:-88149794 | None:intergenic |
| CAGTGGAAGAGGTGCGGCAG+TGG | 0.480861 | 3_2:-88147283 | None:intergenic |
| AAGAAGGGAAAATGTTGCTT+CGG | 0.484632 | 3_2:+88147238 | Msa0435130:exon |
| AAAGCACATGGACCTGGGAT+TGG | 0.488329 | 3_2:-88148180 | None:intergenic |
| TCGGAAGACACGAGGCACTC+TGG | 0.490083 | 3_2:+88147793 | Msa0435130:CDS |
| GAACTTACCATATTGATTGA+AGG | 0.490717 | 3_2:+88149803 | Msa0435130:CDS |
| CACCTAATGACGAACTCTCT+TGG | 0.491464 | 3_2:-88151348 | None:intergenic |
| TTGTTTCCTTGGCTTCCCAT+AGG | 0.492224 | 3_2:+88151136 | Msa0435130:three_prime_UTR |
| TACCAAGAGAGTTCGTCATT+AGG | 0.492685 | 3_2:+88151346 | Msa0435130:three_prime_UTR |
| ATAAGTGACGCTGGAACGCC+TGG | 0.495165 | 3_2:+88148009 | Msa0435130:CDS |
| AAAGGTAAGTTGCTTTGGAA+TGG | 0.495257 | 3_2:-88147322 | None:intergenic |
| GTTCCTGTTGTTCCAATCCC+AGG | 0.500390 | 3_2:+88148168 | Msa0435130:CDS |
| AGATGGAATTTCCTCAACTT+AGG | 0.500826 | 3_2:-88151282 | None:intergenic |
| CGCTCGCAGCATCTCAAACC+CGG | 0.501413 | 3_2:+88147515 | Msa0435130:CDS |
| ATAAAGTTTCATAGAGTCAT+GGG | 0.503962 | 3_2:+88151236 | Msa0435130:three_prime_UTR |
| CGAACTCTCTTGGTAGTGCT+GGG | 0.505501 | 3_2:-88151338 | None:intergenic |
| ACGCCTGGTATCAGTGATCC+TGG | 0.507533 | 3_2:+88148024 | Msa0435130:CDS |
| AAGTTGCTTTGGAATGGAAA+AGG | 0.508393 | 3_2:-88147316 | None:intergenic |
| TATAAAGTTTCATAGAGTCA+TGG | 0.508859 | 3_2:+88151235 | Msa0435130:three_prime_UTR |
| CATGGCTTCAGCAGAGCAAA+CGG | 0.510069 | 3_2:+88148390 | Msa0435130:CDS |
| CTCCGCTGATGTTATACTAT+CGG | 0.517324 | 3_2:+88147774 | Msa0435130:CDS |
| AGTGAGATGGAGTTCGGAGG+TGG | 0.517915 | 3_2:-88147364 | None:intergenic |
| GAAGAAGAATACAGTGGAAG+AGG | 0.520210 | 3_2:-88147294 | None:intergenic |
| CAGTGATCCTGGTATGGAGT+TGG | 0.526144 | 3_2:+88148035 | Msa0435130:CDS |
| CAAATTCAATGAATCACAAA+GGG | 0.528109 | 3_2:+88147939 | Msa0435130:CDS |
| GATACCAAAGCACATGGACC+TGG | 0.530974 | 3_2:-88148186 | None:intergenic |
| GCTTTCTCAGTTTCTTGAAG+AGG | 0.533813 | 3_2:+88148444 | Msa0435130:CDS |
| GAGTTCGGAGGTGGAGCAGA+AGG | 0.534037 | 3_2:-88147355 | None:intergenic |
| CCTTCAAGATCTAAACCTAT+GGG | 0.538219 | 3_2:-88151151 | None:intergenic |
| TGTTGCTTCGGCGATTACCC+TGG | 0.538601 | 3_2:+88147250 | Msa0435130:CDS |
| TTCTCAAGCTCAATGTCCGA+TGG | 0.538928 | 3_2:-88149851 | None:intergenic |
| GAACAACTGCTGATCATGTA+TGG | 0.540604 | 3_2:+88151088 | Msa0435130:three_prime_UTR |
| TTCTAAAGTTGAACCTCCAT+CGG | 0.541066 | 3_2:+88149835 | Msa0435130:CDS |
| AAACCCGGTCTTTATCTCGT+TGG | 0.542040 | 3_2:+88147530 | Msa0435130:CDS |
| AAAGGGAACAACTTGTGCTC+AGG | 0.542988 | 3_2:+88147956 | Msa0435130:CDS |
| TGGTATCAGTGATCCTGGTA+TGG | 0.543755 | 3_2:+88148029 | Msa0435130:CDS |
| ATACTTACCAACTCCATACC+AGG | 0.545915 | 3_2:-88148042 | None:intergenic |
| GATGTCTTCAAGATTTCCGA+TGG | 0.546308 | 3_2:-88147558 | None:intergenic |
| AACTTACCATATTGATTGAA+GGG | 0.547874 | 3_2:+88149804 | Msa0435130:CDS |
| TGTTGTTCAATCCTTCAACT+AGG | 0.551038 | 3_2:+88151022 | Msa0435130:three_prime_UTR |
| GCTTCGGCGATTACCCTGGA+TGG | 0.551601 | 3_2:+88147254 | Msa0435130:CDS |
| TGAATACAAGACGAGGGAGA+TGG | 0.553184 | 3_2:-88151299 | None:intergenic |
| ATTTGGGAAGCAACTTGAAG+TGG | 0.553937 | 3_2:+88150832 | Msa0435130:CDS |
| TGTTCCAACGAGATAAAGAC+CGG | 0.559367 | 3_2:-88147534 | None:intergenic |
| CTATATATTCACTTGCGTTG+CGG | 0.562841 | 3_2:+88150807 | Msa0435130:CDS |
| ATGCTGAGTGAGATGGAGTT+CGG | 0.563325 | 3_2:-88147370 | None:intergenic |
| AGTCAAGGAACTACTACTCA+TGG | 0.564499 | 3_2:-88151377 | None:intergenic |
| TATCTCGTTGGAACACCCAT+CGG | 0.564506 | 3_2:+88147542 | Msa0435130:CDS |
| ATCAGCAGTTGTTCAACAAG+TGG | 0.565298 | 3_2:-88151079 | None:intergenic |
| TCTAAACCTATGGGAAGCCA+AGG | 0.572590 | 3_2:-88151142 | None:intergenic |
| TAGGCTTCCATCAAGAGGAA+TGG | 0.573879 | 3_2:+88151052 | Msa0435130:three_prime_UTR |
| CTGATCATGTATGGTTCGGT+TGG | 0.577367 | 3_2:+88151097 | Msa0435130:three_prime_UTR |
| TGGGAAGCAACTTGAAGTGG+AGG | 0.586399 | 3_2:+88150835 | Msa0435130:CDS |
| GGGAACAACTTGTGCTCAGG+AGG | 0.587717 | 3_2:+88147959 | Msa0435130:CDS |
| GAGGATGATTCAAGTTAGAG+TGG | 0.594981 | 3_2:+88150854 | Msa0435130:exon |
| CAAGGAAACAATGTGAATGC+TGG | 0.595372 | 3_2:-88151124 | None:intergenic |
| AGAAACTGAGAAAGCTTGTG+TGG | 0.598616 | 3_2:-88148436 | None:intergenic |
| ACAAATTCAATGAATCACAA+AGG | 0.598902 | 3_2:+88147938 | Msa0435130:CDS |
| GAAAAGGAAGAAGAATACAG+TGG | 0.600108 | 3_2:-88147300 | None:intergenic |
| ACATGAAAATAGGGGAGTTG+AGG | 0.604813 | 3_2:+88147142 | Msa0435130:five_prime_UTR |
| ACTGCTGATCATGTATGGTT+CGG | 0.611818 | 3_2:+88151093 | Msa0435130:three_prime_UTR |
| GCAGTGGAAAACGCCATCCA+GGG | 0.611925 | 3_2:-88147267 | None:intergenic |
| AATGACAAAGTTTCACGAAG+AGG | 0.615304 | 3_2:+88148852 | Msa0435130:CDS |
| GACAATAGGCTTCCATCAAG+AGG | 0.621077 | 3_2:+88151047 | Msa0435130:three_prime_UTR |
| TGCAAAAGACATGAAAATAG+GGG | 0.626976 | 3_2:+88147134 | Msa0435130:five_prime_UTR |
| ACCAAATGTAAATTCATCAG+TGG | 0.627138 | 3_2:-88148232 | None:intergenic |
| TATCTGGATGCTGAGTGAGA+TGG | 0.629940 | 3_2:-88147377 | None:intergenic |
| GTGGCACTTATAAGTGACGC+TGG | 0.634936 | 3_2:+88148000 | Msa0435130:CDS |
| ATGTCTTCAAGATTTCCGAT+GGG | 0.635435 | 3_2:-88147557 | None:intergenic |
| ATACCAAAGCACATGGACCT+GGG | 0.636160 | 3_2:-88148185 | None:intergenic |
| ATACCAGGATCACTGATACC+AGG | 0.638129 | 3_2:-88148027 | None:intergenic |
| TCAAGCTCAATGTCCGATGG+AGG | 0.640534 | 3_2:-88149848 | None:intergenic |
| TTCCGATAGTATAACATCAG+CGG | 0.642678 | 3_2:-88147776 | None:intergenic |
| AACTGAGAAAGCTTGTGTGG+AGG | 0.643791 | 3_2:-88148433 | None:intergenic |
| GTTGAAACAAGGTGAGATTG+TGG | 0.644732 | 3_2:+88147981 | Msa0435130:CDS |
| AGAATACAGTGGAAGAGGTG+CGG | 0.646714 | 3_2:-88147289 | None:intergenic |
| TATTTCTGAGATAAGAGTCA+AGG | 0.647630 | 3_2:-88151392 | None:intergenic |
| AAATGGCGAGAGTCTTTCCA+CGG | 0.651793 | 3_2:+88149895 | Msa0435130:CDS |
| ATGCAGGCCAAATTATGTGT+TGG | 0.654583 | 3_2:+88148138 | Msa0435130:intron |
| ATTGGTAGCTGAAAGAACAT+CGG | 0.668003 | 3_2:+88150772 | Msa0435130:CDS |
| GGTGGAGCAGAAGGATAAAG+GGG | 0.669561 | 3_2:-88147346 | None:intergenic |
| GTGCTCAGGAGGTTGAAACA+AGG | 0.672276 | 3_2:+88147970 | Msa0435130:CDS |
| TTCATCAGTGGATAAACCCG+AGG | 0.672572 | 3_2:-88148220 | None:intergenic |
| CATCAGCGGAGTTCAACACC+CGG | 0.673155 | 3_2:-88147762 | None:intergenic |
| TTAAAATTGGAACGTAAACG+CGG | 0.674691 | 3_2:-88147210 | None:intergenic |
| AAAAGGAAAAGCCTAAGTTG+AGG | 0.674692 | 3_2:+88151271 | Msa0435130:three_prime_UTR |
| AGAGCCGATACCAAAGCACA+TGG | 0.677490 | 3_2:-88148192 | None:intergenic |
| GAACTCTCTTGGTAGTGCTG+GGG | 0.678032 | 3_2:-88151337 | None:intergenic |
| TTATACTATCGGAAGACACG+AGG | 0.685377 | 3_2:+88147785 | Msa0435130:CDS |
| CTGGGATGAATACAAGACGA+GGG | 0.701924 | 3_2:-88151305 | None:intergenic |
| GTTCCAACGAGATAAAGACC+GGG | 0.703315 | 3_2:-88147533 | None:intergenic |
| GAGTGGCAGATTATTCCTGG+AGG | 0.706671 | 3_2:+88150871 | Msa0435130:exon |
| GTGCTGGGGAAAGAACATCT+GGG | 0.711814 | 3_2:-88151323 | None:intergenic |
| CTGAGTGAGATGGAGTTCGG+AGG | 0.718535 | 3_2:-88147367 | None:intergenic |
| TCTGGGATGAATACAAGACG+AGG | 0.737978 | 3_2:-88151306 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAGTTTATCATAATAA+TGG | - | chr3_2:88149584-88149603 | None:intergenic | 10.0% |
| !! | TGTTAAAAATAATCAAATTA+TGG | + | chr3_2:88149965-88149984 | Msa0435130:intron | 10.0% |
| !! | ATTACAAGTTTATTATTATC+TGG | - | chr3_2:88147396-88147415 | None:intergenic | 15.0% |
| !!! | TCATGAATTATTTTAATTGA+AGG | + | chr3_2:88149545-88149564 | Msa0435130:intron | 15.0% |
| !! | AATAATCAAATTATGGAATA+TGG | + | chr3_2:88149972-88149991 | Msa0435130:intron | 15.0% |
| !!! | TTGATTAAAAATCAATTTTG+AGG | - | chr3_2:88150287-88150306 | None:intergenic | 15.0% |
| !!! | AAATTGATTTTTAATCAACT+TGG | + | chr3_2:88150289-88150308 | Msa0435130:intron | 15.0% |
| !! | TGATATAAAAATGTATACAA+AGG | + | chr3_2:88151457-88151476 | Msa0435130:three_prime_UTR | 15.0% |
| !! | GATATAAAAATGTATACAAA+GGG | + | chr3_2:88151458-88151477 | Msa0435130:three_prime_UTR | 15.0% |
| !!! | TCCAATTTTAATAGAAAAGA+AGG | + | chr3_2:88147222-88147241 | Msa0435130:five_prime_UTR | 20.0% |
| !!! | CCAATTTTAATAGAAAAGAA+GGG | + | chr3_2:88147223-88147242 | Msa0435130:five_prime_UTR | 20.0% |
| !!! | ACATTTTTCATTATGCATTT+TGG | + | chr3_2:88147596-88147615 | Msa0435130:intron | 20.0% |
| !! | ACTAGAAAAAATACATTGAT+GGG | - | chr3_2:88148328-88148347 | None:intergenic | 20.0% |
| !!! | ATCAATGTATTTTTTCTAGT+CGG | + | chr3_2:88148328-88148347 | Msa0435130:intron | 20.0% |
| !! | CAACTCAAAAATATAAAAGT+GGG | - | chr3_2:88148594-88148613 | None:intergenic | 20.0% |
| !! | CATAAGATGAATAAAATTCA+AGG | - | chr3_2:88148706-88148725 | None:intergenic | 20.0% |
| !!! | CATGAAAAAGAAATTGTTTT+AGG | + | chr3_2:88149119-88149138 | Msa0435130:intron | 20.0% |
| !! | CTAAGAGAATTAATTGAAAA+TGG | + | chr3_2:88149878-88149897 | Msa0435130:CDS | 20.0% |
| !! | TAAAATTGAATGTGTCTATT+GGG | - | chr3_2:88149930-88149949 | None:intergenic | 20.0% |
| !!! | GTTAAAAGTAAAAAAGCATT+TGG | + | chr3_2:88150025-88150044 | Msa0435130:intron | 20.0% |
| !!! | TTATTTGATATTAGCTTTCA+AGG | - | chr3_2:88150092-88150111 | None:intergenic | 20.0% |
| !!! | TAATCATTTTGAAGTGAATA+TGG | + | chr3_2:88150120-88150139 | Msa0435130:intron | 20.0% |
| !!! | AAATTTGTTGAGAATGAAAA+TGG | - | chr3_2:88150225-88150244 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAGAGTATTATAA+AGG | + | chr3_2:88150442-88150461 | Msa0435130:intron | 20.0% |
| !!! | TTTGTTGAGAGTATTATAAA+GGG | + | chr3_2:88150443-88150462 | Msa0435130:intron | 20.0% |
| !! | TGACAAAAATTAAGATATGT+GGG | - | chr3_2:88150532-88150551 | None:intergenic | 20.0% |
| !! | TTGACAAAAATTAAGATATG+TGG | - | chr3_2:88150533-88150552 | None:intergenic | 20.0% |
| !! | TATTTTCATGTCTTTTGCAT+TGG | - | chr3_2:88147133-88147152 | None:intergenic | 25.0% |
| ! | AATGCAAAAGACATGAAAAT+AGG | + | chr3_2:88147132-88147151 | Msa0435130:five_prime_UTR | 25.0% |
| ! | ATGCAAAAGACATGAAAATA+GGG | + | chr3_2:88147133-88147152 | Msa0435130:five_prime_UTR | 25.0% |
| !! | CCCTTCTTTTCTATTAAAAT+TGG | - | chr3_2:88147226-88147245 | None:intergenic | 25.0% |
| ! | ACAAATTCAATGAATCACAA+AGG | + | chr3_2:88147938-88147957 | Msa0435130:CDS | 25.0% |
| ! | CAAATTCAATGAATCACAAA+GGG | + | chr3_2:88147939-88147958 | Msa0435130:CDS | 25.0% |
| !! | ATTTTCACCAACACATAATT+TGG | - | chr3_2:88148148-88148167 | None:intergenic | 25.0% |
| ! | GACTAGAAAAAATACATTGA+TGG | - | chr3_2:88148329-88148348 | None:intergenic | 25.0% |
| ! | ATTACGATTAAGGAAAAGTT+TGG | - | chr3_2:88148498-88148517 | None:intergenic | 25.0% |
| ! | CCAACTCAAAAATATAAAAG+TGG | - | chr3_2:88148595-88148614 | None:intergenic | 25.0% |
| !!! | CCACTTTTATATTTTTGAGT+TGG | + | chr3_2:88148592-88148611 | Msa0435130:intron | 25.0% |
| ! | TCACAAAATTAGCAAATCAA+TGG | - | chr3_2:88148623-88148642 | None:intergenic | 25.0% |
| ! | CAAATCAAACAAACAGTTTA+AGG | - | chr3_2:88148670-88148689 | None:intergenic | 25.0% |
| ! | AGATGAATAAAATTCAAGGT+GGG | - | chr3_2:88148702-88148721 | None:intergenic | 25.0% |
| ! | AAGATGAATAAAATTCAAGG+TGG | - | chr3_2:88148703-88148722 | None:intergenic | 25.0% |
| !!! | TGCTAATTATCTTATTTCTG+TGG | + | chr3_2:88148933-88148952 | Msa0435130:intron | 25.0% |
| !!! | AGTACTTTTAATTTAACCAG+TGG | + | chr3_2:88148976-88148995 | Msa0435130:intron | 25.0% |
| !!! | GTACTTTTAATTTAACCAGT+GGG | + | chr3_2:88148977-88148996 | Msa0435130:intron | 25.0% |
| ! | GCATATGAGTTAAAAAACTA+AGG | - | chr3_2:88149012-88149031 | None:intergenic | 25.0% |
| ! | TTAATTCATTCCATTAGTGT+TGG | - | chr3_2:88149034-88149053 | None:intergenic | 25.0% |
| ! | TGAGAAAAACAATAACATGA+TGG | - | chr3_2:88149101-88149120 | None:intergenic | 25.0% |
| ! | AATCGTTGAAAAAATTTAGC+AGG | - | chr3_2:88149146-88149165 | None:intergenic | 25.0% |
| !!! | TTGATTTGTTTTCCATGATT+GGG | + | chr3_2:88149204-88149223 | Msa0435130:intron | 25.0% |
| ! | TCTCTTGTTAATGTAATGTA+CGG | + | chr3_2:88149260-88149279 | Msa0435130:intron | 25.0% |
| ! | TAAGGAATAAAAGAGAAAGT+TGG | - | chr3_2:88149354-88149373 | None:intergenic | 25.0% |
| !! | TCTCTTTTATTCCTTAACTA+CGG | + | chr3_2:88149358-88149377 | Msa0435130:intron | 25.0% |
| !!! | AACATAATCATTGCTTTTTG+CGG | - | chr3_2:88149483-88149502 | None:intergenic | 25.0% |
| ! | ATGAGTGATGTATATTCATT+GGG | - | chr3_2:88149529-88149548 | None:intergenic | 25.0% |
| ! | AATAAGAACAAACAAGTCAT+TGG | - | chr3_2:88149648-88149667 | None:intergenic | 25.0% |
| !!! | TTATTTTAACAACGTTCTCT+AGG | + | chr3_2:88149663-88149682 | Msa0435130:intron | 25.0% |
| !! | AACTTACCATATTGATTGAA+GGG | + | chr3_2:88149804-88149823 | Msa0435130:CDS | 25.0% |
| ! | CTAAAATTGAATGTGTCTAT+TGG | - | chr3_2:88149931-88149950 | None:intergenic | 25.0% |
| ! | CATTTGGATTTCAACATATA+TGG | + | chr3_2:88150041-88150060 | Msa0435130:intron | 25.0% |
| !! | TGGAAATATTTTCATAGCAT+AGG | - | chr3_2:88150205-88150224 | None:intergenic | 25.0% |
| !! | AATTTGCTTAAGCTTATCTT+AGG | + | chr3_2:88150313-88150332 | Msa0435130:intron | 25.0% |
| !! | ATTGACTCATGCTTATTAAT+TGG | + | chr3_2:88150671-88150690 | Msa0435130:intron | 25.0% |
| !!! | ATGTTTTTAGGCTGTTAAAT+TGG | + | chr3_2:88150754-88150773 | Msa0435130:intron | 25.0% |
| !! | TGTTAATTACAGAATGCTTT+TGG | - | chr3_2:88150969-88150988 | None:intergenic | 25.0% |
| ! | TATAAAGTTTCATAGAGTCA+TGG | + | chr3_2:88151235-88151254 | Msa0435130:three_prime_UTR | 25.0% |
| ! | ATAAAGTTTCATAGAGTCAT+GGG | + | chr3_2:88151236-88151255 | Msa0435130:three_prime_UTR | 25.0% |
| TGCAAAAGACATGAAAATAG+GGG | + | chr3_2:88147134-88147153 | Msa0435130:five_prime_UTR | 30.0% | |
| !! | GGATATTTTTATGTGGGATT+CGG | - | chr3_2:88147192-88147211 | None:intergenic | 30.0% |
| !! | AAACGCGGATATTTTTATGT+GGG | - | chr3_2:88147198-88147217 | None:intergenic | 30.0% |
| !! | TAAACGCGGATATTTTTATG+TGG | - | chr3_2:88147199-88147218 | None:intergenic | 30.0% |
| TTAAAATTGGAACGTAAACG+CGG | - | chr3_2:88147213-88147232 | None:intergenic | 30.0% | |
| ! | TCATTTTCGTTCCATTTTCT+AGG | + | chr3_2:88147417-88147436 | Msa0435130:intron | 30.0% |
| GAAAAGTAAAGCCTAGAAAA+TGG | - | chr3_2:88147431-88147450 | None:intergenic | 30.0% | |
| AAAAACTGAGTGAATGTTGA+GGG | - | chr3_2:88147453-88147472 | None:intergenic | 30.0% | |
| GAAAAATGTTTCATACCTGA+AGG | - | chr3_2:88147585-88147604 | None:intergenic | 30.0% | |
| TCCACTGATGAATTTACATT+TGG | + | chr3_2:88148231-88148250 | Msa0435130:CDS | 30.0% | |
| ACCAAATGTAAATTCATCAG+TGG | - | chr3_2:88148235-88148254 | None:intergenic | 30.0% | |
| AATTAACTGACTGAACGATA+TGG | + | chr3_2:88148255-88148274 | Msa0435130:intron | 30.0% | |
| ATTAACTGACTGAACGATAT+GGG | + | chr3_2:88148256-88148275 | Msa0435130:intron | 30.0% | |
| TAAGCATGCAATTACGATTA+AGG | - | chr3_2:88148508-88148527 | None:intergenic | 30.0% | |
| AGAACATAGTACTTATGTTC+AGG | - | chr3_2:88148535-88148554 | None:intergenic | 30.0% | |
| !! | CTTCATTTTGATGATATTGC+AGG | + | chr3_2:88148809-88148828 | Msa0435130:intron | 30.0% |
| ATCCTTCTGACATCAATATT+TGG | + | chr3_2:88148889-88148908 | Msa0435130:intron | 30.0% | |
| TACCAAATATTGATGTCAGA+AGG | - | chr3_2:88148894-88148913 | None:intergenic | 30.0% | |
| AATTTAACCAGTGGGAATAA+AGG | + | chr3_2:88148985-88149004 | Msa0435130:intron | 30.0% | |
| CAATAACATGATGGTAAAGA+AGG | - | chr3_2:88149092-88149111 | None:intergenic | 30.0% | |
| !!! | CTTGATTTGTTTTCCATGAT+TGG | + | chr3_2:88149203-88149222 | Msa0435130:intron | 30.0% |
| ! | TTTTCTGTTTGTAACTTCTC+TGG | + | chr3_2:88149430-88149449 | Msa0435130:intron | 30.0% |
| CATGAGTGATGTATATTCAT+TGG | - | chr3_2:88149530-88149549 | None:intergenic | 30.0% | |
| ATTAATTCCTGTCATAAGTG+TGG | + | chr3_2:88149602-88149621 | Msa0435130:intron | 30.0% | |
| TTAATTCCTGTCATAAGTGT+GGG | + | chr3_2:88149603-88149622 | Msa0435130:intron | 30.0% | |
| ! | GCACATCAATTTTGTAGTTT+TGG | + | chr3_2:88149726-88149745 | Msa0435130:intron | 30.0% |
| ACGAATAGAAAATTCTTTGC+TGG | - | chr3_2:88149771-88149790 | None:intergenic | 30.0% | |
| ! | GAACTTACCATATTGATTGA+AGG | + | chr3_2:88149803-88149822 | Msa0435130:CDS | 30.0% |
| ! | TTTCTTTTACTAACATGAGC+AGG | - | chr3_2:88150178-88150197 | None:intergenic | 30.0% |
| AGGTGGAGGAAAATATATAT+GGG | + | chr3_2:88150411-88150430 | Msa0435130:intron | 30.0% | |
| !! | TTGAGAGTATTATAAAGGGA+GGG | + | chr3_2:88150447-88150466 | Msa0435130:intron | 30.0% |
| AATGCATTTGGAAAAGACTT+CGG | - | chr3_2:88150501-88150520 | None:intergenic | 30.0% | |
| ! | ACCTAGCATATTTTATCTCT+AGG | + | chr3_2:88150645-88150664 | Msa0435130:intron | 30.0% |
| ACCTAGAGATAAAATATGCT+AGG | - | chr3_2:88150649-88150668 | None:intergenic | 30.0% | |
| ! | TTTAGGGTACAATAACTAAC+AGG | - | chr3_2:88150944-88150963 | None:intergenic | 30.0% |
| ! | CAGAATGCTTTTGGATTTTA+GGG | - | chr3_2:88150960-88150979 | None:intergenic | 30.0% |
| ! | ACAGAATGCTTTTGGATTTT+AGG | - | chr3_2:88150961-88150980 | None:intergenic | 30.0% |
| TGTACAAACTTGATCACTTA+AGG | + | chr3_2:88151204-88151223 | Msa0435130:three_prime_UTR | 30.0% | |
| ! | ATGGGTTGTTAAATCCAAAA+AGG | + | chr3_2:88151254-88151273 | Msa0435130:three_prime_UTR | 30.0% |
| !! | TATTTCTGAGATAAGAGTCA+AGG | - | chr3_2:88151395-88151414 | None:intergenic | 30.0% |
| ! | AAGAAGGGAAAATGTTGCTT+CGG | + | chr3_2:88147238-88147257 | Msa0435130:exon | 35.0% |
| GAAAAGGAAGAAGAATACAG+TGG | - | chr3_2:88147303-88147322 | None:intergenic | 35.0% | |
| !! | AAGTTGCTTTGGAATGGAAA+AGG | - | chr3_2:88147319-88147338 | None:intergenic | 35.0% |
| !! | AAAGGTAAGTTGCTTTGGAA+TGG | - | chr3_2:88147325-88147344 | None:intergenic | 35.0% |
| CAAAAACTGAGTGAATGTTG+AGG | - | chr3_2:88147454-88147473 | None:intergenic | 35.0% | |
| ATGTCTTCAAGATTTCCGAT+GGG | - | chr3_2:88147560-88147579 | None:intergenic | 35.0% | |
| ! | ACACAACACTTAGCTCATTT+TGG | + | chr3_2:88147716-88147735 | Msa0435130:intron | 35.0% |
| TTCCGATAGTATAACATCAG+CGG | - | chr3_2:88147779-88147798 | None:intergenic | 35.0% | |
| TGAAATGAAATTTCCCGAAG+TGG | - | chr3_2:88147877-88147896 | None:intergenic | 35.0% | |
| TGATAAGAGTAAACAAGCAC+AGG | - | chr3_2:88148077-88148096 | None:intergenic | 35.0% | |
| ! | CATTGATGGGCAATTACTTT+AGG | - | chr3_2:88148315-88148334 | None:intergenic | 35.0% |
| ATCAAGAAGAAAAAGGCTCA+TGG | + | chr3_2:88148372-88148391 | Msa0435130:CDS | 35.0% | |
| CTTTCTCAGTTTCTTGAAGA+GGG | + | chr3_2:88148445-88148464 | Msa0435130:CDS | 35.0% | |
| TACCTTGTATCTCCGAAAAT+TGG | - | chr3_2:88148475-88148494 | None:intergenic | 35.0% | |
| AGTGATACCTATGTTCGTTA+GGG | + | chr3_2:88148756-88148775 | Msa0435130:intron | 35.0% | |
| AATGAAGAGTCAACCAATCT+AGG | - | chr3_2:88148796-88148815 | None:intergenic | 35.0% | |
| AATGACAAAGTTTCACGAAG+AGG | + | chr3_2:88148852-88148871 | Msa0435130:CDS | 35.0% | |
| AACTCATATGCCAACACTAA+TGG | + | chr3_2:88149021-88149040 | Msa0435130:intron | 35.0% | |
| TTTCAACGATTCCTTAACTC+TGG | + | chr3_2:88149155-88149174 | Msa0435130:intron | 35.0% | |
| ATTCCTTAACTCTGGTTGAA+GGG | + | chr3_2:88149163-88149182 | Msa0435130:intron | 35.0% | |
| !! | ATTTGTTTTCCATGATTGGG+AGG | + | chr3_2:88149207-88149226 | Msa0435130:intron | 35.0% |
| ATAGTTCTCTTGCTCTTTCT+TGG | + | chr3_2:88149300-88149319 | Msa0435130:intron | 35.0% | |
| TAGTTCTCTTGCTCTTTCTT+GGG | + | chr3_2:88149301-88149320 | Msa0435130:intron | 35.0% | |
| !!! | TCAATTTTGTAGTTTTGGCG+CGG | + | chr3_2:88149731-88149750 | Msa0435130:intron | 35.0% |
| ! | ATTTTCTATTCGTCAGCCAA+AGG | + | chr3_2:88149778-88149797 | Msa0435130:CDS | 35.0% |
| ! | TTTTCTATTCGTCAGCCAAA+GGG | + | chr3_2:88149779-88149798 | Msa0435130:CDS | 35.0% |
| AATATGGTAAGTTCTCCCTT+TGG | - | chr3_2:88149797-88149816 | None:intergenic | 35.0% | |
| !! | TTCTAAAGTTGAACCTCCAT+CGG | + | chr3_2:88149835-88149854 | Msa0435130:CDS | 35.0% |
| !! | AGCTTATCTTAGGCTTTGTT+TGG | + | chr3_2:88150323-88150342 | Msa0435130:intron | 35.0% |
| !! | GCTTATCTTAGGCTTTGTTT+GGG | + | chr3_2:88150324-88150343 | Msa0435130:intron | 35.0% |
| GAGGTGGAGGAAAATATATA+TGG | + | chr3_2:88150410-88150429 | Msa0435130:intron | 35.0% | |
| !! | GTTGAGAGTATTATAAAGGG+AGG | + | chr3_2:88150446-88150465 | Msa0435130:intron | 35.0% |
| GAGTAATAAATCCTCATGCA+AGG | + | chr3_2:88150558-88150577 | Msa0435130:intron | 35.0% | |
| TAATAAATCCTCATGCAAGG+TGG | + | chr3_2:88150561-88150580 | Msa0435130:intron | 35.0% | |
| AATAAATCCTCATGCAAGGT+GGG | + | chr3_2:88150562-88150581 | Msa0435130:intron | 35.0% | |
| ! | ATTGGTAGCTGAAAGAACAT+CGG | + | chr3_2:88150772-88150791 | Msa0435130:CDS | 35.0% |
| CTATATATTCACTTGCGTTG+CGG | + | chr3_2:88150807-88150826 | Msa0435130:CDS | 35.0% | |
| GAGAAAATGAAACACCAACA+CGG | - | chr3_2:88150911-88150930 | None:intergenic | 35.0% | |
| GTACAATAACTAACAGGAGT+TGG | - | chr3_2:88150938-88150957 | None:intergenic | 35.0% | |
| TGTTGTTCAATCCTTCAACT+AGG | + | chr3_2:88151022-88151041 | Msa0435130:three_prime_UTR | 35.0% | |
| CCTTCAAGATCTAAACCTAT+GGG | - | chr3_2:88151154-88151173 | None:intergenic | 35.0% | |
| ! | CAACTTAGGCTTTTCCTTTT+TGG | - | chr3_2:88151271-88151290 | None:intergenic | 35.0% |
| AAAAGGAAAAGCCTAAGTTG+AGG | + | chr3_2:88151271-88151290 | Msa0435130:three_prime_UTR | 35.0% | |
| AGATGGAATTTCCTCAACTT+AGG | - | chr3_2:88151285-88151304 | None:intergenic | 35.0% | |
| ACATGAAAATAGGGGAGTTG+AGG | + | chr3_2:88147142-88147161 | Msa0435130:five_prime_UTR | 40.0% | |
| GAAGAAGAATACAGTGGAAG+AGG | - | chr3_2:88147297-88147316 | None:intergenic | 40.0% | |
| TGTTCCAACGAGATAAAGAC+CGG | - | chr3_2:88147537-88147556 | None:intergenic | 40.0% | |
| GATGTCTTCAAGATTTCCGA+TGG | - | chr3_2:88147561-88147580 | None:intergenic | 40.0% | |
| ATCTTGAAGACATCACCTTC+AGG | + | chr3_2:88147567-88147586 | Msa0435130:CDS | 40.0% | |
| ! | TTTGGTTCACACCATTGTTC+AGG | + | chr3_2:88147734-88147753 | Msa0435130:intron | 40.0% |
| TTGGTTCACACCATTGTTCA+GGG | + | chr3_2:88147735-88147754 | Msa0435130:intron | 40.0% | |
| CTCCGCTGATGTTATACTAT+CGG | + | chr3_2:88147774-88147793 | Msa0435130:CDS | 40.0% | |
| TTATACTATCGGAAGACACG+AGG | + | chr3_2:88147785-88147804 | Msa0435130:CDS | 40.0% | |
| AAAAGGAAGAGGCTTACAAG+GGG | - | chr3_2:88147850-88147869 | None:intergenic | 40.0% | |
| GAAAAGGAAGAGGCTTACAA+GGG | - | chr3_2:88147851-88147870 | None:intergenic | 40.0% | |
| ! | TCTTCCTTTTCCTTCCACTT+CGG | + | chr3_2:88147860-88147879 | Msa0435130:intron | 40.0% |
| ATGAAATTTCCCGAAGTGGA+AGG | - | chr3_2:88147873-88147892 | None:intergenic | 40.0% | |
| GTTGAAACAAGGTGAGATTG+TGG | + | chr3_2:88147981-88148000 | Msa0435130:CDS | 40.0% | |
| ATACTTACCAACTCCATACC+AGG | - | chr3_2:88148045-88148064 | None:intergenic | 40.0% | |
| CATGAATATCATCACGCACA+AGG | - | chr3_2:88148121-88148140 | None:intergenic | 40.0% | |
| ATGCAGGCCAAATTATGTGT+TGG | + | chr3_2:88148138-88148157 | Msa0435130:intron | 40.0% | |
| ACTCGGGATCAAGAAGAAAA+AGG | + | chr3_2:88148365-88148384 | Msa0435130:CDS | 40.0% | |
| AGAAACTGAGAAAGCTTGTG+TGG | - | chr3_2:88148439-88148458 | None:intergenic | 40.0% | |
| GCTTTCTCAGTTTCTTGAAG+AGG | + | chr3_2:88148444-88148463 | Msa0435130:CDS | 40.0% | |
| TATAAAAGTGGGAGACGAGA+AGG | - | chr3_2:88148583-88148602 | None:intergenic | 40.0% | |
| CAGTGATACCTATGTTCGTT+AGG | + | chr3_2:88148755-88148774 | Msa0435130:intron | 40.0% | |
| ACTACTTCCCTAACGAACAT+AGG | - | chr3_2:88148766-88148785 | None:intergenic | 40.0% | |
| AGTAGTAGCAAGTCCTAGAT+TGG | + | chr3_2:88148780-88148799 | Msa0435130:intron | 40.0% | |
| GATTCCTTAACTCTGGTTGA+AGG | + | chr3_2:88149162-88149181 | Msa0435130:intron | 40.0% | |
| GTGCTATAAAGCTCCAATCA+TGG | - | chr3_2:88149332-88149351 | None:intergenic | 40.0% | |
| TGCATGCCCTTCAATCAATA+TGG | - | chr3_2:88149813-88149832 | None:intergenic | 40.0% | |
| ! | TTCTCGTCTTTTCTCCCATT+TGG | + | chr3_2:88150143-88150162 | Msa0435130:intron | 40.0% |
| GCAGGCAAAATCAACCAAAT+GGG | - | chr3_2:88150160-88150179 | None:intergenic | 40.0% | |
| AGCAGGCAAAATCAACCAAA+TGG | - | chr3_2:88150161-88150180 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGGGAGTTAAGA+GGG | + | chr3_2:88150335-88150354 | Msa0435130:intron | 40.0% |
| GAGTTAAGAGGGTAAGGAAT+GGG | + | chr3_2:88150346-88150365 | Msa0435130:intron | 40.0% | |
| ! | GAGAATCCCTCATCTTGTTT+GGG | + | chr3_2:88150371-88150390 | Msa0435130:intron | 40.0% |
| !! | CTTGTTTGGGAGGTTGTTTT+TGG | + | chr3_2:88150384-88150403 | Msa0435130:intron | 40.0% |
| TGGGAACTCACAAATGCATT+TGG | - | chr3_2:88150513-88150532 | None:intergenic | 40.0% | |
| ATATGCTAGGTTTGCGTGTT+TGG | - | chr3_2:88150636-88150655 | None:intergenic | 40.0% | |
| ! | TCGACCACTGACATGTTTTT+AGG | + | chr3_2:88150742-88150761 | Msa0435130:intron | 40.0% |
| ACAGCCTAAAAACATGTCAG+TGG | - | chr3_2:88150749-88150768 | None:intergenic | 40.0% | |
| ATTTGGGAAGCAACTTGAAG+TGG | + | chr3_2:88150832-88150851 | Msa0435130:CDS | 40.0% | |
| ! | GAGGATGATTCAAGTTAGAG+TGG | + | chr3_2:88150854-88150873 | Msa0435130:exon | 40.0% |
| TTAGAGTGGCAGATTATTCC+TGG | + | chr3_2:88150868-88150887 | Msa0435130:exon | 40.0% | |
| TAAGCTTGATATCACCGTGT+TGG | + | chr3_2:88150894-88150913 | Msa0435130:intron | 40.0% | |
| ATAACTAACAGGAGTTGGCA+TGG | - | chr3_2:88150933-88150952 | None:intergenic | 40.0% | |
| CCTATTGTCATCCTAGTTGA+AGG | - | chr3_2:88151036-88151055 | None:intergenic | 40.0% | |
| CCTTCAACTAGGATGACAAT+AGG | + | chr3_2:88151033-88151052 | Msa0435130:three_prime_UTR | 40.0% | |
| TGGTAAACCATTCCTCTTGA+TGG | - | chr3_2:88151062-88151081 | None:intergenic | 40.0% | |
| ATCAGCAGTTGTTCAACAAG+TGG | - | chr3_2:88151082-88151101 | None:intergenic | 40.0% | |
| GAACAACTGCTGATCATGTA+TGG | + | chr3_2:88151088-88151107 | Msa0435130:three_prime_UTR | 40.0% | |
| ACTGCTGATCATGTATGGTT+CGG | + | chr3_2:88151093-88151112 | Msa0435130:three_prime_UTR | 40.0% | |
| CAAGGAAACAATGTGAATGC+TGG | - | chr3_2:88151127-88151146 | None:intergenic | 40.0% | |
| CAGCATTCACATTGTTTCCT+TGG | + | chr3_2:88151125-88151144 | Msa0435130:three_prime_UTR | 40.0% | |
| CCCATAGGTTTAGATCTTGA+AGG | + | chr3_2:88151151-88151170 | Msa0435130:three_prime_UTR | 40.0% | |
| GCCTTCAAGATCTAAACCTA+TGG | - | chr3_2:88151155-88151174 | None:intergenic | 40.0% | |
| ! | TTGAAGGCATACTCAGCAAT+AGG | + | chr3_2:88151167-88151186 | Msa0435130:three_prime_UTR | 40.0% |
| TACCAAGAGAGTTCGTCATT+AGG | + | chr3_2:88151346-88151365 | Msa0435130:three_prime_UTR | 40.0% | |
| AGTCAAGGAACTACTACTCA+TGG | - | chr3_2:88151380-88151399 | None:intergenic | 40.0% | |
| AGAATACAGTGGAAGAGGTG+CGG | - | chr3_2:88147292-88147311 | None:intergenic | 45.0% | |
| GGGGAAAAGGTAAGTTGCTT+TGG | - | chr3_2:88147330-88147349 | None:intergenic | 45.0% | |
| GCAGAAGGATAAAGGGGAAA+AGG | - | chr3_2:88147343-88147362 | None:intergenic | 45.0% | |
| AGGTGGAGCAGAAGGATAAA+GGG | - | chr3_2:88147350-88147369 | None:intergenic | 45.0% | |
| ATGCTGAGTGAGATGGAGTT+CGG | - | chr3_2:88147373-88147392 | None:intergenic | 45.0% | |
| TATCTGGATGCTGAGTGAGA+TGG | - | chr3_2:88147380-88147399 | None:intergenic | 45.0% | |
| TGAGTCTTCACTTCACTTGC+AGG | + | chr3_2:88147472-88147491 | Msa0435130:intron | 45.0% | |
| AAACCCGGTCTTTATCTCGT+TGG | + | chr3_2:88147530-88147549 | Msa0435130:CDS | 45.0% | |
| GTTCCAACGAGATAAAGACC+GGG | - | chr3_2:88147536-88147555 | None:intergenic | 45.0% | |
| TATCTCGTTGGAACACCCAT+CGG | + | chr3_2:88147542-88147561 | Msa0435130:CDS | 45.0% | |
| GGAAAAGGAAGAGGCTTACA+AGG | - | chr3_2:88147852-88147871 | None:intergenic | 45.0% | |
| GAAGTGGAAGGAAAAGGAAG+AGG | - | chr3_2:88147861-88147880 | None:intergenic | 45.0% | |
| ! | CTTCCTTTTCCTTCCACTTC+GGG | + | chr3_2:88147861-88147880 | Msa0435130:intron | 45.0% |
| TTTCCCGAAGTGGAAGGAAA+AGG | - | chr3_2:88147867-88147886 | None:intergenic | 45.0% | |
| AAAGGGAACAACTTGTGCTC+AGG | + | chr3_2:88147956-88147975 | Msa0435130:CDS | 45.0% | |
| ATACCAGGATCACTGATACC+AGG | - | chr3_2:88148030-88148049 | None:intergenic | 45.0% | |
| TGGTATCAGTGATCCTGGTA+TGG | + | chr3_2:88148029-88148048 | Msa0435130:CDS | 45.0% | |
| GTGCGTGATGATATTCATGC+AGG | + | chr3_2:88148122-88148141 | Msa0435130:intron | 45.0% | |
| ATACCAAAGCACATGGACCT+GGG | - | chr3_2:88148188-88148207 | None:intergenic | 45.0% | |
| AGGTCCATGTGCTTTGGTAT+CGG | + | chr3_2:88148188-88148207 | Msa0435130:CDS | 45.0% | |
| TTCATCAGTGGATAAACCCG+AGG | - | chr3_2:88148223-88148242 | None:intergenic | 45.0% | |
| AACTGACTGAACGATATGGG+CGG | + | chr3_2:88148259-88148278 | Msa0435130:intron | 45.0% | |
| !! | CGGTTTTCTTCCAAAGCACT+CGG | + | chr3_2:88148348-88148367 | Msa0435130:CDS | 45.0% |
| !! | GGTTTTCTTCCAAAGCACTC+GGG | + | chr3_2:88148349-88148368 | Msa0435130:CDS | 45.0% |
| AACTGAGAAAGCTTGTGTGG+AGG | - | chr3_2:88148436-88148455 | None:intergenic | 45.0% | |
| ! | GAAGAGGGTTCGCCAATTTT+CGG | + | chr3_2:88148460-88148479 | Msa0435130:CDS | 45.0% |
| ! | CGCCAATTTTCGGAGATACA+AGG | + | chr3_2:88148470-88148489 | Msa0435130:CDS | 45.0% |
| GGTATCACTGATGCAACTTG+TGG | - | chr3_2:88148745-88148764 | None:intergenic | 45.0% | |
| CTAAGGACCTTTATTCCCAC+TGG | - | chr3_2:88148995-88149014 | None:intergenic | 45.0% | |
| CATCCCTTCAACCAGAGTTA+AGG | - | chr3_2:88149169-88149188 | None:intergenic | 45.0% | |
| ! | TCTGGTTGAAGGGATGCTTT+TGG | + | chr3_2:88149173-88149192 | Msa0435130:intron | 45.0% |
| ! | CTGGTTGAAGGGATGCTTTT+GGG | + | chr3_2:88149174-88149193 | Msa0435130:intron | 45.0% |
| TCCATGATTGGGAGGTTATG+CGG | + | chr3_2:88149215-88149234 | Msa0435130:intron | 45.0% | |
| TTCTTGGGTCATGCCATGAT+TGG | + | chr3_2:88149316-88149335 | Msa0435130:intron | 45.0% | |
| TGGTGCAGTAACCGTAGTTA+AGG | - | chr3_2:88149372-88149391 | None:intergenic | 45.0% | |
| TCCTCAAGATTGGTGAAGCT+GGG | + | chr3_2:88149398-88149417 | Msa0435130:intron | 45.0% | |
| TATGTGCCCACACTTATGAC+AGG | - | chr3_2:88149612-88149631 | None:intergenic | 45.0% | |
| !!! | TAGTTTTGGCGCGGTACTTT+TGG | + | chr3_2:88149740-88149759 | Msa0435130:intron | 45.0% |
| TTCTCAAGCTCAATGTCCGA+TGG | - | chr3_2:88149854-88149873 | None:intergenic | 45.0% | |
| AAATGGCGAGAGTCTTTCCA+CGG | + | chr3_2:88149895-88149914 | Msa0435130:CDS | 45.0% | |
| CTATTGGGAAGCTATTACCG+TGG | - | chr3_2:88149915-88149934 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTGGGAGTTAAG+AGG | + | chr3_2:88150334-88150353 | Msa0435130:intron | 45.0% |
| GTTTGGGAGTTAAGAGGGTA+AGG | + | chr3_2:88150340-88150359 | Msa0435130:intron | 45.0% | |
| GGAGTTAAGAGGGTAAGGAA+TGG | + | chr3_2:88150345-88150364 | Msa0435130:intron | 45.0% | |
| TTAAGAGGGTAAGGAATGGG+AGG | + | chr3_2:88150349-88150368 | Msa0435130:intron | 45.0% | |
| GGAGAATCCCTCATCTTGTT+TGG | + | chr3_2:88150370-88150389 | Msa0435130:intron | 45.0% | |
| ! | AATCCCTCATCTTGTTTGGG+AGG | + | chr3_2:88150374-88150393 | Msa0435130:intron | 45.0% |
| CAACCTCCCAAACAAGATGA+GGG | - | chr3_2:88150380-88150399 | None:intergenic | 45.0% | |
| ACAACCTCCCAAACAAGATG+AGG | - | chr3_2:88150381-88150400 | None:intergenic | 45.0% | |
| ATAAAGGGAGGGAGACAAGA+TGG | + | chr3_2:88150458-88150477 | Msa0435130:intron | 45.0% | |
| AGGAGAAAGAGAGGAGGAAA+GGG | - | chr3_2:88150604-88150623 | None:intergenic | 45.0% | |
| !! | AGAGCTTTGAGGAGAAAGAG+AGG | - | chr3_2:88150613-88150632 | None:intergenic | 45.0% |
| TCACTTGCGTTGCGGAAATT+TGG | + | chr3_2:88150815-88150834 | Msa0435130:CDS | 45.0% | |
| CACTTGCGTTGCGGAAATTT+GGG | + | chr3_2:88150816-88150835 | Msa0435130:CDS | 45.0% | |
| GTGATATCAAGCTTACCTCC+AGG | - | chr3_2:88150889-88150908 | None:intergenic | 45.0% | |
| GACAATAGGCTTCCATCAAG+AGG | + | chr3_2:88151047-88151066 | Msa0435130:three_prime_UTR | 45.0% | |
| TAGGCTTCCATCAAGAGGAA+TGG | + | chr3_2:88151052-88151071 | Msa0435130:three_prime_UTR | 45.0% | |
| !! | CTGATCATGTATGGTTCGGT+TGG | + | chr3_2:88151097-88151116 | Msa0435130:three_prime_UTR | 45.0% |
| TTGTTTCCTTGGCTTCCCAT+AGG | + | chr3_2:88151136-88151155 | Msa0435130:three_prime_UTR | 45.0% | |
| TCTAAACCTATGGGAAGCCA+AGG | - | chr3_2:88151145-88151164 | None:intergenic | 45.0% | |
| TGAATACAAGACGAGGGAGA+TGG | - | chr3_2:88151302-88151321 | None:intergenic | 45.0% | |
| CTGGGATGAATACAAGACGA+GGG | - | chr3_2:88151308-88151327 | None:intergenic | 45.0% | |
| ! | TCTGGGATGAATACAAGACG+AGG | - | chr3_2:88151309-88151328 | None:intergenic | 45.0% |
| CACCTAATGACGAACTCTCT+TGG | - | chr3_2:88151351-88151370 | None:intergenic | 45.0% | |
| GGTGGAGCAGAAGGATAAAG+GGG | - | chr3_2:88147349-88147368 | None:intergenic | 50.0% | |
| GAGGTGGAGCAGAAGGATAA+AGG | - | chr3_2:88147351-88147370 | None:intergenic | 50.0% | |
| GTGCTCAGGAGGTTGAAACA+AGG | + | chr3_2:88147970-88147989 | Msa0435130:CDS | 50.0% | |
| GTGGCACTTATAAGTGACGC+TGG | + | chr3_2:88148000-88148019 | Msa0435130:CDS | 50.0% | |
| CAGTGATCCTGGTATGGAGT+TGG | + | chr3_2:88148035-88148054 | Msa0435130:CDS | 50.0% | |
| GTTCCTGTTGTTCCAATCCC+AGG | + | chr3_2:88148168-88148187 | Msa0435130:CDS | 50.0% | |
| AAAGCACATGGACCTGGGAT+TGG | - | chr3_2:88148183-88148202 | None:intergenic | 50.0% | |
| AATCCCAGGTCCATGTGCTT+TGG | + | chr3_2:88148182-88148201 | Msa0435130:CDS | 50.0% | |
| GATACCAAAGCACATGGACC+TGG | - | chr3_2:88148189-88148208 | None:intergenic | 50.0% | |
| AGAGCCGATACCAAAGCACA+TGG | - | chr3_2:88148195-88148214 | None:intergenic | 50.0% | |
| CTTCTTGATCCCGAGTGCTT+TGG | - | chr3_2:88148361-88148380 | None:intergenic | 50.0% | |
| CATGGCTTCAGCAGAGCAAA+CGG | + | chr3_2:88148390-88148409 | Msa0435130:CDS | 50.0% | |
| ACCATGCCTCTCCTCAAGAT+TGG | + | chr3_2:88149388-88149407 | Msa0435130:intron | 50.0% | |
| ACCAATCTTGAGGAGAGGCA+TGG | - | chr3_2:88149392-88149411 | None:intergenic | 50.0% | |
| GCTTCACCAATCTTGAGGAG+AGG | - | chr3_2:88149397-88149416 | None:intergenic | 50.0% | |
| CTCCTCAAGATTGGTGAAGC+TGG | + | chr3_2:88149397-88149416 | Msa0435130:intron | 50.0% | |
| CCTCAAGATTGGTGAAGCTG+GGG | + | chr3_2:88149399-88149418 | Msa0435130:intron | 50.0% | |
| TCAAGCTCAATGTCCGATGG+AGG | - | chr3_2:88149851-88149870 | None:intergenic | 50.0% | |
| !!! | AGGTTGTTTTTGGAGCGAGG+TGG | + | chr3_2:88150394-88150413 | Msa0435130:intron | 50.0% |
| !!! | TTGTTTTTGGAGCGAGGTGG+AGG | + | chr3_2:88150397-88150416 | Msa0435130:intron | 50.0% |
| AAAGAGAGGAGGAAAGGGGA+AGG | - | chr3_2:88150599-88150618 | None:intergenic | 50.0% | |
| GGAGAAAGAGAGGAGGAAAG+GGG | - | chr3_2:88150603-88150622 | None:intergenic | 50.0% | |
| GAGGAGAAAGAGAGGAGGAA+AGG | - | chr3_2:88150605-88150624 | None:intergenic | 50.0% | |
| !! | GCTTTGAGGAGAAAGAGAGG+AGG | - | chr3_2:88150610-88150629 | None:intergenic | 50.0% |
| TGCGTGTTTGGAGAGCTTTG+AGG | - | chr3_2:88150624-88150643 | None:intergenic | 50.0% | |
| TGGGAAGCAACTTGAAGTGG+AGG | + | chr3_2:88150835-88150854 | Msa0435130:CDS | 50.0% | |
| GAGTGGCAGATTATTCCTGG+AGG | + | chr3_2:88150871-88150890 | Msa0435130:exon | 50.0% | |
| GTGCTGGGGAAAGAACATCT+GGG | - | chr3_2:88151326-88151345 | None:intergenic | 50.0% | |
| ! | AGTGCTGGGGAAAGAACATC+TGG | - | chr3_2:88151327-88151346 | None:intergenic | 50.0% |
| !! | GAACTCTCTTGGTAGTGCTG+GGG | - | chr3_2:88151340-88151359 | None:intergenic | 50.0% |
| !! | CGAACTCTCTTGGTAGTGCT+GGG | - | chr3_2:88151341-88151360 | None:intergenic | 50.0% |
| !! | ACGAACTCTCTTGGTAGTGC+TGG | - | chr3_2:88151342-88151361 | None:intergenic | 50.0% |
| ! | ATAGGGGAGTTGAGGCGTTC+TGG | + | chr3_2:88147150-88147169 | Msa0435130:five_prime_UTR | 55.0% |
| ! | TGTTGCTTCGGCGATTACCC+TGG | + | chr3_2:88147250-88147269 | Msa0435130:CDS | 55.0% |
| GCAGTGGAAAACGCCATCCA+GGG | - | chr3_2:88147270-88147289 | None:intergenic | 55.0% | |
| AGTGAGATGGAGTTCGGAGG+TGG | - | chr3_2:88147367-88147386 | None:intergenic | 55.0% | |
| CTGAGTGAGATGGAGTTCGG+AGG | - | chr3_2:88147370-88147389 | None:intergenic | 55.0% | |
| CACCATTGTTCAGGGCTCTC+CGG | + | chr3_2:88147743-88147762 | Msa0435130:intron | 55.0% | |
| ACCATTGTTCAGGGCTCTCC+GGG | + | chr3_2:88147744-88147763 | Msa0435130:intron | 55.0% | |
| CATCAGCGGAGTTCAACACC+CGG | - | chr3_2:88147765-88147784 | None:intergenic | 55.0% | |
| GGGAACAACTTGTGCTCAGG+AGG | + | chr3_2:88147959-88147978 | Msa0435130:CDS | 55.0% | |
| ATAAGTGACGCTGGAACGCC+TGG | + | chr3_2:88148009-88148028 | Msa0435130:CDS | 55.0% | |
| ACGCCTGGTATCAGTGATCC+TGG | + | chr3_2:88148024-88148043 | Msa0435130:CDS | 55.0% | |
| GGACCTGGGATTGGAACAAC+AGG | - | chr3_2:88148174-88148193 | None:intergenic | 55.0% | |
| !! | GGTATCGGCTCTTTCTGCCT+CGG | + | chr3_2:88148203-88148222 | Msa0435130:CDS | 55.0% |
| !! | GTATCGGCTCTTTCTGCCTC+GGG | + | chr3_2:88148204-88148223 | Msa0435130:CDS | 55.0% |
| GCCGCATAACCTCCCAATCA+TGG | - | chr3_2:88149219-88149238 | None:intergenic | 55.0% | |
| CCCCAGCTTCACCAATCTTG+AGG | - | chr3_2:88149402-88149421 | None:intergenic | 55.0% | |
| !!! | GGGAGGTTGTTTTTGGAGCG+AGG | + | chr3_2:88150391-88150410 | Msa0435130:intron | 55.0% |
| GTAGTCTCCCACCTTGCATG+AGG | - | chr3_2:88150572-88150591 | None:intergenic | 55.0% | |
| GCTTCGGCGATTACCCTGGA+TGG | + | chr3_2:88147254-88147273 | Msa0435130:CDS | 60.0% | |
| GGCAGTGGAAAACGCCATCC+AGG | - | chr3_2:88147271-88147290 | None:intergenic | 60.0% | |
| GAGTTCGGAGGTGGAGCAGA+AGG | - | chr3_2:88147358-88147377 | None:intergenic | 60.0% | |
| CGCTCGCAGCATCTCAAACC+CGG | + | chr3_2:88147515-88147534 | Msa0435130:CDS | 60.0% | |
| ACCCGGAGAGCCCTGAACAA+TGG | - | chr3_2:88147748-88147767 | None:intergenic | 60.0% | |
| ! | TCGGAAGACACGAGGCACTC+TGG | + | chr3_2:88147793-88147812 | Msa0435130:CDS | 60.0% |
| ! | CGGAAGACACGAGGCACTCT+GGG | + | chr3_2:88147794-88147813 | Msa0435130:CDS | 60.0% |
| ! | CAGTGGAAGAGGTGCGGCAG+TGG | - | chr3_2:88147286-88147305 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 88147118 | 88151486 | 88147118 | ID=Msa0435130;Name=Msa0435130 |
| chr3_2 | mRNA | 88147118 | 88151486 | 88147118 | ID=Msa0435130-mRNA-1;Parent=Msa0435130;Name=Msa0435130-mRNA-1;_AED=0.11;_eAED=0.11;_QI=131|1|1|1|0.88|0.8|10|518|353 |
| chr3_2 | exon | 88147118 | 88147410 | 88147118 | ID=Msa0435130-mRNA-1:exon:25857;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88147494 | 88147588 | 88147494 | ID=Msa0435130-mRNA-1:exon:25858;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88147756 | 88147852 | 88147756 | ID=Msa0435130-mRNA-1:exon:25859;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88147928 | 88148056 | 88147928 | ID=Msa0435130-mRNA-1:exon:25860;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88148144 | 88148252 | 88148144 | ID=Msa0435130-mRNA-1:exon:25861;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88148347 | 88148491 | 88148347 | ID=Msa0435130-mRNA-1:exon:25862;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88148831 | 88148873 | 88148831 | ID=Msa0435130-mRNA-1:exon:25863;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88149743 | 88149916 | 88149743 | ID=Msa0435130-mRNA-1:exon:25864;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88150764 | 88150892 | 88150764 | ID=Msa0435130-mRNA-1:exon:25865;Parent=Msa0435130-mRNA-1 |
| chr3_2 | exon | 88150990 | 88151486 | 88150990 | ID=Msa0435130-mRNA-1:exon:25866;Parent=Msa0435130-mRNA-1 |
| chr3_2 | five_prime_UTR | 88147118 | 88147248 | 88147118 | ID=Msa0435130-mRNA-1:five_prime_utr;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88147249 | 88147410 | 88147249 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88147494 | 88147588 | 88147494 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88147756 | 88147852 | 88147756 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88147928 | 88148056 | 88147928 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88148144 | 88148252 | 88148144 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88148347 | 88148491 | 88148347 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88148831 | 88148873 | 88148831 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88149743 | 88149916 | 88149743 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | CDS | 88150764 | 88150871 | 88150764 | ID=Msa0435130-mRNA-1:cds;Parent=Msa0435130-mRNA-1 |
| chr3_2 | three_prime_UTR | 88150872 | 88150892 | 88150872 | ID=Msa0435130-mRNA-1:three_prime_utr;Parent=Msa0435130-mRNA-1 |
| chr3_2 | three_prime_UTR | 88150990 | 88151486 | 88150990 | ID=Msa0435130-mRNA-1:three_prime_utr;Parent=Msa0435130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
