Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591360 | CAA9893450.1 | 95.109 | 184 | 8 | 1 | 11 | 194 | 206 | 388 | 6.43e-104 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591360 | sp|P0CC47|NU2C2_CITSI | 87.204 | 211 | 24 | 2 | 11 | 218 | 207 | 417 | 1.88e-91 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095230 | Msa0591360 | 0.806531 | 7.863703e-50 | -8.615850e-47 |
| Msa0405420 | Msa0591360 | 0.851868 | 6.702674e-61 | -8.615850e-47 |
| Msa0405430 | Msa0591360 | 0.835001 | 2.162963e-56 | -8.615850e-47 |
| Msa0405440 | Msa0591360 | 0.837147 | 6.169901e-57 | -8.615850e-47 |
| Msa0405510 | Msa0591360 | 0.854947 | 8.766435e-62 | -8.615850e-47 |
| Msa0405520 | Msa0591360 | 0.837026 | 6.627371e-57 | -8.615850e-47 |
| Msa0405530 | Msa0591360 | 0.831148 | 1.967115e-55 | -8.615850e-47 |
| Msa0263770 | Msa0591360 | 0.830767 | 2.439753e-55 | -8.615850e-47 |
| Msa0268250 | Msa0591360 | 0.854267 | 1.379341e-61 | -8.615850e-47 |
| Msa0268260 | Msa0591360 | 0.840993 | 6.222012e-58 | -8.615850e-47 |
| Msa0268270 | Msa0591360 | 0.830254 | 3.256750e-55 | -8.615850e-47 |
| Msa0268300 | Msa0591360 | 0.846624 | 1.932741e-59 | -8.615850e-47 |
| Msa0268310 | Msa0591360 | 0.829728 | 4.375920e-55 | -8.615850e-47 |
| Msa0269130 | Msa0591360 | 0.867392 | 1.415397e-65 | -8.615850e-47 |
| Msa0269140 | Msa0591360 | 0.840528 | 8.237133e-58 | -8.615850e-47 |
| Msa0269150 | Msa0591360 | 0.834923 | 2.262699e-56 | -8.615850e-47 |
| Msa0591290 | Msa0591360 | 0.802947 | 4.405347e-49 | -8.615850e-47 |
| Msa0591310 | Msa0591360 | 0.904479 | 1.175507e-79 | -8.615850e-47 |
| Msa0591350 | Msa0591360 | 0.839738 | 1.324263e-57 | -8.615850e-47 |
| Msa0591360 | Msa0591380 | 0.807160 | 5.788105e-50 | -8.615850e-47 |
| Msa0591360 | Msa0867680 | 0.821337 | 4.260721e-53 | -8.615850e-47 |
| Msa0591360 | Msa0867690 | 0.837737 | 4.357192e-57 | -8.615850e-47 |
| Msa0591360 | Msa0876520 | 0.812919 | 3.327550e-51 | -8.615850e-47 |
| Msa0591360 | Msa0908220 | 0.857241 | 1.866258e-62 | -8.615850e-47 |
| Msa0591360 | Msa0908230 | 0.829332 | 5.462561e-55 | -8.615850e-47 |
| Msa0591360 | Msa0908240 | 0.814952 | 1.185103e-51 | -8.615850e-47 |
| Msa0591360 | Msa0908310 | 0.856462 | 3.165723e-62 | -8.615850e-47 |
| Msa0591360 | Msa0908320 | 0.885582 | 7.181115e-72 | -8.615850e-47 |
| Msa0591360 | Msa0908370 | 0.846542 | 2.035168e-59 | -8.615850e-47 |
| Msa0591360 | Msa0908380 | 0.859544 | 3.842930e-63 | -8.615850e-47 |
| Msa0591360 | Msa0908430 | 0.858891 | 6.034667e-63 | -8.615850e-47 |
| Msa0591360 | Msa0908440 | 0.828200 | 1.025993e-54 | -8.615850e-47 |
| Msa0591360 | Msa0908450 | 0.843475 | 1.369479e-58 | -8.615850e-47 |
| Msa0591360 | Msa0908530 | 0.848022 | 7.987437e-60 | -8.615850e-47 |
| Msa0591360 | Msa0908540 | 0.861901 | 7.403720e-64 | -8.615850e-47 |
| Msa0591360 | Msa0908590 | 0.854061 | 1.581647e-61 | -8.615850e-47 |
| Msa0591360 | Msa0908600 | 0.821782 | 3.361455e-53 | -8.615850e-47 |
| Msa0591360 | Msa0908610 | 0.804497 | 2.099930e-49 | -8.615850e-47 |
| Msa0591360 | Msa0908650 | 0.864962 | 8.336216e-65 | -8.615850e-47 |
| Msa0591360 | Msa0908660 | 0.832226 | 1.066891e-55 | -8.615850e-47 |
| Msa0591360 | Msa0908670 | 0.845751 | 3.339605e-59 | -8.615850e-47 |
| Msa0591360 | Msa0908720 | 0.835807 | 1.353164e-56 | -8.615850e-47 |
| Msa0591360 | Msa0908730 | 0.866376 | 2.983726e-65 | -8.615850e-47 |
| Msa0591360 | Msa0911190 | 0.825794 | 3.860546e-54 | -8.615850e-47 |
| Msa0591360 | Msa0911200 | 0.827959 | 1.172870e-54 | -8.615850e-47 |
| Msa0591360 | Msa0911230 | 0.814178 | 1.758636e-51 | -8.615850e-47 |
| Msa0591360 | Msa0924830 | 0.810453 | 1.143989e-50 | -8.615850e-47 |
| Msa0591360 | Msa0924930 | 0.848860 | 4.680823e-60 | -8.615850e-47 |
| Msa0591360 | Msa0924940 | 0.863477 | 2.420377e-64 | -8.615850e-47 |
| Msa0591360 | Msa0925100 | 0.833199 | 6.115852e-56 | -8.615850e-47 |
| Msa0591360 | Msa0925110 | 0.861257 | 1.164941e-63 | -8.615850e-47 |
| Msa0591360 | Msa0983630 | 0.836842 | 7.381102e-57 | -8.615850e-47 |
| Msa0591360 | Msa0983640 | 0.848092 | 7.639299e-60 | -8.615850e-47 |
| Msa0591360 | Msa1022050 | 0.825147 | 5.491321e-54 | -8.615850e-47 |
| Msa0591360 | Msa1022060 | 0.847872 | 8.784594e-60 | -8.615850e-47 |
| Msa0591360 | Msa1086550 | 0.858226 | 9.529240e-63 | -8.615850e-47 |
| Msa0591360 | Msa1086590 | 0.809130 | 2.203082e-50 | -8.615850e-47 |
| Msa0591360 | Msa1086600 | 0.882533 | 9.621317e-71 | -8.615850e-47 |
| Msa0591360 | Msa1086720 | 0.850791 | 1.351501e-60 | -8.615850e-47 |
| Msa0591360 | Msa1086730 | 0.824280 | 8.794830e-54 | -8.615850e-47 |
| Msa0591360 | Msa1086740 | 0.838684 | 2.484563e-57 | -8.615850e-47 |
| Msa0591360 | Msa1086790 | 0.837813 | 4.164192e-57 | -8.615850e-47 |
| Msa0591360 | Msa1086800 | 0.847221 | 1.326275e-59 | -8.615850e-47 |
| Msa0591360 | Msa1086960 | 0.845591 | 3.691877e-59 | -8.615850e-47 |
| Msa0591360 | Msa1086970 | 0.846241 | 2.458489e-59 | -8.615850e-47 |
| Msa0591360 | Msa1087030 | 0.855418 | 6.395887e-62 | -8.615850e-47 |
| Msa0591360 | Msa1087040 | 0.843070 | 1.756508e-58 | -8.615850e-47 |
| Msa0591360 | Msa1087050 | 0.838688 | 2.479123e-57 | -8.615850e-47 |
| Msa0591360 | Msa1087110 | 0.838765 | 2.367836e-57 | -8.615850e-47 |
| Msa0591360 | Msa1087120 | 0.830370 | 3.050888e-55 | -8.615850e-47 |
| Msa0591360 | Msa1354420 | 0.840379 | 9.011419e-58 | -8.615850e-47 |
| Msa0591360 | Msa1354430 | 0.861770 | 8.122254e-64 | -8.615850e-47 |
| Msa0591360 | Msa1354480 | 0.867232 | 1.593002e-65 | -8.615850e-47 |
| Msa0591360 | Msa1354490 | 0.843584 | 1.280773e-58 | -8.615850e-47 |
| Msa0591360 | Msa1354500 | 0.835701 | 1.439486e-56 | -8.615850e-47 |
| Msa0591360 | Msa1354550 | 0.848213 | 7.072606e-60 | -8.615850e-47 |
| Msa0591360 | Msa1354560 | 0.858215 | 9.602542e-63 | -8.615850e-47 |
| Msa0591360 | Msa1354610 | 0.876532 | 1.295309e-68 | -8.615850e-47 |
| Msa0591360 | Msa1354620 | 0.834981 | 2.187949e-56 | -8.615850e-47 |
| Msa0591360 | Msa1354630 | 0.850937 | 1.229145e-60 | -8.615850e-47 |
| Msa0591360 | Msa1354680 | 0.834254 | 3.332920e-56 | -8.615850e-47 |
| Msa0591360 | Msa1354690 | 0.821758 | 3.405530e-53 | -8.615850e-47 |
| Msa0591360 | Msa1354700 | 0.853113 | 2.960735e-61 | -8.615850e-47 |
| Msa0591360 | Msa1354740 | 0.863420 | 2.521005e-64 | -8.615850e-47 |
| Msa0591360 | Msa1354750 | 0.837497 | 5.019546e-57 | -8.615850e-47 |
| Msa0591360 | Msa1354760 | 0.840563 | 8.064894e-58 | -8.615850e-47 |
| Msa0591360 | Msa1354810 | 0.833925 | 4.030300e-56 | -8.615850e-47 |
| Msa0591360 | Msa1354820 | 0.864736 | 9.812337e-65 | -8.615850e-47 |
| Msa0591360 | Msa1354980 | 0.843683 | 1.205271e-58 | -8.615850e-47 |
| Msa0591360 | Msa1354990 | 0.860508 | 1.967705e-63 | -8.615850e-47 |
| Msa0591360 | Msa1365890 | 0.834577 | 2.765195e-56 | -8.615850e-47 |
| Msa0591360 | Msa1365900 | 0.834218 | 3.402792e-56 | -8.615850e-47 |
| Msa0591360 | Msa1365950 | 0.864903 | 8.694151e-65 | -8.615850e-47 |
| Msa0591360 | Msa1365960 | 0.824333 | 8.546012e-54 | -8.615850e-47 |
| Msa0591360 | Msa1365970 | 0.828645 | 8.013299e-55 | -8.615850e-47 |
| Msa0591360 | Msa1366080 | 0.838504 | 2.765794e-57 | -8.615850e-47 |
| Msa0591360 | Msa1366090 | 0.824485 | 7.869366e-54 | -8.615850e-47 |
| Msa0591360 | Msa1368230 | 0.812531 | 4.044904e-51 | -8.615850e-47 |
| Msa0591360 | Msa1368240 | 0.849155 | 3.877127e-60 | -8.615850e-47 |
| Msa0591360 | Msa1385410 | 0.821410 | 4.097210e-53 | -8.615850e-47 |
| Msa0591360 | Msa1385420 | 0.827334 | 1.656701e-54 | -8.615850e-47 |
| Msa0591360 | Msa1391090 | 0.840677 | 7.528800e-58 | -8.615850e-47 |
| Msa0591360 | Msa1391100 | 0.828913 | 6.903092e-55 | -8.615850e-47 |
| Msa0591360 | Msa1391110 | 0.845731 | 3.382606e-59 | -8.615850e-47 |
| Msa0591360 | Msa1391160 | 0.841641 | 4.201926e-58 | -8.615850e-47 |
| Msa0591360 | Msa1391170 | 0.845685 | 3.481453e-59 | -8.615850e-47 |
| Msa0591360 | Msa1391220 | 0.853759 | 1.932709e-61 | -8.615850e-47 |
| Msa0591360 | Msa1391230 | 0.817577 | 3.067945e-52 | -8.615850e-47 |
| Msa0591360 | Msa1391240 | 0.836369 | 9.741008e-57 | -8.615850e-47 |
| Msa0591360 | Msa1394030 | 0.806816 | 6.844572e-50 | -8.615850e-47 |
| Msa0591360 | Msa1460120 | 0.828652 | 7.981993e-55 | -8.615850e-47 |
| Msa0591360 | Msa1460130 | 0.830722 | 2.501874e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591360 | MtrunA17_CPg0492451 | 98.198 | 111 | 2 | 0 | 108 | 218 | 1 | 111 | 1.66e-70 | 214 |
| Msa0591360 | MtrunA17_Chr4g0016071 | 98.198 | 111 | 2 | 0 | 108 | 218 | 1 | 111 | 1.66e-70 | 214 |
| Msa0591360 | MtrunA17_Chr3g0090871 | 97.248 | 109 | 3 | 0 | 108 | 216 | 1 | 109 | 1.08e-69 | 212 |
| Msa0591360 | MtrunA17_Chr1g0195541 | 93.333 | 60 | 4 | 0 | 6 | 65 | 79 | 138 | 6.90e-33 | 117 |
| Msa0591360 | MtrunA17_CPg0492431 | 93.333 | 60 | 4 | 0 | 6 | 65 | 184 | 243 | 1.17e-31 | 117 |
| Msa0591360 | MtrunA17_Chr3g0090851 | 93.333 | 60 | 4 | 0 | 6 | 65 | 184 | 243 | 1.17e-31 | 117 |
| Msa0591360 | MtrunA17_Chr4g0016091 | 93.333 | 60 | 4 | 0 | 6 | 65 | 184 | 243 | 1.17e-31 | 117 |
| Msa0591360 | MtrunA17_Chr1g0153231 | 80.000 | 60 | 12 | 0 | 6 | 65 | 22 | 81 | 1.51e-27 | 100 |
| Msa0591360 | MtrunA17_Chr0c03g0489881 | 34.146 | 164 | 105 | 3 | 56 | 218 | 2 | 163 | 7.36e-17 | 76.3 |
| Msa0591360 | MtrunA17_MTg0491931 | 34.146 | 164 | 105 | 3 | 56 | 218 | 2 | 163 | 7.36e-17 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591360 | ATCG00890.1 | 85.782 | 211 | 27 | 2 | 11 | 218 | 84 | 294 | 5.78e-93 | 278 |
| Msa0591360 | ATCG01250.1 | 85.782 | 211 | 27 | 2 | 11 | 218 | 84 | 294 | 5.78e-93 | 278 |
| Msa0591360 | AT2G07689.1 | 33.939 | 165 | 104 | 4 | 56 | 218 | 2 | 163 | 9.17e-18 | 79.3 |
Find 55 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGGAAAACTTCATTTAT+TGG | 0.187851 | 4_2:+15615891 | Msa0591360:CDS |
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | 4_2:+15615639 | Msa0591360:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | 4_2:+15614551 | None:intergenic |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | 4_2:+15615555 | Msa0591360:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | 4_2:+15615744 | Msa0591360:CDS |
| ATATTCATCACTGTAGGAAT+TGG | 0.280413 | 4_2:+15614663 | Msa0591360:CDS |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | 4_2:+15615556 | Msa0591360:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | 4_2:+15615624 | Msa0591360:CDS |
| GCAAGCAGGCCTATATTTCT+TGG | 0.316441 | 4_2:+15615922 | Msa0591360:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | 4_2:-15615596 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | 4_2:+15614543 | None:intergenic |
| TTCGTTTGATGAGAAATAAA+AGG | 0.356199 | 4_2:-15615508 | None:intergenic |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | 4_2:-15615595 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | 4_2:+15615651 | Msa0591360:CDS |
| CTATATTTCTTGGTTTCAAT+AGG | 0.375317 | 4_2:+15615932 | Msa0591360:CDS |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | 4_2:+15614697 | Msa0591360:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | 4_2:+15615756 | Msa0591360:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | 4_2:+15614664 | Msa0591360:CDS |
| TCTTGGCTATATGGTTCGTC+CGG | 0.418558 | 4_2:+15614560 | Msa0591360:CDS |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | 4_2:-15615631 | None:intergenic |
| CTATTGAAACCAAGAAATAT+AGG | 0.436794 | 4_2:-15615931 | None:intergenic |
| GCCCTATGTCTATTATCCTT+AGG | 0.440840 | 4_2:+15615843 | Msa0591360:CDS |
| GGAGGTCTTCCTCCACTAGC+AGG | 0.443104 | 4_2:+15615864 | Msa0591360:CDS |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | 4_2:-15615727 | None:intergenic |
| ACTTCATTTATTGGTGTGGA+TGG | 0.460797 | 4_2:+15615900 | Msa0591360:CDS |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | 4_2:+15615717 | Msa0591360:CDS |
| TATTGGTGTGGATGGCAAGC+AGG | 0.476501 | 4_2:+15615908 | Msa0591360:CDS |
| ATAAGCGCAATTGAAATTCC+AGG | 0.496050 | 4_2:-15614642 | None:intergenic |
| TCTTGAAGCTCTATCTCTCC+CGG | 0.509971 | 4_2:-15614579 | None:intergenic |
| CGCACTCCTTCATATACGTC+AGG | 0.510042 | 4_2:-15614723 | None:intergenic |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | 4_2:-15614698 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | 4_2:+15615615 | Msa0591360:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | 4_2:+15615511 | Msa0591360:CDS |
| GAAAACTTCATTTATTGGTG+TGG | 0.528021 | 4_2:+15615896 | Msa0591360:CDS |
| ACACAAATGTATAACTCCCC+TGG | 0.530663 | 4_2:+15614624 | Msa0591360:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | 4_2:+15615783 | Msa0591360:CDS |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | 4_2:-15614704 | None:intergenic |
| GAGCTTCAAGAAATAGTGAA+TGG | 0.546870 | 4_2:+15614591 | Msa0591360:CDS |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | 4_2:+15615663 | Msa0591360:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | 4_2:-15614705 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | 4_2:-15614697 | None:intergenic |
| TCCTAAGGATAATAGACATA+GGG | 0.556597 | 4_2:-15615844 | None:intergenic |
| CTCCTAAGGATAATAGACAT+AGG | 0.558738 | 4_2:-15615845 | None:intergenic |
| CTTGGCTATATGGTTCGTCC+GGG | 0.560104 | 4_2:+15614561 | Msa0591360:CDS |
| TAAGCGCAATTGAAATTCCA+GGG | 0.565360 | 4_2:-15614641 | None:intergenic |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | 4_2:-15615551 | None:intergenic |
| TAGTGGAGGAAGACCTCCTA+AGG | 0.577052 | 4_2:-15615859 | None:intergenic |
| TGGACTCCTGACGTATATGA+AGG | 0.588163 | 4_2:+15614717 | Msa0591360:CDS |
| CTATGTCTATTATCCTTAGG+AGG | 0.590927 | 4_2:+15615846 | Msa0591360:CDS |
| GCGCTTATATTCATCACTGT+AGG | 0.594447 | 4_2:+15614657 | Msa0591360:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | 4_2:+15615666 | Msa0591360:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | 4_2:-15614703 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | 4_2:-15615488 | None:intergenic |
| CTGACGTATATGAAGGAGTG+CGG | 0.702764 | 4_2:+15614724 | Msa0591360:CDS |
| AAGCGCAATTGAAATTCCAG+GGG | 0.720091 | 4_2:-15614640 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | chr4_2:15614861-15614880 | Msa0591360:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | chr4_2:15615174-15615193 | Msa0591360:intron | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | chr4_2:15614861-15614880 | Msa0591360:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | chr4_2:15615174-15615193 | Msa0591360:intron | 15.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | chr4_2:15614930-15614949 | Msa0591360:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | chr4_2:15615251-15615270 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | chr4_2:15615251-15615270 | Msa0591360:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | chr4_2:15615639-15615658 | Msa0591360:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | chr4_2:15615651-15615670 | Msa0591360:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | chr4_2:15614930-15614949 | Msa0591360:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | chr4_2:15615251-15615270 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | chr4_2:15615251-15615270 | Msa0591360:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | chr4_2:15615639-15615658 | Msa0591360:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | chr4_2:15615651-15615670 | Msa0591360:CDS | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | chr4_2:15614790-15614809 | Msa0591360:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | chr4_2:15614849-15614868 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | chr4_2:15614931-15614950 | Msa0591360:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | chr4_2:15614962-15614981 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | chr4_2:15614990-15615009 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | chr4_2:15615257-15615276 | Msa0591360:intron | 25.0% |
| ! | TTCGTTTGATGAGAAATAAA+AGG | - | chr4_2:15615511-15615530 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | chr4_2:15615511-15615530 | Msa0591360:CDS | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | + | chr4_2:15615809-15615828 | Msa0591360:CDS | 25.0% |
| ! | TTTCGGAAAACTTCATTTAT+TGG | + | chr4_2:15615891-15615910 | Msa0591360:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | - | chr4_2:15615934-15615953 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | chr4_2:15614790-15614809 | Msa0591360:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | chr4_2:15614849-15614868 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | chr4_2:15614931-15614950 | Msa0591360:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | chr4_2:15614962-15614981 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | chr4_2:15614990-15615009 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | chr4_2:15615257-15615276 | Msa0591360:intron | 25.0% |
| ! | TTCGTTTGATGAGAAATAAA+AGG | - | chr4_2:15615511-15615530 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | chr4_2:15615511-15615530 | Msa0591360:CDS | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | + | chr4_2:15615809-15615828 | Msa0591360:CDS | 25.0% |
| ! | TTTCGGAAAACTTCATTTAT+TGG | + | chr4_2:15615891-15615910 | Msa0591360:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | - | chr4_2:15615934-15615953 | None:intergenic | 25.0% |
| ATATTCATCACTGTAGGAAT+TGG | + | chr4_2:15614663-15614682 | Msa0591360:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | chr4_2:15614664-15614683 | Msa0591360:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | chr4_2:15614771-15614790 | Msa0591360:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | chr4_2:15615036-15615055 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | chr4_2:15615036-15615055 | Msa0591360:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | chr4_2:15615136-15615155 | Msa0591360:intron | 30.0% |
| GTGATAAAAGAGAAGAAGAT+TGG | - | chr4_2:15615326-15615345 | None:intergenic | 30.0% | |
| ! | CTTCTTCTCTTTTATCACTT+AGG | + | chr4_2:15615328-15615347 | Msa0591360:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | chr4_2:15615556-15615575 | Msa0591360:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | chr4_2:15615634-15615653 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | chr4_2:15615663-15615682 | Msa0591360:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | chr4_2:15615717-15615736 | Msa0591360:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | chr4_2:15615744-15615763 | Msa0591360:CDS | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | - | chr4_2:15615847-15615866 | None:intergenic | 30.0% | |
| GAAAACTTCATTTATTGGTG+TGG | + | chr4_2:15615896-15615915 | Msa0591360:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | chr4_2:15614663-15614682 | Msa0591360:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | chr4_2:15614664-15614683 | Msa0591360:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | chr4_2:15614771-15614790 | Msa0591360:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | chr4_2:15615036-15615055 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | chr4_2:15615036-15615055 | Msa0591360:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | chr4_2:15615136-15615155 | Msa0591360:intron | 30.0% |
| GTGATAAAAGAGAAGAAGAT+TGG | - | chr4_2:15615326-15615345 | None:intergenic | 30.0% | |
| ! | CTTCTTCTCTTTTATCACTT+AGG | + | chr4_2:15615328-15615347 | Msa0591360:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | chr4_2:15615556-15615575 | Msa0591360:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | chr4_2:15615634-15615653 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | chr4_2:15615663-15615682 | Msa0591360:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | chr4_2:15615717-15615736 | Msa0591360:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | chr4_2:15615744-15615763 | Msa0591360:CDS | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | - | chr4_2:15615847-15615866 | None:intergenic | 30.0% | |
| GAAAACTTCATTTATTGGTG+TGG | + | chr4_2:15615896-15615915 | Msa0591360:CDS | 30.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | chr4_2:15614591-15614610 | Msa0591360:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | chr4_2:15614644-15614663 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | chr4_2:15614645-15614664 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | chr4_2:15614765-15614784 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | chr4_2:15614769-15614788 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | chr4_2:15614903-15614922 | Msa0591360:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | chr4_2:15614913-15614932 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | chr4_2:15614938-15614957 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | chr4_2:15615003-15615022 | Msa0591360:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | chr4_2:15615108-15615127 | Msa0591360:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | chr4_2:15615144-15615163 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | chr4_2:15615145-15615164 | Msa0591360:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | chr4_2:15615164-15615183 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | chr4_2:15615383-15615402 | Msa0591360:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | chr4_2:15615491-15615510 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | chr4_2:15615554-15615573 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | chr4_2:15615555-15615574 | Msa0591360:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | chr4_2:15615598-15615617 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | chr4_2:15615624-15615643 | Msa0591360:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | chr4_2:15615730-15615749 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | chr4_2:15615783-15615802 | Msa0591360:CDS | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | - | chr4_2:15615848-15615867 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | + | chr4_2:15615846-15615865 | Msa0591360:CDS | 35.0% | |
| ACTTCATTTATTGGTGTGGA+TGG | + | chr4_2:15615900-15615919 | Msa0591360:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | chr4_2:15614591-15614610 | Msa0591360:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | chr4_2:15614644-15614663 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | chr4_2:15614645-15614664 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | chr4_2:15614765-15614784 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | chr4_2:15614769-15614788 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | chr4_2:15614903-15614922 | Msa0591360:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | chr4_2:15614913-15614932 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | chr4_2:15614938-15614957 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | chr4_2:15615003-15615022 | Msa0591360:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | chr4_2:15615108-15615127 | Msa0591360:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | chr4_2:15615144-15615163 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | chr4_2:15615145-15615164 | Msa0591360:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | chr4_2:15615164-15615183 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | chr4_2:15615383-15615402 | Msa0591360:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | chr4_2:15615491-15615510 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | chr4_2:15615554-15615573 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | chr4_2:15615555-15615574 | Msa0591360:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | chr4_2:15615598-15615617 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | chr4_2:15615624-15615643 | Msa0591360:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | chr4_2:15615730-15615749 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | chr4_2:15615783-15615802 | Msa0591360:CDS | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | - | chr4_2:15615848-15615867 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | + | chr4_2:15615846-15615865 | Msa0591360:CDS | 35.0% | |
| ACTTCATTTATTGGTGTGGA+TGG | + | chr4_2:15615900-15615919 | Msa0591360:CDS | 35.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | chr4_2:15614624-15614643 | Msa0591360:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | chr4_2:15614643-15614662 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | chr4_2:15614657-15614676 | Msa0591360:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | chr4_2:15614876-15614895 | Msa0591360:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | chr4_2:15614904-15614923 | Msa0591360:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | chr4_2:15614912-15614931 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | chr4_2:15615067-15615086 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | chr4_2:15615085-15615104 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | chr4_2:15615086-15615105 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | chr4_2:15615197-15615216 | Msa0591360:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | chr4_2:15615216-15615235 | Msa0591360:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | chr4_2:15615222-15615241 | Msa0591360:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | chr4_2:15615226-15615245 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | chr4_2:15615439-15615458 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | chr4_2:15615599-15615618 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | chr4_2:15615615-15615634 | Msa0591360:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | chr4_2:15615666-15615685 | Msa0591360:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | chr4_2:15615756-15615775 | Msa0591360:CDS | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | - | chr4_2:15615825-15615844 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | + | chr4_2:15615843-15615862 | Msa0591360:CDS | 40.0% | |
| !!! | CTCCACTAGCAGGTTTTTTT+CGG | + | chr4_2:15615874-15615893 | Msa0591360:CDS | 40.0% |
| TTCCGAAAAAAACCTGCTAG+TGG | - | chr4_2:15615879-15615898 | None:intergenic | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | chr4_2:15614624-15614643 | Msa0591360:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | chr4_2:15614643-15614662 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | chr4_2:15614657-15614676 | Msa0591360:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | chr4_2:15614876-15614895 | Msa0591360:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | chr4_2:15614904-15614923 | Msa0591360:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | chr4_2:15614912-15614931 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | chr4_2:15615067-15615086 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | chr4_2:15615085-15615104 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | chr4_2:15615086-15615105 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | chr4_2:15615197-15615216 | Msa0591360:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | chr4_2:15615216-15615235 | Msa0591360:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | chr4_2:15615222-15615241 | Msa0591360:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | chr4_2:15615226-15615245 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | chr4_2:15615439-15615458 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | chr4_2:15615599-15615618 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | chr4_2:15615615-15615634 | Msa0591360:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | chr4_2:15615666-15615685 | Msa0591360:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | chr4_2:15615756-15615775 | Msa0591360:CDS | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | - | chr4_2:15615825-15615844 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | + | chr4_2:15615843-15615862 | Msa0591360:CDS | 40.0% | |
| !!! | CTCCACTAGCAGGTTTTTTT+CGG | + | chr4_2:15615874-15615893 | Msa0591360:CDS | 40.0% |
| TTCCGAAAAAAACCTGCTAG+TGG | - | chr4_2:15615879-15615898 | None:intergenic | 40.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | chr4_2:15614560-15614579 | Msa0591360:CDS | 45.0% | |
| TCTTGAAGCTCTATCTCTCC+CGG | - | chr4_2:15614582-15614601 | None:intergenic | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | chr4_2:15614706-15614725 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | chr4_2:15614707-15614726 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | chr4_2:15614708-15614727 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | chr4_2:15614717-15614736 | Msa0591360:CDS | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | chr4_2:15614724-15614743 | Msa0591360:CDS | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | chr4_2:15614822-15614841 | Msa0591360:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | chr4_2:15614839-15614858 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | chr4_2:15614840-15614859 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | chr4_2:15614891-15614910 | Msa0591360:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | chr4_2:15615055-15615074 | Msa0591360:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | chr4_2:15615210-15615229 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | chr4_2:15615275-15615294 | Msa0591360:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | chr4_2:15615279-15615298 | Msa0591360:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | chr4_2:15615356-15615375 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | chr4_2:15615358-15615377 | Msa0591360:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | chr4_2:15615433-15615452 | None:intergenic | 45.0% | |
| CGAAAAAAACCTGCTAGTGG+AGG | - | chr4_2:15615876-15615895 | None:intergenic | 45.0% | |
| GCAAGCAGGCCTATATTTCT+TGG | + | chr4_2:15615922-15615941 | Msa0591360:CDS | 45.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | chr4_2:15614560-15614579 | Msa0591360:CDS | 45.0% | |
| TCTTGAAGCTCTATCTCTCC+CGG | - | chr4_2:15614582-15614601 | None:intergenic | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | chr4_2:15614706-15614725 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | chr4_2:15614707-15614726 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | chr4_2:15614708-15614727 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | chr4_2:15614717-15614736 | Msa0591360:CDS | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | chr4_2:15614724-15614743 | Msa0591360:CDS | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | chr4_2:15614822-15614841 | Msa0591360:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | chr4_2:15614839-15614858 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | chr4_2:15614840-15614859 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | chr4_2:15614891-15614910 | Msa0591360:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | chr4_2:15615055-15615074 | Msa0591360:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | chr4_2:15615210-15615229 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | chr4_2:15615275-15615294 | Msa0591360:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | chr4_2:15615279-15615298 | Msa0591360:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | chr4_2:15615356-15615375 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | chr4_2:15615358-15615377 | Msa0591360:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | chr4_2:15615433-15615452 | None:intergenic | 45.0% | |
| CGAAAAAAACCTGCTAGTGG+AGG | - | chr4_2:15615876-15615895 | None:intergenic | 45.0% | |
| GCAAGCAGGCCTATATTTCT+TGG | + | chr4_2:15615922-15615941 | Msa0591360:CDS | 45.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | chr4_2:15614561-15614580 | Msa0591360:CDS | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | chr4_2:15614700-15614719 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | chr4_2:15614701-15614720 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | chr4_2:15614726-15614745 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | chr4_2:15615156-15615175 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | chr4_2:15615412-15615431 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | - | chr4_2:15615862-15615881 | None:intergenic | 50.0% | |
| TATTGGTGTGGATGGCAAGC+AGG | + | chr4_2:15615908-15615927 | Msa0591360:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | chr4_2:15614561-15614580 | Msa0591360:CDS | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | chr4_2:15614700-15614719 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | chr4_2:15614701-15614720 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | chr4_2:15614726-15614745 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | chr4_2:15615156-15615175 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | chr4_2:15615412-15615431 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | - | chr4_2:15615862-15615881 | None:intergenic | 50.0% | |
| TATTGGTGTGGATGGCAAGC+AGG | + | chr4_2:15615908-15615927 | Msa0591360:CDS | 50.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | chr4_2:15614697-15614716 | Msa0591360:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | chr4_2:15614697-15614716 | Msa0591360:CDS | 55.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | + | chr4_2:15615864-15615883 | Msa0591360:CDS | 60.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | + | chr4_2:15615864-15615883 | Msa0591360:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 15614552 | 15615953 | 15614552 | ID=Msa0591360;Name=Msa0591360 |
| chr4_2 | mRNA | 15614552 | 15615953 | 15614552 | ID=Msa0591360-mRNA-1;Parent=Msa0591360;Name=Msa0591360-mRNA-1;_AED=0.87;_eAED=0.90;_QI=0|0|0|0.5|1|1|2|0|235 |
| chr4_2 | exon | 15614552 | 15614745 | 15614552 | ID=Msa0591360-mRNA-1:exon:4502;Parent=Msa0591360-mRNA-1 |
| chr4_2 | exon | 15615440 | 15615953 | 15615440 | ID=Msa0591360-mRNA-1:exon:4503;Parent=Msa0591360-mRNA-1 |
| chr4_2 | CDS | 15614552 | 15614745 | 15614552 | ID=Msa0591360-mRNA-1:cds;Parent=Msa0591360-mRNA-1 |
| chr4_2 | CDS | 15615440 | 15615953 | 15615440 | ID=Msa0591360-mRNA-1:cds;Parent=Msa0591360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
