Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029310 | XP_003590733.2 | 97.500 | 120 | 3 | 0 | 1 | 120 | 1 | 120 | 3.53e-80 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0029310 | 0.820192 | 7.811306e-53 | -8.615850e-47 |
| Msa0006070 | Msa0029310 | 0.812345 | 4.442283e-51 | -8.615850e-47 |
| Msa0006110 | Msa0029310 | 0.826298 | 2.929979e-54 | -8.615850e-47 |
| Msa0011660 | Msa0029310 | -0.817713 | 2.859105e-52 | -8.615850e-47 |
| Msa0015390 | Msa0029310 | 0.819926 | 8.984537e-53 | -8.615850e-47 |
| Msa0017510 | Msa0029310 | 0.821223 | 4.527188e-53 | -8.615850e-47 |
| Msa0028640 | Msa0029310 | 0.808551 | 2.929817e-50 | -8.615850e-47 |
| Msa0029310 | Msa0032110 | 0.803379 | 3.584991e-49 | -8.615850e-47 |
| Msa0029310 | Msa0050390 | 0.819387 | 1.193033e-52 | -8.615850e-47 |
| Msa0029310 | Msa0052730 | 0.801128 | 1.042109e-48 | -8.615850e-47 |
| Msa0029310 | Msa0054480 | 0.810341 | 1.209472e-50 | -8.615850e-47 |
| Msa0029310 | Msa0063890 | 0.811294 | 7.525058e-51 | -8.615850e-47 |
| Msa0029310 | Msa0078900 | 0.806034 | 1.000392e-49 | -8.615850e-47 |
| Msa0029310 | Msa0079380 | 0.804808 | 1.808503e-49 | -8.615850e-47 |
| Msa0029310 | Msa0089630 | 0.829613 | 4.666931e-55 | -8.615850e-47 |
| Msa0029310 | Msa0101440 | 0.813764 | 2.170254e-51 | -8.615850e-47 |
| Msa0029310 | Msa0101700 | 0.805055 | 1.605951e-49 | -8.615850e-47 |
| Msa0029310 | Msa0114060 | 0.820303 | 7.365489e-53 | -8.615850e-47 |
| Msa0029310 | Msa0115270 | 0.808158 | 3.552615e-50 | -8.615850e-47 |
| Msa0029310 | Msa0124060 | 0.808178 | 3.518391e-50 | -8.615850e-47 |
| Msa0029310 | Msa0136070 | 0.807159 | 5.790951e-50 | -8.615850e-47 |
| Msa0029310 | Msa0145440 | 0.810752 | 9.857162e-51 | -8.615850e-47 |
| Msa0029310 | Msa0157290 | 0.822200 | 2.690528e-53 | -8.615850e-47 |
| Msa0029310 | Msa0165210 | 0.807166 | 5.772988e-50 | -8.615850e-47 |
| Msa0029310 | Msa0166560 | 0.802718 | 4.910623e-49 | -8.615850e-47 |
| Msa0029310 | Msa0168500 | 0.815694 | 8.106721e-52 | -8.615850e-47 |
| Msa0029310 | Msa0171540 | 0.815278 | 1.003629e-51 | -8.615850e-47 |
| Msa0029310 | Msa0173990 | 0.803095 | 4.105074e-49 | -8.615850e-47 |
| Msa0029310 | Msa0175780 | 0.804888 | 1.740342e-49 | -8.615850e-47 |
| Msa0029310 | Msa0195980 | 0.822558 | 2.220947e-53 | -8.615850e-47 |
| Msa0029310 | Msa0197660 | 0.803962 | 2.713202e-49 | -8.615850e-47 |
| Msa0029310 | Msa0211150 | 0.839261 | 1.761657e-57 | -8.615850e-47 |
| Msa0029310 | Msa0212990 | 0.803019 | 4.257087e-49 | -8.615850e-47 |
| Msa0029310 | Msa0218810 | 0.801104 | 1.053842e-48 | -8.615850e-47 |
| Msa0029310 | Msa0220740 | 0.805683 | 1.186124e-49 | -8.615850e-47 |
| Msa0029310 | Msa0223690 | 0.804543 | 2.053957e-49 | -8.615850e-47 |
| Msa0029310 | Msa0224780 | 0.810820 | 9.532274e-51 | -8.615850e-47 |
| Msa0029310 | Msa0244860 | 0.808644 | 2.798896e-50 | -8.615850e-47 |
| Msa0029310 | Msa0254790 | 0.808552 | 2.927622e-50 | -8.615850e-47 |
| Msa0029310 | Msa0259500 | 0.802632 | 5.116395e-49 | -8.615850e-47 |
| Msa0029310 | Msa0260680 | 0.807232 | 5.589572e-50 | -8.615850e-47 |
| Msa0029310 | Msa0261340 | 0.816346 | 5.799333e-52 | -8.615850e-47 |
| Msa0029310 | Msa0262510 | 0.807529 | 4.833697e-50 | -8.615850e-47 |
| Msa0029310 | Msa0264150 | 0.836741 | 7.835732e-57 | -8.615850e-47 |
| Msa0029310 | Msa0279790 | 0.815554 | 8.709740e-52 | -8.615850e-47 |
| Msa0029310 | Msa0283450 | 0.806396 | 8.394287e-50 | -8.615850e-47 |
| Msa0029310 | Msa0300690 | 0.813469 | 2.519376e-51 | -8.615850e-47 |
| Msa0029310 | Msa0304510 | 0.844597 | 6.851506e-59 | -8.615850e-47 |
| Msa0029310 | Msa0306210 | -0.808559 | 2.918800e-50 | -8.615850e-47 |
| Msa0029310 | Msa0316910 | 0.814592 | 1.424517e-51 | -8.615850e-47 |
| Msa0029310 | Msa0317510 | 0.809910 | 1.497705e-50 | -8.615850e-47 |
| Msa0029310 | Msa0319170 | 0.802695 | 4.966136e-49 | -8.615850e-47 |
| Msa0029310 | Msa0330340 | 0.805877 | 1.079576e-49 | -8.615850e-47 |
| Msa0029310 | Msa0332000 | 0.804446 | 2.151988e-49 | -8.615850e-47 |
| Msa0029310 | Msa0337620 | 0.805782 | 1.130627e-49 | -8.615850e-47 |
| Msa0029310 | Msa0339250 | 0.806463 | 8.127132e-50 | -8.615850e-47 |
| Msa0029310 | Msa0340450 | 0.822142 | 2.775068e-53 | -8.615850e-47 |
| Msa0029310 | Msa0341540 | 0.807653 | 4.550695e-50 | -8.615850e-47 |
| Msa0029310 | Msa0342310 | 0.802150 | 6.431688e-49 | -8.615850e-47 |
| Msa0029310 | Msa0345970 | 0.803906 | 2.787213e-49 | -8.615850e-47 |
| Msa0029310 | Msa0350990 | 0.818712 | 1.699048e-52 | -8.615850e-47 |
| Msa0029310 | Msa0351030 | 0.813687 | 2.256360e-51 | -8.615850e-47 |
| Msa0029310 | Msa0351100 | 0.811392 | 7.165557e-51 | -8.615850e-47 |
| Msa0029310 | Msa0376350 | 0.804260 | 2.352563e-49 | -8.615850e-47 |
| Msa0029310 | Msa0388960 | 0.830714 | 2.513021e-55 | -8.615850e-47 |
| Msa0029310 | Msa0390400 | -0.855208 | 7.360402e-62 | -8.615850e-47 |
| Msa0029310 | Msa0392510 | 0.801294 | 9.637071e-49 | -8.615850e-47 |
| Msa0029310 | Msa0393080 | 0.812729 | 3.662526e-51 | -8.615850e-47 |
| Msa0029310 | Msa0395790 | 0.813480 | 2.505417e-51 | -8.615850e-47 |
| Msa0029310 | Msa0406770 | 0.800057 | 1.722777e-48 | -8.615850e-47 |
| Msa0029310 | Msa0410650 | 0.837874 | 4.017584e-57 | -8.615850e-47 |
| Msa0029310 | Msa0419820 | 0.804873 | 1.752740e-49 | -8.615850e-47 |
| Msa0029310 | Msa0422850 | 0.839551 | 1.481114e-57 | -8.615850e-47 |
| Msa0029310 | Msa0422930 | 0.841755 | 3.920418e-58 | -8.615850e-47 |
| Msa0029310 | Msa0424790 | 0.803310 | 3.704945e-49 | -8.615850e-47 |
| Msa0029310 | Msa0428080 | 0.828195 | 1.029067e-54 | -8.615850e-47 |
| Msa0029310 | Msa0435390 | 0.811147 | 8.096894e-51 | -8.615850e-47 |
| Msa0029310 | Msa0435400 | 0.803581 | 3.256269e-49 | -8.615850e-47 |
| Msa0029310 | Msa0436760 | 0.806374 | 8.486527e-50 | -8.615850e-47 |
| Msa0029310 | Msa0440750 | 0.825307 | 5.034157e-54 | -8.615850e-47 |
| Msa0029310 | Msa0464680 | 0.836280 | 1.026582e-56 | -8.615850e-47 |
| Msa0029310 | Msa0466390 | 0.824035 | 1.003808e-53 | -8.615850e-47 |
| Msa0029310 | Msa0479170 | 0.822611 | 2.158744e-53 | -8.615850e-47 |
| Msa0029310 | Msa0479660 | 0.802745 | 4.850073e-49 | -8.615850e-47 |
| Msa0029310 | Msa0483850 | 0.816782 | 4.630734e-52 | -8.615850e-47 |
| Msa0029310 | Msa0484780 | 0.809234 | 2.092615e-50 | -8.615850e-47 |
| Msa0029310 | Msa0495320 | 0.826980 | 2.014135e-54 | -8.615850e-47 |
| Msa0029310 | Msa0495330 | 0.818042 | 2.409468e-52 | -8.615850e-47 |
| Msa0029310 | Msa0504480 | 0.803533 | 3.331265e-49 | -8.615850e-47 |
| Msa0029310 | Msa0506670 | 0.809194 | 2.134486e-50 | -8.615850e-47 |
| Msa0029310 | Msa0507680 | 0.825506 | 4.517855e-54 | -8.615850e-47 |
| Msa0029310 | Msa0512750 | 0.808598 | 2.862697e-50 | -8.615850e-47 |
| Msa0029310 | Msa0529040 | 0.809997 | 1.435111e-50 | -8.615850e-47 |
| Msa0029310 | Msa0529890 | 0.819658 | 1.034871e-52 | -8.615850e-47 |
| Msa0029310 | Msa0546680 | 0.804409 | 2.190953e-49 | -8.615850e-47 |
| Msa0029310 | Msa0547890 | 0.805807 | 1.116648e-49 | -8.615850e-47 |
| Msa0029310 | Msa0562440 | 0.800135 | 1.660722e-48 | -8.615850e-47 |
| Msa0029310 | Msa0569200 | 0.801353 | 9.370996e-49 | -8.615850e-47 |
| Msa0029310 | Msa0574890 | 0.811305 | 7.481137e-51 | -8.615850e-47 |
| Msa0029310 | Msa0585560 | 0.808672 | 2.760585e-50 | -8.615850e-47 |
| Msa0029310 | Msa0602240 | 0.810732 | 9.958841e-51 | -8.615850e-47 |
| Msa0029310 | Msa0602250 | 0.811570 | 6.553027e-51 | -8.615850e-47 |
| Msa0029310 | Msa0610430 | 0.818851 | 1.579969e-52 | -8.615850e-47 |
| Msa0029310 | Msa0623080 | 0.809716 | 1.649080e-50 | -8.615850e-47 |
| Msa0029310 | Msa0625720 | 0.815057 | 1.123278e-51 | -8.615850e-47 |
| Msa0029310 | Msa0634730 | 0.801952 | 7.061427e-49 | -8.615850e-47 |
| Msa0029310 | Msa0638070 | 0.804328 | 2.277531e-49 | -8.615850e-47 |
| Msa0029310 | Msa0661190 | -0.800330 | 1.516350e-48 | -8.615850e-47 |
| Msa0029310 | Msa0661650 | 0.812240 | 4.682258e-51 | -8.615850e-47 |
| Msa0029310 | Msa0663390 | 0.815796 | 7.694811e-52 | -8.615850e-47 |
| Msa0029310 | Msa0669320 | 0.810198 | 1.298749e-50 | -8.615850e-47 |
| Msa0029310 | Msa0673460 | 0.809561 | 1.780777e-50 | -8.615850e-47 |
| Msa0029310 | Msa0677410 | 0.832828 | 7.564755e-56 | -8.615850e-47 |
| Msa0029310 | Msa0679290 | -0.805892 | 1.071622e-49 | -8.615850e-47 |
| Msa0029310 | Msa0682330 | 0.808568 | 2.905907e-50 | -8.615850e-47 |
| Msa0029310 | Msa0696450 | 0.805695 | 1.178799e-49 | -8.615850e-47 |
| Msa0029310 | Msa0698920 | 0.811659 | 6.268141e-51 | -8.615850e-47 |
| Msa0029310 | Msa0729720 | 0.814676 | 1.364761e-51 | -8.615850e-47 |
| Msa0029310 | Msa0730430 | 0.804942 | 1.695521e-49 | -8.615850e-47 |
| Msa0029310 | Msa0731940 | 0.827208 | 1.775660e-54 | -8.615850e-47 |
| Msa0029310 | Msa0735170 | 0.833299 | 5.774710e-56 | -8.615850e-47 |
| Msa0029310 | Msa0740510 | 0.804852 | 1.770857e-49 | -8.615850e-47 |
| Msa0029310 | Msa0741840 | 0.802558 | 5.298257e-49 | -8.615850e-47 |
| Msa0029310 | Msa0743720 | 0.822538 | 2.244878e-53 | -8.615850e-47 |
| Msa0029310 | Msa0744040 | 0.806483 | 8.049389e-50 | -8.615850e-47 |
| Msa0029310 | Msa0745790 | 0.814249 | 1.696136e-51 | -8.615850e-47 |
| Msa0029310 | Msa0762970 | 0.801691 | 7.989481e-49 | -8.615850e-47 |
| Msa0029310 | Msa0790660 | -0.804244 | 2.371307e-49 | -8.615850e-47 |
| Msa0029310 | Msa0793800 | 0.802156 | 6.411573e-49 | -8.615850e-47 |
| Msa0029310 | Msa0808270 | 0.812970 | 3.242554e-51 | -8.615850e-47 |
| Msa0029310 | Msa0810220 | 0.819353 | 1.214449e-52 | -8.615850e-47 |
| Msa0029310 | Msa0820770 | 0.810815 | 9.552359e-51 | -8.615850e-47 |
| Msa0029310 | Msa0821190 | 0.801552 | 8.533706e-49 | -8.615850e-47 |
| Msa0029310 | Msa0832340 | 0.808245 | 3.405745e-50 | -8.615850e-47 |
| Msa0029310 | Msa0835800 | 0.803503 | 3.380219e-49 | -8.615850e-47 |
| Msa0029310 | Msa0842790 | 0.810558 | 1.085947e-50 | -8.615850e-47 |
| Msa0029310 | Msa0844490 | 0.807064 | 6.066882e-50 | -8.615850e-47 |
| Msa0029310 | Msa0844570 | 0.822124 | 2.801699e-53 | -8.615850e-47 |
| Msa0029310 | Msa0850960 | 0.802300 | 5.988607e-49 | -8.615850e-47 |
| Msa0029310 | Msa0861090 | 0.811255 | 7.672453e-51 | -8.615850e-47 |
| Msa0029310 | Msa0861870 | 0.815244 | 1.021164e-51 | -8.615850e-47 |
| Msa0029310 | Msa0871270 | 0.826472 | 2.662542e-54 | -8.615850e-47 |
| Msa0029310 | Msa0875290 | 0.815591 | 8.548326e-52 | -8.615850e-47 |
| Msa0029310 | Msa0876190 | 0.869771 | 2.411495e-66 | -8.615850e-47 |
| Msa0029310 | Msa0876200 | 0.819570 | 1.083758e-52 | -8.615850e-47 |
| Msa0029310 | Msa0876580 | 0.812550 | 4.007141e-51 | -8.615850e-47 |
| Msa0029310 | Msa0880140 | 0.815970 | 7.034622e-52 | -8.615850e-47 |
| Msa0029310 | Msa0893950 | 0.831930 | 1.262712e-55 | -8.615850e-47 |
| Msa0029310 | Msa0896750 | 0.823837 | 1.117148e-53 | -8.615850e-47 |
| Msa0029310 | Msa0897330 | 0.811831 | 5.749324e-51 | -8.615850e-47 |
| Msa0029310 | Msa0898670 | 0.800444 | 1.437355e-48 | -8.615850e-47 |
| Msa0029310 | Msa0923010 | 0.806906 | 6.550477e-50 | -8.615850e-47 |
| Msa0029310 | Msa0926890 | 0.810152 | 1.328690e-50 | -8.615850e-47 |
| Msa0029310 | Msa0936300 | 0.801905 | 7.222997e-49 | -8.615850e-47 |
| Msa0029310 | Msa0936390 | 0.809208 | 2.119786e-50 | -8.615850e-47 |
| Msa0029310 | Msa0938220 | 0.833867 | 4.166510e-56 | -8.615850e-47 |
| Msa0029310 | Msa0947660 | 0.811013 | 8.655873e-51 | -8.615850e-47 |
| Msa0029310 | Msa0953120 | 0.813142 | 2.972629e-51 | -8.615850e-47 |
| Msa0029310 | Msa0969450 | 0.802221 | 6.217548e-49 | -8.615850e-47 |
| Msa0029310 | Msa0969520 | 0.833277 | 5.848326e-56 | -8.615850e-47 |
| Msa0029310 | Msa0969810 | 0.802655 | 5.059816e-49 | -8.615850e-47 |
| Msa0029310 | Msa0974080 | 0.800176 | 1.629566e-48 | -8.615850e-47 |
| Msa0029310 | Msa0975340 | 0.800268 | 1.560426e-48 | -8.615850e-47 |
| Msa0029310 | Msa0980880 | 0.811454 | 6.946003e-51 | -8.615850e-47 |
| Msa0029310 | Msa0993290 | 0.810694 | 1.014827e-50 | -8.615850e-47 |
| Msa0029310 | Msa0993600 | 0.813293 | 2.754654e-51 | -8.615850e-47 |
| Msa0029310 | Msa1002000 | 0.804402 | 2.197983e-49 | -8.615850e-47 |
| Msa0029310 | Msa1003620 | 0.807128 | 5.881067e-50 | -8.615850e-47 |
| Msa0029310 | Msa1013400 | 0.803609 | 3.212923e-49 | -8.615850e-47 |
| Msa0029310 | Msa1014540 | 0.828240 | 1.003685e-54 | -8.615850e-47 |
| Msa0029310 | Msa1016320 | 0.808844 | 2.536732e-50 | -8.615850e-47 |
| Msa0029310 | Msa1019000 | 0.817176 | 3.777096e-52 | -8.615850e-47 |
| Msa0029310 | Msa1046460 | 0.802449 | 5.580596e-49 | -8.615850e-47 |
| Msa0029310 | Msa1048160 | 0.806570 | 7.715663e-50 | -8.615850e-47 |
| Msa0029310 | Msa1079590 | 0.831473 | 1.636467e-55 | -8.615850e-47 |
| Msa0029310 | Msa1082500 | 0.826209 | 3.075425e-54 | -8.615850e-47 |
| Msa0029310 | Msa1085200 | 0.838139 | 3.434387e-57 | -8.615850e-47 |
| Msa0029310 | Msa1093530 | 0.800508 | 1.394333e-48 | -8.615850e-47 |
| Msa0029310 | Msa1100050 | 0.839538 | 1.492444e-57 | -8.615850e-47 |
| Msa0029310 | Msa1106700 | 0.834635 | 2.674687e-56 | -8.615850e-47 |
| Msa0029310 | Msa1109680 | 0.802063 | 6.701395e-49 | -8.615850e-47 |
| Msa0029310 | Msa1113170 | 0.801807 | 7.564127e-49 | -8.615850e-47 |
| Msa0029310 | Msa1119480 | 0.812617 | 3.873326e-51 | -8.615850e-47 |
| Msa0029310 | Msa1121490 | 0.812902 | 3.355204e-51 | -8.615850e-47 |
| Msa0029310 | Msa1131220 | 0.812941 | 3.291135e-51 | -8.615850e-47 |
| Msa0029310 | Msa1135470 | 0.854747 | 1.001689e-61 | -8.615850e-47 |
| Msa0029310 | Msa1137570 | 0.838599 | 2.612967e-57 | -8.615850e-47 |
| Msa0029310 | Msa1139890 | 0.811309 | 7.467825e-51 | -8.615850e-47 |
| Msa0029310 | Msa1147900 | 0.812896 | 3.366686e-51 | -8.615850e-47 |
| Msa0029310 | Msa1154280 | 0.808191 | 3.496173e-50 | -8.615850e-47 |
| Msa0029310 | Msa1168160 | 0.834221 | 3.398212e-56 | -8.615850e-47 |
| Msa0029310 | Msa1174040 | 0.804469 | 2.128310e-49 | -8.615850e-47 |
| Msa0029310 | Msa1178180 | 0.803710 | 3.061207e-49 | -8.615850e-47 |
| Msa0029310 | Msa1186950 | -0.813685 | 2.258877e-51 | -8.615850e-47 |
| Msa0029310 | Msa1189070 | 0.806089 | 9.741329e-50 | -8.615850e-47 |
| Msa0029310 | Msa1193290 | 0.830302 | 3.170855e-55 | -8.615850e-47 |
| Msa0029310 | Msa1196440 | 0.810704 | 1.009991e-50 | -8.615850e-47 |
| Msa0029310 | Msa1199570 | 0.813894 | 2.031873e-51 | -8.615850e-47 |
| Msa0029310 | Msa1204530 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0029310 | Msa1210020 | 0.801224 | 9.960299e-49 | -8.615850e-47 |
| Msa0029310 | Msa1212940 | 0.806067 | 9.848174e-50 | -8.615850e-47 |
| Msa0029310 | Msa1227740 | 0.805159 | 1.527395e-49 | -8.615850e-47 |
| Msa0029310 | Msa1228590 | 0.801890 | 7.272440e-49 | -8.615850e-47 |
| Msa0029310 | Msa1238930 | 0.811107 | 8.261258e-51 | -8.615850e-47 |
| Msa0029310 | Msa1239920 | 0.819697 | 1.013384e-52 | -8.615850e-47 |
| Msa0029310 | Msa1244250 | 0.819675 | 1.025558e-52 | -8.615850e-47 |
| Msa0029310 | Msa1274520 | 0.821312 | 4.316184e-53 | -8.615850e-47 |
| Msa0029310 | Msa1282580 | -0.809906 | 1.501186e-50 | -8.615850e-47 |
| Msa0029310 | Msa1284550 | 0.820073 | 8.314780e-53 | -8.615850e-47 |
| Msa0029310 | Msa1284680 | 0.803030 | 4.234190e-49 | -8.615850e-47 |
| Msa0029310 | Msa1302830 | 0.813065 | 3.091276e-51 | -8.615850e-47 |
| Msa0029310 | Msa1305340 | 0.803286 | 3.747577e-49 | -8.615850e-47 |
| Msa0029310 | Msa1308380 | 0.804132 | 2.501561e-49 | -8.615850e-47 |
| Msa0029310 | Msa1313150 | 0.820168 | 7.910685e-53 | -8.615850e-47 |
| Msa0029310 | Msa1314170 | 0.803375 | 3.592136e-49 | -8.615850e-47 |
| Msa0029310 | Msa1320410 | 0.837557 | 4.845583e-57 | -8.615850e-47 |
| Msa0029310 | Msa1328710 | 0.821779 | 3.367886e-53 | -8.615850e-47 |
| Msa0029310 | Msa1336710 | 0.802918 | 4.466682e-49 | -8.615850e-47 |
| Msa0029310 | Msa1346370 | 0.802044 | 6.762021e-49 | -8.615850e-47 |
| Msa0029310 | Msa1348890 | 0.809364 | 1.962361e-50 | -8.615850e-47 |
| Msa0029310 | Msa1353470 | 0.834842 | 2.371896e-56 | -8.615850e-47 |
| Msa0029310 | Msa1353980 | 0.816308 | 5.914180e-52 | -8.615850e-47 |
| Msa0029310 | Msa1359040 | 0.801482 | 8.817526e-49 | -8.615850e-47 |
| Msa0029310 | Msa1362880 | 0.807692 | 4.464007e-50 | -8.615850e-47 |
| Msa0029310 | Msa1370070 | -0.809315 | 2.010765e-50 | -8.615850e-47 |
| Msa0029310 | Msa1374470 | 0.816462 | 5.462858e-52 | -8.615850e-47 |
| Msa0029310 | Msa1375560 | 0.840915 | 6.522260e-58 | -8.615850e-47 |
| Msa0029310 | Msa1379500 | 0.838240 | 3.234853e-57 | -8.615850e-47 |
| Msa0029310 | Msa1389880 | 0.802503 | 5.439662e-49 | -8.615850e-47 |
| Msa0029310 | Msa1408010 | 0.808807 | 2.583650e-50 | -8.615850e-47 |
| Msa0029310 | Msa1408620 | -0.825399 | 4.789142e-54 | -8.615850e-47 |
| Msa0029310 | Msa1409870 | 0.806909 | 6.541440e-50 | -8.615850e-47 |
| Msa0029310 | Msa1411020 | 0.803430 | 3.499354e-49 | -8.615850e-47 |
| Msa0029310 | Msa1419370 | 0.803798 | 2.935300e-49 | -8.615850e-47 |
| Msa0029310 | Msa1423350 | 0.806858 | 6.706186e-50 | -8.615850e-47 |
| Msa0029310 | Msa1423880 | 0.819414 | 1.175898e-52 | -8.615850e-47 |
| Msa0029310 | Msa1424750 | 0.830000 | 3.756290e-55 | -8.615850e-47 |
| Msa0029310 | Msa1433390 | 0.800177 | 1.628891e-48 | -8.615850e-47 |
| Msa0029310 | Msa1454570 | 0.806255 | 8.988397e-50 | -8.615850e-47 |
| Msa0029310 | Msa1460020 | 0.806095 | 9.715409e-50 | -8.615850e-47 |
| Msa0029310 | Msa1461300 | 0.805456 | 1.323225e-49 | -8.615850e-47 |
| Msa0029310 | Msa1464810 | 0.832507 | 9.086902e-56 | -8.615850e-47 |
| Msa0029310 | Msa1466540 | 0.829962 | 3.837854e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029310 | MtrunA17_Chr1g0186081 | 97.500 | 120 | 3 | 0 | 1 | 120 | 1 | 120 | 3.25e-84 | 241 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029310 | AT1G48200.1 | 46.610 | 118 | 59 | 3 | 5 | 120 | 3 | 118 | 9.82e-25 | 91.3 |
Find 35 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGCGACTGCCGCCATTTC+TGG | 0.140183 | 1_1:+54603937 | Msa0029310:five_prime_UTR |
| CAGATCTCAGATCATTATTT+TGG | 0.170430 | 1_1:-54605323 | None:intergenic |
| AGTCTATTAGGAACACTCTT+TGG | 0.246535 | 1_1:+54604366 | Msa0029310:CDS |
| GTTTCGTTATTCAGTGAAAT+TGG | 0.261172 | 1_1:+54603869 | Msa0029310:five_prime_UTR |
| CCTAATAGACTTATTAGTTT+TGG | 0.270865 | 1_1:-54604354 | None:intergenic |
| CCAAAACTAATAAGTCTATT+AGG | 0.315405 | 1_1:+54604354 | Msa0029310:CDS |
| GCAAGGCTCTATGAAATTTA+CGG | 0.323891 | 1_1:+54604446 | Msa0029310:CDS |
| GTCTATTAGGAACACTCTTT+GGG | 0.365365 | 1_1:+54604367 | Msa0029310:CDS |
| TAGAGCCTTGCCAAGGGAAC+TGG | 0.374122 | 1_1:-54604434 | None:intergenic |
| CACAGTGATCAATGTTGGTT+TGG | 0.374270 | 1_1:+54604247 | Msa0029310:CDS |
| GAAAACTGACTTACCAGAAA+TGG | 0.387735 | 1_1:-54603950 | None:intergenic |
| ATAATGTAATTGTTTGCATA+AGG | 0.396584 | 1_1:+54605501 | Msa0029310:three_prime_UTR |
| TTAGGAACACTCTTTGGGAT+TGG | 0.416748 | 1_1:+54604372 | Msa0029310:CDS |
| CCAGAAATGGCGGCAGTCGC+TGG | 0.418221 | 1_1:-54603937 | None:intergenic |
| CTGAGATCTGAATTGCTGTC+AGG | 0.427672 | 1_1:+54605336 | Msa0029310:exon |
| TGCCGAAGCAGCGTCTGATT+CGG | 0.436762 | 1_1:+54604409 | Msa0029310:CDS |
| AGATGCTAATCCAGCTGGTC+CGG | 0.453182 | 1_1:+54605300 | Msa0029310:CDS |
| AGCCGAATCAGACGCTGCTT+CGG | 0.457423 | 1_1:-54604411 | None:intergenic |
| TGATTCGGCTCCAGTTCCCT+TGG | 0.500860 | 1_1:+54604424 | Msa0029310:CDS |
| CGGCTCCAGTTCCCTTGGCA+AGG | 0.507167 | 1_1:+54604429 | Msa0029310:CDS |
| TGAAGCTTTAGAAGCTGAGA+AGG | 0.521921 | 1_1:+54604322 | Msa0029310:CDS |
| GGATTAGCATCTTTCCTCAC+AGG | 0.533126 | 1_1:-54605289 | None:intergenic |
| TGGCAAGTAGATGTAGAACT+TGG | 0.534881 | 1_1:+54605449 | Msa0029310:three_prime_UTR |
| CAAGTAGATGTAGAACTTGG+AGG | 0.541262 | 1_1:+54605452 | Msa0029310:three_prime_UTR |
| TGAGATCTGAATTGCTGTCA+GGG | 0.552769 | 1_1:+54605337 | Msa0029310:exon |
| ACAGTGATCAATGTTGGTTT+GGG | 0.553382 | 1_1:+54604248 | Msa0029310:CDS |
| AGTAACACAGTGATCAATGT+TGG | 0.560249 | 1_1:+54604242 | Msa0029310:CDS |
| CCTCCTCAACAATCTGCACC+TGG | 0.565711 | 1_1:+54604479 | Msa0029310:CDS |
| AGGAAAGATGCTAATCCAGC+TGG | 0.568309 | 1_1:+54605295 | Msa0029310:CDS |
| CCAGGTGCAGATTGTTGAGG+AGG | 0.576080 | 1_1:-54604479 | None:intergenic |
| TGTTGCAGAGATAGAGACGA+AGG | 0.602128 | 1_1:-54603902 | None:intergenic |
| TTACCAGGTGCAGATTGTTG+AGG | 0.618119 | 1_1:-54604482 | None:intergenic |
| AATTTCATAGAGCCTTGCCA+AGG | 0.629006 | 1_1:-54604441 | None:intergenic |
| AACTGACTTACCAGAAATGG+CGG | 0.636737 | 1_1:-54603947 | None:intergenic |
| ATTTCATAGAGCCTTGCCAA+GGG | 0.656909 | 1_1:-54604440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCATATTATTTTTTCAT+TGG | + | chr1_1:54605429-54605448 | Msa0029310:three_prime_UTR | 10.0% |
| !!! | TTATCATATTATTTTTTCAT+TGG | + | chr1_1:54605429-54605448 | Msa0029310:three_prime_UTR | 10.0% |
| !! | ATTTCAAAGTATGAAAAATT+AGG | + | chr1_1:54604040-54604059 | Msa0029310:intron | 15.0% |
| !! | TTTCAAAGTATGAAAAATTA+GGG | + | chr1_1:54604041-54604060 | Msa0029310:intron | 15.0% |
| !! | GTATAATAAAATATCTAACT+TGG | - | chr1_1:54605164-54605183 | None:intergenic | 15.0% |
| !! | ATTTCAAAGTATGAAAAATT+AGG | + | chr1_1:54604040-54604059 | Msa0029310:intron | 15.0% |
| !! | TTTCAAAGTATGAAAAATTA+GGG | + | chr1_1:54604041-54604060 | Msa0029310:intron | 15.0% |
| !! | GTATAATAAAATATCTAACT+TGG | - | chr1_1:54605164-54605183 | None:intergenic | 15.0% |
| !! | AATTAGGGTTATGAAAAATT+AGG | + | chr1_1:54604056-54604075 | Msa0029310:intron | 20.0% |
| !! | CAATGATAGAAAAAACAAAA+GGG | - | chr1_1:54604130-54604149 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTTTTCTATCATT+GGG | + | chr1_1:54604129-54604148 | Msa0029310:intron | 20.0% |
| !! | AATGATTGTATGCATTTATA+TGG | + | chr1_1:54604569-54604588 | Msa0029310:intron | 20.0% |
| !!! | GATATTTTATTATACCAATC+AGG | + | chr1_1:54605169-54605188 | Msa0029310:intron | 20.0% |
| !! | ATAATGTAATTGTTTGCATA+AGG | + | chr1_1:54605501-54605520 | Msa0029310:three_prime_UTR | 20.0% |
| !! | AATTAGGGTTATGAAAAATT+AGG | + | chr1_1:54604056-54604075 | Msa0029310:intron | 20.0% |
| !! | CAATGATAGAAAAAACAAAA+GGG | - | chr1_1:54604130-54604149 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTTTTCTATCATT+GGG | + | chr1_1:54604129-54604148 | Msa0029310:intron | 20.0% |
| !! | AATGATTGTATGCATTTATA+TGG | + | chr1_1:54604569-54604588 | Msa0029310:intron | 20.0% |
| !!! | GATATTTTATTATACCAATC+AGG | + | chr1_1:54605169-54605188 | Msa0029310:intron | 20.0% |
| !! | ATAATGTAATTGTTTGCATA+AGG | + | chr1_1:54605501-54605520 | Msa0029310:three_prime_UTR | 20.0% |
| !! | TTTTCTTCAATTCTTTCATC+TGG | + | chr1_1:54603999-54604018 | Msa0029310:intron | 25.0% |
| !!! | TTTTCATACTTTGAAATGAG+CGG | - | chr1_1:54604037-54604056 | None:intergenic | 25.0% |
| ! | CCAATGATAGAAAAAACAAA+AGG | - | chr1_1:54604131-54604150 | None:intergenic | 25.0% |
| !!! | CCTTTTGTTTTTTCTATCAT+TGG | + | chr1_1:54604128-54604147 | Msa0029310:intron | 25.0% |
| ! | ATTTCAGGAGAGAAAAAAAA+TGG | + | chr1_1:54604175-54604194 | Msa0029310:intron | 25.0% |
| !!! | CCTAATAGACTTATTAGTTT+TGG | - | chr1_1:54604357-54604376 | None:intergenic | 25.0% |
| ! | CCAAAACTAATAAGTCTATT+AGG | + | chr1_1:54604354-54604373 | Msa0029310:CDS | 25.0% |
| ! | AGAGATAAAAACAAATTACC+AGG | - | chr1_1:54604500-54604519 | None:intergenic | 25.0% |
| !!! | AGGTTTCTACAATCATTTTT+CGG | + | chr1_1:54604649-54604668 | Msa0029310:intron | 25.0% |
| ! | AATTTGATGAATTGTTTGAG+AGG | + | chr1_1:54604736-54604755 | Msa0029310:intron | 25.0% |
| ! | ATTTGATGAATTGTTTGAGA+GGG | + | chr1_1:54604737-54604756 | Msa0029310:intron | 25.0% |
| ! | AAAAATTGAATTACATCTGG+AGG | - | chr1_1:54604868-54604887 | None:intergenic | 25.0% |
| !! | TCCAGATGTAATTCAATTTT+TGG | + | chr1_1:54604867-54604886 | Msa0029310:intron | 25.0% |
| !! | CCAGATGTAATTCAATTTTT+GGG | + | chr1_1:54604868-54604887 | Msa0029310:intron | 25.0% |
| ! | AAAGAACAAATAATGAGAAG+AGG | - | chr1_1:54604926-54604945 | None:intergenic | 25.0% |
| ! | CCATGTAAAAGAAATTTACA+TGG | - | chr1_1:54605101-54605120 | None:intergenic | 25.0% |
| !! | CCATGTAAATTTCTTTTACA+TGG | + | chr1_1:54605098-54605117 | Msa0029310:intron | 25.0% |
| !!! | ATAAAGTATTTTCTGAGAGT+AGG | + | chr1_1:54605392-54605411 | Msa0029310:three_prime_UTR | 25.0% |
| !! | TTTTCTTCAATTCTTTCATC+TGG | + | chr1_1:54603999-54604018 | Msa0029310:intron | 25.0% |
| !!! | TTTTCATACTTTGAAATGAG+CGG | - | chr1_1:54604037-54604056 | None:intergenic | 25.0% |
| ! | CCAATGATAGAAAAAACAAA+AGG | - | chr1_1:54604131-54604150 | None:intergenic | 25.0% |
| !!! | CCTTTTGTTTTTTCTATCAT+TGG | + | chr1_1:54604128-54604147 | Msa0029310:intron | 25.0% |
| ! | ATTTCAGGAGAGAAAAAAAA+TGG | + | chr1_1:54604175-54604194 | Msa0029310:intron | 25.0% |
| !!! | CCTAATAGACTTATTAGTTT+TGG | - | chr1_1:54604357-54604376 | None:intergenic | 25.0% |
| ! | CCAAAACTAATAAGTCTATT+AGG | + | chr1_1:54604354-54604373 | Msa0029310:CDS | 25.0% |
| ! | AGAGATAAAAACAAATTACC+AGG | - | chr1_1:54604500-54604519 | None:intergenic | 25.0% |
| !!! | AGGTTTCTACAATCATTTTT+CGG | + | chr1_1:54604649-54604668 | Msa0029310:intron | 25.0% |
| ! | AATTTGATGAATTGTTTGAG+AGG | + | chr1_1:54604736-54604755 | Msa0029310:intron | 25.0% |
| ! | ATTTGATGAATTGTTTGAGA+GGG | + | chr1_1:54604737-54604756 | Msa0029310:intron | 25.0% |
| ! | AAAAATTGAATTACATCTGG+AGG | - | chr1_1:54604868-54604887 | None:intergenic | 25.0% |
| !! | TCCAGATGTAATTCAATTTT+TGG | + | chr1_1:54604867-54604886 | Msa0029310:intron | 25.0% |
| !! | CCAGATGTAATTCAATTTTT+GGG | + | chr1_1:54604868-54604887 | Msa0029310:intron | 25.0% |
| ! | AAAGAACAAATAATGAGAAG+AGG | - | chr1_1:54604926-54604945 | None:intergenic | 25.0% |
| ! | CCATGTAAAAGAAATTTACA+TGG | - | chr1_1:54605101-54605120 | None:intergenic | 25.0% |
| !! | CCATGTAAATTTCTTTTACA+TGG | + | chr1_1:54605098-54605117 | Msa0029310:intron | 25.0% |
| !!! | ATAAAGTATTTTCTGAGAGT+AGG | + | chr1_1:54605392-54605411 | Msa0029310:three_prime_UTR | 25.0% |
| GTTTCGTTATTCAGTGAAAT+TGG | + | chr1_1:54603869-54603888 | Msa0029310:five_prime_UTR | 30.0% | |
| ! | TTTCTATCATTGGGTTGTAA+TGG | + | chr1_1:54604138-54604157 | Msa0029310:intron | 30.0% |
| ! | TTCTATCATTGGGTTGTAAT+GGG | + | chr1_1:54604139-54604158 | Msa0029310:intron | 30.0% |
| TTCTCTCCTGAAATCAAAAA+GGG | - | chr1_1:54604169-54604188 | None:intergenic | 30.0% | |
| TTTCTCTCCTGAAATCAAAA+AGG | - | chr1_1:54604170-54604189 | None:intergenic | 30.0% | |
| TAGCATTAACCAATTCAATG+AGG | + | chr1_1:54604530-54604549 | Msa0029310:intron | 30.0% | |
| TGTAAGAAACTCATTGATAG+TGG | + | chr1_1:54604824-54604843 | Msa0029310:intron | 30.0% | |
| CCCAAAAATTGAATTACATC+TGG | - | chr1_1:54604871-54604890 | None:intergenic | 30.0% | |
| ! | CAATATTTGGTTACACGTTT+TGG | - | chr1_1:54604894-54604913 | None:intergenic | 30.0% |
| CAAAACGTGTAACCAAATAT+TGG | + | chr1_1:54604892-54604911 | Msa0029310:intron | 30.0% | |
| TTTGTTCTTTGCTTTGATTG+TGG | + | chr1_1:54604936-54604955 | Msa0029310:intron | 30.0% | |
| !! | TGTGGATTTGTTATACACAT+AGG | + | chr1_1:54604954-54604973 | Msa0029310:intron | 30.0% |
| TTGTTATACACATAGGTTAC+TGG | + | chr1_1:54604961-54604980 | Msa0029310:intron | 30.0% | |
| !!! | TTCTGGTTAGTTTTGACAAA+GGG | + | chr1_1:54605056-54605075 | Msa0029310:intron | 30.0% |
| CATGGTAGTTGTTGTAAATT+TGG | - | chr1_1:54605083-54605102 | None:intergenic | 30.0% | |
| TTTACTACTGCTTTACAAGA+TGG | - | chr1_1:54605124-54605143 | None:intergenic | 30.0% | |
| ATCTTGTAAAGCAGTAGTAA+AGG | + | chr1_1:54605123-54605142 | Msa0029310:intron | 30.0% | |
| ATTATACCAATCAGGTGAAT+TGG | + | chr1_1:54605177-54605196 | Msa0029310:intron | 30.0% | |
| ATAGGTAAGAAATCATGACA+TGG | - | chr1_1:54605238-54605257 | None:intergenic | 30.0% | |
| ACCTATAATTACTTCTGTTG+TGG | + | chr1_1:54605252-54605271 | Msa0029310:intron | 30.0% | |
| ACCACAACAGAAGTAATTAT+AGG | - | chr1_1:54605256-54605275 | None:intergenic | 30.0% | |
| ! | CAGATCTCAGATCATTATTT+TGG | - | chr1_1:54605326-54605345 | None:intergenic | 30.0% |
| GTTTCGTTATTCAGTGAAAT+TGG | + | chr1_1:54603869-54603888 | Msa0029310:five_prime_UTR | 30.0% | |
| ! | TTTCTATCATTGGGTTGTAA+TGG | + | chr1_1:54604138-54604157 | Msa0029310:intron | 30.0% |
| ! | TTCTATCATTGGGTTGTAAT+GGG | + | chr1_1:54604139-54604158 | Msa0029310:intron | 30.0% |
| TTCTCTCCTGAAATCAAAAA+GGG | - | chr1_1:54604169-54604188 | None:intergenic | 30.0% | |
| TTTCTCTCCTGAAATCAAAA+AGG | - | chr1_1:54604170-54604189 | None:intergenic | 30.0% | |
| TAGCATTAACCAATTCAATG+AGG | + | chr1_1:54604530-54604549 | Msa0029310:intron | 30.0% | |
| TGTAAGAAACTCATTGATAG+TGG | + | chr1_1:54604824-54604843 | Msa0029310:intron | 30.0% | |
| CCCAAAAATTGAATTACATC+TGG | - | chr1_1:54604871-54604890 | None:intergenic | 30.0% | |
| ! | CAATATTTGGTTACACGTTT+TGG | - | chr1_1:54604894-54604913 | None:intergenic | 30.0% |
| CAAAACGTGTAACCAAATAT+TGG | + | chr1_1:54604892-54604911 | Msa0029310:intron | 30.0% | |
| TTTGTTCTTTGCTTTGATTG+TGG | + | chr1_1:54604936-54604955 | Msa0029310:intron | 30.0% | |
| !! | TGTGGATTTGTTATACACAT+AGG | + | chr1_1:54604954-54604973 | Msa0029310:intron | 30.0% |
| TTGTTATACACATAGGTTAC+TGG | + | chr1_1:54604961-54604980 | Msa0029310:intron | 30.0% | |
| !!! | TTCTGGTTAGTTTTGACAAA+GGG | + | chr1_1:54605056-54605075 | Msa0029310:intron | 30.0% |
| CATGGTAGTTGTTGTAAATT+TGG | - | chr1_1:54605083-54605102 | None:intergenic | 30.0% | |
| TTTACTACTGCTTTACAAGA+TGG | - | chr1_1:54605124-54605143 | None:intergenic | 30.0% | |
| ATCTTGTAAAGCAGTAGTAA+AGG | + | chr1_1:54605123-54605142 | Msa0029310:intron | 30.0% | |
| ATTATACCAATCAGGTGAAT+TGG | + | chr1_1:54605177-54605196 | Msa0029310:intron | 30.0% | |
| ATAGGTAAGAAATCATGACA+TGG | - | chr1_1:54605238-54605257 | None:intergenic | 30.0% | |
| ACCTATAATTACTTCTGTTG+TGG | + | chr1_1:54605252-54605271 | Msa0029310:intron | 30.0% | |
| ACCACAACAGAAGTAATTAT+AGG | - | chr1_1:54605256-54605275 | None:intergenic | 30.0% | |
| ! | CAGATCTCAGATCATTATTT+TGG | - | chr1_1:54605326-54605345 | None:intergenic | 30.0% |
| ! | GAAAACTGACTTACCAGAAA+TGG | - | chr1_1:54603953-54603972 | None:intergenic | 35.0% |
| ! | GTTGAGTTTGAAGTGATGTT+AGG | - | chr1_1:54603978-54603997 | None:intergenic | 35.0% |
| TCTCTCCTGAAATCAAAAAG+GGG | - | chr1_1:54604168-54604187 | None:intergenic | 35.0% | |
| AGTAACACAGTGATCAATGT+TGG | + | chr1_1:54604242-54604261 | Msa0029310:CDS | 35.0% | |
| !! | ACAGTGATCAATGTTGGTTT+GGG | + | chr1_1:54604248-54604267 | Msa0029310:CDS | 35.0% |
| AGTCTATTAGGAACACTCTT+TGG | + | chr1_1:54604366-54604385 | Msa0029310:CDS | 35.0% | |
| GTCTATTAGGAACACTCTTT+GGG | + | chr1_1:54604367-54604386 | Msa0029310:CDS | 35.0% | |
| GCAAGGCTCTATGAAATTTA+CGG | + | chr1_1:54604446-54604465 | Msa0029310:CDS | 35.0% | |
| TAACCAATTCAATGAGGCAA+TGG | + | chr1_1:54604536-54604555 | Msa0029310:intron | 35.0% | |
| GAGGAACAAACACCAATATT+TGG | - | chr1_1:54604907-54604926 | None:intergenic | 35.0% | |
| AGATGAGGAGCAAATAACAA+TGG | - | chr1_1:54605033-54605052 | None:intergenic | 35.0% | |
| AACTAACCAGAACAAAGATG+AGG | - | chr1_1:54605048-54605067 | None:intergenic | 35.0% | |
| !!! | GTTCTGGTTAGTTTTGACAA+AGG | + | chr1_1:54605055-54605074 | Msa0029310:intron | 35.0% |
| CAGTAGTAAAGGTTTGATGT+TGG | + | chr1_1:54605134-54605153 | Msa0029310:intron | 35.0% | |
| !!! | TCTCAGATCATTATTTTGGC+CGG | - | chr1_1:54605322-54605341 | None:intergenic | 35.0% |
| ! | TATAAGCTTTTAGCGTTGCA+AGG | + | chr1_1:54605363-54605382 | Msa0029310:three_prime_UTR | 35.0% |
| ! | GAAAACTGACTTACCAGAAA+TGG | - | chr1_1:54603953-54603972 | None:intergenic | 35.0% |
| ! | GTTGAGTTTGAAGTGATGTT+AGG | - | chr1_1:54603978-54603997 | None:intergenic | 35.0% |
| TCTCTCCTGAAATCAAAAAG+GGG | - | chr1_1:54604168-54604187 | None:intergenic | 35.0% | |
| AGTAACACAGTGATCAATGT+TGG | + | chr1_1:54604242-54604261 | Msa0029310:CDS | 35.0% | |
| !! | ACAGTGATCAATGTTGGTTT+GGG | + | chr1_1:54604248-54604267 | Msa0029310:CDS | 35.0% |
| AGTCTATTAGGAACACTCTT+TGG | + | chr1_1:54604366-54604385 | Msa0029310:CDS | 35.0% | |
| GTCTATTAGGAACACTCTTT+GGG | + | chr1_1:54604367-54604386 | Msa0029310:CDS | 35.0% | |
| GCAAGGCTCTATGAAATTTA+CGG | + | chr1_1:54604446-54604465 | Msa0029310:CDS | 35.0% | |
| TAACCAATTCAATGAGGCAA+TGG | + | chr1_1:54604536-54604555 | Msa0029310:intron | 35.0% | |
| GAGGAACAAACACCAATATT+TGG | - | chr1_1:54604907-54604926 | None:intergenic | 35.0% | |
| AGATGAGGAGCAAATAACAA+TGG | - | chr1_1:54605033-54605052 | None:intergenic | 35.0% | |
| AACTAACCAGAACAAAGATG+AGG | - | chr1_1:54605048-54605067 | None:intergenic | 35.0% | |
| !!! | GTTCTGGTTAGTTTTGACAA+AGG | + | chr1_1:54605055-54605074 | Msa0029310:intron | 35.0% |
| CAGTAGTAAAGGTTTGATGT+TGG | + | chr1_1:54605134-54605153 | Msa0029310:intron | 35.0% | |
| !!! | TCTCAGATCATTATTTTGGC+CGG | - | chr1_1:54605322-54605341 | None:intergenic | 35.0% |
| ! | TATAAGCTTTTAGCGTTGCA+AGG | + | chr1_1:54605363-54605382 | Msa0029310:three_prime_UTR | 35.0% |
| ! | AACTGACTTACCAGAAATGG+CGG | - | chr1_1:54603950-54603969 | None:intergenic | 40.0% |
| ! | CACAGTGATCAATGTTGGTT+TGG | + | chr1_1:54604247-54604266 | Msa0029310:CDS | 40.0% |
| !!! | GGTGCTGTTTTTGCAATTCT+GGG | + | chr1_1:54604269-54604288 | Msa0029310:CDS | 40.0% |
| !! | TGAAGCTTTAGAAGCTGAGA+AGG | + | chr1_1:54604322-54604341 | Msa0029310:CDS | 40.0% |
| !! | TTAGGAACACTCTTTGGGAT+TGG | + | chr1_1:54604372-54604391 | Msa0029310:CDS | 40.0% |
| ATTTCATAGAGCCTTGCCAA+GGG | - | chr1_1:54604443-54604462 | None:intergenic | 40.0% | |
| AATTTCATAGAGCCTTGCCA+AGG | - | chr1_1:54604444-54604463 | None:intergenic | 40.0% | |
| CTTCCATTGCCTCATTGAAT+TGG | - | chr1_1:54604542-54604561 | None:intergenic | 40.0% | |
| ATTCAATGAGGCAATGGAAG+TGG | + | chr1_1:54604542-54604561 | Msa0029310:intron | 40.0% | |
| ! | TCATTGCTAGCTTGCATGAT+AGG | + | chr1_1:54604629-54604648 | Msa0029310:intron | 40.0% |
| ACAACTCGCAGGAAACTATA+TGG | - | chr1_1:54604677-54604696 | None:intergenic | 40.0% | |
| TTTGCTCCTCATCTTTGTTC+TGG | + | chr1_1:54605039-54605058 | Msa0029310:intron | 40.0% | |
| GATTCACCAATTCACCTGAT+TGG | - | chr1_1:54605186-54605205 | None:intergenic | 40.0% | |
| ! | TCCACATTTTCGATGCACAA+TGG | + | chr1_1:54605204-54605223 | Msa0029310:intron | 40.0% |
| TCCATTGTGCATCGAAAATG+TGG | - | chr1_1:54605208-54605227 | None:intergenic | 40.0% | |
| ! | ACTTCTGTTGTGGTTTTTCC+AGG | + | chr1_1:54605262-54605281 | Msa0029310:intron | 40.0% |
| TGAGATCTGAATTGCTGTCA+GGG | + | chr1_1:54605337-54605356 | Msa0029310:exon | 40.0% | |
| TGGCAAGTAGATGTAGAACT+TGG | + | chr1_1:54605449-54605468 | Msa0029310:three_prime_UTR | 40.0% | |
| CAAGTAGATGTAGAACTTGG+AGG | + | chr1_1:54605452-54605471 | Msa0029310:three_prime_UTR | 40.0% | |
| ! | AACTGACTTACCAGAAATGG+CGG | - | chr1_1:54603950-54603969 | None:intergenic | 40.0% |
| ! | CACAGTGATCAATGTTGGTT+TGG | + | chr1_1:54604247-54604266 | Msa0029310:CDS | 40.0% |
| !!! | GGTGCTGTTTTTGCAATTCT+GGG | + | chr1_1:54604269-54604288 | Msa0029310:CDS | 40.0% |
| !! | TGAAGCTTTAGAAGCTGAGA+AGG | + | chr1_1:54604322-54604341 | Msa0029310:CDS | 40.0% |
| !! | TTAGGAACACTCTTTGGGAT+TGG | + | chr1_1:54604372-54604391 | Msa0029310:CDS | 40.0% |
| ATTTCATAGAGCCTTGCCAA+GGG | - | chr1_1:54604443-54604462 | None:intergenic | 40.0% | |
| AATTTCATAGAGCCTTGCCA+AGG | - | chr1_1:54604444-54604463 | None:intergenic | 40.0% | |
| CTTCCATTGCCTCATTGAAT+TGG | - | chr1_1:54604542-54604561 | None:intergenic | 40.0% | |
| ATTCAATGAGGCAATGGAAG+TGG | + | chr1_1:54604542-54604561 | Msa0029310:intron | 40.0% | |
| ! | TCATTGCTAGCTTGCATGAT+AGG | + | chr1_1:54604629-54604648 | Msa0029310:intron | 40.0% |
| ACAACTCGCAGGAAACTATA+TGG | - | chr1_1:54604677-54604696 | None:intergenic | 40.0% | |
| TTTGCTCCTCATCTTTGTTC+TGG | + | chr1_1:54605039-54605058 | Msa0029310:intron | 40.0% | |
| GATTCACCAATTCACCTGAT+TGG | - | chr1_1:54605186-54605205 | None:intergenic | 40.0% | |
| ! | TCCACATTTTCGATGCACAA+TGG | + | chr1_1:54605204-54605223 | Msa0029310:intron | 40.0% |
| TCCATTGTGCATCGAAAATG+TGG | - | chr1_1:54605208-54605227 | None:intergenic | 40.0% | |
| ! | ACTTCTGTTGTGGTTTTTCC+AGG | + | chr1_1:54605262-54605281 | Msa0029310:intron | 40.0% |
| TGAGATCTGAATTGCTGTCA+GGG | + | chr1_1:54605337-54605356 | Msa0029310:exon | 40.0% | |
| TGGCAAGTAGATGTAGAACT+TGG | + | chr1_1:54605449-54605468 | Msa0029310:three_prime_UTR | 40.0% | |
| CAAGTAGATGTAGAACTTGG+AGG | + | chr1_1:54605452-54605471 | Msa0029310:three_prime_UTR | 40.0% | |
| TGTTGCAGAGATAGAGACGA+AGG | - | chr1_1:54603905-54603924 | None:intergenic | 45.0% | |
| !!! | GGTCACCCCTTTTTGATTTC+AGG | + | chr1_1:54604160-54604179 | Msa0029310:intron | 45.0% |
| !!! | GGGTGCTGTTTTTGCAATTC+TGG | + | chr1_1:54604268-54604287 | Msa0029310:CDS | 45.0% |
| TTACCAGGTGCAGATTGTTG+AGG | - | chr1_1:54604485-54604504 | None:intergenic | 45.0% | |
| ! | AACACAAAAGCACAACTCGC+AGG | - | chr1_1:54604688-54604707 | None:intergenic | 45.0% |
| ATTACATCTGGAGGAGAGAG+CGG | - | chr1_1:54604859-54604878 | None:intergenic | 45.0% | |
| ! | TTTTTCCAGGAGATCCTGTG+AGG | + | chr1_1:54605275-54605294 | Msa0029310:intron | 45.0% |
| ! | GGATTAGCATCTTTCCTCAC+AGG | - | chr1_1:54605292-54605311 | None:intergenic | 45.0% |
| AGGAAAGATGCTAATCCAGC+TGG | + | chr1_1:54605295-54605314 | Msa0029310:CDS | 45.0% | |
| CTGAGATCTGAATTGCTGTC+AGG | + | chr1_1:54605336-54605355 | Msa0029310:exon | 45.0% | |
| TGTTGCAGAGATAGAGACGA+AGG | - | chr1_1:54603905-54603924 | None:intergenic | 45.0% | |
| !!! | GGTCACCCCTTTTTGATTTC+AGG | + | chr1_1:54604160-54604179 | Msa0029310:intron | 45.0% |
| !!! | GGGTGCTGTTTTTGCAATTC+TGG | + | chr1_1:54604268-54604287 | Msa0029310:CDS | 45.0% |
| TTACCAGGTGCAGATTGTTG+AGG | - | chr1_1:54604485-54604504 | None:intergenic | 45.0% | |
| ! | AACACAAAAGCACAACTCGC+AGG | - | chr1_1:54604688-54604707 | None:intergenic | 45.0% |
| ATTACATCTGGAGGAGAGAG+CGG | - | chr1_1:54604859-54604878 | None:intergenic | 45.0% | |
| ! | TTTTTCCAGGAGATCCTGTG+AGG | + | chr1_1:54605275-54605294 | Msa0029310:intron | 45.0% |
| ! | GGATTAGCATCTTTCCTCAC+AGG | - | chr1_1:54605292-54605311 | None:intergenic | 45.0% |
| AGGAAAGATGCTAATCCAGC+TGG | + | chr1_1:54605295-54605314 | Msa0029310:CDS | 45.0% | |
| CTGAGATCTGAATTGCTGTC+AGG | + | chr1_1:54605336-54605355 | Msa0029310:exon | 45.0% | |
| TCTTTCCTCACAGGATCTCC+TGG | - | chr1_1:54605283-54605302 | None:intergenic | 50.0% | |
| AGATGCTAATCCAGCTGGTC+CGG | + | chr1_1:54605300-54605319 | Msa0029310:CDS | 50.0% | |
| !!! | ATTATTTTGGCCGGACCAGC+TGG | - | chr1_1:54605313-54605332 | None:intergenic | 50.0% |
| TCTTTCCTCACAGGATCTCC+TGG | - | chr1_1:54605283-54605302 | None:intergenic | 50.0% | |
| AGATGCTAATCCAGCTGGTC+CGG | + | chr1_1:54605300-54605319 | Msa0029310:CDS | 50.0% | |
| !!! | ATTATTTTGGCCGGACCAGC+TGG | - | chr1_1:54605313-54605332 | None:intergenic | 50.0% |
| TGCCGAAGCAGCGTCTGATT+CGG | + | chr1_1:54604409-54604428 | Msa0029310:CDS | 55.0% | |
| AGCCGAATCAGACGCTGCTT+CGG | - | chr1_1:54604414-54604433 | None:intergenic | 55.0% | |
| ! | TGATTCGGCTCCAGTTCCCT+TGG | + | chr1_1:54604424-54604443 | Msa0029310:CDS | 55.0% |
| TAGAGCCTTGCCAAGGGAAC+TGG | - | chr1_1:54604437-54604456 | None:intergenic | 55.0% | |
| CCAGGTGCAGATTGTTGAGG+AGG | - | chr1_1:54604482-54604501 | None:intergenic | 55.0% | |
| CCTCCTCAACAATCTGCACC+TGG | + | chr1_1:54604479-54604498 | Msa0029310:CDS | 55.0% | |
| TGCCGAAGCAGCGTCTGATT+CGG | + | chr1_1:54604409-54604428 | Msa0029310:CDS | 55.0% | |
| AGCCGAATCAGACGCTGCTT+CGG | - | chr1_1:54604414-54604433 | None:intergenic | 55.0% | |
| ! | TGATTCGGCTCCAGTTCCCT+TGG | + | chr1_1:54604424-54604443 | Msa0029310:CDS | 55.0% |
| TAGAGCCTTGCCAAGGGAAC+TGG | - | chr1_1:54604437-54604456 | None:intergenic | 55.0% | |
| CCAGGTGCAGATTGTTGAGG+AGG | - | chr1_1:54604482-54604501 | None:intergenic | 55.0% | |
| CCTCCTCAACAATCTGCACC+TGG | + | chr1_1:54604479-54604498 | Msa0029310:CDS | 55.0% | |
| CCAGAAATGGCGGCAGTCGC+TGG | - | chr1_1:54603940-54603959 | None:intergenic | 65.0% | |
| CCAGCGACTGCCGCCATTTC+TGG | + | chr1_1:54603937-54603956 | Msa0029310:five_prime_UTR | 65.0% | |
| CGGCTCCAGTTCCCTTGGCA+AGG | + | chr1_1:54604429-54604448 | Msa0029310:CDS | 65.0% | |
| CCAGAAATGGCGGCAGTCGC+TGG | - | chr1_1:54603940-54603959 | None:intergenic | 65.0% | |
| CCAGCGACTGCCGCCATTTC+TGG | + | chr1_1:54603937-54603956 | Msa0029310:five_prime_UTR | 65.0% | |
| CGGCTCCAGTTCCCTTGGCA+AGG | + | chr1_1:54604429-54604448 | Msa0029310:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 54603850 | 54605543 | 54603850 | ID=Msa0029310;Name=Msa0029310 |
| chr1_1 | mRNA | 54603850 | 54605543 | 54603850 | ID=Msa0029310-mRNA-1;Parent=Msa0029310;Name=Msa0029310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=121|1|1|1|0.5|0.33|3|204|120 |
| chr1_1 | exon | 54603850 | 54603958 | 54603850 | ID=Msa0029310-mRNA-1:exon:16272;Parent=Msa0029310-mRNA-1 |
| chr1_1 | exon | 54604182 | 54604500 | 54604182 | ID=Msa0029310-mRNA-1:exon:16273;Parent=Msa0029310-mRNA-1 |
| chr1_1 | exon | 54605284 | 54605543 | 54605284 | ID=Msa0029310-mRNA-1:exon:16274;Parent=Msa0029310-mRNA-1 |
| chr1_1 | five_prime_UTR | 54603850 | 54603958 | 54603850 | ID=Msa0029310-mRNA-1:five_prime_utr;Parent=Msa0029310-mRNA-1 |
| chr1_1 | five_prime_UTR | 54604182 | 54604193 | 54604182 | ID=Msa0029310-mRNA-1:five_prime_utr;Parent=Msa0029310-mRNA-1 |
| chr1_1 | CDS | 54604194 | 54604500 | 54604194 | ID=Msa0029310-mRNA-1:cds;Parent=Msa0029310-mRNA-1 |
| chr1_1 | CDS | 54605284 | 54605339 | 54605284 | ID=Msa0029310-mRNA-1:cds;Parent=Msa0029310-mRNA-1 |
| chr1_1 | three_prime_UTR | 54605340 | 54605543 | 54605340 | ID=Msa0029310-mRNA-1:three_prime_utr;Parent=Msa0029310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
